query gene name (TIR1.nx02): global / partial tree
File name:
165 aa residues 70 OTU included.
Results of partial trees included / Partial tree including Ppa.
Assemble Job Id:
Tree job id: ayKL6X
BP values out of 100
Analyzed by shino@nibb.ac.jp
Date: Thu Jun 22 17:21:48 JST 2006
XP_793918 Strongylocentrotus purpuratus PREDICTED: similar to F-box and leucine-rich repeat protein 20
XP_908119 Mus musculus XP_928587 PREDICTED: F-box protein FBL2 isoform 3/PREDICTED: similar to F-box and leucine-rich repeat protein 20 isoform 12
AAH77969 Xenopus laevis MGC81000 protein
100
CAG10004 Tetraodon nigroviridis unnamed protein product
CAG33402 Homo sapiens FBXL2
AAF04510 Homo sapiens F-box protein Fbl2
51
NP_036289 Homo sapiens Q9UKC9 AAD56248 AAF03128 AAH31556 CAH93518 Pongo pygmaeus F-box and leucine-rich repeat protein 2/FBXL2_HUMAN F-box/LRR-repeat protein 2 (F-box and leucine-rich repeat protein 2) (F-box protein FBL2/FBL3)/leucine-rich repeats
58
BAA91691 Homo sapiens unnamed protein product
61
NP_848739 Mus musculus Q8BH16 BAC30203 BAC32477 BAC41033 AAH96582 BAE24574 BAE37357 F-box and leucine-rich repeat protein 2/FBXL2_MOUSE F-box/LRR-repeat protein 2 (F-box and leucine-rich repeat protein 2)/unnamed protein product /unnamed protein prod
XP_343496 Rattus norvegicus PREDICTED: similar to F-box and leucine-rich repeat protein 2
7736
XP_542692 Canis familiaris PREDICTED: similar to F-box and leucine-rich repeat protein 2
XP_873270 Bos taurus PREDICTED: similar to F-box and leucine-rich repeat protein 2
3510083100
AT3G07550 = NP_850534 NP_566312 AAF02159 BAC43510 AAP40357 ubiquitin-protein ligase/ubiquitin-protein ligase /unknown protein /unknown protein /putative F-box protein family, AtFBL12
AT5G23340 = NP_197725 BAB11189 AAL06927 AAM91352 unknown protein/unnamed protein product /AT5g23340/MKD15_20 /At5g23340/MKD15_20
AT5G01720 = NP_568094 AAM14053 AAM67471 ubiquitin-protein ligase/putative F-box protein family, AtFBL3 /putative F-box family protein AtFBL3
ABA91133 Oryza sativa (japonica cultivar-group) ABA96188 ABA96189 F-box family protein AtFBL3, putative/F-box family protein AtFBL3, putative /F-box family protein AtFBL3, putative
97
AT5G27920 = NP_568502 BAC41915 AAO64875 ubiquitin-protein ligase/unknown protein /At5g27920
ABA99529 Oryza sativa (japonica cultivar-group) hypothetical protein LOC_Os12g36670
9456
Smo_TIR1_37_1
Smo_TIR1_33_1
Smo_TIR1_35_1
1008934
Smo_TIR1_51_1
10039
ABA95013 Oryza sativa (japonica cultivar-group) F-box protein family, AtFBL4
Smo_TIR1_17_1
AAM60829 Arabidopsis thaliana F-box protein family, AtFBL4
AT4G15475 = NP_567467 AAK26038 AAK32821 AAL07187 ubiquitin-protein ligase/putative F-box protein family, AtFBL4 /AT4g15470/dl3775w /putative F-box protein family protein FBL4
100861004226
AT3G62980 = NP_567135 Q570C0 AAB69175 AAB69176 CAB87743 AAN71945 TIR1 (TRANSPORT INHIBITOR RESPONSE 1); ubiquitin-protein ligase/TIR1_ARATH TRANSPORT INHIBITOR RESPONSE 1 protein (F-box/LRR-repeat protein 1) /transport inhibitor response 1 /transpor
AAK76473 Arabidopsis thaliana putative F-box protein GRR1 protein 1, AtFBL18
AT4G03190 = NP_567255 AAD14447 CAB77804 AAN12969 GRH1 (GRR1-LIKE PROTEIN 1); ubiquitin-protein ligase/putative homolog of transport inhibitor response 1 /putative homolog of transport inhibitor response 1 /putative F-box protein AtFBL18
10091
XP_493919 Oryza sativa (japonica cultivar-group) AAV32196 similar to Arabidopsis thaliana transport inhibitor response 1 (TIR1) (T48087)/putative transport inhibitor response TIR1
98
ABA93930 Oryza sativa (japonica cultivar-group) F-box domain, putative
AT1G12820 = NP_563915 AAF78487 AAM20393 AAN72129 IPS1; ubiquitin-protein ligase/Strong similarity to transport inhibitor response 1 (TIR1) from Arabidopsis thaliana gb|AF005047 /transport inhibitor response 1, putative /transport inhibitor response
AT3G26810 = NP_566800 BAB01228 AAL32646 AAQ56839 ubiquitin-protein ligase/transport inhibitor response-like protein /transport inhibitor response-like protein /At3g26830
100
XP_472325 Oryza sativa (japonica cultivar-group) CAD40545 OSJNBa0072K14.18/OSJNBa0072K14.18
618182
NP_912552 Oryza sativa (japonica cultivar-group) AAN64135 Putative F-box containing protein TIR1/Putative F-box containing protein TIR1
ABA93466 Oryza sativa (japonica cultivar-group) Leucine Rich Repeat, putative
XP_507533 Oryza sativa (japonica cultivar-group) XP_506986 XP_467901 BAD19396 PREDICTED OJ1175_B01.8-1 gene product/PREDICTED OJ1175_B01.8-1 gene product /putative F-box containing protein TIR1 /putative F-box containing protein TIR1
61
AT4G24390 = NP_974607 NP_567702 CAB45074 CAB79349 AAM10320 AAP21148 ubiquitin-protein ligase/ubiquitin-protein ligase /transport inhibitor response-like protein /transport inhibitor response-like protein /AT4g24390/T22A6_220 /At4g24390/T22A6_220
AT5G49980 = NP_568718 BAA97019 AAL08287 AAM98092 AAO42782 ubiquitin-protein ligase/transport inhibitor response 1 protein /AT5g49980/K9P8_12 /AT5g49980/K9P8_12 /AT5g49980/K9P8_12
100
AAK16647 Populus tremula x Populus tremuloides F-box containing protein TIR1
10059100
Smo_TIR1_16_1
Smo_TIR1_7_1
10043
Smo_TIR1_1_1 Smo_TIR1_5_1
1944
Ppa_TIR1_1_1
Ppa_TIR1_36_2
100
Ppa_TIR1_14_1
Ppa_TIR1_4_1
100100100
Smo_TIR1_12_1
Ppa_TIR1_2_1
Ppa_TIR1_3_1
87
Ppa_TIR1_8_1
10016
Ppa_TIR1_11_1
Ppa_TIR1_7_1
Ppa_TIR1_9_1
10077
Smo_TIR1_21_2
Smo_TIR1_11_1
Smo_TIR1_6_1
100
Smo_TIR1_10_1
NP_912346 Oryza sativa (japonica cultivar-group) AAP06838 unknown protein/unknown protein
AAU90110 Oryza sativa (japonica cultivar-group) putative LRR-containing F-box protein
NP_915536 Oryza sativa (japonica cultivar-group) AAO38719 BAD81943 AAY41186 P0529E05.15/COI1 /COI1 /coronatine-insensitive 1
100
AT2G39940 = NP_565919 O04197 AAB95279 AAC17498 AAK73983 AAM91386 COI1 (CORONATINE INSENSITIVE 1); ubiquitin-protein ligase/COI1_ARATH Coronatine-insensitive protein 1 (F-box/LRR-repeat protein 2) (AtFBL2) (COI-1) (AtCOI1)/coronatine-insensitive 1 (C
AAR82925 Lycopersicon esculentum AAR82926 coronatine-insensitive 1/coronatine-insensitive 1
AAZ66745 Glycine max coronatine-insensitive 1
46100649927753162
Smo_TIR1_9_1
Ppa_TIR1_5_1
Ppa_TIR1_37_1
100929499
XP_450015 Oryza sativa (japonica cultivar-group) BAD16491 BAD17560 putative Avr9/Cf-9 rapidly elicited protein /putative Avr9/Cf-9 rapidly elicited protein /putative Avr9/Cf-9 rapidly elicited protein
AT5G67250 = NP_569047 AAG21977 AAO00833 AAP68325 SKIP2 (SKP1 INTERACTING PARTNER 2); ubiquitin-protein ligase/SKP1 interacting partner 2 /SKP1 interacting partner 2 (SKIP2) /At5g67250
ABD32619 Medicago truncatula Cyclin-like F-box
8310055100
0.100