query gene name (CHR8_b): global / partial tree
File name:
397 aa residues 80 OTU included.
Results of partial trees included / Partial tree including Ppa.
Assemble Job Id:
Tree job id: SnSCvq
BP values out of 100
Analyzed by yoguri@nibb.ac.jp
Date: Fri Aug 25 11:22:12 JST 2006
XP_666775 Cryptosporidium hominis TU502 EAL36543 Cryptosporidium hominis chromatin remodelling complex protein SNF2L/chromatin remodelling complex protein SNF2L
BAE06719 Ciona intestinalis Ci-SWI/SNF
XP_572375 Cryptococcus neoformans var. neoformans JEC21 EAL17685 Cryptococcus neoformans var. neoformans B-3501A AAW45068 Cryptococcus neoformans var. neoformans JEC21 transcription activator snf2l1/hypothetical protein CNBL2000 /transcription ac
XP_758754 Ustilago maydis 521 EAK83777 hypothetical protein UM02607.1/hypothetical protein UM02607.1
99
XP_445248 Candida glabrata CBS 138 CAG58154 unnamed protein product/unnamed protein product
NP_009804 Saccharomyces cerevisiae P38144 CAA85208 Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes; ATPase that forms a complex with Ioc2p and Ioc4p to regulate transcription elongation, and a complex with
52
NP_985508 Eremothecium gossypii AAS53332 Ashbya gossypii ATCC 10895 AFL040Wp/AFL040Wp
100
XP_502458 Yarrowia lipolytica CLIB122 CAG80646 hypothetical protein/unnamed protein product
XP_663247 Aspergillus nidulans FGSC A4 EAA62736 hypothetical protein AN5643.2/hypothetical protein AN5643.2
XP_751485 Aspergillus fumigatus Af293 EAL89447 SNF2 family helicase/ATPase /SNF2 family helicase/ATPase, putative
BAE54714 Aspergillus oryzae unnamed protein product
80100
XP_956548 Neurospora crassa N150 XP_323194 Neurospora crassa EAA27312 hypothetical protein/hypothetical protein /hypothetical protein
EAQ84663 Chaetomium globosum CBS 148.51 conserved hypothetical protein
82
XP_390445 Gibberella zeae PH-1 EAA69967 conserved hypothetical protein/conserved hypothetical protein
96
XP_368232 Magnaporthe grisea 70-15 hypothetical protein MG01012.4
601004424
XP_716066 Candida albicans SC5314 EAK97058 hypothetical protein CaO19_7401/hypothetical protein CaO19.7401
XP_458541 Debaryomyces hansenii CBS767 CAG86673 hypothetical protein DEHA0D02365g/unnamed protein product
99
NP_986084 Eremothecium gossypii AAS53908 Ashbya gossypii ATCC 10895 AFR537Wp/AFR537Wp
XP_456186 Kluyveromyces lactis NRRL Y-1140 CAG98894 unnamed protein product/unnamed protein product
XP_447665 Candida glabrata CBS 138 CAG60602 hypothetical protein CAGL0I09614g/unnamed protein product
NP_014948 Saccharomyces cerevisiae CAA99622 Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes; ATPase component that, with Itc1p, forms a complex required for repression of a-specific genes, INO1, and early m
9551100665310064
NP_586247 Encephalitozoon cuniculi GB-M1 CAD25851 similarity to THE ATPase COMPONENT OF THE TWO-SUBUNIT CHROMATIN REMODELING FACTOR/similarity to THE ATPase COMPONENT OF THE TWO-SUBUNIT CHROMATIN REMODELING FACTOR
CAE63752 Caenorhabditis briggsae Hypothetical protein CBG08287
CAE62008 Caenorhabditis briggsae Hypothetical protein CBG06016
NP_502082 Caenorhabditis elegans CAA92768 CAA92978 AAG16655 Phasmid Socket Absent family member (psa-4)/Hypothetical protein F01G4.1 /Hypothetical protein F01G4.1 /SWI2/SNF2-like protein; PSA-4
59100
XP_757330 Ustilago maydis 521 EAK81967 hypothetical protein UM01183.1/hypothetical protein UM01183.1
NP_986109 Eremothecium gossypii AAS53933 Ashbya gossypii ATCC 10895 AFR562Cp/AFR562Cp
XP_451901 Kluyveromyces lactis NRRL Y-1140 CAH02294 unnamed protein product/unnamed protein product
100
AAA35120 Saccharomyces cerevisiae STH1 protein
NP_012140 Saccharomyces cerevisiae P32597 BAA01446 CAA86866 AAZ22501 ATPase component of the ATP-dependent RSC chromatin remodeling complex required for kinetochore function in chromosome segregation; required for expression of early meiotic genes; e
100
XP_446743 Candida glabrata CBS 138 CAG59670 unnamed protein product/unnamed protein product
1006998100
AT2G18760 = NP_179466 AAD08945 ATP binding/ATP-dependent helicase/DNA binding /helicase/nucleic acid binding /putative SNF2/RAD54 family DNA repair and recombination protein
XP_549820 Oryza sativa (japonica cultivar-group) BAB62641 BAB92143 BAD04853 BAD45511 putative RAD26/putative DNA repair and recombination protein /putative DNA repair and recombination protein /Cockayne syndrome group B /putative RAD26
100
Ppa_CHR8_43_1
67
Smo_CHR8_32_1
100
2231_Cre
96
NP_984796 Eremothecium gossypii AAS52620 Ashbya gossypii ATCC 10895 AEL065Cp/AEL065Cp
XP_454975 Kluyveromyces lactis NRRL Y-1140 CAH00062 unnamed protein product/unnamed protein product
XP_447327 Candida glabrata CBS 138 CAG60264 hypothetical protein CAGL0I01694g/unnamed protein product
CAA57290 Saccharomyces cerevisiae RAD26
NP_012569 Saccharomyces cerevisiae P40352 AAA34655 CAA89562 Protein involved in transcription-coupled repair nucleotide excision repair of UV-induced DNA lesions; homolog of human CSB protein; Rad26p/RAD26_YEAST DNA repair and recombination protein R
1008484100
XP_714194 Candida albicans SC5314 XP_714234 EAK95111 EAK95157 hypothetical protein CaO19.8240/hypothetical protein CaO19.607 /hypothetical protein CaO19.8240 /hypothetical protein CaO19.607
XP_459783 Debaryomyces hansenii CBS767 CAG88022 hypothetical protein DEHA0E11528g/unnamed protein product
100
NP_588091 Schizosaccharomyces pombe 972h- BAA84456 Schizosaccharomyces pombe CAB62827 hypothetical protein SPCP25A2.02c/Rhp26 /rhp26
XP_501912 Yarrowia lipolytica CLIB122 CAG82232 hypothetical protein/unnamed protein product
495669
XP_382716 Gibberella zeae PH-1 EAA67770 hypothetical protein FG02540.1/hypothetical protein FG02540.1
XP_746571 Aspergillus fumigatus Af293 EAL84533 DNA repair protein Rhp26/DNA repair protein (Rhp26), putative
BAE64858 Aspergillus oryzae unnamed protein product
XP_664707 Aspergillus nidulans FGSC A4 EAA61308 hypothetical protein AN7103.2/hypothetical protein AN7103.2
5710010099
XP_640679 Dictyostelium discoideum AX4 EAL66702 Dictyostelium discoideum hypothetical protein DDB0205584/hypothetical protein DDB0205584
4631
CAG09381 Tetraodon nigroviridis unnamed protein product
XP_224627 Rattus norvegicus PREDICTED: similar to DNA excision repair protein ERCC-6 (Cockayne syndrome protein CSB)
XP_484360 Mus musculus XP_917558 PREDICTED: excision repair cross-complementing rodent repair deficiency, complementation group 6 isoform 1/PREDICTED: similar to DNA excision repair protein ERCC-6 (Cockayne syndrome protein CSB) isoform 5
96
XP_534944 Canis familiaris PREDICTED: similar to DNA excision repair protein ERCC-6 (Cockayne syndrome protein CSB)
NP_000115 Homo sapiens Q03468 AAA52397 AAO13487 CAH70291 excision repair cross-complementing rodent repair deficiency, complementation group 6/ERCC6_HUMAN DNA excision repair protein ERCC-6 (ATP-dependent helicase ERCC6) (Cockayne syndrome protein CS
5999
XP_421656 Gallus gallus PREDICTED: similar to DNA excision repair protein ERCC-6 (Cockayne syndrome protein CSB)
10010094
gnl|CMER|CMO092C_DNA_repair_and_recombination_protein_RAD26
83
XP_649509 Entamoeba histolytica HM-1:IMSS EAL44123 DNA repair and recombination protein RAD26/DNA repair and recombination protein RAD26, putative
87
NP_510607 Caenorhabditis elegans CAB03135 human CSB (Cockayne Syndrome B) homolog family member (csb-1)/Hypothetical protein F53H4.1
CAE69733 Caenorhabditis briggsae Hypothetical protein CBG16004
10055
O12944 Gallus gallus AAB54115 RAD54_CHICK DNA repair and recombination protein RAD54-like (RAD54 homolog) (Putative recombination factor GdRad54)/putative recombination factor GdRad54
NP_001001241 Xenopus tropicalis AAH67986 RAD54-like/RAD54-like
100
XP_758230 Ustilago maydis 521 EAK83081 hypothetical protein UM02083.1/hypothetical protein UM02083.1
BAC11858 Magnaporthe grisea recombinational repair protein
XP_959470 Neurospora crassa N150 XP_331124 Neurospora crassa EAA30234 CAF05853 hypothetical protein/hypothetical protein ( (AB032901) Rad54 homolog /hypothetical protein ( (AB032901) Rad54 homolog /Rad54 homolog MUS-25
92
CAD60786 Podospora anserina unnamed protein product
92
XP_388138 Gibberella zeae PH-1 EAA76579 hypothetical protein FG07962.1/hypothetical protein FG07962.1
10099100
CAD37001 Neurospora crassa related to DNA repair protein RAD26
XP_390397 Gibberella zeae PH-1 EAA70064 hypothetical protein FG10221.1/hypothetical protein FG10221.1
100
XP_528720 Pan troglodytes PREDICTED: similar to putative repair and recombination helicase RAD26L
NP_001010895 Homo sapiens CAI16517 RAD26L hypothetical protein/RP11-346B7.2
100
XP_533502 Canis familiaris PREDICTED: similar to RAD26L hypothetical protein
67
AAF73858 Mus musculus putative repair and recombination helicase RAD26L
10010086
BAA96898 Arabidopsis thaliana unnamed protein product
NP_666347 Mus musculus AAH37660 BAC26244 AAN87172 excision repair cross-complementing rodent repair deficiency complementation group 6 - like/Excision repair cross-complementing rodent repair deficiency complementation group 6 - like /unnamed protein
XP_228546 Rattus norvegicus PREDICTED: similar to SNF2/RAD54 family protein
100
XP_549075 Canis familiaris PREDICTED: similar to excision repair cross-complementing rodent repair deficiency complementation group 6 - like
XP_521130 Pan troglodytes NP_060139 Homo sapiens NP_001009954 AAI11487 PREDICTED: similar to SNF2/RAD54 family protein /hypothetical protein LOC54821 isoform a /hypothetical protein LOC54821 isoform b /Hypothetical protein LOC54821, isoform a
991001004690
XP_958601 Neurospora crassa N150 XP_327842 Neurospora crassa EAA29365 hypothetical protein/hypothetical protein /hypothetical protein
XP_321235 Anopheles gambiae str. PEST EAA01172 ENSANGP00000008413/ENSANGP00000008413
10010010048
0.100