query gene name (MSI4300_2): global / partial tree
File name:
106 aa residues 104 OTU included.
Results of partial trees included / Partial tree including Ppa.
Assemble Job Id:
Tree job id: wvP0m4
BP values out of 100
Analyzed by aono@nibb.ac.jp
Date: Fri May 26 21:25:17 JST 2006
Smo_AtMSI4963753784_1
ABA91317 Oryza sativa (japonica cultivar-group) WD-40 repeat protein, putative
ABA95718 Oryza sativa (japonica cultivar-group) WD-40 repeat protein, putative
91
AT2G19540 = NP_179544 AAD10153 AAK43883 AAM91214 nucleotide binding/putative WD-40 repeat protein /putative WD-40 repeat protein /putative WD-40 repeat protein
38
AAN40972 Tortula ruralis WD40
30
ABB72800 Solanum tuberosum WD-40 repeat protein-like protein
92
3036_Cre
3129
XP_786328 Strongylocentrotus purpuratus PREDICTED: similar to glutamate-rich WD repeat containing 1 (predicted)
NP_001003509 Danio rerio AAH78350 hypothetical protein LOC445115/Zgc:92443
CAF97904 Tetraodon nigroviridis unnamed protein product
89
NP_989268 Xenopus tropicalis AAH64215 CAJ82130 glutamate-rich WD repeat containing 1/Glutamate-rich WD repeat containing 1 /glutamate-rich WD repeat containing 1
AAH44118 Xenopus laevis Grwd-pending-prov protein
AAH73699 Xenopus laevis MGC83609 protein
6796
XP_887964 Bos taurus XP_887945 XP_887978 XP_612892 XP_887970 PREDICTED: similar to Glutamate-rich WD-repeat protein 1 isoform 4/PREDICTED: similar to Glutamate-rich WD-repeat protein 1 isoform 2 /PREDICTED: similar to Glutamate-rich WD-repeat protein
NP_001012067 Rattus norvegicus XP_577803 Q5XI13 AAH83883 glutamate-rich WD repeat containing 1 (predicted)/PREDICTED: glutamate-rich WD repeat containing 1 (predicted) /GRWD1_RAT Glutamate-rich WD repeat-containing protein 1 /Glutamate-rich WD repeat
NP_700468 Mus musculus Q810D6 AAH08121 AAH28896 BAC66461 AAH83143 glutamate-rich WD repeat containing 1/GRWD1_MOUSE Glutamate-rich WD repeat-containing protein 1 (Protein A301) /Grwd1 protein /Glutamate-rich WD repeat containing 1 /A301 protein /Grwd
6134
XP_854878 Canis familiaris PREDICTED: similar to glutamate-rich WD repeat containing 1 (predicted)
NP_113673 Homo sapiens XP_524324 Pan troglodytes Q9BQ67 Homo sapiens AAH02440 AAK17998 BAB85528 CAD28519 BAC11130 glutamate-rich WD repeat containing 1/PREDICTED: similar to Glutamate-rich WD-repeat protein 1 /GRWD1_HUMAN Glutamate-rich WD repeat
581407659
XP_569958 Cryptococcus neoformans var. neoformans JEC21 EAL21577 Cryptococcus neoformans var. neoformans B-3501A AAW42651 Cryptococcus neoformans var. neoformans JEC21 ribosome biogenesis-related protein/hypothetical protein CNBC6150 /ribosome bi
17
NP_498091 Caenorhabditis elegans AAF60780 Y54H5A.1/Hypothetical protein Y54H5A.1
CAE73768 Caenorhabditis briggsae Hypothetical protein CBG21312
100
XP_655352 Entamoeba histolytica HM-1:IMSS EAL49961 Glutamate-rich WD-repeat protein/Glutamate-rich WD-repeat protein, putative
227
XP_635306 Dictyostelium discoideum AX4 EAL61767 Dictyostelium discoideum hypothetical protein DDB0183986/hypothetical protein DDB0183986
3
XP_756949 Ustilago maydis 521 EAK80783 hypothetical protein UM00802.1/hypothetical protein UM00802.1
1
AAX27311 Schistosoma japonicum SJCHGC05598 protein
gnl|CMER|CMB073C_similar_to_ribosome_assembly_protein_RRB1
167
NP_595880 Schizosaccharomyces pombe 972h- CAB88237 Schizosaccharomyces pombe hypothetical protein SPBC1711.07/SPBC1711.07
10
XP_308636 Anopheles gambiae str. PEST EAA04110 ENSANGP00000011206/ENSANGP00000011206
EAL25919 Drosophila pseudoobscura GA11814-PA
NP_610182 Drosophila melanogaster AAL49099 AAM75055 AAF57313 lethal (2) 09851 CG12792-PA/RE55020p /RE17371p /CG12792-PA
100991264
XP_952045 Theileria annulata strain Ankara CAI74313 Theileria annulata hypothetical protein TA14475/hypothetical protein, conserved
XP_765236 Theileria parva strain Muguga EAN32953 Theileria parva hypothetical protein TP02_0670/hypothetical protein TP02_0670
100
XP_625913 Cryptosporidium parvum Iowa II EAK87920 Cryptosporidium parvum hypothetical protein cgd4_3360/WD repeat protein
XP_668615 Cryptosporidium hominis TU502 EAL38409 Cryptosporidium hominis hypothetical protein Chro.40382/hypothetical protein Chro.40382
1006799
XP_728365 Plasmodium yoelii yoelii str. 17XNL EAA19930 Plasmodium yoelii yoelii hypothetical protein PY01043/wd-40 repeat protein msi1
XP_680059 Plasmodium berghei strain ANKA CAH99707 Plasmodium berghei chromatin assembly factor 1 subunit/chromatin assembly factor 1 subunit, putative
100
CAJ06090 Leishmania major hypothetical protein, conserved
NP_586003 Encephalitozoon cuniculi GB-M1 CAD25607 HISTONE ACETYLTRANSFERASE TYPE B SUBUNIT 2/HISTONE ACETYLTRANSFERASE TYPE B SUBUNIT 2
EAS06726 Tetrahymena thermophila SB210 hypothetical protein TTHERM_00688660
43
Smo_AtMSI4_108_1 Smo_AtMSI4_59_1
24
XP_960994 Neurospora crassa N150 XP_326965 Neurospora crassa Q7S7N3 EAA31758 hypothetical protein/hypothetical protein /HAT2_NEUCR Histone acetyltransferase type B subunit 2 /hypothetical protein
XP_386974 Gibberella zeae PH-1 Q4I7L0 Gibberella zeae EAA76730 Gibberella zeae PH-1 hypothetical protein FG06798.1/HAT2_GIBZE Histone acetyltransferase type B subunit 2 /hypothetical protein FG06798.1
50
XP_367398 Magnaporthe grisea 70-15 hypothetical protein MG07323.4
100
XP_748030 Aspergillus fumigatus Af293 Q4WEI5 Aspergillus fumigatus EAL85992 Aspergillus fumigatus Af293 chromatin assembly factor 1 subunit C/HAT2_ASPFU Histone acetyltransferase type B subunit 2 /chromatin assembly factor 1 subunit C, putative
Q2UA71 Aspergillus oryzae BAE61544 HAT2_ASPOR Histone acetyltransferase type B subunit 2/unnamed protein product
XP_681456 Aspergillus nidulans FGSC A4 EAA59209 hypothetical protein AN8187.2/hypothetical protein AN8187.2
4010097
NP_587881 Schizosaccharomyces pombe 972h- O94244 Schizosaccharomyces pombe CAA20448 hypothetical protein SPCC1672.10/HAT2_SCHPO Histone acetyltransferase type B subunit 2/SPCC1672.10
NP_594864 Schizosaccharomyces pombe 972h- O14021 Schizosaccharomyces pombe CAB10144 hypothetical protein SPAC29A4.18/PRW1_SCHPO RbAp48-related WD40-repeat protein prw1/SPAC29A4.18
4926
XP_461437 Debaryomyces hansenii CBS767 Q6BK34 Debaryomyces hansenii CAG89852 Debaryomyces hansenii CBS767 hypothetical protein DEHA0F26752g/HAT2_DEBHA Histone acetyltransferase type B subunit 2/unnamed protein product
XP_712421 Candida albicans SC5314 XP_712278 Q59RH5 Candida albicans EAK93085 Candida albicans SC5314 EAK93235 putative histone acetyltransferase subunit/putative histone acetyltransferase subunit /HAT2_CANAL Histone acetyltransferase type B subun
100
XP_499647 Yarrowia lipolytica CLIB122 CAG83567 hypothetical protein/unnamed protein product
78
XP_628031 Cryptosporidium parvum Iowa II EAK88601 Cryptosporidium parvum hypothetical protein cgd1_1930/WD40 repeat protein, predicted histone deacetylase subunit
XP_730278 Plasmodium yoelii yoelii str. 17XNL XP_679236 Plasmodium berghei strain ANKA EAA21843 Plasmodium yoelii yoelii CAH98255 Plasmodium berghei hypothetical protein PY02400/chromatin assembly factor 1 protein WD40 domain /wd-40 repeat prot
NP_703307 Plasmodium falciparum 3D7 CAD49064 chromatin assembly factor 1 protein WD40 domain, putative/chromatin assembly factor 1 protein WD40 domain, putative
100
XP_726172 Plasmodium yoelii yoelii str. 17XNL EAA17737 Plasmodium yoelii yoelii hypothetical protein PY05679/wd-40 repeat protein msi3
NP_702203 Plasmodium falciparum 3D7 AAN36927 chromatin assembly factor 1 p55 subunit, putative/chromatin assembly factor 1 p55 subunit, putative
1005343206
Smo_AtMSI4963763482_1
XP_760907 Ustilago maydis 521 Q4P553 Ustilago maydis EAK86140 Ustilago maydis 521 hypothetical protein UM04760.1/HAT2_USTMA Histone acetyltransferase type B subunit 2/hypothetical protein UM04760.1
65
XP_571944 Cryptococcus neoformans var. neoformans JEC21 Q5KDT9 Filobasidiella neoformans EAL19568 Cryptococcus neoformans var. neoformans B-3501A AAW44637 Cryptococcus neoformans var. neoformans JEC21 H3/H4 histone acetyltransferase /HAT2_CRYNE
37
gnl|CMER|CMT515C_chromatin_assembly_factor_1_55_kDa_subunit
27
AT2G16780 = NP_179269 O22468 B84544 AAB70243 AAD24611 AAL10505 AAM65591 MSI2/MSI2_ARATH WD-40 repeat protein MSI2/B84544 probable WD-40 repeat protein, MSI2 /WD-40 repeat protein /putative WD-40 repeat protein, MSI2 /At2g16780/T24I21.19 /putative WD
AT4G35050 = NP_195231 O22469 AAB70244 CAA17770 CAB80222 AAO22687 AAW38992 MSI3/MSI3_ARATH WD-40 repeat protein MSI3/WD-40 repeat protein /WD-40 repeat protein (MSI3) /WD-40 repeat protein (MSI3) /putative WD-40 repeat protein (MSI3) /At4g35050
100
AAM28229 Zea mays nucleosome/chromatin assembly factor 104
BAD46577 Oryza sativa (japonica cultivar-group) putative WD-40 repeat protein
10078
AT5G58230 = NP_200631 O22467 AAB70242 BAA96914 AAL24356 AAM47965 MSI1 (MULTICOPY SUPRESSOR OF IRA1)/MSI1_ARATH WD-40 repeat protein MSI1 (Protein MULTICOPY SUPPRESSOR OF IRA 1) (Protein medicis) /WD-40 repeat protein /WD-40 repeat protein MSI1 /WD-4
ABB92268 Triticum aestivum MSI
AAL33648 Zea mays MSI type nucleosome/chromatin assembly factor C
70
AAT85286 Oryza sativa (japonica cultivar-group) MSI type nucleosome/chromatin assembly factor C, putative
57
O22466 Lycopersicon esculentum AAB70241 MSI1_LYCES WD-40 repeat protein MSI1/WD-40 repeat protein
67100
Smo_AtMSI4_7_2 Smo_AtMSI4_27_1
Ppa_AtMSI4_6_1
725933
3886_Cre
52
XP_640105 Dictyostelium discoideum AX4 EAL66124 Dictyostelium discoideum hypothetical protein DDB0204816/hypothetical protein DDB0204816
CAE60159 Caenorhabditis briggsae Hypothetical protein CBG03711
NP_492551 Caenorhabditis elegans P90917 CAB03172 RbAp48 related family member (rba-1)/RBA1_CAEEL Probable histone-binding protein rba-1 /Hypothetical protein K07A1.11
98
AAX25752 Schistosoma japonicum SJCHGC09173 protein
AAL56459 Oikopleura dioica similar to retinoblastoma binding proteins 4 and 7
AAW27171 Schistosoma japonicum SJCHGC09312 protein
XP_312936 Anopheles gambiae str. PEST EAA08393 ENSANGP00000014714/ENSANGP00000014714
CAE60158 Caenorhabditis briggsae Hypothetical protein CBG03710
NP_492552 Caenorhabditis elegans T23391 P90916 CAB03178 CAA19477 AAD05571 abnormal cell LINeage family member (lin-53)/T23391 hypothetical protein K07A1.12 - Caenorhabditis elegans/LIN53_CAEEL Probable histone-binding protein lin-53 (Abnormal cell li
936
XP_624580 Apis mellifera PREDICTED: similar to ENSANGP00000014714
NP_524354 Drosophila melanogaster Q24572 AAB37257 AAF55146 AAL28956 EAL29039 Drosophila pseudoobscura Chromatin assembly factor 1 subunit CG4236-PA/CAF1_DROME Probable histone-binding protein Caf1 (Chromatin assembly factor 1 p55 subunit) (CAF-1 p5
XP_858055 Canis familiaris XP_858100 XP_520956 Pan troglodytes NP_114004 Rattus norvegicus XP_858015 Canis familiaris XP_857969 XP_857851 NP_033057 Mus musculus XP_537971 Canis familiaris NP_001029810 Bos taurus XP_849201 Canis familiaris
XP_892535 Mus musculus XP_913254 PREDICTED: similar to Histone acetyltransferase type B subunit 2 (Retinoblastoma binding protein p46) (Retinoblastoma-binding protein 7) (RBBP-7)/PREDICTED: similar to Histone acetyltransferase type B subunit 2 (Retin
XP_224712 Rattus norvegicus PREDICTED: similar to retinoblastoma binding protein 7
7259
NP_990001 Gallus gallus NP_989285 Xenopus tropicalis Q8AVH1 Xenopus laevis Q6P315 Xenopus tropicalis Q9I8G9 Gallus gallus AAF87775 AAH42283 Xenopus laevis AAH64219 Xenopus tropicalis retinoblastoma binding protein 7/retinoblastoma binding
47
XP_708179 Danio rerio XP_707625 NP_997760 XP_225450 Rattus norvegicus XP_801904 Strongylocentrotus purpuratus XP_535325 Canis familiaris XP_864405 XP_780271 Strongylocentrotus purpuratus XP_684740 Danio rerio NP_005601 Homo sapiens NP_0330
XP_919078 Mus musculus XP_897611 PREDICTED: similar to Chromatin assembly factor 1 subunit C (CAF-1 subunit C) (Chromatin assembly factor I p48 subunit) (CAF-I 48 kDa subunit) (CAF-Ip48) (Retinoblastoma binding protein p48) (Retinoblastoma-binding pr
216
AAH45315 Danio rerio Retinoblastoma binding protein 4
3
CAF90748 Tetraodon nigroviridis unnamed protein product
XP_848223 Canis familiaris XP_855744 XP_855705 XP_855677 PREDICTED: similar to retinoblastoma binding protein 4 isoform 1/PREDICTED: similar to retinoblastoma binding protein 4 isoform 4 /PREDICTED: similar to retinoblastoma binding protein 4 isoform
XP_227252 Rattus norvegicus PREDICTED: similar to retinoblastoma binding protein 4
224445179181387524845391236
Smo_AtMSI4_2_1
AAF97517 Zea mays AAK67147 AAM77039 WD-repeat protein RBAP1/nucleosome/chromatin assembly factor C /nucleosome/chromatin assembly factor group C
BAD81520 Oryza sativa (japonica cultivar-group) putative Y1 protein
99
CAB52218 Silene latifolia CAB52261 CAB52219 CAC81926 CAC81927 CAF74832 Silene dioica CAF74833 CAF74834 Silene diclinis Y1 protein/Y1 protein /X1 protein /putative WD-repeat protein /putative WD-repeat protein /putative WD repeat protein /putative
CAF74836 Silene noctiflora putative WD repeat protein
44
AAL92489 Silene conica SlX1-like protein
43
CAF74835 Silene diclinis putative WD repeat protein
100
Ppa_AtMSI4_11_1 AAX58755 Physcomitrella patens WD-40 repeat domain protein
AAX47182 Pisum sativum FVE
AT4G29730 = NP_194702 Q9SU78 CAB45333 CAB79731 AAQ89632 BAD44188 MSI5/MSI5_ARATH WD-40 repeat protein MSI5/WD-40 repeat-like protein /WD-40 repeat-like protein /At4g29730 /WD-40 repeat-like protein
AT2G19520 = NP_565456 O22607 AAD03340 AAL15286 AAL24281 AAM10009 AAD10151 AAP29474 AAP29475 AAX51264 FVE (FVE)/MSI4_ARATH WD-40 repeat protein MSI4 (Altered cold-responsive gene 1 protein)/WD-40 repeat protein MSI4 /At2g19520/F3P11.12 /putative WD-4
93595245751004827
0.100