query gene name (ARR22-150.nx2): global / partial tree
File name:
104 aa residues 107 OTU included.
Results of partial trees included / Partial tree including Ppa.
Assemble Job Id:
Tree job id: kq6AZE
BP values out of 100
Analyzed by tomoakin@kenroku.kanazawa-u.ac.jp
Date: Fri Aug 24 14:44:13 JST 2007
ZP_01113539 Reinekea sp. MED297 EAR10337 sensor/response regulator hybrid /sensor/response regulator hybrid
ZP_00836035 Shewanella sp. PV-4 EAP04105 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt/Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP
43
ZP_00775529 Pseudoalteromonas atlantica T6c EAO67882 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Hpt:Diverse 7TM receptor, transmembrane region/Response regulator receiver:ATP-binding region, ATPase-like
29
YP_527712 Saccharophagus degradans 2-40 ABD81500 sensor/response regulator hybrid /sensor/response regulator hybrid
YP_433070 Hahella chejuensis KCTC 2396 ABC28645 Signal transduction histidine kinase/Signal transduction histidine kinase
2940
ZP_00607570 Magnetococcus sp. MC-1 ZP_00608844 EAN26742 EAN28038 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal/Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal /
ZP_00606196 Magnetococcus sp. MC-1 EAN29352 PAS/PAS
6518
ZP_00919378 Rhodobacter sphaeroides ATCC 17029 EAP67472 PAS/PAS
YP_353161 Rhodobacter sphaeroides 2.4.1 ABA79260 multisensor hybrid histidine kinase/multisensor hybrid histidine kinase
100
ZP_00912415 Rhodobacter sphaeroides ATCC 17025 EAP66143 PAS/PAS
100
NP_421956 Caulobacter crescentus CB15 AAK25124 sensor histidine kinase/response regulator /sensor histidine kinase/response regulator
48
ZP_00622022 Silicibacter sp. TM1040 EAN56252 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal/Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal
242
NP_863746 Rhodopirellula baltica SH 1 CAD71417 sensory transduction histidine kinase/sensory transduction histidine kinase
ZP_01091152 Blastopirellula marina DSM 3645 EAQ80253 sensory transduction histidine kinase/sensory transduction histidine kinase
NP_973100 Treponema denticola ATCC 35405 AAS13019 sensor histidine kinase/response regulator /sensor histidine kinase/response regulator
236
NP_804450 Salmonella enterica subsp. enterica serovar Typhi Ty2 YP_217261 Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 YP_149907 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 NP_456815 Salmonella e
ZP_00726740 Escherichia coli F11 NP_754647 Escherichia coli CFT073 AAN81215 COG0642: Signal transduction histidine kinase/Sensor protein rcsC /Sensor protein rcsC
ZP_00926828 Escherichia coli 101-1 ZP_00696309 Shigella boydii BS512 NP_311134 Escherichia coli O157:H7 ZP_00700281 Escherichia coli E24377A ZP_00717813 Escherichia coli B7A ZP_00706331 Escherichia coli HS ZP_00730993 Escherichia coli E22
AAA24505 Escherichia coli putative
7772100
YP_049308 Erwinia carotovora subsp. atroseptica SCRI1043 CAG74112 two-component system sensor protein/two-component system sensor protein
80
YP_455261 Sodalis glossinidius str. 'morsitans' BAE74856 capsular synthesis sensor protein RcsC/capsular synthesis sensor protein RcsC
81
ZP_00794801 Yersinia pseudotuberculosis IP 31758 ZP_00798568 Yersinia pestis Angola YP_069792 Yersinia pseudotuberculosis IP 32953 ZP_01176574 Yersinia pestis biovar Orientalis str. IP275 NP_404821 Yersinia pestis CO92 NP_670271 Yersinia pest
ZP_00830973 Yersinia frederiksenii ATCC 33641 COG0642: Signal transduction histidine kinase
51
ZP_00820525 Yersinia bercovieri ATCC 43970 COG0642: Signal transduction histidine kinase
ZP_00824232 Yersinia mollaretii ATCC 43969 COG0642: Signal transduction histidine kinase
71
ZP_00832422 Yersinia intermedia ATCC 29909 COG0642: Signal transduction histidine kinase
4910081
NP_930281 Photorhabdus luminescens subsp. laumondii TTO1 CAE15423 sensor protein (capsular synthesis regulator component C)/sensor protein (capsular synthesis regulator component C)
AAT41677 Edwardsiella ictaluri sensor histidine kinase
3870
AAC82662 Proteus mirabilis RcsC
96
ZP_00898632 Pseudomonas putida F1 NP_745551 Pseudomonas putida KT2440 AAN69015 EAP52455 Pseudomonas putida F1 extracellular solute-binding protein, family 3:Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-termina
ZP_00921479 Shigella dysenteriae 1012 ZP_00926998 Escherichia coli 101-1 ZP_00697916 Shigella boydii BS512 NP_708241 Shigella flexneri 2a str. 301 ZP_00706464 Escherichia coli HS ZP_00710333 Escherichia coli B171 ZP_00719750 Escherichia col
BAA03108 Escherichia coli EvgS
NP_311276 Escherichia coli O157:H7 NP_288940 Escherichia coli O157:H7 EDL933 P58402 Escherichia coli O157:H7 AAG57495 Escherichia coli O157:H7 EDL933 BAB36672 Escherichia coli O157:H7 putative sensor for regulator EvgA/putative sensor for reg
ZP_00721944 Escherichia coli F11 COG0642: Signal transduction histidine kinase
522429
YP_405845 Shigella dysenteriae Sd197 NP_754788 Escherichia coli CFT073 AAN81356 ABB64354 Shigella dysenteriae Sd197 putative sensor for regulator EvgA/Sensor protein evgS precursor /Sensor protein evgS precursor /putative sensor for regulator Evg
1005351
YP_260298 Pseudomonas fluorescens Pf-5 AAY92462 sensor histidine kinase/response regulator /sensor histidine kinase/response regulator
61
ZP_00595391 Ralstonia metallidurans CH34 EAN52184 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal/Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal
21
ZP_00607549 Magnetococcus sp. MC-1 EAN28017 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal/Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal
ZP_01132440 Pseudoalteromonas tunicata D2 EAR30806 hypothetical protein PTD2_04516/hypothetical protein PTD2_04516
23
YP_299535 Ralstonia eutropha JMP134 3552_Cre AAZ64691 PAS/PAS
16
NP_902918 Chromobacterium violaceum ATCC 12472 AAQ60912 hypothetical protein CV3248/conserved hypothetical protein
YP_287070 Dechloromonas aromatica RCB AAZ48600 PAS/PAS
57
YP_286146 Dechloromonas aromatica RCB AAZ47676 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal/Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP
34
YP_286011 Dechloromonas aromatica RCB AAZ47541 PAS/PAS
15
ZP_01003926 Loktanella vestfoldensis SKA53 EAQ06061 hypothetical protein SKA53_08146/hypothetical protein SKA53_08146
12
ZP_00055969 Magnetospirillum magnetotacticum MS-1 COG0642: Signal transduction histidine kinase
4
YP_338653 Pseudoalteromonas haloplanktis TAC125 CAI85210 sensor protein/putative sensor protein; similar to LuxQ in Vibrio harveyi, similar to ArcB sensor in E. coli
00
YP_285150 Dechloromonas aromatica RCB AAZ46680 PAS/PAS
YP_064095 Desulfotalea psychrophila LSv54 CAG35088 two-component system sensory/regulatory protein (hybrid family) /probable two-component system sensory/regulatory protein (hybrid family)
27
YP_341762 Pseudoalteromonas haloplanktis TAC125 CAI89316 putative signal transduction histidine kinase two-component system with Protein-glutamate methylesterase domain/putative signal transduction histidine kinase two-component system with Protein-g
00
ZP_01113337 Reinekea sp. MED297 EAR10613 PAS/PAS
YP_283452 Dechloromonas aromatica RCB AAZ44982 PAS/PAS
390
ZP_00820852 Yersinia bercovieri ATCC 43970 COG0642: Signal transduction histidine kinase
ZP_00826310 Yersinia mollaretii ATCC 43969 COG0642: Signal transduction histidine kinase
100
ZP_01133903 Pseudoalteromonas tunicata D2 EAR28095 sensory box sensor histidine kinase/response regulator /sensory box sensor histidine kinase/response regulator
31
XP_660818 Aspergillus nidulans FGSC A4 EAA63115 hypothetical protein AN3214.2/hypothetical protein AN3214.2
YP_236012 Pseudomonas syringae pv. syringae B728a AAY37974 PAS/PAS
5710
YP_204679 Vibrio fischeri ES114 AAW85791 sensor protein LuxQ/sensor protein LuxQ
YP_130033 Photobacterium profundum SS9 CAG20231 hypothetical protein PBPRA1827/hypothetical protein
ZP_01162968 Photobacterium sp. SKA34 EAR53262 hypothetical protein SKA34_13950/hypothetical protein SKA34_13950
10046
ZP_01064298 Vibrio sp. MED222 EAQ54307 signal transduction histidine kinase/signal transduction histidine kinase
ZP_00988487 Vibrio splendidus 12B01 EAP96288 signal transduction histidine kinase/signal transduction histidine kinase
100
NP_797926 Vibrio parahaemolyticus RIMD 2210633 BAC59810 sensor histidine kinase/response regulator /sensor histidine kinase/response regulator
ZP_00762422 Vibrio sp. Ex25 COG0642: Signal transduction histidine kinase
1009041
ZP_00505065 Clostridium thermocellum ATCC 27405 EAM45912 PAS/PAS
ZP_01114114 Reinekea sp. MED297 EAR09821 probable two-component sensor/probable two-component sensor
70
ZP_01049613 Cellulophaga sp. MED134 EAQ39585 Response regulator receiver:ATP-binding region,ATPase-like:Histidine kinase, HAMP region:Histidine/Response regulator receiver:ATP-binding region,ATPase-like:Histidine kinase, HAMP region:Histidine
ZP_00951406 Croceibacter atlanticus HTCC2559 EAP85929 hybrid sensory kinase/hybrid sensory kinase
54
AAR30124 Gibberella moniliformis putative phytochrome-like histidine kinase PHY1p
XP_388784 Gibberella zeae PH-1 EAA72636 hypothetical protein FG08608.1/hypothetical protein FG08608.1
1007
ZP_01062767 Vibrio sp. MED222 EAQ55446 hypothetical protein MED222_08498/hypothetical protein MED222_08498
2
NP_799519 Vibrio parahaemolyticus RIMD 2210633 BAC61352 putative two-component sensor/putative two-component sensor
ZP_01101904 gamma proteobacterium KT 71 EAQ98346 two-component system sensor histidine kinase/response regulator, hybrid /two-component system sensor histidine kinase/response regulator, hybrid
28
Ppa_ARR22_12_1
30
Smo_ARR22_15_1
Smo_ARR22_10_1
100
NP_942216 Synechocystis sp. PCC 6803 BAD01830 two-component hybrid sensor and regulator/two-component hybrid sensor and regulator
ZP_01154229 Methanosaeta thermophila PT EAR48003 PAS/PAS
3716
YP_476763 Synechococcus sp. JA-2-3B'a(2-13) ABD01500 sensory box histidine kinase/response regulator /sensory box histidine kinase/response regulator
YP_476201 Synechococcus sp. JA-3-3Ab ABD00938 sensory box histidine kinase/response regulator /sensory box histidine kinase/response regulator
10011
ZP_00654962 Psychrobacter cryohalolentis K5 EAO10222 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal/Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal
1000
NP_769889 Bradyrhizobium japonicum USDA 110 BAC48514 two-component hybrid sensor and regulator/two-component hybrid sensor and regulator
ZP_00474112 Chromohalobacter salexigens DSM 3043 EAM22511 Response regulator receiver/Response regulator receiver
12
YP_444628 Salinibacter ruber DSM 13855 ABC46267 histidine kinase DhkJ/histidine kinase DhkJ
3
YP_287282 Dechloromonas aromatica RCB AAZ48812 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal/Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP
0
YP_314745 Thiobacillus denitrificans ATCC 25259 AAZ96940 Multi-sensor Hybrid Histidine Kinase/Multi-sensor Hybrid Histidine Kinase
NP_421765 Caulobacter crescentus CB15 AAK24933 sensory box histidine kinase/response regulator /sensory box histidine kinase/response regulator
1300
NP_902068 Chromobacterium violaceum ATCC 12472 AAQ60070 hypothetical protein CV2398/conserved hypothetical protein
ZP_00532462 Chlorobium phaeobacteroides BS1 EAM63183 Response regulator receiver:ATP-binding region, ATPase-like/Response regulator receiver:ATP-binding region, ATPase-like
16
ZP_00471763 Chromohalobacter salexigens DSM 3043 EAM24861 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Hpt/Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Hpt
3
ZP_00309409 Cytophaga hutchinsonii COG0642: Signal transduction histidine kinase
ZP_01056317 Roseobacter sp. MED193 EAQ45532 sensory box sensor histidine kinase/response regulator /sensory box sensor histidine kinase/response regulator
50
ZP_00504495 Clostridium thermocellum ATCC 27405 EAM46451 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt/Response regulator receiver:ATP-binding region, ATPase-like:Histidin
NP_907061 Wolinella succinogenes DSM 1740 CAE09961 Wolinella succinogenes SENSORY TRANSDUCTION HISTIDINE KINASE/SENSORY TRANSDUCTION HISTIDINE KINASE
170000
ZP_01062759 Vibrio sp. MED222 EAQ55438 Signal transduction histidine kinase/Signal transduction histidine kinase
ZP_00990587 Vibrio splendidus 12B01 EAP94482 Signal transduction histidine kinase/Signal transduction histidine kinase
100
YP_206195 Vibrio fischeri ES114 AAG60694 Vibrio fischeri AAW87307 Vibrio fischeri ES114 RscS; sensor kinase protein/RscS /RscS; sensor kinase protein
49
XP_469679 Oryza sativa (japonica cultivar-group) AAR87285 putative response regulator protein(receiver component)/putative response regulator protein(receiver component)
Smo_ARR22_4_1
Smo_ARR22_5_1
100
Ppa_ARR22_4_1
Ppa_ARR22_8_1
45
Ppa_ARR22_6_1
71100
Smo_ARR22_19_1
8958
AT5G26594 = NP_850864 DNA binding/two-component response regulator
AAC62225 Brassica napus response regulator protein
AT3G04280 = NP_850511 NP_187078 Q9M8Y4 AAF26786 AAM62859 ARR22 (ARABIDOPSIS RESPONSE REGULATOR 22); two-component response regulator/ARR22 (ARABIDOPSIS RESPONSE REGULATOR 22); transcription regulator/two-component response regulator /ARR22_ARATH Two
100972413
0.100