query gene name (PIL6.pt1.svg): global / partial tree
File name:
53 aa residues 165 OTU included.
Results of partial trees included / Partial tree including Ppa.
Assemble Job Id:
Tree job id: glXgka
BP values out of 100
Analyzed by thirai@nibb.ac.jp
Date: Wed Sep 06 18:49:47 JST 2006
AT1G27740 = NP_564293 AAF24948 AAM62663 DNA binding/transcription factor /T22C5.19 /unknown
ABA99756 Oryza sativa (japonica cultivar-group) Helix-loop-helix DNA-binding domain, putative
AT5G43175 = NP_680385 DNA binding/transcription factor
5556
AT2G14760 = NP_179083 CAE12171 transcription factor/putative bHLH084 transcription factor
XP_478937 Oryza sativa (japonica cultivar-group) BAC83262 BAD30932 transcription factor (bHLH)-like protein/transcription factor (bHLH)-like protein /transcription factor (bHLH)-like protein
52
AT4G33880 = NP_195114 CAA19870 CAB80105 AAM10959 AAO24569 DNA binding/transcription factor /putative protein /putative protein /putative bHLH transcription factor /At4g33880
39
AAT77048 Oryza sativa (japonica cultivar-group) putative transcription factor
2030
ABA99018 Oryza sativa (japonica cultivar-group) Helix-loop-helix DNA-binding domain, putative
ABA94896 Oryza sativa (japonica cultivar-group) Helix-loop-helix DNA-binding domain, putative
6374
Smo_PIL6_29_1 Smo_PIL6_31_2
7
Ppa_PIL6_25_1
Ppa_PIL6902220658_1 Ppa_PIL6_17_1
94
Smo_PIL6_27_1
4255
BAD46515 Oryza sativa (japonica cultivar-group) bHLH protein-like
Smo_PIL6_34_1 Smo_PIL6759724426_1
AT5G37800 = NP_198596 BAB10359 DNA binding/transcription factor /unnamed protein product
AT1G66470 = NP_176820 AAG51154 AAM91513 AAP13428 DNA binding/transcription factor /unknown protein /unknown protein /At1g66470
57
XP_467423 Oryza sativa (japonica cultivar-group) BAD07489 BAD07771 bHLH protein-like/bHLH protein-like /bHLH protein-like
83
NP_908423 Oryza sativa (japonica cultivar-group) BAB39884 unknown protein/unknown protein
50553865
Ppa_PIL6_8_1
Ppa_PIL6_26_1
99
Smo_PIL6_6_2
Smo_PIL6_18_1
100
Smo_PIL6_21_1
3778
Ppa_PIL6_11_1 Ppa_PIL6_13_1
Ppa_PIL6_21_1
76
Ppa_PIL6_15_1 Ppa_PIL6_16_1
Ppa_PIL6_36_1
9284
XP_475810 Oryza sativa (japonica cultivar-group) AAV67820 unknown protein/unknown protein
37
Smo_PIL6_9_1
4879
AT3G19500 = NP_566639 BAB02475 transcription factor/unnamed protein product
AAM61088 Arabidopsis thaliana unknown
1001846
Ppa_PIL6_7_1
Ppa_PIL6_19_1
86
AAF04760 Pinus taeda helix-loop-helix protein 1A
AT4G09180 = NP_192657 CAB78042 AAQ62424 DNA binding/transcription factor /putative protein /At4g09180
AT1G35460 = NP_174776 AAG52112 AAL06481 AAM10958 AAM10410 DNA binding/transcription factor /helix-loop-helix protein 1A, putative; 28707-26892 /At1g35460/F12A4_2 /putative bHLH transcription factor /At1g35460/F12A4_2
88
AT2G42280 = NP_181757 AAB88652 AAU05462 AAU45210 DNA binding/transcription factor /unknown protein /At2g42280 /At2g42280
XP_483255 Oryza sativa (japonica cultivar-group) AAL87667 Oryza sativa BAD10188 Oryza sativa (japonica cultivar-group) putative transcription factor RAU1/transcription factor RAU1 /putative transcription factor RAU1
937439
Ppa_PIL6_22_1
1526
Ppa_PIL6_20_1
Ppa_PIL6_23_1
75
Ppa_PIL6833261970_2
45
Ppa_PIL6_14_1
5798
Smo_PIL6_22_1
Ppa_PIL6_34_1 Ppa_PIL6_35_1
AT2G24260 = NP_180003 AAD03387 BAD44133 BAD44153 DNA binding/transcription factor /unknown protein /putative bHLH transcription factor (bHLH066) /putative bHLH transcription factor (bHLH066)
AAM10955 Arabidopsis thaliana putative bHLH transcription factor
36
AT4G30980 = NP_194827 CAA18195 CAB79816 AAM10956 DNA binding/transcription factor /putative protein /putative protein /putative bHLH transcription factor
391
BAD72512 Oryza sativa (japonica cultivar-group) bHLH transcription factor PTF1-like
Smo_PIL6_8_1
90
Smo_PIL6_5_1
BAD29274 Oryza sativa (japonica cultivar-group) bHLH transcription factor PTF1-like protein
16211
AT5G58010 = NP_200609 BAA97525 DNA binding/transcription factor /unnamed protein product
23
ABB16991 Solanum tuberosum unknown
NP_909951 Oryza sativa (japonica cultivar-group) AAP44685 unknown protein/unknown protein
AT4G02590 = NP_567245 NP_001031577 AAC78259 CAB80752 AAK32915 AAM10948 AAM65759 AAN28890 DNA binding/transcription factor /DNA binding /hypothetical protein /hypothetical protein /AT4g02590/T10P11_13 /putative bHLH transcription factor /putative lip
AT1G03040 = NP_563672 AAD25805 AAK96661 AAM47952 AAL55714 DNA binding/transcription factor /Contains PF|00010 helix-loop-helix DNA-binding domain. ESTs gb|T45640 and gb|T22783 come from this gene. /Unknown protein /unknown protein /putative transcr
96658849
XP_466283 Oryza sativa (japonica cultivar-group) BAD15821 putative bHLH transcription factor PTF1/putative bHLH transcription factor PTF1
AAO73566 Oryza sativa BAD35275 Oryza sativa (japonica cultivar-group) BAD35276 bHLH transcription factor PTF1/bHLH transcription factor PTF1 /putative bHLH transcription factor PTF1
4283
AT1G73830 = NP_177524 AAG52074 BAC43374 AAP04040 DNA binding/transcription factor /putative helix-loop-helix DNA-binding protein; 87971-89290 /putative bHLH transcription factor bHLH050 /putative helix-loop-helix DNA-binding protein
AAW81732 Brassica oleracea putative bZIPtranscription factor protein
AT1G18400 = NP_173276 AAF25996 BAC41942 AAO63332 AAN18283 transcription factor/F15H18.11 /putative bHLH transcription factor bHLH044 /At1g18400 /putative bHLH transcription factor
6691
AT1G25330 = NP_564229 AAG28811 AAM67191 BAD43520 DNA binding/transcription factor /helix-loop-helix protein homolog, putative /helix-loop-helix protein homolog, putative /putative bHLH transcription factor (bHLH075)
94
AAW56931 Oryza sativa (japonica cultivar-group) AAS88824 unknown protein/unknown protein
AT5G50915 = NP_568745 NP_851163 AAL09788 AAL16280 AAM47367 AAM65144 DNA binding/transcription factor /DNA binding /transcription factor /probable DNA-binding protein /unknown protein /At5g50917/At5g50917 /unknown
27
AAD56411 Tulipa gesneriana bHLH transcription factor GBOF-1
20
XP_467373 Oryza sativa (japonica cultivar-group) XP_506932 BAD08039 putative bHLH transcription factor/PREDICTED P0680A05.9 gene product /putative bHLH transcription factor
AT1G10120 = NP_172483 AAT06474 BAD93978 DNA binding/transcription factor /At1g10120 /bHLH transcription factor like protein
25
BAD30156 Oryza sativa (japonica cultivar-group) putative bHLH protein
XP_469986 Oryza sativa (japonica cultivar-group) AAO72370 hypothetical protein/hypothetical protein
56
AAV51936 Gossypium hirsutum bHLH transcription factor
AT1G59640 = NP_849829 NP_564749 BAA87957 AAF79771 AAM64440 AAO42009 AAO50597 AAQ14331 Catharanthus roseus ZCW32; DNA binding/transcription factor /ZCW32; DNA binding /transcription factor /helix-loop-helix protein homolog /T30E16.21 /unknown /puta
4370
AT4G36540 = NP_849508 NP_195372 CAB16839 CAB80320 AAK44046 AAK96779 AAL15228 AAM10947 AAM61556 AAN15707 AAN18284 DNA binding/transcription factor /DNA binding /transcription factor /putative protein /putative protein /unknown protein /Unknown protei
AT2G18300 = NP_849976 NP_565434 AAL06552 AAL77731 AAM10953 AAD15506 transcription factor/transcription factor /At2g18300/T30D6.19 /At2g18300/T30D6.19 /putative bHLH transcription factor /expressed protein
97
AT5G62610 = NP_201067 BAA97208 AAL59926 AAM61143 AAM67556 DNA binding/transcription factor /unnamed protein product /unknown protein /unknown /unknown protein
5129
XP_470616 Oryza sativa (japonica cultivar-group) AAO00689 Hypothetical protein/Hypothetical protein
AT3G57800 = NP_850745 CAB67608 AAM10949 AAM98091 AAO23602 DNA binding/transcription factor /putative protein /putative bHLH transcription factor /AT3g57800/T10K17_10 /AT3g57800/T10K17_10
AT2G42300 = NP_850368 AAD23713 AAL38852 AAM20171 BAD44397 DNA binding/transcription factor /unknown protein /unknown protein /unknown protein /putative bHLH transcription factor (bHLH048)
BAD43347 Arabidopsis thaliana BAD43782 putative bHLH transcription factor (bHLH048)/putative bHLH transcription factor (bHLH048)
93100181
AT3G23690 = NP_189011 BAB01846 AAL38882 AAM20186 DNA binding/transcription factor /unnamed protein product /putative DNA-binding protein /putative DNA-binding protein
ABD64920 Brassica oleracea bHLH transcription factor, putative
650
AT3G07340 = NP_187390 AAF02164 AAM10951 BAD43132 BAD43259 BAD44326 BAD44426 DNA binding/transcription factor /unknown protein /putative bHLH transcription factor /putative bHLH transcription factor (bHLH062) /putative bHLH transcription factor (bHLH
AT5G48560 = NP_199667 BAB10689 AAM10957 AAO22758 AAO64057 DNA binding/transcription factor /unnamed protein product /putative bHLH transcription factor /unknown protein /unknown protein
50
CAE05521 Oryza sativa (japonica cultivar-group) OSJNBa0038P21.14
XP_507300 Oryza sativa (japonica cultivar-group) XP_483417 BAC75416 PREDICTED OJ1191_A10.109 gene product/bHLH transcription factor(GBOF-1)-like /bHLH transcription factor(GBOF-1)-like
274
NP_914823 Oryza sativa (japonica cultivar-group) CAE00874 BAD82399 DNA-binding protein-like protein/TA1 protein /putative bHLH transcription factor
10
Ppa_PIL6_32_1 Ppa_PIL6815715576_1
AT4G34530 = NP_195179 CAA18832 CAB80170 AAM10952 AAM53299 BAC42487 AAO63377 DNA binding/transcription factor /putative protein /putative protein /putative bHLH transcription factor /unknown protein /putative bHLH transcription factor bHLH063 /At4g34
36
Ppa_PIL6_1_1
24
AT1G26260 = NP_173950 NP_973913 NP_001031093 AAG50678 BAC42025 AAO63398 AAS79545 CAG25856 DNA binding/transcription factor /DNA binding /transcription factor /DNA binding /transcription factor /bHLH transcription factor GBOF-1, putative /putative tr
26
Smo_PIL6_12_1
Ppa_PIL6_33_1
1911
Smo_PIL6_19_1
AT1G68920 = NP_849863 NP_177058 NP_001031255 AAG51583 AAM10942 AAM91106 AAN72270 transcription factor/transcription factor /unknown protein /putative DNA-binding protein /putative bHLH transcription factor /At1g68920/T6L1_10 /At1g68920/T6L1_10
2616
AAO38474 Oryza sativa (japonica cultivar-group) AAT77054 putative Helix-loop-helix DNA-binding domain containing protein/putative DNA binding protein
BAD34345 Oryza sativa (japonica cultivar-group) TA1 protein-like
39
XP_483064 Oryza sativa (japonica cultivar-group) BAD09414 bHLH transcription factor-like/bHLH transcription factor-like
47
NP_910691 Oryza sativa (japonica cultivar-group) BAD68029 hypothetical protein/putative TA1 protein
10
Smo_PIL6_10_1 Smo_PIL6759932513_1
Ppa_PIL6_9_1
11
Ppa_PIL6_10_1
Ppa_PIL6_2_1 Ppa_PIL6_3_1
Ppa_PIL6_24_1
38
Ppa_PIL6_5_1
22120076421003238
ABA99246 Oryza sativa (japonica cultivar-group) Helix-loop-helix DNA-binding domain, putative
ABA99773 Oryza sativa (japonica cultivar-group) hypothetical protein LOC_Os12g40710
ABA99775 Oryza sativa (japonica cultivar-group) hypothetical protein LOC_Os12g40730
88
ABA99250 Oryza sativa (japonica cultivar-group) hypothetical protein LOC_Os12g40630
3396
AT4G28790 = NP_194608 CAA22973 CAB81467 transcription factor/putative protein /putative protein
CAE12173 Arabidopsis thaliana putative bHLH127 transcription factor
AT4G28800 = NP_194609 CAA22972 CAB81468 transcription factor/putative protein /putative protein
9240
AT4G00050 = NP_191916 AAM10933 BAC41905 DNA binding/transcription factor /putative bHLH transcription factor /putative bHLH transcription factor bHLH016
AT5G61270 = NP_200935 NP_001032117 BAB08482 AAP86213 AAS79546 CAG25857 BAD95106 DNA binding/transcription factor /DNA binding /transcription factor /unnamed protein product /putative bHLH transcription factor /At5g61270 /hypothetical protein /bHLH t
75
AAB72192 Arabidopsis thaliana bHLH protein
AT1G63650 = NP_176552 NP_974080 D96661 Q9CAD0 AAG52418 AAL55709 EGL3 (ENHANCER OF GLABRA3); DNA binding/transcription factor /EGL3 (ENHANCER OF GLABRA3); DNA binding /D96661 probable transcription factor F24D7.16 /EGL1_ARATH Transcription factor EGL
93
AT5G41315 = NP_680372 BAB08503 AAL36964 GL3 (GLABRA 3); transcription factor/bHLH transcription factor-like protein /bHLH-transcription factor
98
BAE20057 Lilium hybrid division I bHLH transcription factor
NP_918526 Oryza sativa (japonica cultivar-group) BAD44950 BAD45121 putative transcription activator Ra/regulatory protein B-Peru-like /regulatory protein B-Peru-like
P13027 Zea mays CAA33805 CAB92300 ARRS_MAIZE Anthocyanin regulatory R-S protein/unnamed protein product /transcription factor
AAQ01815 Zea mays BHLH protein
989968
AAG25927 Petunia x hybrida AAG25928 anthocyanin 1/anthocyanin 1
BAD18982 Ipomoea purpurea bHLH transcription activator Ivory seed
BAD18983 Ipomoea tricolor BAD18984 bHLH transcription activator Ivory seed/bHLH transcription activator Ivory seed
8947
BAC56998 Perilla frutescens F3G1
832918
AAK19612 Gossypium hirsutum GHDEL61
AAK19613 Gossypium hirsutum GHDEL65
72
AAR21674 Cornus alternifolia myc-like anthocyanin regulatory protein
AAR21672 Cornus oblonga myc-like anthocyanin regulatory protein
99
AAA32663 Antirrhinum majus DEL
AAC39455 Petunia x hybrida bHLH transcription factor JAF13
56626325
Ppa_PIL6_12_1
AT2G46510 = NP_566078 AAD20162 AAM15265 DNA binding/transcription factor /putative bHLH transcription factor /putative bHLH transcription factor
AT1G01260 = NP_171634 AAF97322 AAL55720 AAL84968 AAM10932 AAM53310 AAO42763 DNA binding/transcription factor /Similar to transcription factors /putative transcription factor BHLH13 /At1g01260/F6F3_25 /putative bHLH transcription factor /transcriptio
ABD59338 Pisum sativum G-box element binding protein
5799
CAE04678 Oryza sativa (japonica cultivar-group) OSJNBb0018A10.7
571214
AT2G22770 = NP_850031 AAC63588 AAM10936 BAD44011 NAI1; DNA binding/transcription factor /putative bHLH transcription factor /putative bHLH transcription factor /putative bHLH transcription factor (bHLH020)
47
XP_467577 Oryza sativa (japonica cultivar-group) BAD16085 bHLH protein-like/bHLH protein-like
XP_482542 Oryza sativa (japonica cultivar-group) BAD09830 DNA-binding protein-like/DNA-binding protein-like
AT3G25710 = NP_189199 BAA95758 AAL24228 AAL79583 AAM64450 ABA54263 DNA binding/transcription factor /DNA-binding protein-like /AT3g25710/K13N2_1 /AT3g25710/K13N2_1 /putative HLH DNA-binding protein /ABA-regulated protein AIG1
100444615
AT2G46970 = NP_182220 BAC10689 AAO37214 AAX55166 PIL1 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 1); transcription factor/PIF3 like basic Helix Loop Helix protein /hypothetical protein /hypothetical protein At2g46970
AT3G62090 = NP_191768 BAC10690 PIL2 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 2); transcription factor/PIF3 like basic Helix Loop Helix protein 2
80
AT1G02340 = NP_563650 Q9FE22 AAG40617 AAG45733 AAK15282 HFR1 (LONG HYPOCOTYL IN FAR-RED); DNA binding/transcription factor /HFR1_ARATH Long hypocotyl in far-red 1 (bHLH-like protein HFR1) (Reduced phytochrome signaling) (Basic helix-loop-helix FBI1
34
AT2G20180 = NP_179608 NP_849996 AAD24380 AAN78308 BAC56979 PIL5 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 5); transcription factor/PIL5 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 5); transcription factor /unknown protein /putative bHLH transcription factor
AT4G36930 = NP_568010 Q9FUA4 CAB16798 CAB80359 AAG33640 SPT (SPATULA); DNA binding/transcription factor /SPT_ARATH Protein SPATULA/putative protein /putative protein /SPATULA
XP_468285 Oryza sativa (japonica cultivar-group) AAK98706 BAD19423 hypothetical protein/Putative SPATULA /hypothetical protein
53
BAD67851 Oryza sativa (japonica cultivar-group) basic helix-loop-helix protein SPATULA-like
49
AAV33474 Fragaria x ananassa basic helix-loop-helix protein
74
AT5G67110 = NP_201512 BAB10945 AAM61195 BAD43719 ALC (ALCATRAZ); DNA binding/transcription factor /unnamed protein product /unknown /putative bHLH transcription factor (bHLH073/ALCATRAZ)
83
Smo_PIL6_16_1 Smo_PIL6_26_1
4
ABD33186 Medicago truncatula Basic helix-loop-helix dimerisation region bHLH
ABA99362 Oryza sativa (japonica cultivar-group) ABA99363 ABA99364 BP-5 protein/BP-5 protein /BP-5 protein
CAD32238 Oryza sativa BP-5 protein
52
Smo_PIL6_14_1 Smo_PIL6_1_1
Ppa_PIL6_31_1
Ppa_PIL6_27_1
63
Smo_PIL6_3_1 Smo_PIL6_2_1
38
Ppa_PIL6_4_1
344623
AAT77368 Oryza sativa (japonica cultivar-group) AAU10768 hypothetical protein/hypothetical protein
NP_912624 Oryza sativa (japonica cultivar-group) BAD81566 P0498A12.24/putative BP-5 protein
82
AT1G09530 = NP_849626 NP_172424 O80536 AAC33213 AAC95156 AAC99771 AAL55715 BAC41930 PIF3 (PHYTOCHROME INTERACTING FACTOR 3); DNA binding/transcription factor/transcription regulator /PIF3 (PHYTOCHROME INTERACTING FACTOR 3); DNA binding /transcriptio
4910
NP_911152 Oryza sativa (japonica cultivar-group) BAC19953 BAC21408 transcription factor BHLH9-like protein/transcription factor BHLH9-like protein /transcription factor BHLH9-like protein
7
XP_473908 Oryza sativa (japonica cultivar-group) CAE02150 OSJNBa0058K23.6/OSJNBa0058K23.6
AT2G43010 = NP_565991 NP_850381 Q8W2F3 H84860 AAL55716 CAD29449 PIF4 (PHYTOCHROME INTERACTING FACTOR 4); DNA binding/transcription factor /PIF4 (PHYTOCHROME INTERACTING FACTOR 4); DNA binding /transcription factor /PIF4_ARATH Phytochrome-interacting
AT3G59060 = NP_851021 NP_001030890 NP_191465 NP_001030889 CAB86934 AAM10954 BAC56978 PIL6 (PHYTOCHROME-INTERACTING FACTOR 5); DNA binding/transcription factor /PIL6 (PHYTOCHROME-INTERACTING FACTOR 5); DNA binding /transcription factor /PIL6 (PHYTOCH
921035616921235
0.100