query gene name (RDR4a): global / partial tree
File name:
144 aa residues 57 OTU included.
Results of partial trees included / Partial tree including Ppa.
Assemble Job Id:
Tree job id: Sfm4Wz
BP values out of 100
Analyzed by mobara@nibb.ac.jp
Date: Tue Jul 18 11:39:20 JST 2006
XP_635263 Dictyostelium discoideum AX4 CAC41975 Dictyostelium discoideum EAL61608 RNA-directed RNA polymerase/putative RNA dependent RNA polymerase /RNA-directed RNA polymerase
XP_636093 Dictyostelium discoideum AX4 CAC41974 Dictyostelium discoideum EAL62541 RNA-directed RNA polymerase/putative RNA dependent RNA polymerase /RNA-directed RNA polymerase
100
BAE63521 Aspergillus oryzae unnamed protein product
XP_754927 Aspergillus fumigatus Af293 EAL92889 RNA-directed RNA polymerase Sad-1/RNA-directed RNA polymerase (Sad-1), putative
100
AAK95829 Diaporthe ambigua putative RNA-dependent RNA polymerase
AAL38011 Phomopsis sp. CMW 5588 putative RNA-dependent RNA polymerase
44
AAL78034 Diaporthe perjuncta putative RNA-dependent RNA polymerase RDP-1
10028
EAQ89840 Chaetomium globosum CBS 148.51 hypothetical protein CHGG_06459
XP_329368 Neurospora crassa XP_964248 Neurospora crassa N150 AAK31733 Neurospora crassa EAA35012 hypothetical protein ( (AY029284) suppressor of ascus dominance/hypothetical protein ( (AY029284) suppressor of ascus dominance /suppressor of ascus
91
XP_366672 Magnaporthe grisea 70-15 EAQ71088 hypothetical protein MG02748.4/hypothetical protein MGG_ch7g495
5233
XP_388892 Gibberella zeae PH-1 EAA72413 hypothetical protein FG08716.1/hypothetical protein FG08716.1
63
NP_593295 Schizosaccharomyces pombe 972h- O14227 Schizosaccharomyces pombe CAB11093 hypothetical protein SPAC6F12.09/RDR1_SCHPO RNA-dependent RNA polymerase homolog 1 (Protein rdp1)/SPAC6F12.09
92
XP_369259 Magnaporthe grisea 70-15 hypothetical protein MG06205.4
XP_381758 Gibberella zeae PH-1 EAA67468 hypothetical protein FG01582.1/hypothetical protein FG01582.1
43
BAE65592 Aspergillus oryzae unnamed protein product
XP_660321 Aspergillus nidulans FGSC A4 EAA63015 hypothetical protein AN2717.2/hypothetical protein AN2717.2
90
XP_329481 Neurospora crassa XP_963405 Neurospora crassa N150 CAD70515 Neurospora crassa EAA34169 hypothetical protein/hypothetical protein /related to RNA-directed RNA polymerase /hypothetical protein
4010059
AAQ10792 Branchiostoma floridae RNA-directed RNA polymerase-like protein
NP_493057 Caenorhabditis elegans CAC35914 CAC35915 RNA-dependent RNA polymerase Family family member (rrf-2)/Hypothetical protein M01G12.12 /Hypothetical protein M01G12.12
NP_492132 Caenorhabditis elegans AAF80367 CAB01701 Enhancer of Glp-One (glp-1) family member (ego-1)/RNA-directed RNA polymerase related EGO-1 /Hypothetical protein F26A3.3
CAE57375 Caenorhabditis briggsae Hypothetical protein CBG00321
95
NP_492131 Caenorhabditis elegans AAF80368 CAC42290 RNA-dependent RNA polymerase Family family member (rrf-1)/RRF-1 /Hypothetical protein F26A3.8
81
CAE72312 Caenorhabditis briggsae Hypothetical protein CBG19448
42100
NP_495713 Caenorhabditis elegans CAA88315 CAA91312 RNA-dependent RNA polymerase Family family member (rrf-3)/Hypothetical protein F10B5.7 /Hypothetical protein F10B5.7
CAE57720 Caenorhabditis briggsae Hypothetical protein CBG00730
1009253
NP_918046 Oryza sativa (japonica cultivar-group) BAC00725 putative RNA-directed RNA polymerase/putative RNA-dependent RNA polymerase
AT3G49500 = NP_190519 CAB71285 AAF73959 AAF74208 AAG52184 RDR6 (RNA-DEPENDENT RNA POLYMERASE 6); nucleic acid binding/RNA-directed RNA polymerase-like protein /SGS2 /RNA-dependent RNA polymerase /putative RNA-directed RNA polymerase; 73997-69985
AAU21242 Nicotiana benthamiana putative RNA-dependent RNA polymerase SDE1
64100
Ppa_RDR4_2_1
75
XP_472792 Oryza sativa (japonica cultivar-group) CAE04828 OSJNBb0048E02.13/OSJNBb0048E02.13
AAU21243 Nicotiana benthamiana putative RNA-dependent RNA polymerase RdRP2
AT4G11130 = NP_192851 AAC35535 CAB43048 CAB81214 RDR2 (RNA-DEPENDENT RNA POLYMERASE 2); RNA-directed RNA polymerase/similar to hypothetical proteins in Schizosaccharomyces pombe (GB:Z98533) and C. elegans (GB:Z48334 and Z78419) /putative RNA-directe
93100
Smo_RDR4_1_1
74
Smo_RDR4_4_1
Smo_RDR4_2_1
100
CAA09894 Arabidopsis thaliana AAN64409 RNA-directed RNA polymerase/RNA-dependent RNA polymerase 1
AT1G14790 = NP_172932 AAF79241 RDR1 (RNA-DEPENDENT RNA POLYMERASE 1); RNA-directed RNA polymerase/nucleic acid binding /F10B6.19
100
AAR91037 Hordeum vulgare subsp. vulgare RNA-directed RNA polymerase 2
AAR91036 Hordeum vulgare subsp. vulgare RNA-directed RNA polymerase 1
100
CAA09896 Petunia x hybrida RNA-directed RNA polymerase
CAA09697 Nicotiana tabacum RNA-directed RNA polymerase
AAU90307 Solanum tuberosum RNA-directed RNA polymerase
AAT38684 Solanum demissum AAT38754 AAU89734 Solanum tuberosum RNA-directed RNA polymerase/RNA-directed RNA polymerase /RNA-directed RNA polymerase-like
70
CAA71421 Lycopersicon esculentum RNA-directed RNA polymerase
42
AAT38687 Solanum demissum RNA-directed RNA polymerase
15
AAT38699 Solanum demissum AAU89754 Solanum tuberosum RNA-directed RNA polymerase/RNA-directed RNA polymerase-like
847710044984565856159
CAI39057 Paramecium tetraurelia RNA-dependent RNA polymerase
CAI39056 Paramecium tetraurelia RNA-dependent RNA polymerase
81
EAS06076 Tetrahymena thermophila SB210 RNA dependent RNA polymerase family protein
88
NP_913147 Oryza sativa (japonica cultivar-group) BAD73220 BAD73327 P0419B01.13/unknown protein /unknown protein
NP_913148 Oryza sativa (japonica cultivar-group) BAD73222 BAD73329 P0419B01.14/RNA-dependent RNA polymerase -like /RNA-dependent RNA polymerase -like
100
Smo_RDR4_3_1 Smo_RDR4_5_1
Ppa_RDR4_4_1
Ppa_RDR4_1_1
1008768
AT2G19910 = NP_179581 AAC62125 RNA-directed RNA polymerase/hypothetical protein
AT2G19930 = NP_179583 AAC62123 RNA-directed RNA polymerase/hypothetical protein
46
AT2G19920 = NP_179582 RNA-directed RNA polymerase
10010034
0.100