query gene name (PAT1.njtree3.svg): global / partial tree
File name:
228 aa residues 72 OTU included.
Results of partial trees included / Partial tree including Ppa.
Assemble Job Id:
Tree job id: NBZpT7
BP values out of 100
Analyzed by thirai@nibb.ac.jp
Date: Wed May 24 18:30:55 JST 2006
Ppa_PAT1_31_1
AAX95685 Oryza sativa (japonica cultivar-group) GRAS family transcription factor, putative
98
Smo_PAT1_16_1
Smo_PAT1_18_1
Smo_PAT1_27_1
65
BAC77269 Lilium longiflorum SCARECROW-like protein
NP_915440 Oryza sativa (japonica cultivar-group) BAD81733 P0406G08.7/SCARECROW-like protein
AAT81711 Oryza sativa (japonica cultivar-group) putative transcription factor
3041
XP_493883 Oryza sativa (japonica cultivar-group) AAK73151 Oryza sativa putative SCARECROW gene regulator/putative SCARECROW gene regulator
XP_493882 Oryza sativa (japonica cultivar-group) AAK73150 Oryza sativa AAU44199 Oryza sativa (japonica cultivar-group) putative SCARECROW gene regulator/putative SCARECROW gene regulator /putative scarecrow gene regulator
8693
AT1G07530 = NP_172233 AAF79548 transcription factor/F22G5.9
100100
Smo_PAT1_38_1
4634
Smo_PAT1_1_1
ABA93922 Oryza sativa (japonica cultivar-group) GRAS family transcription factor, putative
94
Ppa_PAT1_16_1
31
Ppa_PAT1_3_1
Ppa_PAT1_23_1
10011
Ppa_PAT1_7_1
Ppa_PAT1_29_1
100
Smo_PAT1_9_1
1008
Ppa_PAT1_25_1
Ppa_PAT1_12_1
100
Smo_PAT1_13_2
86
Q9ST48 Zea mays CAB51557 DWRF8_MAIZE DELLA protein DWARF8 (Protein dwarf-8)/gibberellin response modulator
Q9ST59 Triticum aestivum CAB51555 RHT1_WHEAT DELLA protein RHT-1 (Reduced height protein 1) (Protein Rht-B1/Rht-D1)/gibberellin response modulator
Q8W127 Hordeum vulgare AAL66734 Hordeum vulgare subsp. vulgare SLN1_HORVU DELLA protein SLN1 (Slender protein 1)/nuclear transcription factor SLN1
7562
XP_469478 Oryza sativa (japonica cultivar-group) Q7G7J6 Oryza sativa BAA90749 Oryza sativa (japonica cultivar-group) AAK50137 gibberellin-insensitive protein OsGAI/SLR1_ORYSA DELLA protein SLR1 (Protein SLENDER RICE1) (Gibberellic acid-insensitiv
AAX07462 Oryza sativa (indica cultivar-group) gibberellic acid-insensitive
97100
AT1G66350 = NP_176809 Q9C8Y3 CAA12242 AAG52171 AAL05911 AAL49792 AAM20156 RGL1 (RGA-LIKE 1); transcription factor/RGL1_ARATH DELLA protein RGL1 (RGA-like protein 1) (RGA-like protein)/RGA-like /gibberellin regulatory protein, putative; 49974-51509 /
AT3G03450 = NP_186995 Q8GXW1 AAF01590 RGL2 (RGA-LIKE 2); transcription factor/RGL2_ARATH DELLA protein RGL2 (RGA-like protein 2) (Scarecrow-like protein 19)/RGA1-like protein
BAC42642 Arabidopsis thaliana putative RGA1
100
AT5G17490 = NP_197251 Q9LF53 CAC01893 BAC41902 AAO64840 RGL3; transcription factor/RGL3_ARATH DELLA protein RGL3 (RGA-like protein 3)/RGA-like protein /RGA-like protein /At5g17490
10099
Q8S4W7 Vitis vinifera AAM19210 GAI1_VITVI DELLA protein GAI1 (Gibberellic acid-insensitive mutant protein 1) (VvGAI1)/GAI-like protein 1
Q6EI06 Cucurbita maxima AAQ96164 GAIP_CUCMA DELLA protein GAIP (Gibberellic acid-insensitive phloem protein) (GAIP) (CmGAIP)/gibberellic acid insensitive phloem
Q6EI05 Cucurbita maxima AAQ96165 GAIPB_CUCMA DELLA protein GAIP-B (Gibberellic acid-insensitive phloem protein B) (GAIP-B) (CmGAIP-B)/gibberellic acid insensitive phloem B
100
AT1G14920 = NP_172945 Q9LQT8 CAA75492 AAF79228 AAL25607 AAM98266 GAI (GA INSENSITIVE); transcription factor/GAI_ARATH DELLA protein GAI (Gibberellic acid-insensitive mutant protein) (Restoration of growth on ammonia protein 2)/GAI /F10B6.34 /At1g149
CAA72178 Arabidopsis thaliana RGA2 protein
100
Q5BN22 Brassica rapa AAX33298 RGA2_BRACM DELLA protein RGA2 (RGA-like protein 2) (BrRGA2)/DELLA protein
Q5BN23 Brassica rapa AAX33297 RGA1_BRACM DELLA protein RGA1 (RGA-like protein 1) (BrRGA1)/DELLA protein
54
AT2G01570 = NP_178266 Q9SLH3 CAA72177 AAC67333 AAK97709 AAL06821 AAQ65090 RGA1 (REPRESSOR OF GA1-3 1); transcription factor/RGA_ARATH DELLA protein RGA (Repressor on the ga1-3 mutant) (GAI-related sequence) (Restoration of growth on ammonia protein
CAA75493 Arabidopsis thaliana GRS protein
859610072100
AAY28970 Gossypium hirsutum GIA/RGA-like gibberellin response modulator
Q84TQ7 Gossypium hirsutum AAO62757 GAI_GOSHI DELLA protein GAI (Gibberellic acid-insensitive mutant protein) (GhGAI)/GIA/RGA-like gibberellin response modulator
100
Q7Y1B6 Lycopersicon esculentum AAP22369 GAI_LYCES DELLA protein GAI (Gibberellic acid-insensitive mutant protein)/GAI-like protein
AAM15895 Calycadenia multiglandulosa GIA/RGA-like gibberellin response modulator; DaGAI
AAM15891 Madia sativa GIA/RGA-like gibberellin response modulator; DaGAI
AAM15886 Wilkesia gymnoxiphium AAM15887 GIA/RGA-like gibberellin response modulator; DaGAI-B /GIA/RGA-like gibberellin response modulator; DaGAI-B
AAM15884 Dubautia menziesii AAM15889 Argyroxiphium sandwicense subsp. macrocephalum AAM15890 GIA/RGA-like gibberellin response modulator; DaGAI-B /GIA/RGA-like gibberellin response modulator /GIA/RGA-like gibberellin response modulator; DaGAI-B
AAM15880 Dubautia arborea AAM15881 AAM15882 Dubautia ciliolata subsp. glutinosa AAM15883 GIA/RGA-like gibberellin response modulator; DaGAI-B /GIA/RGA-like gibberellin response modulator; DaGAI-B /GIA/RGA-like gibberellin response modulator; DaGAI-
4270
AAM15888 Argyroxiphium kauense GIA/RGA-like gibberellin response modulator; DaGAI-B
75
AAM15900 Argyroxiphium kauense AAM15901 GIA/RGA-like gibberellin response modulator; DaGAI-A /GIA/RGA-like gibberellin response modulator; DaGAI-A
AAM15905 Dubautia menziesii GIA/RGA-like gibberellin response modulator; DaGAI-A
AAM15906 Dubautia raillardioides GIA/RGA-like gibberellin response modulator; DaGAI-A
42
AAM15899 Argyroxiphium sandwicense subsp. macrocephalum GIA/RGA-like gibberellin response modulator; DaGAI-A
AAM15898 Argyroxiphium sandwicense subsp. macrocephalum GIA/RGA-like gibberellin response modulator; DaGAI-A
33215624961009560537799100843
AT5G52510 = NP_200064 AAD24408 BAB10182 AAM20537 AAM91268 transcription factor/scarecrow-like 8 /SCARECROW transcriptional regulator-like /SCARECROW transcriptional regulator-like /SCARECROW transcriptional regulator-like
AAO72545 Oryza sativa (japonica cultivar-group) BAD27826 scarecrow transcriptional regulator-like protein/putative gibberellin-insensitive protein OsGAI
XP_473634 Oryza sativa (japonica cultivar-group) CAE01834 OSJNBa0064M23.7/OSJNBa0064M23.7
100100
AT1G21450 = NP_173566 AAD24403 AAF21043 AAF87898 AAK76507 AAM20276 AAM61062 SCL1 (SCARECROW-LIKE 1); transcription factor/scarecrow-like 1 /scarecrow-like 1 /scarecrow-like 1 protein /putative scarecrow 1 protein /unknown protein /scarecrow-like 1
NP_915059 Oryza sativa (japonica cultivar-group) BAB90355 BAC06237 scarecrow-like protein/putative chitin-inducible gibberellin-responsive protein /putative chitin-inducible gibberellin-responsive protein
100
Smo_PAT1_19_1
Ppa_PAT1_1_1
Ppa_PAT1_4_1
100
NP_921084 Oryza sativa (japonica cultivar-group) AAM08829 ABB47346 putative SCARECROW gene regulator-like/Putative SCARECROW gene regulator-like /GRAS family transcription factor, putative
AAL31902 Arabidopsis thaliana AAN46855 AT4g17230/dl4650c /At4g17230/dl4650c
AT4G17230 = NP_193456 CAB10504 CAB78726 transcription factor/SCARECROW like protein /scarecrow-like 13 (SCL13)
99
ABD65110 Brassica oleracea GRAS family transcription factor
10044
AT1G50600 = NP_175475 AAF87875 AAG51190 AAK62666 AAK59436 AAN41283 transcription factor/Putative transcription factor /scarecrow-like protein /F17J6.12/F17J6.12 /putative scarecrow protein /putative scarecrow protein
XP_478905 Oryza sativa (japonica cultivar-group) XP_506430 Q8GVE1 Oryza sativa AAL61821 Oryza sativa (japonica cultivar-group) BAC55608 chitin-inducible gibberellin-responsive protein/PREDICTED OJ1127_E01.113 gene product /CIGR2_ORYSA Chitin-indu
57
Q69VG1 Oryza sativa BAD30510 Oryza sativa (japonica cultivar-group) CIGR1_ORYSA Chitin-inducible gibberellin-responsive protein 1/putative chitin-inducible gibberellin-responsive protein
15
AT2G04890 = NP_178566 AAD25580 AAF21044 AAM15339 BAD42973 SCL21 (SCARECROW-LIKE 21); transcription factor/putative SCARECROW gene regulator /scarecrow-like 21 /putative SCARECROW gene regulator /putative SCARECROW gene regulator
AT5G48150 = NP_974903 NP_199626 AAF73237 BAA96995 BAC42147 PAT1 (PHYTOCHROME A SIGNAL TRANSDUCTION 1); transcription factor/PAT1 (PHYTOCHROME A SIGNAL TRANSDUCTION 1); transcription factor /phytochrome A signal transduction 1 protein /SCARECROW gene
61197428505499
0.100