query gene name (RDR6SDE1SGS2.109c): global / partial tree
File name:
149 aa residues 35 OTU included.
Results of partial trees included / Partial tree including Ppa.
Assemble Job Id:
Tree job id: ENpHWZ
BP values out of 100
Analyzed by mobara@nibb.ac.jp
Date: Tue Jun 13 14:37:41 JST 2006
AT2G19930 = NP_179583 AAC62123 RNA-directed RNA polymerase/hypothetical protein
AT2G19920 = NP_179582 RNA-directed RNA polymerase
AT2G19910 = NP_179581 AAC62125 RNA-directed RNA polymerase/hypothetical protein
6699
NP_913148 Oryza sativa (japonica cultivar-group) BAD73222 BAD73329 P0419B01.14/RNA-dependent RNA polymerase -like /RNA-dependent RNA polymerase -like
NP_913147 Oryza sativa (japonica cultivar-group) BAD73220 BAD73327 P0419B01.13/unknown protein /unknown protein
100
EAS06076 Tetrahymena thermophila SB210 RNA dependent RNA polymerase family protein
CAI39056 Paramecium tetraurelia RNA-dependent RNA polymerase
49
XP_571800 Cryptococcus neoformans var. neoformans JEC21 XP_571801 XP_571802 EAL19728 Cryptococcus neoformans var. neoformans B-3501A AAW44493 Cryptococcus neoformans var. neoformans JEC21 AAW44494 AAW44495 hypothetical protein/hypothetical protei
NP_492131 Caenorhabditis elegans AAF80368 CAC42290 RNA-dependent RNA polymerase Family family member (rrf-1)/RRF-1 /Hypothetical protein F26A3.8
CAE72312 Caenorhabditis briggsae Hypothetical protein CBG19448
39
NP_493057 Caenorhabditis elegans CAC35914 CAC35915 RNA-dependent RNA polymerase Family family member (rrf-2)/Hypothetical protein M01G12.12 /Hypothetical protein M01G12.12
35
CAE57375 Caenorhabditis briggsae Hypothetical protein CBG00321
NP_492132 Caenorhabditis elegans AAF80367 CAB01701 Enhancer of Glp-One (glp-1) family member (ego-1)/RNA-directed RNA polymerase related EGO-1 /Hypothetical protein F26A3.3
100100
XP_381758 Gibberella zeae PH-1 EAA67468 hypothetical protein FG01582.1/hypothetical protein FG01582.1
BAE65592 Aspergillus oryzae unnamed protein product
10044
Smo_RDR6SDE1SGS2_8_1
Smo_RDR6SDE1SGS2_4_2
100
Smo_RDR6SDE1SGS2_1_1 Smo_RDR6SDE1SGS2_7_2
36
XP_472792 Oryza sativa (japonica cultivar-group) CAE04828 OSJNBb0048E02.13/OSJNBb0048E02.13
AAU21243 Nicotiana benthamiana putative RNA-dependent RNA polymerase RdRP2
AT4G11130 = NP_192851 AAC35535 CAB43048 CAB81214 RDR2 (RNA-DEPENDENT RNA POLYMERASE 2); RNA-directed RNA polymerase/similar to hypothetical proteins in Schizosaccharomyces pombe (GB:Z98533) and C. elegans (GB:Z48334 and Z78419) /putative RNA-directe
9810043
Ppa_RDR6SDE1SGS2_4_1
AAR91037 Hordeum vulgare subsp. vulgare RNA-directed RNA polymerase 2
AAR91036 Hordeum vulgare subsp. vulgare RNA-directed RNA polymerase 1
100
AT1G14790 = NP_172932 AAF79241 AAN64409 RDR1 (RNA-DEPENDENT RNA POLYMERASE 1); RNA-directed RNA polymerase/nucleic acid binding /F10B6.19 /RNA-dependent RNA polymerase 1
76
CAA09697 Nicotiana tabacum RNA-directed RNA polymerase
CAA71421 Lycopersicon esculentum RNA-directed RNA polymerase
AAT38684 Solanum demissum RNA-directed RNA polymerase
AAU90307 Solanum tuberosum RNA-directed RNA polymerase
AAT38754 Solanum demissum RNA-directed RNA polymerase
53981001001009186
Ppa_RDR6SDE1SGS2_2_1
NP_918046 Oryza sativa (japonica cultivar-group) BAC00725 putative RNA-directed RNA polymerase/putative RNA-dependent RNA polymerase
AAU21242 Nicotiana benthamiana putative RNA-dependent RNA polymerase SDE1
AAF74208 Arabidopsis thaliana RNA-dependent RNA polymerase
AT3G49500 = NP_190519 CAB71285 AAF73959 AAG52184 RDR6 (RNA-DEPENDENT RNA POLYMERASE 6); nucleic acid binding/RNA-directed RNA polymerase-like protein /SGS2 /putative RNA-directed RNA polymerase; 73997-69985
1009110086613547100
0.100