query gene name (TIR1.nx01pt1): global / partial tree
File name:
83 aa residues 63 OTU included.
Results of partial trees included / Partial tree including Ppa.
Assemble Job Id:
Tree job id: 6Yyt2b
BP values out of 100
Analyzed by shino@nibb.ac.jp
Date: Tue Jun 20 22:53:11 JST 2006
AT4G15475 = NP_567467 AAK26038 AAK32821 AAL07187 AAM60829 ubiquitin-protein ligase/putative F-box protein family, AtFBL4 /AT4g15470/dl3775w /putative F-box protein family protein FBL4 /F-box protein family, AtFBL4
ABA95013 Oryza sativa (japonica cultivar-group) F-box protein family, AtFBL4
96
Smo_TIR1_17_1
100
Smo_TIR1_51_1
ABA99529 Oryza sativa (japonica cultivar-group) hypothetical protein LOC_Os12g36670
AT5G27920 = NP_568502 BAC41915 AAO64875 ubiquitin-protein ligase/unknown protein /At5g27920
6311
Ppa_TIR1_19_1
ABA91133 Oryza sativa (japonica cultivar-group) ABA96188 ABA96189 F-box family protein AtFBL3, putative/F-box family protein AtFBL3, putative /F-box family protein AtFBL3, putative
AT5G01720 = NP_568094 AAM14053 AAM67471 ubiquitin-protein ligase/putative F-box protein family, AtFBL3 /putative F-box family protein AtFBL3
843221
Smo_TIR1_35_1 Smo_TIR1_33_1
Smo_TIR1_37_1
549158
XP_873270 Bos taurus PREDICTED: similar to F-box and leucine-rich repeat protein 2
XP_542692 Canis familiaris PREDICTED: similar to F-box and leucine-rich repeat protein 2
NP_036289 Homo sapiens Q9UKC9 AAD56248 AAF03128 AAF04510 BAA91691 AAH31556 CAH93518 Pongo pygmaeus F-box and leucine-rich repeat protein 2/FBXL2_HUMAN F-box/LRR-repeat protein 2 (F-box and leucine-rich repeat protein 2) (F-box protein FBL2/FBL3)/le
CAG33402 Homo sapiens FBXL2
877367
XP_343496 Rattus norvegicus PREDICTED: similar to F-box and leucine-rich repeat protein 2
NP_848739 Mus musculus Q8BH16 BAC30203 BAC32477 BAC41033 AAH96582 BAE24574 BAE37357 F-box and leucine-rich repeat protein 2/FBXL2_MOUSE F-box/LRR-repeat protein 2 (F-box and leucine-rich repeat protein 2)/unnamed protein product /unnamed protein prod
7379
CAG10004 Tetraodon nigroviridis unnamed protein product
74
AAH77969 Xenopus laevis MGC81000 protein
XP_908119 Mus musculus XP_928587 PREDICTED: F-box protein FBL2 isoform 3/PREDICTED: similar to F-box and leucine-rich repeat protein 20 isoform 12
9799
XP_793918 Strongylocentrotus purpuratus PREDICTED: similar to F-box and leucine-rich repeat protein 20
100
Ppa_TIR1_37_1
Ppa_TIR1_5_1
100
Smo_TIR1_9_1
38
AAZ66745 Glycine max coronatine-insensitive 1
AAR82925 Lycopersicon esculentum AAR82926 coronatine-insensitive 1/coronatine-insensitive 1
45
AT2G39940 = NP_565919 O04197 AAB95279 AAC17498 AAK73983 AAM91386 COI1 (CORONATINE INSENSITIVE 1); ubiquitin-protein ligase/COI1_ARATH Coronatine-insensitive protein 1 (F-box/LRR-repeat protein 2) (AtFBL2) (COI-1) (AtCOI1)/coronatine-insensitive 1 (C
98
NP_915536 Oryza sativa (japonica cultivar-group) AAO38719 BAD81943 AAY41186 P0529E05.15/COI1 /COI1 /coronatine-insensitive 1
AAU90110 Oryza sativa (japonica cultivar-group) putative LRR-containing F-box protein
100
NP_912346 Oryza sativa (japonica cultivar-group) AAP06838 unknown protein/unknown protein
5699
Ppa_TIR1_9_1
Ppa_TIR1_7_1
100
Ppa_TIR1_11_1
8948
Smo_TIR1_10_1
Smo_TIR1_25_1
100
Smo_TIR1_6_1
Smo_TIR1_11_1
1002416
Smo_TIR1_21_2 Smo_TIR1_29_2
30
Ppa_TIR1_8_1
Ppa_TIR1_3_1
Ppa_TIR1_2_1
Ppa_TIR1_6_1
96939331
Smo_TIR1_12_1 Smo_TIR1_14_2
5848
Smo_TIR1_1_1 Smo_TIR1_5_1
Smo_TIR1_7_1
Smo_TIR1_16_1
10030
AAK16647 Populus tremula x Populus tremuloides F-box containing protein TIR1
AT5G49980 = NP_568718 BAA97019 AAL08287 AAM98092 AAO42782 ubiquitin-protein ligase/transport inhibitor response 1 protein /AT5g49980/K9P8_12 /AT5g49980/K9P8_12 /AT5g49980/K9P8_12
AT4G24390 = NP_974607 NP_567702 CAB45074 CAB79349 AAM10320 AAP21148 ubiquitin-protein ligase/ubiquitin-protein ligase /transport inhibitor response-like protein /transport inhibitor response-like protein /AT4g24390/T22A6_220 /At4g24390/T22A6_220
8881
XP_507533 Oryza sativa (japonica cultivar-group) XP_506986 XP_467901 XP_467902 BAD19396 BAD19397 PREDICTED OJ1175_B01.8-1 gene product/PREDICTED OJ1175_B01.8-1 gene product /putative F-box containing protein TIR1 /F-box containing protein TIR1-like /
ABA93466 Oryza sativa (japonica cultivar-group) Leucine Rich Repeat, putative
8588
NP_912552 Oryza sativa (japonica cultivar-group) AAN64135 Putative F-box containing protein TIR1/Putative F-box containing protein TIR1
6762
Ppa_TIR1_4_1
Ppa_TIR1_14_1
99
Ppa_TIR1_36_2
Ppa_TIR1_1_1
100100
XP_472325 Oryza sativa (japonica cultivar-group) CAD40545 OSJNBa0072K14.18/OSJNBa0072K14.18
AT3G26810 = NP_566800 BAB01228 AAL32646 AAQ56839 ubiquitin-protein ligase/transport inhibitor response-like protein /transport inhibitor response-like protein /At3g26830
AT1G12820 = NP_563915 AAF78487 AAM20393 AAN72129 IPS1; ubiquitin-protein ligase/Strong similarity to transport inhibitor response 1 (TIR1) from Arabidopsis thaliana gb|AF005047 /transport inhibitor response 1, putative /transport inhibitor response
93
ABA93930 Oryza sativa (japonica cultivar-group) F-box domain, putative
5490
AT4G03190 = NP_567255 AAD14447 CAB77804 AAK01147 AAK76473 AAN12969 GRH1 (GRR1-LIKE PROTEIN 1); ubiquitin-protein ligase/putative homolog of transport inhibitor response 1 /putative homolog of transport inhibitor response 1 /GRR1-like protein 1 /puta
XP_493919 Oryza sativa (japonica cultivar-group) AAV32196 similar to Arabidopsis thaliana transport inhibitor response 1 (TIR1) (T48087)/putative transport inhibitor response TIR1
52
AT3G62980 = NP_567135 Q570C0 AAB69175 AAB69176 CAB87743 AAN71945 TIR1 (TRANSPORT INHIBITOR RESPONSE 1); ubiquitin-protein ligase/TIR1_ARATH TRANSPORT INHIBITOR RESPONSE 1 protein (F-box/LRR-repeat protein 1) /transport inhibitor response 1 /transpor
55566099100
0.100