#NEXUS 
[MacClade 4.08 registered to Hirai, ERATO]


BEGIN DATA;
	DIMENSIONS  NTAX=86 NCHAR=78;
	FORMAT DATATYPE=PROTEIN  SYMBOLS = " 1 2 3 4"  MISSING=? GAP=- ;
MATRIX
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[                                                                                                                                             .         .         .         .         .         .         .        ]

'gi|18411857|ref|NP 567109.1| FUS6 (FUSCA 6) [Arabidopsis thaliana] >gi|15293245|gb|AAK93733.1| putative FUSCA protein FUS6 [Ara'    DAFKNYIRTRDYCTTTKHIIHMCMNAILVSIEMGQFTHVTSYVNKAEQNPETEPMVNAKLRCASGLAHLELKKYKLAA   [78]
gi|432446|gb|AAA32792.1|_FUS6                                    DAFKNYIRTRDYCTTTKHIIHMCMNAILVSIEMGQFTHVTSYVNKAEQNPETEPMVNAKLRCASGLAHLELKKYKLAA   [78]
'gi|26450149|dbj|BAC42193.1| putative FUSCA protein FUS6 [Arabidopsis thaliana]'                                    DAFKNYIRTRDYCTTTKHIIHMCMNAILVSIEMGQFTHVTSYVNKAEQNPETEPMVNAKLRCASGLAHLELKKYKLAA   [78]
'gi|6850881|emb|CAB71044.1| FUSCA PROTEIN FUS6 [Arabidopsis thaliana]'                                    DAFKNYIRTRDYCTTTKHIIHMCMNAILVSIEMGQFTHVTSYVNKAEQNPETEPMVNAKLRCASGLAHLELKKYKLAA   [78]
'gi|7208213|gb|AAF40112.1| constitutive photomorphogenic 11 [Oryza sativa subsp. indica]'                                    DAFKSYIRTRDYCTTSKHIVQMCMNVILVSIELGQFPHVSNYVSKAEQTPDTDPIIVAKLRAAAGLAYLATKKYKLAA   [78]
'gi|10443485|gb|AAG17476.1| rCOP11 protein [Oryza sativa]'                                    DAFKSYIRTRVYCTTSKHIVQMCMNVILVSIELGQFPHVSNYVSKAEQTPDTDPIIVAKLRAAAGLAYLATKKYKLAA   [78]
lcl|Ppa_FUS6_3_1_unnamed_protein_product                                    QAFKCYVRTRDYCTTSKHIIAMCLNVILVSIELGHFVHVSNYVSKADQTPDVDPVVLAKLKCAAGLAHLESKKYKLAA   [78]
lcl|Ppa_FUS6_1_1_unnamed_protein_product                                    QAFQCYVRTRDYCTTSKHIIAMCLNVILVSIELGHFVHVSNYVSKADQTPDVDPVVLAKLKCAAGLAHLESKKYKLAA   [78]
lcl|Smo_FUS6_2_2_unnamed_protein_product                                    QAFKCYVRTRDYCTTSKHIIAMCLNVILVSIELGHFVHVSNYVSKADQTPDIDPIILAKLKCAAGLAYLESKKYKLAA   [78]
lcl|Smo_FUS6_1_2_unnamed_protein_product                                    QAFKCYVRTRDYCTTSKHIIAMCLNVILVSIELGHFVHVSNYVSKADQTPDIDPIILAKLKCAAGLAYLESKKYKLAA   [78]
lcl|15065_Cre_unnamed_protein_product                                    TAFKCYVRTRDYCTTSRHVVAMCLAVIRTALELGNFVHVANYVGKAEATPDVDSVTMAKLRAASGINLLHSRKYKQAA   [78]
'gi|66810608|ref|XP 639011.1| hypothetical protein DDB0215686 [Dictyostelium discoideum] >gi|83776742|gb|ABC46693.1| COP9 signal'    NALKCFIRTRDYCTTSKHVLAMCFNIIKLGVDTQNYTHAPSYIAKAEQSPDLDNVSNAKLRSVNGLYNLDGSRYKLAA   [78]
'gi|76645477|ref|XP 603925.2| PREDICTED: similar to G protein pathway suppressor 1 isoform 1 [Bos taurus] >gi|76645473|ref|XP 87'    NALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEITQAILTKLKCAAGLAELAARKYKQAA   [78]
'gi|67970136|dbj|BAE01412.1| unnamed protein product [Macaca fascicularis]'                                    NALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEITQAILTKLKCAAGLAELAARKYKQAA   [78]
'gi|20981690|sp|Q13098|CSN1 HUMAN COP9 signalosome complex subunit 1 (Signalosome subunit 1) (SGN1) (JAB1-containing signalosome'    NALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEITQAILTKLKCAAGLAELAARKYKQAA   [78]
'gi|47078238|ref|NP 997657.1| G protein pathway suppressor 1 isoform 1 [Homo sapiens] >gi|40352795|gb|AAH64503.1| G protein path'    NALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEITQAILTKLKCAAGLAELAARKYKQAA   [78]
'gi|7512468|pir||G01646 fusca protein homolog Gps1 - human'                                    NALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEITQAILTKLKCAAGLAELAARKYKQAA   [78]
'gi|5670324|gb|AAC50906.2| Gps1 [Homo sapiens]'                                    NALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEITQAILTKLKCAAGLAELAARKYKQAA   [78]
'gi|73964697|ref|XP 540496.2| PREDICTED: similar to G protein pathway suppressor 1 [Canis familiaris]'                               NALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEITQAILTKLKCAAGLAELAARKYKQAA   [78]
'gi|47124897|gb|AAH70633.1| MGC81460 protein [Xenopus laevis] >gi|55976430|sp|Q6NRT5|CSN1 XENLA COP9 signalosome complex subunit'    NALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEITQAVLTKLKCAAGLAELAARKYKQAA   [78]
'gi|75517042|gb|AAI03783.1| Gps1 protein [Mus musculus]'                                    NALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEITQAILTKLKCAAGLAELAARKYKQAA   [78]
'gi|21703742|ref|NP 663345.1| G protein pathway suppressor 1 [Mus musculus] >gi|13097153|gb|AAH03350.1| G protein pathway suppre'    NALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEITQAILTKLKCAAGLAELAARKYKQAA   [78]
'gi|55732991|emb|CAH93182.1| hypothetical protein [Pongo pygmaeus]'                                    NALKCYSRARDYCTSAKHVINMCLNVIRVSVYLQNWSHVLSYVSKAESTPEITQAILTKLKCAAGLAELAARKYKQAA   [78]
'gi|62896575|dbj|BAD96228.1| G protein pathway suppressor 1 isoform 1 variant [Homo sapiens]'                                    NALKCYSRARDYCTSAKHVINMCPNVIKVSVYLQNWSHVLSYVSKAESTPEITQAILTKLKCAAGLAELAARKYKQAA   [78]
'gi|47078240|ref|NP 004118.3| G protein pathway suppressor 1 isoform 2 [Homo sapiens] >gi|49113489|gb|AAH00155.3| G protein path'    NALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEITQAILTKLKCAAGLAELAARKYKQAA   [78]
'gi|32880011|gb|AAP88836.1| G protein pathway suppressor 1 [Homo sapiens] >gi|60654979|gb|AAX32053.1| G protein pathway suppress'    NALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEITQAILTKLKCAAGLAELAARKYKQAA   [78]
'gi|90077490|dbj|BAE88425.1| unnamed protein product [Macaca fascicularis]'                                    NALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEITQAILTKLKCAAGLAELAARKYKQAA   [78]
'gi|72087249|ref|XP 787846.1| PREDICTED: similar to G protein pathway suppressor 1 isoform 1, partial [Strongylocentrotus purpur'    NALKCYSRARDYCTSPKHIINMCLNVIKVSIHLQNWSHVLSYVNKAEATPELNLMVATKLKCAAGLAELATKKYKPAA   [78]
'gi|2494624|sp|P97834|CSN1 RAT COP9 signalosome complex subunit 1 (Signalosome subunit 1) (SGN1) (JAB1-containing signalosome su'    NALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEITQAILTKLKCAAGLAELAARKYKQAA   [78]
'gi|51513284|gb|AAH80478.1| MGC89799 protein [Xenopus tropicalis] >gi|56118350|ref|NP 001007967.1| MGC89799 protein [Xenopus tro'    NALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEITQSVLTKLKCAAGLAELAARKYKQAA   [78]
'gi|26353512|dbj|BAC40386.1| unnamed protein product [Mus musculus]'                                    NALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEITQAILTKLKCAAGLAELAARKYKQAA   [78]
'gi|57525252|ref|NP 001006206.1| G protein pathway suppressor 1 [Gallus gallus] >gi|53128375|emb|CAG31296.1| hypothetical protei'    NALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEITQAILTKLKCAAGLAELAARKYKQAA   [78]
'gi|68360416|ref|XP 685543.1| PREDICTED: similar to G protein pathway suppressor 1 isoform 2 isoform 1 [Danio rerio]'                NALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEINQAVLTKLKCAAGLAELASRKYKPAA   [78]
'gi|68360422|ref|XP 686215.1| PREDICTED: similar to G protein pathway suppressor 1 isoform 2 isoform 1 [Danio rerio]'                NALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEINQAVLTKLKCAAGLAELASRKYKPAA   [78]
'gi|87248505|gb|ABD36305.1| G protein pathway suppressor 1 [Bombyx mori]'                                    SALKCYSRARDYCTSGKHLVMMCLNVVKVSVYLQNWAHVLNYVSKAEATPDFNQSILTRLKCAAGLAELATKKYKSAA   [78]
'gi|66515478|ref|XP 392872.2| PREDICTED: similar to MGC81460 protein [Apis mellifera]'                                    HALKCYSRARDYCTSGKHIVNMCLNVIKVSVYLQNWAHVLSYVTKAESTPDFNQSIVTKLKVAAGLAELATRKYKMAA   [78]
'gi|76645475|ref|XP 887717.1| PREDICTED: similar to G protein pathway suppressor 1 isoform 3 [Bos taurus]'                           NALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEITQAILTKLKCAAGLAELAARKYKQAA   [78]
'gi|54641660|gb|EAL30410.1| GA17754-PA [Drosophila pseudoobscura]'                                    NALKCYSRARDYCTSGKHVVNMCLNVIKVSIYLQNWVHVMSYISKAESTPDFNAQVHTRLECAAGLAELQQKKYKVAA   [78]
'gi|24666528|ref|NP 524152.2| COP9 complex homolog subunit 1 b CG3889-PA [Drosophila melanogaster] >gi|15292255|gb|AAK93396.1| L'    NALKCYSRARDYCTSGKHVVNMCLNVIKVSIYLQNWAHVMSYISKAESTPDFNAQVHTRLECAAGLAELQQKKYKVAA   [78]
'gi|4732103|gb|AAD28605.1| COP9 signalosome subunit 1 CSN1 [Drosophila melanogaster]'                                    NALKCYSRARNYCTSGKHVVNMCLNVIKVSIYLQNWAHVMSYISKAESTPDFNAQVHTRLECAAGLAELQQKKYKVAA   [78]
'gi|21752110|dbj|BAC04120.1| unnamed protein product [Homo sapiens]'                                    NALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEITQAILTKLKCAAGLAELTARKYKQAA   [78]
'gi|55239654|gb|EAA10359.2| ENSANGP00000010862 [Anopheles gambiae str. PEST] >gi|58386780|ref|XP 315051.2| ENSANGP00000010862 [A'    NALKCYSRARDYCTSGKHVVNMCLNVIKVSIYLQNWSHVLSYVSKAEGTAEINQVVITRLKCAAGLAELATRKYKSAA   [78]
'gi|50301228|gb|AAT73769.1| COP9 singlesome subunit 1 [Emericella nidulans]'                                    SAFKAYSRMRDFCTTPSHIASMLFKIINVAIERGDWLNVQSNVHRLRSQGGKQAKHQPKISAAMGLSQLHSGSYLEAA   [78]
'gi|67522068|ref|XP 659095.1| hypothetical protein AN1491.2 [Aspergillus nidulans FGSC A4] >gi|40745465|gb|EAA64621.1| hypotheti'    SAFKAYSRMRDFCTTPSHIASMLFKIINVAIERGDWLNVQSNVHRLRSQGGKQAKHQPKISAAMGLSQLHSGSYLEAA   [78]
'gi|70983534|ref|XP 747294.1| COP9 signalosome subunit 1 [Aspergillus fumigatus Af293] >gi|66844920|gb|EAL85256.1| COP9 signalos'    AASKAYSRMRDYCTTPSHIASMLFKIINVAIERGDWLSVQSNVHRLRNLQSKQAKNQPKISAALGLSQLHSGSYLDAA   [78]
'gi|46111301|ref|XP 382708.1| hypothetical protein FG02532.1 [Gibberella zeae PH-1] >gi|42544919|gb|EAA67762.1| hypothetical pro'    AAAEAYNRMRQDVTTTKHIIDCGIHLVNVYIAKRDWTMVLNNLGKIVGVQSGERMYQPYTKLVSGIALLGLKHYKDAA   [78]
'gi|39941542|ref|XP 360308.1| hypothetical protein MG05682.4 [Magnaporthe grisea 70-15]'                                    DAAEAYSRMRPDVSTSKQVADVGKHIIRVALQKRDWTAVNSSLNRIAGLQSQDLGFPTYIRVMDGLANLGQERYKEAA   [78]
'gi|83765548|dbj|BAE55691.1| unnamed protein product [Aspergillus oryzae]'                                    SASKAYSRMRDYCTTPSHIASMLFKIINVAIERGDWLSVQSHVQRLRNLQSKQAKNQPKMSAAMGLSQLHSGAYLDAA   [78]
'gi|88183543|gb|EAQ91011.1| hypothetical protein CHGG 02946 [Chaetomium globosum CBS 148.51]'                                    AASETFSKMRPDVSTAKQLIDVSKHLVRVCIQRREWDMVSAHLSKIGGAQSAEKAVQPYLKIAYGIAFLGRGRFKDAA   [78]
'gi|78214781|gb|ABB36580.1| CSN-1 [Neurospora crassa] >gi|85081165|ref|XP 956670.1| hypothetical protein [Neurospora crassa N150'    AAMDSFWKMRTEVSSTEQLVDLGKLLVRVAIERRDWKSIGNHLKPLNSVNDSAKALKTYSKIANGIAALGQERYKEAA   [78]
'gi|20129527|ref|NP 609720.1| COP9 complex homolog subunit 1 a CG4697-PA [Drosophila melanogaster] >gi|66770985|gb|AAY54804.1| I'    MAVKFYARARPYCTSSENVINMFRNLIRVSIYMENWWHVLTYIDEAKQYAYGAQEVPARLSCVAGLAHLGLKIYKSAA   [78]
'gi|3873540|emb|CAA22117.1| SPBC215.03c [Schizosaccharomyces pombe] >gi|19113472|ref|NP 596680.1| hypothetical protein SPBC215.0'    SALRSYAKVREYCTNAGQIAHLSLELMRISIWIGNYSHVLAFGSRAKSTVS-AMELTSPIYAYCGLANFCLGDYEEAL   [77]
'gi|55646253|ref|XP 523750.1| PREDICTED: similar to G protein pathway suppressor 1 isoform 2; Arabidopsis FUS6/COP11 homolog [Pa'    NALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEITQAILTKLKCAAGLAELAARKYKQAA   [78]
'gi|54645703|gb|EAL34441.1| GA18363-PA [Drosophila pseudoobscura]'                                    LAVKYYARARQYCTSTDNVINMFRNLIRVSIYMANWWHVLTYIEDAKKYALGAQKVPPQLSCAAGLANMGLKIYKTAA   [78]
'gi|39585384|emb|CAE61706.1| Hypothetical protein CBG05655 [Caenorhabditis briggsae]'                                    EAIRLYSRIRDYCTQLKHSINMWMNWIEVSICGNDWGKLESITSTAFRSLKDIETALAKCQAAQVILKLRNHRYSDVL   [78]
'gi|17566048|ref|NP 507507.1| COP-9 SigNalosome subunit family member (csn-1) [Caenorhabditis elegans] >gi|11065650|emb|CAC14399'    EAIRLYSRIRDYCTQLKHSINMWINWMEVAICANDWGKLDTVTNTAYRSLKDIETALAKCLAAQVLLKLRNKRYSQVV   [78]
lcl|Ppa_FUS6830388009_1_unnamed_protein_product                                    QAFQCYVRTRDYCTTSKHIIAMCLNVILVSIELGHFVHVSNYVSKADQTPDVDPVVLAKLKCAAGLAHLESKKYKLAA   [78]
'gi|57226989|gb|AAW43448.1| cop9 signalosome complex subunit 1, putative [Cryptococcus neoformans var. neoformans JEC21] >gi|582'    EALNYYAATREYSSTPQHHVDLGVGVVETCLAFNYPAPLSGHIAKLETTLDRRRSVMVRAKVGKGLISASQKDWARAG   [78]
'gi|17542010|ref|NP 501632.1| proteasome Regulatory Particle, Non-ATPase-like family member (rpn-7) [Caenorhabditis elegans] >gi'    NALKAYTATYEKTVGMGYRIDVVFAMIRVGLFFLDHHLINKFITKAKELMEQDWERKNRLRSYEALYRMSVRDFAGAA   [78]
'gi|39586398|emb|CAE74055.1| Hypothetical protein CBG21707 [Caenorhabditis briggsae]'                                    NAQKAYTATYEKTVGMGYRIDLVFAMIRVGLFFLDHHLINKYITKAKDLMEQDWERKNRLRSYEALYRMSVRDFAGAA   [78]
'gi|71028774|ref|XP 764030.1| 26S proteasome regulatory subunit [Theileria parva strain Muguga] >gi|68350984|gb|EAN31747.1| 26S'     NTVKVYEQALEKTVGINSKLEIMLTILRAAFFFNDLPLLVKYMEKAKQDIEKDWELRNRLHIYEAVQLMLCRKFKEAT   [78]
'gi|50754507|ref|XP 414416.1| PREDICTED: similar to 26S proteasome non-ATPase regulatory subunit 6 (26S proteasome regulatory su'    GALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNIEKAKSLIEEDWDRRNRLKVYQGLYCVAIRDFKQAA   [78]
lcl|Smo_FUS6_4_2_unnamed_protein_product                                    LTLEQLKITEAKTVAVGHKMDLVFHTLRLAFFFLDCDLISKNIEKAKSLFEEDWERKNRLKVYEGLYCMATRNFKKAA   [78]
'gi|27694784|gb|AAH43825.1| P44s10-prov protein [Xenopus laevis]'                                    GALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKARSLIEEDWDRRNRLKVYQGLYCVAIRDFKQAA   [78]
'gi|72086910|ref|XP 795620.1| PREDICTED: similar to 26S proteasome non-ATPase regulatory subunit 6 (26S proteasome regulatory su'    SCMTVFRKAFDKTVALGHRLDIIFHLIRVGLFWNDNDVITRNIAKAKSMIDEDWDRRNRLKVYQGVYNMSIREFKTSA   [78]
'gi|39795842|gb|AAH64247.1| Proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 [Xenopus tropicalis] >gi|51512952|gb|AAH8'    GALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKARSLIEEDWDRRNRLKVYQGLYCVAIRDFKQAA   [78]
'gi|54038456|gb|AAH84351.1| LOC495148 protein [Xenopus laevis]'                                    GALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKARSLIEEDWDRRNRLKVYQGLYCVAIRDFKQAA   [78]
'gi|37748489|gb|AAH59159.1| Proteasome, 26S, non-ATPase regulatory subunit 6 [Rattus norvegicus] >gi|38454206|ref|NP 942025.1| p'    GALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEDWDRRNRLKVYQGLYCVAIRDFKQAA   [78]
'gi|74354034|gb|AAI02469.1| Proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 [Bos taurus] >gi|77736249|ref|NP 00102982'    GALTAFRRTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEDWDRRNRLKVYQGLYCVAIRDFKQAA   [78]
'gi|13905154|gb|AAH06869.1| Proteasome, 26S, non-ATPase regulatory subunit 6 [Mus musculus] >gi|13397899|emb|CAC34579.1| putativ'    GALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEDWDRRNRLKVYQGLYCVAIRDFKQAA   [78]
'gi|12845617|dbj|BAB26823.1| unnamed protein product [Mus musculus]'                                    GALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEDWDRRNRLKVYQGLYCVAIRDFKQAA   [78]
'gi|55233320|gb|EAA01099.3| ENSANGP00000019902 [Anopheles gambiae str. PEST] >gi|58395080|ref|XP 320986.2| ENSANGP00000019902 [A'    GAITAFRKTYEKTVSLGHRLDIVFHQIRIGLFYLDHDLITRNIDKAKYLIEEDWDRRNRLKVYQGAYCIAIRDFKAAA   [78]
'gi|73985103|ref|XP 541816.2| PREDICTED: similar to 26S proteasome non-ATPase regulatory subunit 6 (26S proteasome regulatory su'    GALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEDWDRRNRLKVYQGLYCVAIRDFKQAA   [78]
gnl|CMER|CMC138C_similar_to_FUSCA_protein_FUS6                                    ESLRYLQMMEARGMQKHELLCWILDILRIHLERGDTSRIEQLAHIAETSLEEDIAEATALQAGLALVALHNGQYRRAV   [78]
'gi|90074922|dbj|BAE87141.1| unnamed protein product [Macaca fascicularis]'                                    GALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEDWDRRNRLKVYQGLYCVAIRDFKQAA   [78]
'gi|7661914|ref|NP 055629.1| proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 [Homo sapiens] >gi|45593848|gb|AAS68366.'    GALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEDWDRRNRLKVYQGLYCVAIRDFKQAA   [78]
'gi|34304592|gb|AAQ63402.1| KIAA0107 isoform [Homo sapiens]'                                    GALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEDWDRRNRLKVYQGLYCVAIRDFKQAA   [78]
'gi|47219021|emb|CAG02059.1| unnamed protein product [Tetraodon nigroviridis]'                                    GALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEDWDRRNRLKVYQGLYCVAIRDFKQAA   [78]
'gi|66826503|ref|XP 646606.1| hypothetical protein DDB0190867 [Dictyostelium discoideum] >gi|60474507|gb|EAL72444.1| hypothetica'    TAVEMYRQTFEKTVPLGQKLDIVFTLIRMGIFWMDHDIVTRNLEKAQSLVEEDWDRKNRLKTYEAVYKMSIRQFKEAS   [78]
'gi|29436940|gb|AAH49452.1| Proteasome, 26S, non-ATPase regulatory subunit 6 [Danio rerio] >gi|41053583|ref|NP 956585.1| proteas'    GALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEDWDRRNRLKVYQGLYCVAIRDFKQAA   [78]
'gi|23508494|ref|NP 701163.1| 26S proteasome regulatory complex subunit, putative [Plasmodium falciparum 3D7] >gi|23496228|gb|AA'    NAFKEYEETYKKGIGMGMKLDILLTMIRICIFYNDVKNLKKYLEQARTQMEKDWERKNKLKIYEALNYIMIRNFAEAS   [78]
'gi|50925283|ref|XP 472939.1| OSJNBa0081L15.15 [Oryza sativa (japonica cultivar-group)] >gi|38346051|emb|CAD41392.2| OJ000223 09'    KALEQLKVTEGKTVAVGQKMDLVFHTLQIGFFYMDFDLISKSIDKAKKLFEEDWERKNRLKVYEGLYCMATRNFKKAA   [78]
'gi|70946144|ref|XP 742817.1| 26S proteasome regulatory complex subunit [Plasmodium chabaudi chabaudi] >gi|56522006|emb|CAH81989'    NSFKEYEAVYEKGIGIGVKLDILLTIIRISIFFNDINSTKKYLEKARAQMEKDWERKNKLKIYEALNYIMIRKFPEAS   [78]
'gi|18416433|ref|NP 567709.1| unknown protein [Arabidopsis thaliana] >gi|42573029|ref|NP 974611.1| unknown protein [Arabidopsis'     KALEQLKLTEGKTVAVGQKMDVVFYTLQLAFFYMDFDLVSKSIDKAKKLFEEDWERKNRLKVYEGLYCMSTRNFKKAA   [78]
lcl|Ppa_FUS6_4_1_unnamed_protein_product                                    NSLEQLKVTEAKTVAVGQKMDLVFHTLRLGFFHLDFNLISRNIDKAKSLFADDWERKNRLKVYEGLYCLATRNFKQAA   [78]
'gi|11281656|pir||T43183 probable 26S proteasome regulatory particle chain RPN7 - fission yeast (Schizosaccharomyces pombe) (fra'    RGVQFCDETFERATLTGMKIDVLFSKIRLAYVYADMRVVGQLLEKLKPLIEKDWERKNRLKAYQGIYLMSIRNFSGAA   [78]
;
END;


BEGIN CODONS;
	CODESET  * UNTITLED = Universal: all ;
END;


BEGIN ASSUMPTIONS;
	OPTIONS  DEFTYPE=unord PolyTcount=MINSTEPS ;
END;


BEGIN MacClade;
	Version 4.0  87;
	LastModified -1063539411;
	FileSettings editor  '0' '0' '1' '1';
	Singles 100;
	Editor 00011001111111100100010010 '1' '8' Geneva '12' '714' '1' all;
	EditorPosition  '46' '7' '969' '1623';
	TreeWindowPosition  '46' '6' '989' '1630';
	ListWindow Characters closed Geneva '9' '50' '10' '273' '359' 000;
	ListWindow Taxa closed Geneva '9' '50' '10' '276' '490' 100000000;
	ListWindow Trees closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow TypeSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow ExSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow CharSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow TaxSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow CharPartitions closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow CharPartNames closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ;
	ChartWindowPosition  '52' '30' '968' '1620';
	StateNamesSymbols closed Geneva '9' '10' '50' '30' '148' '220';
	WindowOrder  Data;
	OtherSymbols &/ 00 ?-;
	Correlation  '0' '0' '1000' '0' '0' 10011010;
	Salmo 00000001;
	EditorFile  '4';
	ExportHTML _ MOSS  '100' 110000;
	PrettyPrint 10;
	EditorToolsPosition  '854' '53' '115' '165';
	TreeWindowProgram 10;
	TreeWindow 0000;
	Continuous  '0' '3' 1;
	Calculations 0000001;
	SummaryMode  '0' '0' 0;
	Charts  Geneva '9' (normal) 0010;
	NexusOptions  '0' '0' '50' 001011001;
	TipLabel  '1';
	TreeFont  Geneva '9' (normal);
	TreeShape  1.0 1.0 0100;
	TraceLabels 0101;
	ChartColors  '0' '0' '65535' '9' '0' 1;
	ChartBiggestSpot 1;
	ChartPercent 10;
	ChartBarWidth  '10' 1;
	ChartVerticalAxis 10101;
	ChartMinMax  '0';
	TraceAllChangesDisplay  '1' 1;
	BarsOnBranchesDisplay  '0' '0' '60000' '10000' '10000' '10000' '10000' '60000' '65000' '65000' '65000' '6' '1' 0000101;
	ContinuousBranchLabels 0;
	AllStatesBranchLabels 1;
	IndexNotation  '2' 1;
	PrintTree  10.00 '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' Geneva '9' (normal) Geneva '10' (normal) Geneva '9' (normal) Geneva '9' (normal) Geneva '9' (bold ) Geneva '9' (normal) Geneva '9' (normal) '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '1' '1' '1' '1' '0' '256' '-39' '4' '-40' '0' '1' '2' '1' '8' '0' '0' '0' '2' 1000111000000000000100000111000;
	MatchChar 00 .;
	EntryInterpretation 01;
	ColorOptions 00;
	TreeTools  '0' '5' '4' '0' '10' '4' '0' 00100111111101110;
	EditorTools  '0' '0' '0' '1000' '0' '0' '6' '3' '1' 100010101110011;
	PairAlign  '2' '2' '3' '2' '1' '1' '2' '1' '3' 1010;
	BothTools  '1';
END;