#NEXUS 
[MacClade 4.08 registered to tetsuya kurata, JST-ERATO]


BEGIN DATA;
	DIMENSIONS  NTAX=34 NCHAR=2985;
	FORMAT DATATYPE=PROTEIN  SYMBOLS = " 1 2 3 4"  MISSING=? GAP=- ;
MATRIX
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'gi|30688577|ref|NP 851056.1| HD2B (HISTONE DEACETYLASE 2B) [Arabidopsis thaliana] >gi|21689603|gb|AAM67423.1| AT5g22650/MDJ22 7'    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME-----------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GVAVT--------------------------------------------------------------------PKNATKVT-PEE--DSLVHI------------------------------------------------------------------------------SQASLDCTV-----KSGESVV-----------------------------------------------------------------------------------------------------------LSVT----------------------------------V--GGAK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVIGTLS-QDKFPQISFD--L-----------------VFDKEFE-LS----------------HSGT--KANVHFIGYKSPNIEQD---------DFT------------------------------------------------------------------------------------------------------------------------------------------------SSD------DEDV--------------------------------PEAVPAP-APTAVTANGNAGAAVVK-----ADTKPKAKPA----------------------------------------------------------------------------------------------------------------------------------------------------------------------EVKPAEEKPESD-EEDES-----------------------------------------------------------------------------------DDED-ESE-------------------------------------------------------------------------------EDDDS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKGMDVDEDDSD----------------------DDEEED--SE-----------------------------------------------------------------------------------------------------------DEE-------------EEET-----------P-KK--PEPI-NKKRPNE-SV-SKTP----------------------------------------------------------------------VSGKKAKPAAAPASTPQKTEE--KKKG--GHTATPHPA-------------------------------------------------KKGGKSP---VNA-------NQ----------------------------------------SPKSGGQ----------------------------SSGG----------------------NNNKKPFNSGKQFGGSN----------NKGSNKGKGKGRA--------------------------------------------------------------------   [306]
'gi|11066137|gb|AAG28473.1| putative histone deacetylase [Arabidopsis thaliana] >gi|2854070|gb|AAC02539.1| putative histone deac'    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME-----------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GVAVT--------------------------------------------------------------------PKNATKVT-PEE--DSLVHI------------------------------------------------------------------------------SQASLDCTV-----KSGESVV-----------------------------------------------------------------------------------------------------------LSVT----------------------------------V--GGAK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVIGTLS-QDKFPQISFD--L-----------------VFDKEFE-LS----------------HSGT--KANVHFIGYKSPNIEQD---------DFT------------------------------------------------------------------------------------------------------------------------------------------------SSD------DEDV--------------------------------PEAVPAP-APTAVTANGNAGAAVVK-----ADTKPKAKPA----------------------------------------------------------------------------------------------------------------------------------------------------------------------EVKPAEEKPESD-EEDES-----------------------------------------------------------------------------------DDED-ESE-------------------------------------------------------------------------------EDDDS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKGMDVDEDDSD----------------------DDEEED--SE-----------------------------------------------------------------------------------------------------------DEE-------------EEET-----------P-KK--PEPI-NKKRPNE-SV-SKTP----------------------------------------------------------------------VSGKKAKPAAAPASTPQKTE---KKKG--GHTATPHPA-------------------------------------------------KKGGKSP---VNA-------NQ----------------------------------------SPKSGGQ----------------------------SSGG----------------------NNNKKPFNSGKQFGGSN----------NKGSNKGKGKGRA--------------------------------------------------------------------   [305]
'gi|18407844|ref|NP 566872.1| HD2A (HISTONE DEACETYLASE 2A); nucleic acid binding / zinc ion binding [Arabidopsis thaliana] >gi|'    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME-----------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GIEVK--------------------------------------------------------------------SGKPVTVT-PEE--GILIHV------------------------------------------------------------------------------SQASLGECKN----KKGEFVP-----------------------------------------------------------------------------------------------------------LHVK----------------------------------V--GNQN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVLGTLS-TENIPQLFCD--L-----------------VFDKEFE-LS----------------HTWG--KGSVYFVGYKTPNIEPQ-----------------------------------------------------------------------------------------------------------------------------------------------------------GYSEE-----EEEE--------------------------------EEEVPAG-----------------------NAAKAVAKP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------KAKPAEVKPAVD-DEEDE-----------------------------------------------------------------------------------SDSD-GMD----------------------------------------------------------------------------EDDSDGED-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SEE-------------EEPT-----------P-KK--PAS--SKKRANE-TT-PKAP----------------------------------------------------------------------VSAKKAKVAV----TPQKTD---EK--------------------------------------------------------------KKGGKAA-------------NQ----------------------------------------SPKSAS-----------------------------QVSC----------------------GSCKKTFNSGNAL-ESH----------NKAKHAAAK------------------------------------------------------------------------   [245]
'gi|2392769|gb|AAB70032.1| putative histone deacetylase [Arabidopsis thaliana]'                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME-----------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GIEVK--------------------------------------------------------------------SGKPVTVT-PEE--GILIHV------------------------------------------------------------------------------SQASLGECKN----KKGEFVP-----------------------------------------------------------------------------------------------------------LHVK----------------------------------V--GNQN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVLGTLS-TENIPQLFCD--L-----------------VFDKEFE-LS----------------HTWG--KGSVYFVGYKTPNIEPQ-----------------------------------------------------------------------------------------------------------------------------------------------------------GYSEE-----EEEE--------------------------------EEEVPAG-----------------------NAAKAVAKP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------KAKPAEVKPAVD-DEEDE-----------------------------------------------------------------------------------SDSD-GMD----------------------------------------------------------------------------EDDSDGED-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SEE-------------EEPT-----------P-KK--PAS--SKKRANE-TT-PKAP----------------------------------------------------------------------VSAKKAKVAV----TPQKTD---EK--------------------------------------------------------------KKGGKAA-------------NQ----------------------------------------SPKSAS-----------------------------QVSC----------------------GSCKKTFNSGNAL-ESH----------NKAKHAAANFFTALNAKCMIV------------------------------------------------------------   [257]
'gi|7804960|gb|AAF70196.1| putative histone deacetylase HD2 [Oryza sativa]'                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME-----------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GLEVK--------------------------------------------------------------------PGQTVKCE-PED--ERFLHL------------------------------------------------------------------------------SQAALGESK-----KGSDNAV-----------------------------------------------------------------------------------------------------------MYVK----------------------------------T--DDQK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVIGTLS-ADKFPQIQFD--L-----------------VFDKEFE-LS----------------HTSK--TASVFFSGYKVSQPAEE---------DEM------------------------------------------------------------------------------------------------------------------------------------------------DFDSEEVEDEEEE--------------------------------EKIIP------APRAN-GKVEGKENEQK--KQGKTDSSASKS--------------------------------------------------------------------------------------------------------------------------------------------------------------------KAAV-----------NDD-----------------------------------------------------------------------------------DDDD-DSA----------------------------------------------------------------------------EDDSQDED----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSPEDDDDDSSED---------------------DSSEDD--ED-----------------------------------------------------------------------------------------------------------ESD-------------EEDT-----------P-KK--PET--GKRKVAE-IV-LKTP----------------------------------------------------------------------SSDKKAKIAT---PSGQKTG---DKKG--VHVATPHPA-------------------------------------------------KQASKTP---VNDKSK----EK----------------------------------------SPKSGGG----------------------------SISC----------------------KSCSKTFNSEMAL-QSH----------SKAKHPAK-------------------------------------------------------------------------   [297]
'gi|50933033|ref|XP 476044.1| unknown protein [Oryza sativa (japonica cultivar-group)] >gi|51854334|gb|AAU10714.1| putative hist'    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME-----------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GLEVK--------------------------------------------------------------------PGQTVKCE-PED--ERFLHL------------------------------------------------------------------------------SQAALGESK-----KGSDNAV-----------------------------------------------------------------------------------------------------------MYVK----------------------------------T--DDQK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVIGTLS-ADKFPQIQFD--L-----------------VFDKEFE-LS----------------HTSK--TASVFFSGYKVSQPAEE---------DEL------------------------------------------------------------------------------------------------------------------------------------------------DFDSEEVEDEEEE--------------------------------EKIIP------APRAN-GKVEGKENEQK--KQGKTDSSASKS--------------------------------------------------------------------------------------------------------------------------------------------------------------------KAAV-----------NDD-----------------------------------------------------------------------------------DDDD-DSD----------------------------------------------------------------------------EDDSEDED----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSPEDDDDDSSED---------------------DSSEDD--ED-----------------------------------------------------------------------------------------------------------ESD-------------EEDT-----------P-KK--PET--GKRKVAE-IV-LKTP----------------------------------------------------------------------SSDKKAKIAT---PSGQKTG---DKKG--VHVATPHPA-------------------------------------------------KQASKTP---VNDKSK----EK----------------------------------------SPKSGGG----------------------------SISC----------------------KSCSKTFNSEMAL-QSH----------SKAKHPAK-------------------------------------------------------------------------   [297]
'gi|81074563|gb|ABB55369.1| histone deacetylase 2a-like [Solanum tuberosum]'                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME-----------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GAEVK--------------------------------------------------------------------SGEPLTVQ-PGD--GMVLHL------------------------------------------------------------------------------SQASLGELKK----DKSESVC-----------------------------------------------------------------------------------------------------------LSVN----------------------------------I--DGKK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVLGTLN-SEKVPQQQFD--L-----------------VFDRDFE-LS----------------HNLK--SGSVYFFGYKATNPFEE---------EED------------------------------------------------------------------------------------------------------------------------------------------------DEDD-----YDES--------------------------------DEDIP------LTLANSGKPEPKEAGKS--NAGKDSASG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------KQKVRIVEPTKD-DEDES-----------------------------------------------------------------------------------SDDD-DSE------------------------------------------------------------------------------LGEDED----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DS-----------------------------------------------------------------------------------------------------------DDS-------------EEET-----------P-KK--AEP--AKKRKAD-SA-TKTP----------------------------------------------------------------------VTD---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [203]
'gi|81074911|gb|ABB55378.1| histone deacetylase-like protein-like [Solanum tuberosum]'                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME-----------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GVEVK--------------------------------------------------------------------AGQTLKVK-PEL--FKLIHV------------------------------------------------------------------------------SQAAIGEVKDV---KEAKYVP-----------------------------------------------------------------------------------------------------------LRLT----------------------------------V--GENS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVIGTLS-AEDRPQLMFD--L-----------------VFEKEFE-LS----------------HGWK--NGSVHFIGYTADDPSGD---------EID------------------------------------------------------------------------------------------------------------------------------------------------SGDDV----FSDE--------------------------------ENVLE--------ALN-GKLEADVKDVK--PDAKKSAPVKD--------------------------AK-----------------------------------------------------------------------------------------------------------------------------------------NAKVAESKKEAESDEDDS-----------------------------------------------------------------------------------DDED-DS-----------------------------------------------------------------------------EDDSDVPLG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDG----------------------------------PEGMDFSGDS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [191]
'gi|76160994|gb|ABA40460.1| histone deacetylase-like protein [Solanum tuberosum]'                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME-----------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GVEVK--------------------------------------------------------------------AGQTLKVK-PEL--FKLIHV------------------------------------------------------------------------------SQAAIGEVKDV---KEAKYVP-----------------------------------------------------------------------------------------------------------LRLT----------------------------------V--GENS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVIGTLS-AEDRPQLMFD--L-----------------VFEKEFE-LS----------------HGWK--NGSVHFIGYTADDPSGD---------EID------------------------------------------------------------------------------------------------------------------------------------------------SGDDV----FSDE--------------------------------ENVLE--------ALN-GKLEADVKDVK--PDAKKSAPVKD--------------------------VK-----------------------------------------------------------------------------------------------------------------------------------------NAKVAESKKEAESDEDDS-----------------------------------------------------------------------------------DDED-DS-----------------------------------------------------------------------------EDDSDVPLG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDG----------------------------------PEGMDFSGDSED----D-----------------DDSE----ED-----------------------------------------------------------------------------------------------------------DDS-------------ERKR-----------H-LK--RLS---RRRDQ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LH----------LLK------------------------------------------------------------------------------   [223]
'gi|33667906|gb|AAQ24532.1| histone deacetylase [Solanum chacoense] >gi|73919938|sp|Q6V9I6|HD2A SOLCH Histone deacetylase 2a (HD'    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME-----------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GAEVK--------------------------------------------------------------------SGEPLTVQ-PGD--GMVLHL------------------------------------------------------------------------------SQASLGELKK----DKSESVC-----------------------------------------------------------------------------------------------------------LSVN----------------------------------I--DGKK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVLGTLN-SEKVPQQQFD--L-----------------VFDRDFE-LS----------------HNLK--SGSVYFFGYKATNPFEE---------EED------------------------------------------------------------------------------------------------------------------------------------------------DEDD-----YDES--------------------------------DEDIP------LTLANSGKPEPKEAGKS--NAGKDSASG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------KQKVRIVEPTKD-DEDES-----------------------------------------------------------------------------------SDDD-DSD------------------------------------------------------------------------------MGEDED----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DS-----------------------------------------------------------------------------------------------------------DDS-------------EEET-----------P-KK--AEP--AKRRKAD-SA-TKTP----------------------------------------------------------------------VTDKKAKLTT-----PQKTD---GKKG-GGHVATPHPS-------------------------------------------------KQASK---------------------------------------------------------TPKSAG-----------------------------SHHC----------------------KPCNRSFGSEGAL-DSH----------SKAKHSAGK------------------------------------------------------------------------   [269]
'gi|78191430|gb|ABB29936.1| deacetylase-like protein [Solanum tuberosum]'                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME-----------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GVEVK--------------------------------------------------------------------AGQTLKVK-PEL--FKLIHV------------------------------------------------------------------------------SQAAIGEVKDV---KEAKYVP-----------------------------------------------------------------------------------------------------------LRLT----------------------------------V--GENS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVIGTLS-AEDRPQLMFD--L-----------------VFEKEFE-LS----------------HGWK--NGSVHFIGYTADDPSGD---------EID------------------------------------------------------------------------------------------------------------------------------------------------SGDDV----FSDE--------------------------------ENVLE--------ALN-GKLEADVKDVK--PDAKKSAPVKD--------------------------VK-----------------------------------------------------------------------------------------------------------------------------------------NAKVAESKKEAESDEDDS-----------------------------------------------------------------------------------DDED-DS-----------------------------------------------------------------------------EDDSDVPLG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDG----------------------------------PEGMDFSGDSED----D-----------------DDSE----ED-----------------------------------------------------------------------------------------------------------DDS-------------EEET-----------P-KK--VEQ---KKRPAP-SP-KVAP----------------------------------------------------------------------GSGKKAKQAT----PDNKSG---GKKG----PATPF-A-------------------------------------------------KQNGKPA---FNGNNKPK--TQ----------------------------------------SPKSGGQ----------------------------FSGN----------------------KSNNKNFSGQKNFKGKQ----------GRK------------------------------------------------------------------------------   [299]
'gi|84468402|dbj|BAE71284.1| putative histone deacetylase [Trifolium pratense]'                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME-----------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GTEVK--------------------------------------------------------------------SGESLKVE-PED--DKIIHL------------------------------------------------------------------------------SAACLGEVSKD---KGGEPVS-----------------------------------------------------------------------------------------------------------LYVK----------------------------------I--DNQK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQLGTLS-SEKIPQISFD--L-----------------VFEKEFE-LS----------------HNWK--YGSIFFTGFKMESLLVS---------DD-------------------------------------------------------------------------------------------------------------------------------------------------DEDS-----DDSI--------------------------------EEDNP------VNAAN-GKPEVEVK-----NGAKPGVNE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------AQQNKTSDPKKKQKDIEN------------------------------------------------------------------------------DVSADDEED-SSE------------------------------------------------------------------------TDSDEDSSEDEP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VANGQIESSDDE----------------------DDSEED--DE-----------------------------------------------------------------------------------------------------------DSD-------------DEET-----------P-KK--TEG--GTKRVAE-SS-KKTP----------------------------------------------------------------------VAVKRAKFAT-----PEKTG---SKNG--VHVDTPYP--------------------------------------------------KQTVKSG---ANNKPPMK--QQ----------------------------------------TPQSTG-----------------------------DYSC----------------------KPCKRSFKTEDAL-GSH----------NRAKHSAK-------------------------------------------------------------------------   [304]
'gi|7716948|gb|AAF68624.1| histone deacetylase 2 isoform b [Zea mays] >gi|73919941|sp|Q9M4U5|HD2B MAIZE Histone deacetylase 2b ('    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME-----------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GLEVK--------------------------------------------------------------------PGSTVKCE-PGH--GFILHV------------------------------------------------------------------------------SQAALGES------KKSDSAL-----------------------------------------------------------------------------------------------------------MYVK----------------------------------V--DDKK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAIGTLS-IDKYPQIQFD--L-----------------VFNKEFE-LS----------------HTSK--TTSVFFSGYKVEQPIEG---------DEM------------------------------------------------------------------------------------------------------------------------------------------------DLDSE----DEEE--------------------------------ELNIP------VIKEN-GKADGKEEQK---NQEKAVAATASK--------------------------------------------------------------------------------------------------------------------------------------------------------------------SSLGLEKKSKDDSDDSDE-----------------------------------------------------------------------------------DESD-DSD----------------------------------------------------------------------------EDDSDDSD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EGEGLSPDEGDDDSSDE---------------------DDTSDD---------------------------------------------------------------------------------------------------------------DEE-------------ETPT-----------P-KK--PEA--GKKRGAE-NA-LKTP----------------------------------------------------------------------LSDKKAKVAT---PPAQKTG---GKKG-ATHVATPHPA-------------------------------------------------K--GKTP---ANNDKLT---EK----------------------------------------SPKSGG-----------------------------SVPC----------------------KSCSKTFNSEMAL-QAH----------SKAKHGAK-------------------------------------------------------------------------   [303]
'gi|7716950|gb|AAF68625.1| histone deacetylase 2 isoform c [Zea mays] >gi|73919943|sp|Q9M4U4|HD2C MAIZE Histone deacetylase 2c ('    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME-----------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GLEVK--------------------------------------------------------------------PGSTVKCE-PGY--GFVLHL------------------------------------------------------------------------------SQAALGES------KKSDNAL-----------------------------------------------------------------------------------------------------------MYVK----------------------------------I--DDQK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAIGTLS-VDKNPHIQFD--L-----------------IFDKEFE-LS----------------HTSK--TTSVFFTGYKVEQPFEE---------DEM------------------------------------------------------------------------------------------------------------------------------------------------DLDSE----DEDE--------------------------------ELNVP------AVKEN-GKADEK-KQK---SQEKAVAAPSKS--------------------------------------------------------------------------------------------------------------------------------------------------------------------SP--DSKKSKDD-DDSDE-----------------------------------------------------------------------------------DETD-DSD----------------------------------------------------------------------------EDETDDSD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EGLSPEEGDDDSSDE---------------------DDTSDD---------------------------------------------------------------------------------------------------------------EEE-------------DTPT-----------P-KK--PEV--GKKRAAE-SSVLKTP----------------------------------------------------------------------LSDKKAKVAT---PSSQKTG---GKKGAAVHVATPHPA-------------------------------------------------K--GKTI---VNNDKSVKSPKS----------------------------------------APKSG-------------------------------VPC----------------------KSCSKSFISETAP-QAH----------SKAKHGGK-------------------------------------------------------------------------   [300]
'gi|73919937|sp|O24591|HD2A MAIZE Histone deacetylase 2a (HD2a) (Zm-HD2a) (Nucleolar histone deacetylase HD2-p39) >gi|3650466|gb'    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME-----------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GLEVK--------------------------------------------------------------------PGSTVKCE-PGY--GFVLHL------------------------------------------------------------------------------SQAALGES------KKSDNAL-----------------------------------------------------------------------------------------------------------MYVK----------------------------------I--DDQK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAIGTLS-VDKNPHIQFD--L-----------------IFDKEFE-LS----------------HTSK--TTSVFFTGYKVEQPFEE---------DEM------------------------------------------------------------------------------------------------------------------------------------------------DLDSE----DEDE--------------------------------ELNVP------VVKEN-GKADEK-KQK---SQEKAVAAPSKS--------------------------------------------------------------------------------------------------------------------------------------------------------------------SP--DSKKSKDD-DDSDE-----------------------------------------------------------------------------------DETD-DSD----------------------------------------------------------------------------EDETDDSD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EGLSSEEGDDDSSDE---------------------DDTSDD---------------------------------------------------------------------------------------------------------------EEE-------------DTPT-----------P-KK--PEV--GKKRPAE-SSVLKTP----------------------------------------------------------------------LSDKKAKVAT---PSSQKTG---GKKGAAVHVATPHPA-------------------------------------------------K--GKTI---VNNDKSVKSPKS----------------------------------------APKSGG-----------------------------SVPC----------------------KPCSKSFISETAL-QAH----------SRAKMGASESQVQ--------------------------------------------------------------------   [307]
'gi|14550106|gb|AAK67143.1| HD2 type histone deacetylase HDA106 [Zea mays]'                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME-----------------------V---------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------GQEVK--------------------------------------------------------------------PGATVSCK-VGD--GLVIHL------------------------------------------------------------------------------SQAALGESK-----KASENAI-----------------------------------------------------------------------------------------------------------LSVN----------------------------------I--DDKK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVLGTLS-VEKHPQISCD--L-----------------VFDKDFE-LP----------------HNSK--TRSVFFRGYKSPVPLFE---------SNS------------------------------------------------------------------------------------------------------------------------------------------------GEDS-----SDEE------------------------------LKTDQIPLQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NNEIKISAAKVPAKDDDDDVFIILAMMMMIYS---------------------------------------------------------------------SDDD-DDD----------------------------------------------------------------FTTSDSDNEMSEEDDSSDED---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EMSEEDDSSDEDEMSGGA-----------------DPSDDSSDES-----------------------------------------------------------------------------------------------------------GSE-------------HTSA-----------P-KK--TDVVVGKKRAIK----AEAP-----------------------------------------------------------------------YGKKAKSEQ----SSQKTG---------DKASTSHPA-------------------------------------------------KQSIKTPADKSRKTPTADKK------------------------------------------SPKSGSHGCK---------------------------------------------------------------------------------------------------------------------------------------------------------------   [286]
'gi|22597156|gb|AAN03465.1| nucleolar histone deacetylase HD2-P39 [Glycine max] >gi|73919939|sp|Q8LJS2|HD2A SOYBN Histone deacet'    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME-----------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GVEVK--------------------------------------------------------------------VGQTVTVD-PMDPVDSYIHI------------------------------------------------------------------------------SQVALGEAKKD---KPNEPVV-----------------------------------------------------------------------------------------------------------LYLK----------------------------------V--GEQK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVLGTLS-RDGIPHLSLD--L-----------------VLDSDSE-LS----------------HTSK--SASVFFCGYKVLTGNDN---------ASD------------------------------------------------------------------------------------------------------------------------------------------------FSDSS----EEDE--------------------------------ELALE--------GQDNGKPELKAEGAKVTKPSKSIPKI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GAPAKAADPKKD-EDDDS-----------------------------------------------------------------------------------DDES-DDD-------------------------------------------------------------------------LAGEDESGSSD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EMDD----------------------DSNSEE--ES-----------------------------------------------------------------------------------------------------------DGD-------------DEET-----------PAKK--VDQ--GKKRPNE-SA-AKTP----------------------------------------------------------------------ISAKKAKTAT-----PEKTD---GKKS--VHVATPHPS-------------------------------------------------KKGGKTPNSTK---------GQ----------------------------------------TPNSAG-----------------------------QLSC----------------------ASCKKSFTNEAGL-QQH----------KKAKHGGQ-------------------------------------------------------------------------   [295]
'gi|30680179|ref|NP 195994.2| HD2C (HISTONE DEACETYLASE 2C); nucleic acid binding / zinc ion binding [Arabidopsis thaliana]'         -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME-----------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GVEVK--------------------------------------------------------------------NGKPLHLD-PGL--DRLVHI------------------------------------------------------------------------------SQVALGESKN----NVTEPIQ-----------------------------------------------------------------------------------------------------------LYVT----------------------------------V--GSDK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLIGTLS-HEKFPQLSTE--I-----------------VLERNFA-LS----------------HTWK--NGSVFFSGYK-------------------------------------------------------------------------------------------------------------------------------------------------------------------PEDL-----IDDQ--------------------------------LEAAGFK-------------------AAPKSAAKQVNF------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLPNEDVKAKQD-DDADG-----------------------------------------------------------------------------------SEED-SSD-------------------------------------------------------------------------DDDSENSGDEE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EEKVTAESDSEE----------------------DDSSDD-EED-----------------------------------------------------------------------------------------------------------DSS-------------EEET-----------P-KK--PEE--PKKRSAEPNS-SKNP----------------------------------------------------------------------ASNKKAKFVT-----PQKTD---SKKP-HVHVATPHPS-------------------------------------------------KQAGKNSGGGSTGETSKQ--QQ----------------------------------------TPKSAG-----------------------------AFGC----------------------KSCTRTFTSEMGL-QSH----------TKAKHSAAA------------------------------------------------------------------------   [287]
'gi|7340659|emb|CAB82939.1| histone deacetylase-like protein [Arabidopsis thaliana]'                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME-----------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GVEVK--------------------------------------------------------------------NGKPLHLD-PGL--DRLVHI------------------------------------------------------------------------------SQVALGESKN----NVTEPIQ-----------------------------------------------------------------------------------------------------------LYVT----------------------------------V--GSDK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLIGTLS-HEKFPQLSTE--I-----------------VLERNFA-LS----------------HTWK--NGSVFFSGYK-------------------------------------------------------------------------------------------------------------------------------------------------------------------PEDL-----IDDQ--------------------------------LEAAGFK----------GKWGLLYPPAAPKSAAKQVNF------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLPNEDVKAKQD-DDADG-----------------------------------------------------------------------------------SEED-SSD-------------------------------------------------------------------------DDDSENSGDEE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EEKVTAESDSEE----------------------DDSSDD-EED-----------------------------------------------------------------------------------------------------------DSS-------------EEET-----------P-KK--PEE--PKKRSAEPNS-SKNP----------------------------------------------------------------------ASNKKAKFVT-----PQKTD---SKKP-HVHVATPHPS-------------------------------------------------KQAGKNSGGGSTGETSKQ--QQ----------------------------------------TPKSAG-----------------------------AFGC----------------------KSCTRTFTSEMGL-QSH----------TKAKHSAAA------------------------------------------------------------------------   [296]
'gi|21360990|gb|AAM49770.1| HDT3 [Arabidopsis thaliana] >gi|22655422|gb|AAM98303.1| At5g03740/F17C15 160 [Arabidopsis thaliana]'     -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME-----------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GVEVK--------------------------------------------------------------------NGKPLHLD-PGL--DRLVHI------------------------------------------------------------------------------SQVALGESKN----NVTEPIQ-----------------------------------------------------------------------------------------------------------LYVT----------------------------------V--GSDK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLIGTLS-HEKFPQLSTE--I-----------------VLERNFA-LS----------------HTWK--NGSVFFSGYKVDASDPE------------------------------------------------------------------------------------------------------------------------------------------------------------PEDL-----IDDQ--------------------------------LEAAGFK-------------------AAPKSAAKQVNF------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLPNEDVKAKQD-DDADG-----------------------------------------------------------------------------------SEED-SSD-------------------------------------------------------------------------DDDSENSGDEE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EEKVTAESDSEE----------------------DDSSDD-EED-----------------------------------------------------------------------------------------------------------DSS-------------EEET-----------P-KK--PEE--PKKRSAEPNS-SKNP----------------------------------------------------------------------ASNKKAKFVT-----PQKTD---SKKP-HVHVATPHPS-------------------------------------------------KQAGKNSGGGSTGETSKQ--QQ----------------------------------------TPKSAG-----------------------------AFGC----------------------KSCTRTFTSEMGL-QSH----------TKAKHSAAA------------------------------------------------------------------------   [294]
'gi|84453192|dbj|BAE71193.1| putative Nucleolar histone deacetylase [Trifolium pratense]'                                    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MESPME-----------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GAEVK--------------------------------------------------------------------VGESVKVD-PEL---GYIHI------------------------------------------------------------------------------SQAALGEVKKD---KATEPVV-----------------------------------------------------------------------------------------------------------VYVK----------------------------------V--DGQK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVLGTLI-KDAIPHTTLN--I-----------------VLDRVAE-LS----------------HNSK--NAAVYFSGYKVLDDGDF-----------------------------------------------------------------------------------------------------------------------------------------------------------DDSDE-----SDSE--------------------------------AELAPLT-EPAEAAKELGKPAAETGAVA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KQVVKRVKVEGE-SDSDS-----------------------------------------------------------------------------------SEEF-DSD----------------------------------------------------------------------------SEDSESEE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ETPTPVKKVDQGKSMKGTNKNAPKAPVPTKKTKIATPEKTDSDSDDDISDE---------------------DISDDDISDE-----------------------------------------------------------------------------------------------------------DSS-------------DEET-----------P-VQ--KGK--NNKRPNE-AA-PQTP----------------------------------------------------------------------VSAKRAKNAT-----PGKTD---DKKA--VHIATPHPN-------------------------------------------------KKGGKTPQNGAK--------DQ----------------------------------------SPSSSK----------------------------------------------------------------------------------SKKSNQGRR------------------------------------------------------------------------   [316]
'gi|50902322|ref|XP 463594.1| histone deacetylase HD2-like protein [Oryza sativa (japonica cultivar-group)]'                         MWWKPREAAGVHVIGGGGSDQFFPIPRVTEKEHSRVGISSSRRRGSGTRRRSWSHTRGGSRSSLADLCSGAGTGGGGGRDANYDVLVPSSFVRTDGCGGGDGDRFPPVHTFGFGKDHDAVAMHTIAEVTGGTFSFIENKAAIQDGFAQYIGGLLNVAVQEFHFDAETWRGPDGPRVHERGRRRGGGVRRRRALRGVRVEAIDDIALERKFRRLDENSVVVSFMQCYHHVACHDGFKESDDDLGFTLCDDYYSPPPKLVDFVADHPHCCDRSPRRATPCEDDGLRPLLDDEALRGRGARPPPLLLCSPSPLRPLVHASPPKCCPARRPPRALIGLPPSPGEKGEEREMKRGEMGREEEEEEGRGARRGEERRGKEGEATGNAIAFVPPMETTMG-----------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GVAVR--------------------------------------------------------------------PGETVMCD-PPG--EFYYHI------------------------------------------------------------------------------SQIALEP------GELNENVQ-----------------------------------------------------------------------------------------------------------VFGE----------------------------------V--DGKR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILLGTLS-VEHRPQLSID--L-----------------VFEKEFE-LL----------------HTSK--TYNIFFSGYQAADARRY---------PFAFIMIF------------------------------------------------------------------------------------------------------------------------------------------LQINHECDVSGDES--------------------------------DEEVPLA-IPLFPNSDDDKIKEVQNSPSKFATLKSAAAASPTP------------------------EA-----------------------------------------------------------------------------------------------------------------------------------------IVEERKNYGKSEADDDDS-----------------------------------------------------------------------------------DEES-DAS---------------------------------------------------------------------------GEDEYDDDE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DMIDKQ-----------------DSSDDD--GD-----------------------------------------------------------------------------------------------------------SSD-------------EEET-----------P-SK--ILCAGTGKRSGY-VH-VATP----------------------------------------------------------------------YPAKQAKKTP----VNNDMA---KQSSGYVHVATPYPA-------------------------------------------------KQAKKRT---ANN-------DM----------------------------------------SEHSAGY----------------------------AC------------------------KPCNK-------------------------------------------------------------------------------------------------------   [688]
lcl|Ppa_HDT2_1_1_unnamed_protein_product                                    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------?FNRHYMNVELSGGTGVEVP--------------------------------------------------------------------PGKPTSCP-PGD--GMHLHV------------------------------------------------------------------------------SQAALGKSKAKSG-KENERVI-----------------------------------------------------------------------------------------------------------LKVL----------------------------------V--DDSE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVLGTLS-EGKCDQMQLD--L-----------------VFDREFK-VS----------------HSSS--SSSIYLCGYRTECPEEY---------DSE--------------------------------------------------------------------------------------------------------------------------------------------------DEHEDEEEDDE-------------------------------EDANVPAA-VPIEHKA--GKVITEVAGKAATAAANAV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QKAVKKQVVQDDVS-----------------------------------------------------------------------------------DEED-DEE------------------------------------------------------------------------------DSDD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [187]
lcl|Smo_HDT2_1_1_unnamed_protein_product                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME-----------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GVKVL--------------------------------------------------------------------PSKSIKCP-VED--SSYLHI------------------------------------------------------------------------------SNAALGEVGSS---AKNERVI-----------------------------------------------------------------------------------------------------------LRLK----------------------------------T--QGEE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVLGTLI-PGQRDHIALD--L-----------------IISKSFQ-LS----------------HNSS--TLAVHFSGYRTEGSGEL---------QEL------------------------------------------------------------------------------------------------------------------------------------------------DREHDHGVRKENG--------------------------------NVKVPLGS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDSDSESDSDDDDDDDDD--------------------------------------------------------------------------------DDGDDDD-DDD-----------------------------------------------------------------------------DDEDDDE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VNAKDLALRQAM-----------MESDDDDDDDIDEGDD-----------------DDNDDDDDDD-----------------------------------------------------------------------------------------------------------DDD-------------EEID-------------EEDLRARLPT----------MLFA----------------------------------------------------------------------DGKEESSGSSYAT-----GSKEDQNAI------------------------------------------------------------RENANSTKVR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [251]
lcl|Ppa_HDT2_3_1_unnamed_protein_product                                    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------?ISDKPYLLLNANYTVFSDFFSALNYTFFSVKLDVLPAGCHDGFRIDLSQRFCVGAGVEVR--------------------------------------------------------------------AGKPTQCS-PGE--GMYLHV------------------------------------------------------------------------------SQAALGESKAKGG-KGSERVV-----------------------------------------------------------------------------------------------------------LKVH----------------------------------V--DGSD---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVLGTLA-EGRCDQMPLD--L-----------------VFDSDFS-VS----------------HSSS--SSSIFLCGYRTEGPREY---------DSE------------------------------------------------------------------------------------------------------------------------------------------------DEDEEEDEEDEDE-------------------------------EDAGVPVA-VPIKANGAAAEMLSKVTDKAAAAVANAIA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGIEKKVVKKQVIQDDSS-----------------------------------------------------------------------------------DEED-DSE------------------------------------------------------------------------------DSDDSDE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [240]
'gi|30683663|ref|NP 565661.2| HDT4 [Arabidopsis thaliana] >gi|30793819|gb|AAP40362.1| unknown protein [Arabidopsis thaliana] >gi'    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME-----------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GIEIK--------------------------------------------------------------------PGKPFKVI-QKD--GFMVHA------------------------------------------------------------------------------SQVTLGDVEKV---KKDETFA-----------------------------------------------------------------------------------------------------------VYVK----------------------------------IGDDENG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FMIGNLS--QKFPQFSID--L-----------------YLGHEFE-IS----------------HNS---TSSVYLIGYRTFDAFDE---------LDE------------------------------------------------------------------------------------------------------------------------------------------------EIDS-----DSEL--------------------------------DEYMEQQ-IAALPQ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NEINPEE------------------------------------------------------------------------------------------DDES-DSD-------------------------------------------------------------------------EMGLDEDDDSS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DE-----------------------------------------------------------------------------------------------------------EDV-------------EAEA-----------P-LK--VAP--PSKKMPN-GA-FEIA----------------------------------------------------------------------KGGKKNKSSG-------------GKKR------CPFPC-------------------------------------------------GPSCKK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [203]
'gi|56785371|dbj|BAD82329.1| putative histone deacetylase 2 isoform b [Oryza sativa (japonica cultivar-group)]'                      -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDVD-----------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GVVIE--------------------------------------------------------------------PCNKKEIF-CPE--DTLYHL------------------------------------------------------------------------------TSVALDEAYG----LKDSNVK-----------------------------------------------------------------------------------------------------------VFVE----------------------------------V--NDEK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FAIGTLS-SKRHPHIKVD--F-----------------CFKKNFQ-LF----------------HTSL--ISKVAFCGYQVKNLGKF-----------------------------------------------------------------------------------------------------------------------------------------------------------------TDSEGDES--------------------------------DEEVPPD-------------NMIKEAQKSKLPAKSATVASAMQKA-----------------------------------------------------------------------------------------------------------------------------------------------------------------FVKEIEHYEKSKADDDNN-------------------------------------------------------------------ERYRDISVVGESTGNEDSSD-DAD---------------------------------------------------------------------------YEGKSSDEE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ETTAKEGESTD----------------------EKETPAKEGE-----------------------------------------------------------------------------------------------------------SSD-------------EEET-----------PAKN--------TKEENEPVVTPLKT----------------------------------------------------------------------FPHEMAKIEA--PITDNKTGTNTSKRGSHLQVTNPHPA-------------------------------------------------KQAKRTPIKND---------------------------------------------------TPKRSA-----------------------------SYVC----------------------NSCKKTFNSSGALKDH-----------SKAKHPATN------------------------------------------------------------------------   [320]
lcl|Smo_HDT2_2_1_unnamed_protein_product                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEAVIHGLLILLLAQQRRSHTKIPLI---------------------------------------------------------------------------------------------------------------------------------------------------F------------------------------------------GVKVL--------------------------------------------------------------------PSKSIKCP-VED--SSYLHI------------------------------------------------------------------------------SNAALGEVGSS---AKNERVI-----------------------------------------------------------------------------------------------------------LRLK----------------------------------T--QGEE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVLGTLI-PGQRDHIALD--L-----------------IISKSFQ-LS----------------HNSS--TLAVHFSGYRTEGSGEL---------QEL------------------------------------------------------------------------------------------------------------------------------------------------DREHDRGVRKENG--------------------------------NVKVPLG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSDSESDSDDDDDDDD------------------------------------------------------------------------------------DDDD-DDD-----------------------------------------------------------------------------DDEDDDE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VNAKDLALRQAMVRSLAEKKFLQMESDDDDDDDDIDEDD-----------------DDDDDDDDDD-----------------------------------------------------------------------------------------------------------DDD-------------EEID-------------EEDLRARLMGKKRAPA----ALTP----------------------------------------------------------------------PAQKKIKTPSGKTPTAPKSGKKDLPAA------------------------------------------------------------EAVAKTPKSSGKKEKDKKQRKGESCYS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [307]
lcl|Ppa_HDT2_2_1_unnamed_protein_product                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MHKQVQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLEYH---------------------------------------------------------------------LNPPLCF-THW--FIVILL------------------------------------------------------------------------------YQVALGESKVKGG-KGNDRVV-----------------------------------------------------------------------------------------------------------LKVQ----------------------------------V--DDSE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VVLGTLS-EGKCDQMQLD--L-----------------VFDREFK-VS----------------HNSS--SSSVYICGYRTEGPEEH---------GSE------------------------------------------------------------------------------------------------------------------------------------------------DEDE-----DEDE-------------------------------EDGALAVATIPVESNG--SKIIKEVTDKAATDVAKVVE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------KAMQDKSLKKQVVPDGDS-----------------------------------------------------------------------------------DEED-DEE------------------------------------------------------------------------------DSDD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [180]
'gi|89293080|gb|EAR91068.1| hypothetical protein TTHERM 00429890 [Tetrahymena thermophila SB210]'                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M------------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GCTVK--------------------------------------------------------------------KGNDHKFE-SED--HAILHL------------------------------------------------------------------------------SNVALGLNT-----KAGAQAS-----------------------------------------------------------------------------------------------------------VFAK----------------------------------V--DGKE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FVITHLT-QGKVEHTTLD--L-----------------YFRNDQE-VT----------------FGVKG-EAEVHLSGYFEPDHDEEDLYDDYPYGEEEFDDEED------------------------------------------------------------------------------------------------------------------------------------------EELEGEDDEDDDE--------------------------------EEEEEKP-KQQLQKEAAKKPAAQQQAAAATKKPAEVQKKAEPAAKAAEAKKQPSLQETLALK------------------------------------------------------------------------------------------------------------------------------------------------AAAAAKAKEALQSDEDDE-----------------------------------------------------------------------------------DDDDMDID-------------------------------------------------------------------------MEDDDEEDDDE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EDFDDEEEGN-----------------DIDDDVSDSD-----------------------------------------------------------------------------------------------------------NENGTLSQMLKRTGAEQHQD-----------LNKKAKANNNQAVNKPQNQNQKPQQQ----------------------------------------------------------------------NQNQKQNNQQQGKPQQQQQNQNKQQH-------------------------------------------------------------NNQNKQNHQQHQNKQNQHQNKQ-----------------------------------------------------------------------------------------------------HNNNQQHHNKNQHHQNKNQHNKNAHKKN--------------------------------------------------------------------------------   [370]
'gi|2499773|sp|Q26486|FKBP4 SPOFR 46 kDa FK506-binding nuclear protein (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase)'    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M------------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GLIME--------------------------------------------------------------------PNKRYTQV-VEK----PFHI------------------------------------------------------------------------------SQAAMDIST-----GDNDPCQ-----------------------------------------------------------------------------------------------------------VMVV----------------------------------V--DGKN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLVCTLQ-KGKIIQVPLD--L-----------------YFKSGDS-VS----------------FLTNG-KCNVHLTGYLDPEFEE-------------------------------------------------------------------------------------------------------------------------------------------------------------DLEDEEEAEEEEE--------------------------------EEEAPPL-VPAKNKRKLENANDATANKKAKPDKKAGKN------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAPAAESDSDDD--DEDQ-----------------------------------------------------------------------LQKFLDGEDIDTDEND-ESF------------------------------------------------------------------KMNTSAEGDDSDEEDDDE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DEEDEEDDDEDDEEEEEAPKKKKKQPAAEQDSTLDTSKES--VD-----------------------------------------------------------------------------------------------------------MSKLSKSQKRRLKKKLQQQAKQQPQVNGVDKPKKEEPQ-QKAEKKKPEAKK--EEAP----------------------------------------------------------------------VEKKEKKQIAGGVSIED--------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKVGSGPVAKAGKVVMVYYEGRLKQNNKMFDNCVKGPGFK------FRLGSKEVISGWDVGIAGMKVGGKRKIVCPPAMAYGAKGSPPVIPPNSTLVFEVDLKNVK-------------------------   [412]
'gi|68160236|gb|AAY86706.1| 45 kDa immunophilin FKBP45 [Bombyx mori]'                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M------------------------F---------------------------------------------------------------------------------------------------------------------------------------------------W------------------------------------------GLIME--------------------------------------------------------------------PNKRYTQV-VEK----PFHI------------------------------------------------------------------------------SQAAMDTST-----GDNEPCQ-----------------------------------------------------------------------------------------------------------VMVV----------------------------------V--DGKN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLVCTLQ-KNKCIQVPLD--L-----------------YFKTGDS-IA----------------FLTNG-KCNVHLTGYLDPEFEDE------------------------------------------------------------------------------------------------------------------------------------------------------------QSEDEEEVEEEEE--------------------------------ETSAP-----INNKRKLENNTNATASKKAKPDKKTAKK------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAESSDDDDDDDEEDQ-----------------------------------------------------------------------LQKLLDGEDIDTDEND-DSF------------------------------------------------------------------KMNTS--GDASDDEDEED----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDEEEGDDDDKDEESEEA------------ETTLDTSKEESKVD-----------------------------------------------------------------------------------------------------------TSKLTKSQKRRLKKKQKQQEKAQGQVNGVDKPKKEKAEPQKTEKKKAAAKKENEEGP----------------------------------------------------------------------IEKKEKKALSGGVQIED--------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKLGNGPVAKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFK------FRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNVK-------------------------   [402]
'gi|1314705|gb|AAC47134.1| Nopp44/46'                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME----------------------GF---------------------------------------------------------------------------------------------------------------------------------------------------Y------------------------------------------GVEVS--------------------------------------------------------------------AGQKVKPK-IPE--DHVLRL------------------------------------------------------------------------------TQIAVPA-------NASGAIT-----------------------------------------------------------------------------------------------------------LVIS----------------------------------F--QGKE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FTIATLDPKRSLFQMGID--L-----------------VLTAEQG-TT----------------LSATG-SGSVHLTGYVQPVDDGS---------DFD------------------------------------------------------------------------------------------------------------------------------------------------EEDDLDEVDAEDM-------------------------------------ES-YGVPPKRGGKSAKFPVSEENSD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EANGDGVDGDDESDDEEG----------------------------------------------------------------------IEKDNEGIDAGDEDDND-DDD------------------------------------------------------------------------EAYDEDDSDDDD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDDDDDDDDD-----------------------------------------------------------------------------------------------------------DDD-------------DDDE-----------PASK--------------------------------------------------------------------------------------------VQRTEQQGFRGGNRGGFRGGDRNGNGG------------------------------------------------------------NRGGFRGGDRGGNRGNFRGGDR----------------------------------------SGNGGNR---------------------------------------------------GNFRGGDRGGNRGNFRGGDRGGNRGNFRGGNRGNFRGGNSGRCRY------------------------------------------------------------------   [312]
'gi|62175218|gb|AAX69364.1| nucleolar RNA-binding protein [Trypanosoma brucei] >gi|70802943|gb|AAZ12847.1| nucleolar RNA-binding'    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME----------------------GF---------------------------------------------------------------------------------------------------------------------------------------------------Y------------------------------------------GVEVS--------------------------------------------------------------------AGQKVKPK-IPE--DHVLRL------------------------------------------------------------------------------TQIAVPA-------NASGAIT-----------------------------------------------------------------------------------------------------------LVIS----------------------------------F--QGKE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FTIATLDPKRSLFQMGID--L-----------------VLTAEQG-TT----------------LSATG-SGSVHLTGYVQPVDDGS---------DFD------------------------------------------------------------------------------------------------------------------------------------------------EEDDLDEVDAEDM-------------------------------------ES-YGVPPKRGGKSAKFPVSEENSD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EANGDGVDGDDESDDEEG----------------------------------------------------------------------IEKDNEGIDAGDEDDND-DDD------------------------------------------------------------------------EAYDEDDSDDDD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDDDDEEDDNDNDNDD----------------------DDDDDDDDDD-----------------------------------------------------------------------------------------------------------DDD-------------DDDE-----------PASK--------------------------------------------------------------------------------------------VQRTEQQGFRGGNRGGFRGGDRNGNGG------------------------------------------------------------NRGGFRGGDRGGNRGNFRGGDR----------------------------------------SGNGGNR---------------------------------------------------GNFRGGDRGGNRGNFRGGDRGGNRGNFRGGNRGNFRGGNSGRGRY------------------------------------------------------------------   [328]
;
END;


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