#NEXUS 
[MacClade 4.08 registered to M. Hasebe, NIBB]


BEGIN DATA;
	DIMENSIONS  NTAX=48 NCHAR=2106;
	FORMAT DATATYPE=PROTEIN  SYMBOLS = " 1 2 3 4"  MISSING=? GAP=- ;
MATRIX
[                                                                                                                                             10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920       930       940       950       960       970       980       990       1000      1010      1020      1030      1040      1050      1060      1070      1080      1090      1100      1110      1120      1130      1140      1150      1160      1170      1180      1190      1200      1210      1220      1230      1240      1250      1260      1270      1280      1290      1300      1310      1320      1330      1340      1350      1360      1370      1380      1390      1400      1410      1420      1430      1440      1450      1460      1470      1480      1490      1500      1510      1520      1530      1540      1550      1560      1570      1580      1590      1600      1610      1620      1630      1640      1650      1660      1670      1680      1690      1700      1710      1720      1730      1740      1750      1760      1770      1780      1790      1800      1810      1820      1830      1840      1850      1860      1870      1880      1890      1900      1910      1920      1930      1940      1950      1960      1970      1980      1990      2000      2010      2020      2030      2040      2050      2060      2070      2080      2090      2100   ]
[                                                                                                                                             .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .      ]

'gi|15239601|ref|NP 200237.1| MRE11; endonuclease/ exonuclease/ hydrolase/ manganese ion binding / protein serine/threonine phos'    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSREDFSDTLRVLVATDCHLG--YME-KD--EIRRHDSFKAFEEICSIAE-EK----------QVDFLLLGGDLFHENKPSRTTL-------------VKAIEILRRHCLNDKPVQFQVVSDQTVNFQ-----------------------------------------------------------------------------------------------------------------------------------------NAFGQVNYEDPH-----------FN----VGLPVFSIHGNH----------DDP--AG---VDNLSAIDILSACNLVNYFGKMVLGG------S-----------GVGQI---------TLYPILMKKGSTT-VALYGLGN---------------------IRDERLNRMFQTPHAVQWMRPEVQEGCDV-------SDWFNILVLHQNRVKS---N-----PKNAISEHFLPRF---------LDFIVWGHEHECLIDP---QEVSGM-----GFHITQPGSSVATS----LIDGESKPKHVLL-LEIK----------------GNQYRPTKIPL-TSVR-------------------PFEYTEIVLKDESDIDPN-----------DQNSILEH---------------LDKV------------VR-NLIEKASKK--------------------AVNRSE--------------------------------------------------------------------------------IKLPLVRIKVDYSG---------FMTINPQRFGQK-YVGK-------VAN------PQDILIFSKAS-----KKGRSE---------------------------ANIDDSERLR------PEELNQQNIEALVAES---------------------------------------------------------------------------------------------------------------------------------------NLKMEILP-VNDLD-------VALHNFVN--------KDD-------KLAFYSCVQYNLQETRGKL-AKD----SDAKKFEEDD----------LILKVGECLEERLKDRSTRPTGSSQFLSTGLTSENLTKGSSGIANAS---FSDDEDTTQMSGLAPPTR------------------------------------------------------------------------------------GRRGSSTANTTRGRAKAPTRGRGRGKASSAMK-------------------------------------QTTLDSSLGFRQSQRSASAAASAAFKSASTIGEDDVDSPSSEEVEPEDFNKPDSSSEDDESTKGKGRKRPATT-KRGRGRGSGTSKRGRKNESSSSLNRLLSSKDDDEDEDDEDREKKLNKSQPRVTRNYGALRR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [720]
'gi|50929009|ref|XP 474032.1| OSJNBa0043L09.28 [Oryza sativa (japonica cultivar-group)] >gi|38344808|emb|CAE03009.2| OSJNBa0043L'    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGDESNTLRVLVATDCHLG--YME-KD--EIRRFDSFEAFEEICSLAE-QN----------KVDFVLLGGDLFHENKPSRSTL-------------VKTIEILRRYCLNDQPVKFQVVSDQTINFP-----------------------------------------------------------------------------------------------------------------------------------------NRFGQVNYEDPN-----------FN----VGLPVFTIHGNH----------DDP--AG---VDNLSAIDILSACNLVNYFGKMDLGG------S-----------GVGEI---------AVYPVLVKKGTTF-VALYGLGN---------------------IRDERLNRMFQTPHAVQWMRPETQDGMSV-------SDWFNILVLHQNRIKT---N-----PKSAINEHFLPRF---------LDFIVWGHEHECLIDP---QEVPGM-----GFHITQPGSSVATS----LIDGEAKPKHVLL-LEIK----------------GNQYRPTKIPL-RSVR-------------------PFHYAEVVLKDEVDVDPN-----------DQASVLEH---------------LDKI------------VR-NLIKKSSQ--------------------PTASRPE--------------------------------------------------------------------------------TKLPLIRIKVDYSG---------FSTINPQRFGQK-YVGK-------VAN------PQDILIFSKSA-----KKRQTTGV-------------------------GNIDDSEKLR------PEELNQQTIEALVAEN---------------------------------------------------------------------------------------------------------------------------------------NLKMEILP-VDDLD-------IALHDFVS--------KDD-------KMAFYACLQRNLEETRTKL-NSE----ADKFKIEEED----------IIVKVGECMQERVKERSLRSKEDSRFTSSSQNLDT--GGRSVTAQSNLNSFSDDEDTREMLLGARTTNAGRKAS------------------------------------------------------------------------------GFTRPSKDATDVAKTGTSRRGRGRGTASMKQT-------------------------------------------TLNFSQSRSSAA------------IRSEEVQSSSDEENETNEANEVVESSEPEESPQQTGRKRAAPRGGRGRGRG-ATAKRGRKADISSIQSMLMSKDDDDDDEDD-----RPKKPPPRVTRNYGAVRRR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [705]
'gi|60549641|gb|AAX24126.1| putative MRE11 [Oryza sativa]'                                    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MQGDESNTLRVLVATDCHLG--YME-KD--EIRRFDSFEAFEEICPLAE-QN----------KVDFVLLGGDLFHENKPSRSTL-------------VKTIEILRRYCLNDQPVKFQVVSDQTINFP-----------------------------------------------------------------------------------------------------------------------------------------NRFGQVNYEDPN-----------FN----VGLPVFTIHGNH----------DDP--AG---VDNLSAIDILSACNLVNYFGKMDLGG------S-----------GVGEI---------AVYPVLVKKGTTF-VALYGLGN---------------------IRDERLNRMFQTPHAVQWMRPETQDGMSV-------SDWFNILVLHQNRIKT---N-----PKSAINEHFLPRF---------LDFIVWGHEHECLIDP---QEVPGM-----GFHITQPGSSVATS----LIDGEAKPKHVLL-LEIK----------------GNQYRPTKIPL-RSVR-------------------PFHYAEVVLKDEVDVDPN-----------DQASVLEH---------------LDKI------------VR-NLIKKSSQ--------------------PTASRPE--------------------------------------------------------------------------------TKLPLIRIKVDYSG---------FSTINPQRFGQK-YVGK-------VAN------PQDILIFSKSA-----KKRQTTGV-------------------------GNIDDSEKLR------PEELNQQTIEALVAEN---------------------------------------------------------------------------------------------------------------------------------------NLKMEILP-VDDLD-------IALHDFVS--------KDD-------KMAFYACLQRNLEETRTKL-NSE----ADKFKIEEED----------IIVKVGECMQERVKERSLRSKEDSRFTSSSQNLDT--GGRSVTAQSNLNSFSDDEDTREMLLGARTTNAGRKAS------------------------------------------------------------------------------GFTRPSKDATDVAKTGTSRRGRGRGTASMKQT-------------------------------------------TLNFSQSRSSAA------------IRSEEVQSSSDEENETNEANEVVESSEPEESPQQTGRKRAAPRGGRGRGRG-ATAKRGRKADISSIQSMLMSKDDDDDDEDD-----RPKKPPPRVTRNYGAVRRT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [706]
'gi|70907740|emb|CAJ15648.1| meiotic recombination 11 [Triticum monococcum]'                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEDDRDTLRILVATDCHLG--YME-KD--EIRRFDSFEAFEEICSLAK-QK----------EVDFVLLGGDLFHENKPSRSTL-------------VKTIEILRRYCLNDLPVKFQVVSDQTVNFP-----------------------------------------------------------------------------------------------------------------------------------------NRFGHVNYEDPH-----------FN----VGLPVFTIHGNH----------DDP--AG---VDNLSAIDILSACNLVNYFGKMDLGG------S-----------GVGQI---------AVHPVLVKKGTTT-VALYGLGN---------------------IRDERLNRMFQTPHSVQWMRPESQEGLSV-------SDWFNILVLHQNRIKT---N-----PKSAINEHFLPRF---------LDFVVWGHEHECLIDP---QEVPGM-----GFHITQPGSSVATS----LIDGEAKPKHVLL-LEIK----------------GNQYRPNKIPL-MTVR-------------------PFEYAEVVLKDESDVDPN-----------DQASVLEH---------------LDKI------------VR-NLIEKSSQ--------------------PTASRSE--------------------------------------------------------------------------------AKLPLVRIKVDYSG---------FSTINPQRFGQK-YVGK-------VAN------PQDILIFSKAA-----KKRQTTTG-------------------------ENIDESEKLR------PEELNQQTIEALVAEN---------------------------------------------------------------------------------------------------------------------------------------NLKMEILP-VDDLD-------IALHDFVS--------KDD-------KTAFYACLQRNLDETRKKL-NSE----AEKFKIEEED----------IIVKVGECMQERVKEISLRSKGDSGLVSSTPNLDT-IRGKSVAAESSMNTFSDDEDTRELLLGTRST---RSTA------------------------------------------------------------------------------GFTRPSKDATGAARGGASKRGRGKG--SLKQT-------------------------------------------TLSFSQSRSSAA------------IRSEEVDSSSD-EDAANEVNEVVENSDPEDSFPQSGRKRPAPR-GRGRARGTTTAKRGRKADTGSMPSMVMSK-DDDSDEDD-----KPKKPPPRVTRNYGAVKRR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [699]
'gi|70907752|emb|CAJ15654.1| meiotic recombination 11 [Triticum monococcum]'                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEDDRDTLRILVATDCHLG--YME-KD--EIRRFDSFEAFEEICSLAK-QK----------EVDFVLLGGDLFHENKPSRSTL-------------VKTIEILRRYCLNDLPVKFQVVSDQTVNFP-----------------------------------------------------------------------------------------------------------------------------------------NRFGHVNYEDPH-----------FN----VGLPVFTIHGNH----------DDP--AG---VDNLSAIDILSACNLVNYFGKMDLGG------S-----------GVGQI---------AVHPVLVKKGTTT-VALYGLGN---------------------IRDERLNRMFQTPHSVQWMRPESQEGLSV-------SDWFNILVLHQNRIKT---N-----PKSAINEHFLPRF---------LDFVVWGHEHECLIDP---QEVPGM-----GFHITQPGSSVATS----LIDGEAKPKHVLL-LEIK----------------GNQYRPNKIPL-MTVR-------------------PFEYAEVVLKDESDVDPN-----------DQASVLEH---------------LDKI------------VR-NLIEKSSQ--------------------PTASRSE--------------------------------------------------------------------------------AKLPLVRIKVDYSG---------FSTINPQRFGQK-YVGK-------VAN------PQDILIFSKAA-----KKRQTTTG-------------------------ENIDESEKLR------PEELNQQTIEALVAEN---------------------------------------------------------------------------------------------------------------------------------------NLKMEILP-VDDLD-------IALHDFVS--------KDD-------KTAFYACLQRNLDETRKKL-NSE----AEKFKIEEED----------IIVKVGECMQERVKEISLRSKGDPGLVSSTPNLDT-IRGKSVAAESSMNTFSDDEDTRELLLGTRST---RSTA------------------------------------------------------------------------------GFTRPSKDATGAARGGASKRGRGKG--SLKQT-------------------------------------------TLSFSQSRSSAA------------IRSEEVDSSSD-EDAANEVNEVVENSDPEDSFPQSGRKRPAPR-GRGRARGTTTAKRGRKADTGSMPSMVMSK-DDDSDEDD-----KPKKPPPRVTRNYGAVKRR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [699]
'gi|70907742|emb|CAJ15649.1| meiotic recombination 11 [Aegilops tauschii]'                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEDDKDTLRILVATDCHLG--YME-KD--EIRRFDSFEAFEEICSLAK-QK----------EVDFVLLGGDLFHENKPSRSTL-------------VKTIEILRRYCLNDLPVKFQVVSDQTVNFP-----------------------------------------------------------------------------------------------------------------------------------------NRFGHVNYEDPH-----------FN----VGLPVFTIHGNH----------DDP--AG---VDNLSAIDILSACNLVNYFGKMDLGG------S-----------GVGQI---------AVHPVLVKKGTTT-VALYGLGN---------------------IRDERLNRMFQTPHSVQWMRPESQEGLSV-------SDWFNILVLHQNRIKT---N-----PKSAINEHFLPRF---------LDFVVWGHEHECLIDP---QEVPGM-----GFHITQPGSSVATS----LIDGEAKPKHVLL-LEIK----------------GNQYRPNKIPL-MTVR-------------------PFEYAEVVLKDEADVDPN-----------DQASVLEH---------------LDKI------------VR-NLIEKSSQ--------------------PTASRSE--------------------------------------------------------------------------------AKLPLVRIKVDYSG---------FSTINPQRFGQK-YVGK-------VAN------PQDILIFSKAA-----KKRQTTTG-------------------------ENIDESEKLR------PEELNQQTIEALVAEN---------------------------------------------------------------------------------------------------------------------------------------NLKMEILP-VDDLD-------IALHDFVS--------KDD-------KTAFYACLQRNLDETRKKL-NSE----AEKFKIEEED----------IIVKVGECMQERVKEISLRSKGDTGLASSTQNLDT-TRGKSVAAESSLNTFSDDEDTRELLLGTRST---RSTA------------------------------------------------------------------------------GFTRPSKDATGAPRGGASKRGRGKG--SLKQT-------------------------------------------TLSFSQSRSSAA------------IRSEEVDSSSD-EDAANEANEVVENSDPEDSFPQSGRKRPAPR-GRGRARGTSTAKRGRKADTGSMPSMVMSK-DDDSDEDD-----KPKKPPPRVTRNYGAVKRR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [699]
'gi|70907744|emb|CAJ15650.1| meiotic recombination 11 [Triticum turgidum]'                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEDDRDTLRILVATDCHLG--YME-KD--EIRRFDSFEAFEEICSLAK-QK----------EVDFVLLGGDLFHENKPSRSTL-------------VKTIEILRRYCLNDLPVKFQVVSDQTVNFP-----------------------------------------------------------------------------------------------------------------------------------------NRFGHVNYEDPH-----------FN----VGLPVFTIHGNH----------DDP--AG---VDNLSAIDILSACNLVNYFGKMDLGG------S-----------GVGQI---------AVHPVLVKKGTTT-VALYGLGN---------------------IRDERLNRMFQTPHSVQWMRPESQEGLSV-------SDWFNILVLHQNRIKT---N-----PKSAINEHFLPRF---------LDFVVWGHEHECLIDP---QEVPGM-----GFHITQPGSSVATS----LIDGEAKPKHVLL-LEIK----------------GNQYRPNKIPL-MTVR-------------------PFEYAEVVLKDEADVDPN-----------DQASVLEH---------------LDKI------------VR-NLIEKSSQ--------------------PTASRSE--------------------------------------------------------------------------------AKLPLVRIKVDYSG---------FSTINPQRFGQK-YVGK-------VAN------PQDILIFSKAA-----KKRQTTTG-------------------------ENIDESEKLR------PEELNQQTIEALVAEN---------------------------------------------------------------------------------------------------------------------------------------NLKMEILP-VDDLD-------IALHDFVS--------KDD-------KTAFYACLQRNLDETRKKL-NSE----AEKLKIEEED----------IIVKVGECMQERVKEISLRSKGDTGLASSTQNLDT-IRGKSVAAESSMNTFSDDEDTRELLLGTRST---RSTA------------------------------------------------------------------------------GFTRPSKDATGAARGGASKRGRGKG--SLKQT-------------------------------------------TLSFSQSRSSAA------------IRSEEVDSSSD-EDAANEVNEVVENSDPEDSFPQSGRKRPAPR-GRGRARGTTTAKRGRKADTGSMPSMVMSK-DDDSDEDD-----KPKKPPPRVTRNYGAVKRR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [699]
'gi|70907754|emb|CAJ15655.1| meiotic recombination 11 [Aegilops tauschii]'                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEDDKDTLRILVATDCHLG--YME-KD--EIRRFDSFEAFEEICSLAK-QK----------EVDFVLLGGDLFHENKPSRSTL-------------VKTIEILRRYCLNDLPVKFQVVSDQTVNFP-----------------------------------------------------------------------------------------------------------------------------------------NRFGHVNYEDPH-----------FN----VGLPVFTIHGNH----------DDP--AG---VDNLSAIDILSACNLVNYFGKMDLGG------S-----------GVGQI---------AVHPVLVKKGTTT-VALYGLGN---------------------IRDERLNRMFQTPHSVQWMRPESQEGLSV-------SDWFNILVLHQNRIKT---N-----PKSAINEHFLPRF---------LDFVVWGHEHECLIDP---QEVPGM-----GFHITQPGSSVATS----LIDGEAKPKHVLL-LEIK----------------GNQYRPNKIPL-MTVR-------------------PFEYAEVVLKDEADVDPN-----------DQASVLEH---------------LDKI------------VR-NLIEKSSQ--------------------PTASRSE--------------------------------------------------------------------------------AKLPLVRIKVDYSG---------FSTINPQRFGQK-YVGK-------VAN------PQDILIFSKAA-----KKRQTTTG-------------------------ENIDESEKLR------PEELNQQTIEALVAEN---------------------------------------------------------------------------------------------------------------------------------------NLKMEILP-VDDLD-------IALHDFVS--------KDD-------KTAFYACLQRNLDETRKKL-NSE----AEKFKIEEED----------IIVKVGECMQERVKEISLCSKGDTGLASSTQNLDT-TRGKSVAAESSLNTFSDDEDTRELLLGTRST---RSTA------------------------------------------------------------------------------GFTRPSKDATGAARGGASKRGRGKG--SLKQT-------------------------------------------TLSFSQSRSSAA------------IRSEEVDSSSD-EDAANEANEVVENSDPEDSFPQSGRKRPAPR-GRGRARGTSTAKRGRKADTGSMPSMVMSK-DDDSDEDD-----KPKKPPPRVTRNYGAVKRR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [699]
'gi|70907748|emb|CAJ15652.1| meiotic recombination 11 [Triticum turgidum] >gi|70907746|emb|CAJ15651.1| meiotic recombination 11'     ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEDDRDMLRILVATDCHLG--YME-KD--EIRRFDSFEAFEEICSLAK-QK----------EVDFVLLGGDLFHENKPSRSTL-------------VKTIEILRRYCLNDLPVKFQVVSDQTVNFP-----------------------------------------------------------------------------------------------------------------------------------------NRFGHVNYEDPH-----------FN----VGLPVFTIHGNH----------DDP--AG---VDNLSAIDILSACNLVNYFGKMDLGG------S-----------GVGQI---------AVHPVLVKKGTTT-VALYGLGN---------------------IRDERLNRMFQTPHSVQWMRPESQEGLSV-------SDWFNILVLHQNRIKT---N-----PKSAINEHFLPRF---------LDFVVWGHEHECLIDP---QEVPGM-----GFHITQPGSSVATS----LIDGEAKPKHVLL-LEIK----------------GNQYRPNKIPL-MTVR-------------------PFEYAEVVLKDEADVDPN-----------DQASVLEH---------------LDKI------------VR-NLIEKSSQ--------------------PAASRSE--------------------------------------------------------------------------------AKLPLVRIKVDYSG---------FSTINPQRFGQK-YVGK-------VAN------PQDILIFSKAA-----KKRQTTTG-------------------------ENIDESEKLR------PEELNQQTIEALVAEN---------------------------------------------------------------------------------------------------------------------------------------NLKMEILP-VDDLD-------IALHDFVS--------KDD-------KTAFYACLQRNLDETRKKL-NSE----AEKFKIEEED----------IIVKVGECMQERVKEISLRSKGDTGLASSTQNLDT-IRGKSVAAESSLNTFSDDEDTRELLLGTRST---RSTA------------------------------------------------------------------------------GFTRPSKDATGAARGGASKRGSGKG--SLKQT-------------------------------------------TLTFSQSRSSAA------------IRSEEVDSSSD-EDAANEVNEVVENSDPEDSFPQSGRKRPAPR-GRGRARGTTTAKRGRKADTGSMPSMVMSK-DDDSDEDD-----KPKKPPPRVTRNYGAVKRR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [699]
lcl|Ppa_MRE11_1_1_unnamed_protein_product                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------?AADTNTLRILVATDCHVG--YLE-ND--EIRRFDSFNAFEEICSIAS-QR----------QVDFVLLGGDLFHENKPSRSTL-------------VRTIEILRKYCMNDKPIQFQVVSDQTINFP-----------------------------------------------------------------------------------------------------------------------------------------NKFGVVNYEDPN-----------FN----VGLPVFTIHGNH----------DDP--AG---VDNLSAIDILAACNLVNYFGKVALGG------N-----------GVGNI---------ALHPILLRKGSTN-VALYGLGN---------------------IRDERLNRMFQTPHAVQWIRPESTDDCPF-------SDWFNIFVLHQNRVKA---N-----PKNAINEHMLAKF---------LDFVVWGHEHECLVDP---QEVLGM-----DFHITQPGSSVATS----LIDGESKPKHVLL-LEIK----------------GNEYRPTKVPL-KSVR-------------------PFKYKNVSLQDAADLDAN-----------DVQSVMDH---------------LSQM------------VH-DLIAEAAEE----------------------GHPD--------------------------------------------------------------------------------PMLPLVRLRVDYTG---------FTTINPQRFGQK-FVGK-------VAN------PHDILLFTKAV-----KRRPTADGL-IPFFSWSQCAVKSYRNSYDLMYSGKIEDEEKLR------PEELNQQNIEALLAES---------------------------------------------------------------------------------------------------------------------------------------NLKMEILP-VSELG-------LALHKFVS--------KDD-------KLAFIECVQENLDDTQNKL-AEE----ALADKLQEDD----------VIVKVSEHMQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [521]
lcl|Smo_MRE11_2_1_unnamed_protein_product                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TYNCL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLRFGHVNYEDAH-----------YN----VGLPVFTIHGNH----------DDP--AG---VDNISAIDILASSNLVNYFGKVDLGG------S-----------GVGKI---------ALHPILLRKGSTK-IALYGLGN---------------------IRDERLNRIFQTPEGVQWKRPADHADCPS-------SEWFNMFVLHQNRVKT---N-----PKNAINEHFLARF---------LDFVVWGHEHECIVDP---QEVPGM-----GFHVTQPGSSVATA----LTDGEAQPKHVLQ-LEIKVLKIYLSVFRILISLQGNKYRPTKVPL-KTVR-------------------PFEFTDVVLKDIEGIDPS-----------DQTSVLSH---------------LGE-------------VQ-DLITTAVAKSQSQE-----------------------------------------------------------------------------------------------------SMLPLIRVRVDYTD---------CTTINPQKFGQK-FVGKIKRTELQVAN------PHDILIFTKSS-----KKKQRLDAS--------------------------GSEKELLA------PEELNQQNIEALVAES---------------------------------------------------------------------------------------------------------------------------------------NLKMEILP-VSVLG-------LALHDFVN--------KDD-------KQAFQSCVEHTLQETQKKL-LED----EEVELMDESE----------IVEKVTEHMQDPRNQAPSVSLADAVRPWSQVTQSKGSTSGQRRTVDIDDDDD----------------------------------------------------------------------------------------------------FGISGTTVVTKASKAKATKATATRKSRASAAAVGDDDDDEDDAPTGRGRGRGRGRGRGRGKQNMKQTTLDTAIGARPRRFYDGFPYRSSSRAAATAATAADSDEEDVAASSAND-----EPEDPESDAEPTPTKGRKRAASTSRGRGRGQSTPKRGRTQSSKSRSVDDEDNDEVENEHDSDGDVQLTTSTRGSQLVSRQVLIICLRCTWSPFCLVIVLVYIFFFAFILLVVVSVREREIIFVLALVVLIIRVLRVHNDADLVIPRLELEQARAKRSAGALQQAEPQRRQ?-------------------------------------------------------------------------------------------------------   [755]
lcl|Smo_MRE11_1_1_unnamed_protein_product                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------?SGELARESCSRSRPRSSQPSLNLRLNAHSRKYFDARVENLHHRRCEDFHGARPFPFAGTVNELPESRILDDAIERLPILVAVDRPRKKCSSYRALFRPIAWIGQPLSGRVDYQASRWICHIGGEDLDPDTFRILIATDCHLG--YLE-KD--EIRRQDSFRTFDEICRIAF-ERQQVELIWSGGQVDFMLLGGDLFHENRPSSTTL-------------VKTIDILRRYCLNDLPVQFQVVSDQTINFP-----------------------------------------------------------------------------------------------------------------------------------------NKFGHVNYEDAH-----------YN----VGLPVFTIHGNH----------DDP--AG---VDNISAIDILASSNLVNYFGKVDLGG------S-----------GVGKI---------ALHPILLRKGSTK-IALYGLGN---------------------IRDERLNRIFQTPEGVQWKRPADHADCPS-------SEWFNMFVLHQN?------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [357]
lcl|3400_Cre_unnamed_protein_product                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRILISTDNHLG--VWE-KD--ETRREDSFRAFEEVLQLAV-AK----------RADLVLLGGDLFHENKPSRGTL-------------VRTIQLLSKYCLNDRPVRFRILSDQAVNFR---------------------------------------------------------------------------------------------------------------------------------------GLRDFRRVNFENPN-----------LN----VGLPVFTIHGNH----------DDP--SG---QDSLSAVDILSQAGLVNYFGKH-VSA------P-----------GAARV---------TLSPILIEK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [163]
'gi|50941649|ref|XP 480352.1| putative DNA repair and meiosis protein Mre11 [Oryza sativa (japonica cultivar-group)] >gi|3863680'    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MHASFASWDEEENSMLRILVATDCHLG--YLE-KD--EIRRFDSFDTFEEICSLAV-IN----------KVDFILLGGNLFHENKPSISTL-------------VKSMEIIRSYCLNDHQVQFQVVSDQAACLQ-----------------------------------------------------------------------------------------------------------------------------------------NRFGRVNFEDPN-----------FN----IGLPVFTVHGTH----------DGP--AG---VDGLSATDILSACNFVNYFGKVDPGS------S-----------DVDQI---------SVCPVFIKKGATS-VALYGLGN---------------------IRDEKLSRMLQTHYKIQWMKADSE------------DDWFNLFVFHQKRRKG---S-----STNGINEQLLPSF---------LDLVIWGHEHECLIDH---QEVSGK-----DFHIIHPGSSVATS----LSNAEAKPKNVVL-LEIK----------------GMQYKQTNIPL-KSVR-------------------PFQYAEVQLKDQLGVELN-----------NEAALYEH---------------LDNIFSAVLLNTELFQVS-NLIDK-----------------------TAISGSE--------------------------------------------------------------------------------PKLPLVRVKVDYSG---------FSTITPQRFGQK-YVGK-------VAN------PNDIILFSRSA-----QQNRTREHT---------------------------GSSEECE------PNELDQQSIEELIAES---------------------------------------------------------------------------------------------------------------------------------------NLNMQILD-KNDLD-------SALHDFVN--------KDE-------NMAFHSCLDKNIDAAKKKL------TFATKDLKAEED----------IVLQLDQCMQERMNEDPLLSKGGSEIMPCSQSLPTNA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSAFQELKCSSNEEQDTHESDELIEISDKEHSQQASQKRPAPVDGGSQSSRRKTDLSSFYRTAPSKNNDDGGKKGKAPVI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [615]
'gi|66800143|ref|XP 628997.1| hypothetical protein DDB0191996 [Dictyostelium discoideum] >gi|60462364|gb|EAL60585.1| hypothetica'    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEEEEIIEPKDFENEESENIQMDENEKQIPIQTTNDPQNKNIMRILVATDNHLG--YLE-RD--PIRGDDSFNSFEEILKYAH-TL----------KVDMVLLGGDLFHDNKPSRSCL-------------YRTMELFRKYCLGDSPVRIQFLSDQSVNFS-----------------------------------------------------------------------------------------------------------------------------------------NQFHTVNYEDPN-----------FN----ISLPIFSIHGNH----------DDP--TG---EGGLAALDLLSVSNLVNYFGKT----------E-----------DIDDI---------TVYPLLLGKGETK-IAIYGLGN---------------------IRDERLHRTFQK-QSVKLMRPVESK-----------DEWFNILVLHQNRVAH---N-----PKNYVHEKMIESF---------IDFVLWGHEHECLVNP---QASSVG-----EFHISQPGSSVATA----LSEGESKDKFVGL-LEVY----------------KNQFRFKPFPL-NTVR-------------------PFIMDQIILANSNIHPT------------QQNDVIQW---------------IEQK------------VE-SMIEQAKLK-------------------SQGKPNE--------------------------------------------------------------------------------SMLPLIRLKVDYTG---------YSTINPQKFGQR-FQGR-------VAN------PNDVLLFHRKK-----PTTLSSKKQ---------------------KDGGELDVNSIK-------EKEEDKVKVADFISEFLGNTP----------------------------------------------------------------------------------------------------------------------------------NDRLQILS-ENDLF-------NSLHSFVE--------KDE-------TDSILKMVDLSLKSTQKYL-NSKISSKDAYPDFIAKY----------IDDNFPLPHQNVSSVNSDLLPINNPNEFESNLLDEDSHGHEHGHSHNHSQMIDNDDDENILNQRTIFKSPQSNKTAPTTT------------------------------------------------------------------------TTTTTTTSSQISTRRKSSTQSSTQSSQTSIII-----------------------------------------------------------------------DDDDDDDEINEDNDDNDKDFESDEEKTPPSKKRGKVKQVGSVSKRSRSKK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [689]
'gi|72175348|ref|XP 798167.1| PREDICTED: similar to Double-strand break repair protein MRE11A (MRE11 homolog 1) (MRE11 meiotic r'    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDDVDENTIKILVATDCHVG--YME-KD--SIRHSDSINTFEEILQLAR-KN----------KVDMVLLGGDLFHENKPSRKSL-------------HGVMTLLRKYCMGDRPVQIEFLSDQSVNFA----------------------------------------------------------------------------------------------------------------------------------------ASPFPSVNYEDAN-----------LN----IDMPVFSIHGNH----------DDP--AG---LGNLCALDMLSVSGLVNYFGKS----------T-----------SLESV---------EISPILIQKGTTK-LATFGLGS---------------------IRDERLHRMFLS-GKISMLRPKQNA-----------DSWFNIFVIHQNRAKH---G-----EHNYIPEQFLDNF---------IDLVIWGHEHECLIDP---VWNATQ-----NFFISQPGSSIATS----LSPGEAEPKHVGL-LQVR----------------GKAMKCTKLKL-ETVR-------------------PFYIEDIALQDTTLNPDDVK---------LAEKTSAF---------------CTEK------------VE-ALIQRAEDE-------------------HTGNRKQ--------------------------------------------------------------------------------PTLPLIRLRVDYSGG--------FDTINVNRFGQK-FVGR-------VAN------TKDLVRFTKRR-----IQLKKE------------------------------DLGEFLK------PEALETERVEDLVRKYFSETEE---------------------------------------------------------------------------------------------------------------------------------TKQLELLS-EKGLG-------QAVREYVD--------KEE-------KEAIQALVKHQLSQTQGQL-KNR--------KTTEEH----------IDDELHRFKVERREMTEADVTQEVKV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [509]
'gi|4884904|gb|AAD31866.1| putative nuclease Mre11 [Xenopus laevis] >gi|18203566|sp|Q9W6K1|MRE11 XENLA Double-strand break repai'    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSSSSSSLDDEDTFKILVATDIHLG--FME-KD--AVRGNDSFVAFDEILRLAQ-DN----------EVDFLLLGGDLFHDNKPSRRTL-------------HICLEQLRKYCMGDRPIEFEVLSDQSVNFG----------------------------------------------------------------------------------------------------------------------------------------YSKFPWVNYQDNN-----------LN----ISLPVFSVHGNH----------DDP--TG---ADALCALDILSSAGLVNHFGRA----------T-----------SVEKI---------DISPVLLQKGHSK-IALYGLGS---------------------IPDERLYRMFVN-KQVMMLRPREDE-----------SSWFNLFVIHQNRSKH---G-----PTNYIPEQFLDEF---------LDLVIWGHEHECKIAP---TRNEQQ-----LFYVSQPGSSVATS----LSPGEAEKKHVGL-LRIK----------------GKKMNMQKIPL-QTVR-------------------QFFIEDLVLSDYPDIFNPDNPR-------VTQEIETF---------------CIEK------------VE-AMLDTAERE-------------------RLGNPRQ--------------------------------------------------------------------------------PDKPLIRLRVDYTGG--------FEPFNTLRFSQK-FVDR-------TAN------PKDIIHFFRHK-----EQKDKKDSI-------------------------TINFGKIDSKP----LLEGTTLRVEDLVKEYFKTAEK---------------------------------------------------------------------------------------------------------------------------------NVQLSLLT-ERGMG-------EAVQEFVD--------KEE-------KDALEELVKFQLEKTQRFL-KER------HIDAEEEK----------IDEEVRKFRETRKTNTNEEDEEVREAIQRARTHRSQA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PDVEMSDEDDDAL---LRKVSLSDDEDVRASMPARGRGRGRA-RGGRGQSTTTRG-----TSRRGRGSASADQPSSGRATKA---TGKNMSILDAFKPSSRQPTARNV--------------------------------------AKKTYSEDIEDDDSDLEEVSFTPSSVIESRRTSSTSTSYSRKSTQPQSQATKAHFFDDDDDEEDFDPFKKSGPSRRGRR---------------------------------------------------------------------   [711]
'gi|40781670|gb|AAH65144.1| Meiotic recombination 11 homolog A [Mus musculus] >gi|74189937|dbj|BAE24593.1| unnamed protein produ'    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M-SPTDPLDDEDTFKILVATDIHLG--FME-KD--AVRGNDTFVTFDEILRLAL-EN----------EVDFILLGGDLFHENKPSRKTL-------------HSCLELLRKYCMGDRPVQFEVISDQSVNFG----------------------------------------------------------------------------------------------------------------------------------------FSKFPWVNYQDGN-----------LN----ISIPVFSIHGNH----------DDP--TG---ADALCALDVLSCAGFVNHFGRS----------M-----------SVEKV---------DISPVLLQKGSTK-LALYGLGS---------------------IPDERLYRMFVN-KKVTMLRPKEDE-----------NSWFNLFVIHQNRSKH---G-----NTNFIPEQFLDDF---------IDLVIWGHEHECKIGP---IKNEQQ-----LFYVSQPGSSVVTS----LSPGEAVKKHVGL-LRIK----------------GRKMNMQKLPL-RTVR-------------------RFFIEDVVLANHPNLFNPDNPK-------VTQAIQSF---------------CLEK------------IE-EMLDSAERE-------------------RLGNPQQ--------------------------------------------------------------------------------PGKPLIRLRVDYSGG--------FEPFNVLRFSQK-FVDR-------VAN------PKDVIHFFRHR-----EQKGKTGE--------------------------EINFGMLITKP----ASEGATLRVEDLVKQYFQTAEK---------------------------------------------------------------------------------------------------------------------------------NVQLSLLT-ERGMG-------EAVQEFVD--------KEE-------KDAIEELVKYQLEKTQRFL-KER------HIDALEDK----------IDEEVRRFRESRQRNTNEEDDEVREAMSRARALRSQS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ETSTSAFSAEDL-SFDTSEQTANDSDDSLSAVPSRGRGRGRGRRGARGQSSAPRG-----GSQRGR-DTGLEITTRGRSSKATSSTSRNMSIIDAFR-STRQQPSRNV--------------------------------------APKNYSETIEVDDSD-EDDIF-PTNSRADQRWSG---T-TSSKRMSQSQTAKGVDFESDEDDDD-DPFMSSSCPRRNRR---------------------------------------------------------------------   [706]
'gi|31418857|gb|AAH53202.1| Meiotic recombination 11 homolog A [Danio rerio] >gi|47777304|ref|NP 001001407.1| meiotic recombinat'    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MASAGSTVDDEDTFKILIATDIHLG--YLE-KD--AIRGNDTFVTFDEIMKQAM-QN----------EVDFVLLGGDLFHDNKPSRKTM-------------HSCMEVMRKYCMGDRPIVFEIISDQAVNFS----------------------------------------------------------------------------------------------------------------------------------------HSKFPWVNYLDDN-----------LN----ISIPIFSVHGNH----------DDP--TG---SDGLCAVDLLSCAGLVNHFGRS----------R-----------SVEKV---------EISPVLLQKGDTR-IALYGLGS---------------------IPDERLYRMFVN-NQVTMLRPREDE-----------DGWFNMFVIHQNRSKH---G-----ATNYIPEQFLDDF---------LDLVVWGHEHECKIAP---VRNEQQ-----LFYVTQPGSSVITS----LSPGEAVKKHIGL-LRVK----------------GKKMNLQKIPL-QTVR-------------------QFFIQDVVLSDYPELFSPEQPN-------TMLKVQAF---------------CQEK------------VE-EMLEEAERE-------------------RLGNPQI--------------------------------------------------------------------------------PEKPLIRLRVDYSGG--------FEVFNTMRFSQK-FVDK-------VAN------PKDILHFVRHR-----ETKGNIKDE-------------------------DVDFEALFSRP----TSEVLQLRVEDLVKEYFQTAEK---------------------------------------------------------------------------------------------------------------------------------NVQLSLLT-EQGMG-------KAVQEFVD--------KEE-------RDAIEELINYQLEKTQRYL-RER------RVDATEEK----------IDEEIRQFRDSK-RNTAEEDEEVQEAIIRAKAHRDRG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ETARD----DDLGLSDDPADIAMESDEEPSSAPPV-RGRGRGSRGGRDPSASKRGRARGAASRSGRGGRGRGSLSS---------PVKTKSIMDGCLH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [619]
'gi|13324574|gb|AAK18790.1| meiotic recombination 11 [Homo sapiens] >gi|45934428|gb|AAS79320.1| MRE11 meiotic recombination 11 h'    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M-STADALDDENTFKILVATDIHLG--FME-KD--AVRGNDTFVTLDEILRLAQ-EN----------EVDFILLGGDLFHENKPSRKTL-------------HTCLELLRKYCMGDRPVQFEILSDQSVNFG----------------------------------------------------------------------------------------------------------------------------------------FSKFPWVNYQDGN-----------LN----ISIPVFSIHGNH----------DDP--TG---ADALCALDILSCAGFVNHFGRS----------M-----------SVEKI---------DISPVLLQKGSTK-IALYGLGS---------------------IPDERLYRMFVN-KKVTMLRPKEDE-----------NSWFNLFVIHQNRSKH---G-----STNFIPEQFLDDF---------IDLVIWGHEHECKIAP---TKNEQQ-----LFYISQPGSSVVTS----LSPGEAVKKHVGL-LRIK----------------GRKMNMHKIPL-HTVR-------------------QFFMEDIVLANHPDIFNPDNPK-------VTQAIQSF---------------CLEK------------IE-EMLENAERE-------------------RLGNSHQ--------------------------------------------------------------------------------PEKPLVRLRVDYSGG--------FEPFSVLRFSQK-FVDR-------VAN------PKDIIHFFRHR-----EQKEKTGE--------------------------EINFGKLITKP-----SEGTTLRVEDLVKQYFQTAEK---------------------------------------------------------------------------------------------------------------------------------NVQLSLLT-ERGMG-------EAVQEFVD--------KEE-------KDAIEELVKYQLEKTQRFL-KER------HIDALEDK----------IDEEVRRFRETRQKNTNEEDDEVREAMTRARALRSQS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EESASAFSADDLMSIDLAEQMANDSDDSISAATNKGRGRGRGRRGGRGQNSASRG-----GSQRGRADTGLETSTRSRNSKTAVSASRNMSIIDAFK-STRQQPSRNV--------------------------------------TTKNYSEVIEVDESDVEEDIF-PTTSKTDQRWSS---T-SSSKIMSQSQVSKGVDFESSEDDDD-DPFMNTSSLRRNRR---------------------------------------------------------------------   [708]
'gi|11560107|ref|NP 071615.1| MRE11 [Rattus norvegicus] >gi|9651646|gb|AAF91227.1| MRE11 [Rattus norvegicus] >gi|18203120|sp|Q9J'    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M-SPTDPLDDEDTFKILVATDIHLG--FME-KD--AVRGNDTFVTFDEILRLAL-EN----------EVDFILLGGDLFHENKPSRKTL-------------HSCLELLRKYCMGDRPVQFEIISDQSVNFG----------------------------------------------------------------------------------------------------------------------------------------FSKFPWVNYRDGN-----------LN----ISIPVFSIHGNH----------DDP--TG---ADALCALDVLSCAGFVNHFGRS----------M-----------SVEKV---------DISPVLLQKGSTK-LALYGLGS---------------------IPDERLYRMFVN-KKVTMLRPKEDE-----------NSWFNLFVIHQNRSKH---G-----STNFIPEQFLDDF---------IDLVIWGHEHECKIGP---TRNEQQ-----LFYVSQPGSSVVTA----LSPGETVKKHVGL-LRVK----------------GRKMNMQKLPL-RTVR-------------------QFFMEDVVLANHPSLFNPDNPK-------VTQAIQSF---------------CLEK------------IE-EMLDSAERE-------------------RLGNPQQ--------------------------------------------------------------------------------PEKPLIRLRVDYSGG--------FEPFNVLRFSQK-FVDR-------VAN------PKDVIHFFRHR-----EQKGKTGE--------------------------EINFGKLIIKP----ASEGTTLRVEDLVKQYFQTAEK---------------------------------------------------------------------------------------------------------------------------------NVQLSLLT-ERGMG-------EAVQEFVD--------KEE-------KDAIEELVKYQLEKTQRFL-KER------HIDALEDK----------IDEEVRRFRESRQRNTNEEDDEVREAMSRARALRSQS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ENAASAFSADDL-SFDITEQTADDSDDSQSAVPSRGRGRGRGRRGGRGQSTAPRG-----GSQRGR-DTGLGISTRGRSSKATASTSRNMSIIDAFR-STRQQPSRNV--------------------------------------ATKNYSETIEVDESD-DDDSF-PTSSRADQRWSG---T-APSKRMSQSQTAKGVDFESDEDDDD-DPFMSGSCPRRNRR---------------------------------------------------------------------   [706]
'gi|24234690|ref|NP 005581.2| meiotic recombination 11 homolog A isoform 2 [Homo sapiens]'                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M-STADALDDENTFKILVATDIHLG--FME-KD--AVRGNDTFVTLDEILRLAQ-EN----------EVDFILLGGDLFHENKPSRKTL-------------HTCLELLRKYCMGDRPVQFEILSDQSVNFG----------------------------------------------------------------------------------------------------------------------------------------FSKFPWVNYQDGN-----------LN----ISIPVFSIHGNH----------DDP--TG---ADALCALDILSCAGFVNHFGRS----------M-----------SVEKI---------DISPVLLQKGSTK-IALYGLGS---------------------IPDERLYRMFVN-KKVTMLRPKEDE-----------NSWFNLFVIHQNRSKH---G-----STNFIPEQFLDDF---------IDLVIWGHEHECKIAP---TKNEQQ-----LFYISQPGSSVVTS----LSPGEAVKKHVGL-LRIK----------------GRKMNMHKIPL-HTVR-------------------QFFMEDIVLANHPDIFNPDNPK-------VTQAIQSF---------------CLEK------------IE-EMLENAERE-------------------RLGNSHQ--------------------------------------------------------------------------------PEKPLVRLRVDYSGG--------FEPFSVLRFSQK-FVDR-------VAN------PKDIIHFFRHR-----EQKEKTGE--------------------------EINFGKLITKP-----SEGTTLRVEDLVKQYFQTAEK---------------------------------------------------------------------------------------------------------------------------------NVQLSLLT-ERGMG-------EAVQEFVD--------KEE-------KDAIEELVKYQLEKTQRFL-KER------HIDALEDK----------IDEEVRRFRETRQKNTNEEDDEVREAMTRARALRSQS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EESASAFSADDLMSIDLAEQMANDSDDSISAATNKGRGRGRGRRGGRGQNSASRG-----GSQRGR----------------------------AFK-STRQQPSRNV--------------------------------------TTKNYSEVIEVDESDVEEDIF-PTTSKTDQRWSS---T-SSSKIMSQSQVSKGVDFESSEDDDD-DPFMNTSSLRRNRR---------------------------------------------------------------------   [680]
'gi|3912938|gb|AAC78721.1| MRE11 homologue hMre11 [Homo sapiens]'                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M-STADALDDENTFKILVATDIHLG--FME-KD--AARGNDTFVTLDEILRLAQ-EN----------EVDFILLGGDLFHENKPSRKTL-------------HTCLELLRKYCMGDRPVQFEILSDQSVNFG----------------------------------------------------------------------------------------------------------------------------------------FSKFPWVNYQDGN-----------LN----ISIPVFSIHGNH----------DDP--TG---ADALCALDILSCAGFVNHFGRS----------M-----------SVEKI---------DISPVLLQKGSTK-IALYGLGS---------------------IPDERLYRMFVN-KKVTMLRPKEDE-----------NSWFNLFVIHQNRSKH---G-----STNFIPEQFLDDF---------IDLVIWGHEHECKIAP---TKNEQQ-----LFYISQPGSSVVTS----LSPGEAVKKHVGL-LRIK----------------GRKMNMHKIPL-HTVR-------------------QFFMEDIVLANHPDIFNPDNPK-------VTQAIQSF---------------CLEK------------IE-EMLENAERE-------------------RLGNSHQ--------------------------------------------------------------------------------PEKPLVRLRVDYSGG--------FEPFSVLRFSQK-FVDR-------VAN------PKDIIHFFRHR-----EQKEKTGE--------------------------EINFGKLITKP-----SEGTTLRVEDLVKQYFQTAEK---------------------------------------------------------------------------------------------------------------------------------NVQLSLLT-ERGMG-------EAVQEFVD--------KEE-------KDAIEELVKYQLEKTQRFL-KER------HIDALEDK----------IDEEVRRFRETRQKNTNEEDDEVREAMTRARALRSQS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EESASAFSADDLMSIDLAEQMANDSDDSISAATNKGRGRGRGRRGGRGQNSASRG-----GSQRGR----------------------------AFK-STRQQPSRNV--------------------------------------TTKNYSEVIEVDESDVEEDIF-PTTSKTDQRWSS---T-SSSKIMSQSQVSKGVDFESSEDDDD-DPFMNTSSLRRNRR---------------------------------------------------------------------   [680]
'gi|26334321|dbj|BAC30878.1| unnamed protein product [Mus musculus]'                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M-SPTDPLDDEDTFKILVATDIHLG--FME-KD--AVRGNDTFVTFDEILRLAL-EN----------EVDFILLGGDLFHENKPSRKTL-------------HSCLELLRKYCMGDRPVQFEVISDQSVNFG----------------------------------------------------------------------------------------------------------------------------------------FSKFPWVNYQDGN-----------LN----ISIPVFSIHGNH----------DDP--TG---ADALCALDVLSCAGFVNHFGRS----------M-----------SVEKV---------DISPVLLQKGSTK-LALYGLGS---------------------IPDERLYRMFVN-KKVTMLRPKEDE-----------NSWFNLFVIHQNRSKH---G-----NTNFIPEQFLDDF---------IDLVIWGHEHECKIGP---IKNEQQ-----LFYVSQPGSSVVTS----LSPGEAVKKHVGL-LRIK----------------GRKMNMQKLPL-RTVR-------------------RFFIEDVVLANHPNLFNPDNPK-------VTQAIQSF---------------CLEK------------IE-EMLDSAERE-------------------RLGNPQQ--------------------------------------------------------------------------------PGKPLIRLRVDYSGG--------FEPFNVLRFSQK-FVDR-------VAN------PKDVIHFFRHR-----EQKGKTGE--------------------------EINFGMLITKP----ASEGATLRVEDLVKQYFQTAEK---------------------------------------------------------------------------------------------------------------------------------NVQLSLLT-ERGMG-------EAVQEFVD--------KEE-------KDAIEELVKYQLEKTQRFL-KER------HIDALEDK----------IDEEVRRFRESRQRNT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [513]
'gi|47225061|emb|CAF97476.1| unnamed protein product [Tetraodon nigroviridis]'                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDEDTFKILIATDIHLG--YLE-KD--AIRGNDTYNTLEEILEHAK-TN----------QVDLILLGGDLFHDNKPTRRCL-------------HSCITMLRKYCMGDSPIHFNILSDQTVNFN----------------------------------------------------------------------------------------------------------------------------------------TTQFPWVNYQDEN-----------LN----ISIPVFSIHGNH----------DDP--TG---AEGLCALDLLSASGLVNHFGHS----------H-----------SVEKI---------EISPVLLQKGSTK-LALYGLGS---------------------IPDERLYRMFVN-NQVTMLRPKENQ-----------DEWFNLFAIHQNRSKH---G-----PTNYIPEQFLDDF---------LDLVVWGHEHECLITA---TRNEQQ-----LFYVTQPGSSVATS----LSPGEATKKHIGL-LRVK----------------GRQMKLDKIPL-KTVR-------------------QFFIQDVVLTDYEDDFTAETPQ-------ATKKVEDL---------------CYAK------------VM-EMLDEAERE-------------------RIGCPLT--------------------------------------------------------------------------------PEKPLIRLRVDYSGG--------FETFNTSRFSQK-FVDR-------VAN------PKDIIHFLRRR-----EKREDPKDE------------------------VNVDYSRVMK------SAAVEGLRVEDLVKQYFEAAEQVKTRTPHSGQARAVRFLVCLADPVTLQ------------------------------------------------------------------------------------------------------TVQLSLLT-EQGMG-------KAIREFVD--------KDE-------KDAIEELITYQLEKTQRHL-QAR------GVTTEQD-----------IDAEHEAEAEEGGPEVVGEGGEVQLRLTQSQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAGAGPRKPRHRAKAQVSCKVR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [569]
'gi|67516549|ref|XP 658160.1| hypothetical protein AN0556.2 [Aspergillus nidulans FGSC A4] >gi|40747499|gb|EAA66655.1| hypotheti'    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSSLGDSETIRILVSTDNHVG--YNE-RD--PIRGDDSWKSFHEVMCLAK-QH----------DVDMVLLAGDLFHENKPSRKSM-------------YQVMRSIRMNCLGDKPCELQLLSDASENFQ-----------------------------------------------------------------------------------------------------------------------------------------GAFNHVNYEDLD-----------IN----VGIPIFSIHGNH----------DDP--SG---EGHLAALDILQVSGLLNYYGRT----------P-----------ESDNI---------QLKPVLLQKGRTK-LALYGMSN---------------------VRDERLFRTFRD-GKVKFFRPSVQK-----------EDWYNLICVHQNHHAY---T-----ETGYLPENFLPEF---------LDLVIWGHEHECLINP---RINPEM-----KFRVMQPGSSVATS----LVPGEAVPKHVAI-LSIK----------------GKEMKCKPIRL-KSVR-------------------PFAMREIVLSEERGAQKLARKEN------NRTEVTRF---------------LMTI------------VE-ELIEEAKAEWLELHRPQRREG---EEEEEDDEELE--------------------------------------------------------------------------------VPLPLVRLRVETSTPEGGS----YDCENPQRFSNR-FVGK-------VAN------VNDVVQFYRKK-----KTATSRKKE------------------------NELDEAALSR------LSTLDTVQVEQLVREFLSQ-------------------------------------------------------------------------------------------------------------------------------------QSLSILP-QNSFG-------DAVSQFID--------KDD-------KHAMEMFVNESLEGQIKHL-LSL--------DRDSDAEDDE--SQSSLQKAMERYRTQMEEMFSKGVKKR-TRGRRRFKPKPDG-----------------------------------WVTEIDGVWEDQPGALIHSDNEGGDPNEEEAGEDGAEP-PVGRISTRGR-------------------------------GKGGRAAASTTTRKTATTKAAAARKPAKSKIT---------------------------------------------TSRARGPRADDDDE-------------PQILKPGEEDEEDEESDSQALFVKQPASKSRKATTKSTTQRSRQTKRTAPSPAPSSNTVSQTTTTARRRREGKQTQLTLDFVGSQSSQHARGSVT-------------------------------------------------------------------------------------SSNTRSMRPNRTTREVSVLSEDIDD-SDGFEPMPSMKYIKYVISYLVRPISINEGSKDELLLEDNICQDHFVDHNMND-------------------------------   [818]
'gi|16944607|emb|CAC28562.2| recombinational repair protein mus-23 [Neurospora crassa] >gi|32172459|sp|Q9C291|MRE11 NEUCR Double'    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MPRSGKVYYAHEEEVSCHTFANRRPEADTIRILVSTDNHVG--YAE-RH--PVRKDDSWRTFDEIMQIAK-KQ----------DVDMVLLGGDLFHENKPSRKSM-------------YQVMRSLRKHCLGMKPCELEFLSDAAEVFE-----------------------------------------------------------------------------------------------------------------------------------------GAFPFVNYEDPD-----------IN----VAIPVFSIHGNH----------DDP--SG---DGHYCSLDLLQAAGLVNYFGRV----------P-----------EADNI---------HVKPILLQKGRTK-MALYGLSN---------------------VRDERMHRTFRD-NKVRFYRPNQQK-----------NDWFNLLALHQNHYAH---T-----RTSYVAENMLPDF---------MDLVIWGHEHECLIDP---VRNPET-----GFHVMQPGSSVATS----LVPGEAVPKHVAI-LNIT----------------GRKFEVDKIPL-KTVR-------------------PFVTREIVLASDKRFKGLD-KQN------NRHEITKR---------------LMVI------------VN-EMIEEANAEWRAVHA----------EDDDMDEDME--------------------------------------------------------------------------------PPLPLVRLKVDYTAPDGAR----YEVENPHRFSNR-FTGK-------VAN------HNDVVRFHCNT-----KGKKNVATA------------------------PGVREDIAEI------LESADTIKVDNLVQEFFAQ-------------------------------------------------------------------------------------------------------------------------------------QSLKILP-QAPFS-------DAVNQFVS--------KDD-------KHAVEMFVIESLSTQVKEL-LQL--------DDDKIVD---------LDAHIQDFRQVMEKSFDAGQHKQ-AQRTKRFKRKPDG-----------------------------------WDSDLDGHWINQPQALEDIPAEVEPKGNDRPTKRVPTSGVTFSDEDEDMDMDNQPVPIRAAPKRGAAAKTTAAAKKAAPGKKAAPAKKAAPAKKAAPAKKAPARGRKKKTPF------------------------------------------------------VDSDEEEEEDYPEDDDEEEEEADEEEEDVIMEDDEEDPPAPPPKPKATSRVASTRASARATPVRATPARATQAR----------------------------------------------------------------------------------------------------------------------------LRLRRPPKPGLLARRLG--------------------------------------------------------------------------------------------   [760]
'gi|57227404|gb|AAW43863.1| meiotic DNA double-strand break processing-related protein, putative [Cryptococcus neoformans var. n'    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSAPNRVPDSQPSSETGDEPPLSIVEPDLENCFRILIATDNHIG--YAE-KD--PVRGQDSINTFREILELAR-DH----------DVDFILLAGDLFHENRPSRTCM-------------HQTIALLREFTLGDKPIEFELLSDPMDGST--------------------------------------------------------------------------------------------------------------------------------------P-GFSFPAVNYEDPN-----------IN----IAIPVFSIHGNH----------DDP--QGTGPEGALCALDVLSVSGVLNYFGKSDLVADESAADN-----------PEKGI---------QIRPVLLRKGTTH-VALYGCGN---------------------IRDQRMYQELRA-NKVKMFMPTGGN-VPD-------SDWFNILLVHQNRVRH---G-----PQNYVPENMFDDS---------MRLVIWGHEHDCRITP---ESVADK-----SYFITQPGSSVATS----LAPGEAIPKHVGL-LSIQ----------------GSQFQLEEIPL-KTVR-------------------PFELDEVVLSYAAEQGAVDLN--------DRDSITSF---------------LREQ------------VE-ALILQAKKNWKEK---------------NNGSTKN--------------------------------------------------------------------------------MMLPLIRLKVETTDA--------KEMVNPVRFGQE-YVNR-------VAN------PRDILQYYRKK-----KNERKVKNN--------------PDMPDIDHDEWEEDPESLTA------DERLSKLRMATLVKQYLQA-------------------------------------------------------------------------------------------------------------------------------------QSLDVLV-ENGME-------DAVMRFVD--------KDD-------KDAIKDFVADTLRMVGRKM-KEK--------EVKEDD----------VDLAMAEAKVKEYNRYADSNPVPPQSVKGKNKQRDSDVDSMAASDDDMDLDE----------------------------------------------------------------------------------------------------MPTQQRAPVRRTTAKQSVRSAKGKGKQPLF-------------------------------------------------------------------------DDASEEEEEEEDE-------EEEEEEPAPTKSRGRAAAASTKKAPAKKAPARTPAKSTTKAPARRVPTASQRSTGRGVTQSQ---------------------------------------------------------------------------------------------------LTFSRSGAGKASAVPIELSSDED--------------------------------------------------------------------------------------   [721]
'gi|50258005|gb|EAL20699.1| hypothetical protein CNBE0640 [Cryptococcus neoformans var. neoformans B-3501A]'                         -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSAPNRVPDSQPSSETGDEPPLSIVEPDLENCFRILIATDNHIG--YAE-KD--PVRGQDSINTFREILELAR-DH----------DVDFILLAGDLFHENRPSRTCM-------------HQTIALLREFTLGDKPIEFELLSDPMDGST--------------------------------------------------------------------------------------------------------------------------------------P-GFSFPAVNYEDPN-----------IN----IAIPVFSIHGNH----------DDP--QGTGPEGALCALDVLSVSGVLNYFGKSDLVADENAADN-----------PEKGI---------QIRPVLLRKGTTH-VALYGCGN---------------------IRDQRMYQELRA-NKVKMFMPTGGN-VPD-------SEWFNILLVHQNRVRH---G-----PQNYVPENMFDDS---------MRLVIWGHEHDCRITP---ESVADK-----SYFITQPGSSVATS----LAPGEAIPKHVGL-LSIQ----------------GSQFQLEEIPL-KTVR-------------------PFELDEVVLSYAAEQGAVDLN--------DRDSITSF---------------LREQ------------VE-ALILQAKKNWKEK---------------NNGSAKN--------------------------------------------------------------------------------MMLPLIRLKVETTDA--------KEMVNPVRFGQE-YVNR-------VAN------PRDILQYYRKK-----KNERKVKNN--------------PDMPDIDHDEWEEDPESLTA------DERLSKLRMATLVKQYLQA-------------------------------------------------------------------------------------------------------------------------------------QSLDVLV-ENGME-------DAVMRFVD--------KDD-------KDAIKDFVADTLRMVGRKM-KEK--------EVKEDD----------VDLAMAEAKVKEYNRYADSNPVPPQSVKGKNKQRDSDVDSMAASDDDMDLDE----------------------------------------------------------------------------------------------------MPTQQRAPVRRTTAKQSVRSAKGKGKQPLF-------------------------------------------------------------------------DDASEEEEEEEDE-------EEEEEEPAPTKSRGRAAAASTKKAPAKKAPARTPAKSTTKAPARRVPTASQRSTGRGVTQSQ---------------------------------------------------------------------------------------------------LTFSRSGAGKASAVPIELSSDED--------------------------------------------------------------------------------------   [721]
'gi|46109634|ref|XP 381875.1| hypothetical protein FG01699.1 [Gibberella zeae PH-1] >gi|42546153|gb|EAA68996.1| hypothetical pro'    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MQRCHSRLTGQRQANRVKYVTAVSASEVVTRIVSHPTPDKMPEFSEADTIRILVATDNHVG--YEE-RD--PIRKDDSWRTFDEVLNLAR-TE----------DVDMVLLAGDLFHDNKPSRKSL-------------YQVMRTLRQNCLGMKPCPLEFLSDAASVFE-----------------------------------------------------------------------------------------------------------------------------------------GAFPHVNYEDPD-----------IN----ISIPVFSIHGNH----------DDP--SG---EGNFCSLDLLQASGLLNYYGRV----------P-----------EADNI---------EAKPILLQKGLTK-LALFGISN---------------------VRDERMFRTFRD-HKVKWFRPGAQM-----------GDWFNLLAVHQNHHAH---T-----ATSYLPENVLPDW---------LDLVVWGHEHECVIDP---TQNPET-----GFHVMQPGSSVATS----LVPGEAVQKHVAI-VSVT----------------GKDFKVDKIPL-KSVR-------------------PFVTRELNLAQDKRFKGLDKKKD------NRQEVTRR---------------LMEV------------VE-EMIEEANADWEAIQT-------------DKEALEE--------------------------------------------------------------------------------RPLPLIRLKVEYTAQDGGQ----FDIENPQRFSNR-FVGK-------VAN------TNDVVYFYRKK-----TASRKTNAA--------------------------NPTGALEAL-----EGGDDMVKVENLVQDFLSA-------------------------------------------------------------------------------------------------------------------------------------QSLKVLP-QGPFG-------DAVNQFVM--------KDD-------KHAMELFVSEHLTGQVRSM-LGL--------ESDDED----------LNSAMDIYRTRIEQQQARGLPTAPTERKRVLKPKPST-----------------------------------WDSDFDGAWEEEADAWTYEDDQ-QTETTRTPAKKATRGKSKAAQEDEDLMDEDEPPAK----------------------KPPAKRAARTTKAKAAPAKKAPAKGRGRKVFE-------------------------------------------------------------------------DSEEEEEEDVVMESEDEPAPPPPPPPPKTRRAAATKSTAKTTAAKPAAKSTRQTK----------------------------------------------------------------------------------------------------------------------------LNFSQSQKSGTQSKAVEISDDEISDDDAFEPAPAPAPRTRRR-------------------------------------------------------------------   [760]
'gi|83768876|dbj|BAE59013.1| unnamed protein product [Aspergillus oryzae]'                                    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MPDLGDAETIRILVATDNHVG--YNE-RD--PIRGDDSWKSFHEVMCLAR-ER----------DVDMVLLAGDLFHENKPSRKSM-------------YQVMRSIRMNCLGDKPCELELLSDASENFQ-----------------------------------------------------------------------------------------------------------------------------------------GAFNHVNYEDLD-----------IN----VAIPIFSIHGNH----------DDP--SG---EGHLAALDILQVSGLLNYYGRT----------P-----------ESDNI---------QVKPVLLQKGRTK-LALYGMSN---------------------VRDERLFRTFRD-GKVKFYQPSVQK-----------EDWFNLICVHQNHHAY---T-----ETGYLPENFLPEF---------LDLVIWGHEHECLINP---KLNPET-----KFHVMQPGSSVATS----LVPGEAVTKQVSI-VSIT----------------GRDFKCEPIPL-KTVR-------------------PFVMKEIVLSEEKGAQKLARKEN------NRTEVTRF---------------LMTI------------VE-ELIEQAKAEWLAM-----------QEDVEEEEELE--------------------------------------------------------------------------------VPLPLVRLRVEISTPEGGS----YDCENPQRFSNR-FVGK-------VAN------VNDVVQFYRKK-----KNAANRKKD------------------------DDVDATAVSQ------LSTLDTVKVEQLVREFLSA-------------------------------------------------------------------------------------------------------------------------------------QSLSILP-QNSFG-------DAVAQFID--------KDD-------KHAMEIWKTCSLEASRRGH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EGRSDSSLNQMAGTVNS-TASGKTNPER-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [518]
'gi|908896|emb|CAA90458.1| rad32 [Schizosaccharomyces pombe] >gi|19113847|ref|NP 592935.1| hypothetical protein SPAC13C5.07 [Sch'    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MPNDPSDMNNELHNENTIRILISSDPHVG--YGE-KD--PVRGNDSFVSFNEILEIAR-ER----------DVDMILLGGDIFHDNKPSRKAL-------------YQALRSLRLNCLGDKPCELELLSDTSLTTG----------------------------------------------------------------------------------------------------------------------------------------DTAVCNINYLDPN-----------IN----VAIPVFSIHGNH----------DDP--SG---DGRYSALDILQVTGLVNYFGRV----------P-----------ENDNI---------VVSPILLQKGFTK-LALYGISN---------------------VRDERLYHSFRE-NKVKFLRPDLYR-----------DEWFNLLTVHQNHSAH---T-----PTSYLPESFIQDF---------YDFVLWGHEHECLIDG---SYNPTQ-----KFTVVQPGSTIATS----LSPGETAPKHCGI-LNIT----------------GKDFHLEKIRL-RTVR-------------------PFIMKDIILSEVSSIPPMVE---------NKKEVLTY---------------LISK------------VE-EAITEANAQWYEAQGTV-----------PVVENEK--------------------------------------------------------------------------------PPLPLIRLRVDYTGG--------YQTENPQRFSNR-FVGR-------VAN------ATDVVQFYLKK-----KYTRSKRND-------------------------GLYTSAVE-------DIKINSLRVESLVNEYLKT-------------------------------------------------------------------------------------------------------------------------------------NRLECLP-EDSLG-------EAVVNFVE--------KDD-------RDAIKECVETQLNKQINLL-VKK--------RVTEEN----------LEQEISSIINDLPKISTTKRKDYEELPEEVSETSINIAEHTPVLKHTSSLLDHHSPL-----------------------------------------------------------------------------------------------ATSSSEHEMEATPSPALLKKTNKRRELPSSLT--------------------------------------------------------------------------------------------KKNTRTPQRSKEVKKVPARKLSQSTKKSDKNTQSTLLFYDPSSTTEAQYLDNEDDEILDD-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [649]
'gi|72014748|ref|XP 788079.1| PREDICTED: similar to Double-strand break repair protein MRE11A (MRE11 homolog 1) (MRE11 meiotic r'    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDEGDENTIKILVATDCHVG--YME-KD--FIRHSDSIDTFEEILQLAQ-KN----------KVDMVLIGGNLFHENTPSKRSL-------------HGVMTLLRKYCMGDRPVQIEFLSDQSVNFA----------------------------------------------------------------------------------------------------------------------------------------ASPFPNVNCEDPN-----------LN----IDMPIFSIHGNH----------DDP--RG---LGTLSALDMLSACGLVNYFGKS----------T-----------SLESV---------EISPILIQKGITK-LAMFGLGS---------------------IRDERLHRMFLS-GKISMLRPKQNA-----------DSWFNIFVIHQNRAKR---S-----RNNYIPAQFLDNF---------IDLVIWGREHECLIDP---VWNATQ-----NFFISQPGSSIATS----LTPGEAVPKHVGL-LQVC----------------GKAMKCTKLKL-ETVR-------------------PFYIEDIALQDTTL---------------DRDDVNAF---------------CTEK------------VE-ALIQRAEDE-------------------HTGNRKQ--------------------------------------------------------------------------------PTLPLIRLQVDCREW--------YNKLNGKRFGQK-FVGR-------VAN------KDDLVWCSKRR-----IQGQTKEDT-----------------------EPVEDLEEFFK------LEALGTERHEDSVCKYFSGTEEVCDHCRYGAAHCCALRLLMEGAFVEKDLIALRISFGMFGFGGRAFCRMASTSLRTESAVSASRVLIEDSTLATISVTGIRLGATAKLRPFFNGILGRCQIWTTFSLSSAERILAMSAAVESNSALAEFLTKQLELLS-EKFLG-------LAVREYVD--------KEK-------KEAIRIVVKHQLSQTQGQL-MNQ--------GTTKDH----------IDDEMSAPELSESATSTAMPMTPLEELESVLLHTRRL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVNESPGLMHRREGGKSGQDTVLRGDARLKVHVVEWMSTDDETHLELRDMQVVNLSDLISILASLCPAVKHFSINSIRVYVSLQLEGASAAVPMADLMHLVSNELEGLTVLTFDRCKVDFPQLISRPQGTGEESSLQELKFLNVENPLSQTDIHKLSEIYPNTKVTVAHDSKASHEDSNQDELVGATARVQIHEEQMATQNTEEGEKEEEGEDYIAMETLPHETGLSWIRLNLVPVPLLPQGSFQGCEWEADVSLECCLPGRV   [913]
'gi|85110705|ref|XP 963591.1| hypothetical protein ( (AB002530) mus-23 [Neurospora crassa N150] ) >gi|32420807|ref|XP 330847.1|'     --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MPRSGKVYYAHEEEVSCHTFANRRPEADTIRILVSTDNHVG--YAE-RH--PVRKDDSWRTFDEIMQIAK-KQ----------DVDMVLLGGDLFHENKPSRKSM-------------YQVMRSLRKHCLGMKPCELEFLSDAAEVFE-----------------------------------------------------------------------------------------------------------------------------------------GAFPFVNYEDPD-----------IN----VAIPVFSIHGNH----------DDP--SG---DGHYCSLDLLQAAGLVNYFGRV----------P-----------EADNI---------HVKPILLQKGRTK-MALYGLSN---------------------VRDERMHRTFRD-NKVRFYRPNQQK-----------NDWFNLLALHQNHYAH---T-----RTSYVAENMLPDF---------MDLVIWGHEHECLIDP---VRNPET-----GFHVMQPGSSVATS----LVPGEAVPKHVAI-LNIT----------------GRKFEVDKIPL-KTVR-------------------PFVTREIVLASDKRFKGLD-KQN------NRHEITKR---------------LMVI------------VN-EMIEEANAEWRAVHA----------EDDDMDEDME--------------------------------------------------------------------------------PPLPLVRLKVDYTAPDGAR----YEVENPHRFSNR-FTGK-------VAN------HNDVVRFHCNT-----KGKSK------------------------------LRELCDQQ------LYDTDNIQRTLQLRQACVR-------------------------------------------------------------------------------------------------------------------------------------TSLRYLS-QPIPS-------RSTTWFKSSLPNSPSRSCR-------KHHSAMRSTSSLARTISTL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKCSSSSHSPPK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [525]
'gi|3434965|dbj|BAA32417.1| mus-23 [Neurospora crassa]'                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MPRSGKVYYAHEEEVSCHTFANRRPEADTIRILVSTDNHVG--YAE-RH--PVRKDDSWRTFDEIMQIAK-KQ----------DVDMVLLGGDLFHENKPSRKSM-------------YQVMRSLRKHCLGMKPCELEFLSDAAEVFE-----------------------------------------------------------------------------------------------------------------------------------------GAFPFVNYEDPD-----------IN----VAIPVFSIHGNH----------DDP--SG---DGHYCSLDLLQAAGLVNYFGRV----------P-----------EADNI---------HVKPILLQKGRTK-MALYGLSN---------------------VRDERMHRTFRD-NKVRFYRPNQQK-----------NDWFNLLALHQNHYAH---T-----RTSYVAENMLPDF---------MDLVIWGHEHECLISP---VRNPET-----GFHVMQPGSSVATS----LVPGERVPKHVAI-LNIT----------------GRKFEVDKIPL-KTVR-------------------PFVTREIVLASDKRFKGLD-KQN------NRHEITKR---------------LMVI------------VN-EMIEEANAEWRAVHA----------EDDDMDEDME--------------------------------------------------------------------------------PPLPLVRLKVDYTAPDGAR----YEVENPHRFSNR-FTGK-------VAN------HNDVVRFHCNT-----KGKSK------------------------------LRELCDQQ------LYDTDNIQRTLQLRQACVR-------------------------------------------------------------------------------------------------------------------------------------TSLRYLS-QPIPS-------RSTTWFKSSLPNSPSRSCR-------KHHSAMRSTSSLARTISTL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKCSSSSHSPPK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [525]
'gi|50546839|ref|XP 500889.1| hypothetical protein [Yarrowia lipolytica] >gi|49646755|emb|CAG83140.1| unnamed protein product [Y'    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTTRGPDTIRILITTDNHVG--YNE-QD--PIRGDDSWKTFHEIMGLAR-TE----------DVDMVLQAGDLFHINKPSRKSM-------------YQVIRSLRMNCYGERPCELELLSDPTLALD-----------------------------------------------------------------------------------------------------------------------------------------QTFNHLNYEDPN-----------IN----VSVPVFAISGNH----------DDS--GG---DAMLCPNDVLAATGLINHFGRV----------T-----------QNDQI---------TVTPLLFRKGSTN-LALYGLAN---------------------VRDERLFRTFAS-GNVEFLRPQDD------------QAWFSLLAVHQNRASH---T-----ETSYLPGNFLPQF---------LNMIIWGHEHECIEVP---EENPEK-----GFHVLQAGSSVATS----LCEGEAKPKYAFI-LCIT----------------GTTYELEKIRL-KTVR-------------------PFVMKEVALSNSGIAPGRE----------AWIEISKY---------------LSME------------ID-GMIEKANSEWLAEHGLA-------EEDVGAGAGVT--------------------------------------------------------------------------------PPLPLIRLRVEYSGG--------YEVENPRRFSNR-YVGR-------VAN------INDVVQFYKKK-----ARDTTGSAA------------------------TQQDLRKAVSRTAD--RQVLDNLKVQTLVEEILGK-------------------------------------------------------------------------------------------------------------------------------------EALCLLP-ENGLG-------EAVASFVD--------KND-------KNAVKAFVDGSLKFQVAEL-LKI-------NDLDEES----------LLTHMGSAKTKGREAVRAGSLVSVREDTPDKRAHSTLSSDGEFETAPTTTATRGRGRGRGSA------------------------------------------------------------------------------------------TRGTTRGRGRGARGGAHSTRASARKPAISKAT--------------------------------------------------------------IIDSDNEVSDSQSDHAVPDDDSDISLVLDSDEEEEVMPVKRSSRRAAVLEDQSPKTTTRSTRSASKVAPKTASRPASKAT------------------------------------------------------------------------------------------------------------PATKPAAKPTSSTSNQTISLLDDDDGFD-----------------------------------------------------------------------------------   [701]
'gi|6323880|ref|NP 013951.1| Subunit of a complex with Rad50p and Xrs2p (RMX complex) that functions in repair of DNA double-str'    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDYPDPDTIRILITTDNHVG--YNE-ND--PITGDDSWKTFHEVMMLAK-NN----------NVDMVVQSGDLFHVNKPSKKSL-------------YQVLKTLRLCCMGDKPCELELLSDPSQVFH----------------------------------------------------------------------------------------------------------------------------------------YDEFTNVNYEDPN-----------FN----ISIPVFGISGNH----------DDA--SG---DSLLCPMDILHATGLINHFGKV----------I-----------ESDKI---------KVVPLLFQKGSTK-LALYGLAA---------------------VRDERLFRTFKD-GGVTFEVPTMRE-----------GEWFNLMCVHQNHTGH---T-----NTAFLPEQFLPDF---------LDMVIWGHEHECIPNL---VHNPIK-----NFDVLQPGSSVATS----LCEAEAQPKYVFI-LDIK---------------YGEAPKMTPIPL-ETIR-------------------TFKMKSISLQDVPHLRPH-----------DKDATSKY---------------LIEQ------------VE-EMIRDANEETKQKLADDG----------EGDMVAE--------------------------------------------------------------------------------LPKPLIRLRVDYSAPSNTQSPIDYQVENPRRFSNR-FVGR-------VAN------GNNVVQFYKKR-----SPVTRSKKS--------------------GINGTSISDRDVEKLF----SESGGELEVQTLVNDLLNK-------------------------------------------------------------------------------------------------------------------------------------MQLSLLP-EVGLN-------EAVKKFVD--------KDE-------KTALKEFISHEISNEVGIL-STN-------EEFLRTD----------DAEEMKALIKQVKRANSVRPTPPKENDETNFAFNGNGLDSFRSSNREVRTGSPDITQSHVDNESRI--------------------------------------------------------------------------------------THISQAESSKPTSKPKRVRTATKKKIPAFSDS---------------------------------------------------------TVISDAENELGDNNDAQDDVDIDENDIIMVS---TDEEDASYGLLNGRKTKTKTRPAASTKTASRRGKGRA-------------------------------------------------------------------------------------------------------------------------------SRTPKTDILGSLLAKKRK----------------------------------------------------------------------------------------   [692]
'gi|50294834|ref|XP 449828.1| hypothetical protein CAGL0M11220g [Candida glabrata CBS138] >gi|49529142|emb|CAG62808.1| unnamed p'    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MELPDEDTIRILITTDNHVG--YNE-ND--PITGDDSWRTFHEIMMLAK-EN----------NADMVLQSGDLFHVNKPSKKSL-------------YQVLKTLRLACMGDKPCELELLSDPSKVFN----------------------------------------------------------------------------------------------------------------------------------------YDEFTDVNYEDPN-----------FN----ISIPMFAISGNH----------DDA--TG---DSLLCPMDVLHATGLVNHFGKV----------L-----------EADKI---------NIAPLLFQKGKTK-LALYGLAS---------------------VREERLFRTFKD-GGVTFEVPTVSE-----------NEWFNILCVHQNHTGH---T-----NTAFLPEQFLPDF---------LNLIIWGHEHECIPNF---MHNPSK-----DFDVLQPGSSVATS----LCEAECKEKHVFI-VELR---------------HETKPKLIPLKL-DTVR-------------------TFKMKTIHLKDEPTLRPH-----------DKEAISKY---------------LVDI------------IE-EMLDEANRETKEKLFPNIPMD-------EIESMGS--------------------------------------------------------------------------------FPLPLIRLRVDYSGPDENP-EIIYQVENPRRFSNR-FVGK-------IAN------TNNIVQFFRAK-----RKPIAKTRK------------------------DGVTTMDIDNELP---FNDGSELQVDDLIADLLKK-------------------------------------------------------------------------------------------------------------------------------------MNLSLLP-ENGMN-------EAMKKFVD--------KDE-------KLALKQFIEKEIHHEVDIL-YNN-------KDFIHGD----------DPEEIKKFIKSVKRANTSDQSSSLDINK---------------------DEAADLLLNGYDNGINK--------------------------------------------------------------------------------------LPAKSSRNSRPSTRQKKNLSSEIIVSEDELES-----------------------------------------------------------------------DHDADLKGYDEDLIEI----SSDEDNYRERRRVRSTKPTKSPKGSAKSSKRSATTRK------------------------------------------------------------------------------------------------------------------------------SARTPKTDILGSLLAKKRK----------------------------------------------------------------------------------------   [656]
'gi|55246032|gb|EAA04178.2| ENSANGP00000013179 [Anopheles gambiae str. PEST] >gi|58378689|ref|XP 308950.2| ENSANGP00000013179 [A'    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSESTTQSTDINPDDTIKILVASDIHLG--YNE-KD--PIRGDDSFIAFEEVLQHAL-EN----------DVDAILLGGDLFHVANPSTNTL-------------DRCFRLLKTYTLGDKPIRLEFLSDQNDNFL----------------------------------------------------------------------------------------------------------------------------------------ESLSRTVNYEDPN-----------MN----IAIPVFSIHGNH----------DDS--GG---AGRVSSMNLLSTNGYVNYFGKW----------T-----------DLSKI---------DIRPILLRKGETK-LALYGLSY---------------------MSDARLCRLLDD-AKVFIEKPDE-------------HGFFSIMVLHQNRAER---G-----PKNYLPESSLPQF---------LDLIIWGHEHDCRIEP---EENAAK-----KFYVSQPGSTVATS----LSEGEAIPKCCGL-LSIH----------------KGLFRMDPIPL-KSVR-------------------PFVFESIDLATVQEELALDEGD-------VQQRVQAF---------------ATER------------IE-AMIERAKQQ-------------------QSGYARQ--------------------------------------------------------------------------------PKLPLIRLRLVLTEV--------EQQFNAIRFGFR-YHGR-------VAN------PQDMVIFKKKP-----KAMVKDELG------------------------KMLDKAALQEAYRN--QREQRAQRAEEIVDRYFRE-----------------------------------------------------ADV----------------------------------------------------------------------------MNQLEVLY-PRSMT-------ELCRRMVD--------YED-------DEACEKIIKFYENKALEFLRAQD--------NLSEEG----------ICEALAGFPAADPEVHEKVLHMLDTR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [528]
'gi|54110880|emb|CAA98292.2| Hypothetical protein ZC302.1 [Caenorhabditis elegans] >gi|72001542|ref|NP 505736.2| yeast MRE recom'    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MCGSDDSFDDFVPDSQEPASSRTRNQDHLDDDEVPCSQRPDAANDTMVEDLDEGDEPAHDESEDIIKILVATDIHCG--YGE-NK--ANIHMDAVNTFEEVLQIAT-EQ----------KVDMILLGGDLFHENNPSREVQ-------------HRVTQLLRQYCLNGNPIALEFLSDASVNFN----------------------------------------------------------------------------------------------------------------------------------------QSVFGHVNYYDQN-----------LN----VGLPIFTIHGNH----------DDL--SG----KGLTALDLLHESGLVNLFGKH----------S-----------NIQEF---------IVSPILLRKGETR-LALYGIGS---------------------QRDDRLVRAFKN-NSISFLRPNAGA-----------EDWFNLFVLHQNRPRR----AMHRSTGNFLPESLIPQF---------FDLLIWGHEHECKPDP---QYVASSEAVGDGFYILQPGSTVATS----LTPEEALQKNAFL-IKIK----------------GRKFASKPIPL-QTVR-------------------PMVCDELLLDKIPPGSRPILKTDRPKHTDGRYIDEIA---------------IEAK------------IN-EMITTAKAK---------------------RRPRQ--------------------------------------------------------------------------------PELPLIRLKVIYDGDWLN-----ITPANAKRIGLR-YENV-------VAN------AVDMVFIKKNN-----KPKEGKLQT-----------------------ENEKNITEMADE-----MGQVSATNLQTIINDYFIN-----------------------------------------------------QPL----------------------------------------------------------------------------VDQMTVLK-PIGIG-------RALEQYSA--------IEEGGLATSANRNFDSCLMHQIDVVRKTL--------KKMPLPPINDPSDLDKFRDLITKDLYDMKKADSERFKNPVADVEMEEDED-DPQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YYMPPQSTSRTNYASG-SEDEVANSDEEMGSSISRHSKQPTTRGRGRGARGAGASRETTRGRSNKVVSTRQIDS--DGFEIINDSPSPPPASRSTRGKARGK-SAPSKKRDLSFF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [728]
'gi|39593405|emb|CAE64875.1| Hypothetical protein CBG09687 [Caenorhabditis briggsae]'                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MCGSDDSFEEFVAESQEPTSSRRRVHS-TNDSEVPCSQRPDAAHDTMVENLEDEDLPVRDEPDDVIKILVA-DIHCG--YGE-NK--PIIHMDAVNTFEEVLQIAT-EQ----------HVDMILLGGDLFHENNPSREVQ-------------HRVTQLLRQYCLNEKPIALEFLSDASVNFN----------------------------------------------------------------------------------------------------------------------------------------QSVFGHVNYYDQN-----------LN----VGLPIFTIHGNH----------DDL--SG----KGLTALDLLHEAGLINLFGKH----------S-----------TIEEF---------IISPILLRKGETR-LALYGLGS---------------------QRDDRLVRAFKE-ENITFLRPNAGA-----------EDWFNLFVLHQNRPRR----AVHRSTGNFLPETLIPQF---------FDLLIWGHEHECKPDP---QYVASSEAVGDGFYILQPGSTVATS----LTAEEALQKNAFV-IKIK----------------GRKFASKPIPL-KTVR-------------------QMVCDELLLDKIPPGSRPVTKSERPKTRDGRYIDEIA---------------IEVK------------LK-EMIAKATEN---------------------RGPRQ--------------------------------------------------------------------------------PELPLIRLKVIYDGDWLH-----VTPANAKRIGLR-YENI-------VAN------AVDMVSIKKNE-----PKTKRRKET---------------------------EGNDVPED-----FGNVSVANLQSIINDYFTQ-----------------------------------------------------KPL----------------------------------------------------------------------------DEQMTVLK-PFGIG-------KALDQYSE--------IEEGGTAAAANRNFDASLMNQINVVRSML--------KKMPLPPIDDSSDLNGFHDLIVKDLFDMKRTESEKSGNPISAPGMEEDEDNDSQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FYIQPQS-SVTNFNDGDDDDQFMDSDEDPIIANSRSSKPSTSRGRGRGSRG-NTVRGSTRGKAAKSTSRPNPDSDDDGFIVINDSPSPPPASRTARGRGRGKTTTTSKKRDISFF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [725]
'gi|62359760|gb|AAX80191.1| endo/exonuclease Mre11 [Trypanosoma brucei] >gi|33348571|gb|AAQ15896.1| endo/exonuclease Mre11 [Tryp'    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGSRVTVLHIIMAERASTQSHALPTSTQADPSLAASTFKFLVTSDNHLG--YQE-RD--SRRGDDSFTTFEECLRAARLEH----------EVDAILLAGDFFHDNKPSLGCL-------------ARTSSLLRSYVLGDKPISFTLLSDPKRNFP----------------------------------------------------------------------------------------------------------------------------------------THPVPLANFQDPN-----------IN----VALPIFMIHGNH----------DDP-------VGGTSSIDILSTAGLVNYFGHT----------S-----------SLDDI---------VVEPVLLKKGDTY-IALYGLGN---------------------VRDDRLHRCFRM-KKLHFVQPKTEPG----------KDWFKILLFHQNRGVRSGGN-----MKCGIYETMLAGH--------GMDLVIWGNEHEQQMEP-----SPSE-----GFDIIQPGSTILTS----LSEHECNPKKYGV-LEVR----------------GGSYRVTGFPL-RSIR-------------------PVVRRTVELWRDNPGCR------------TLDAVEDF---------------LRSV------------VE-QMIEEAEEQVSRIPDDVLKFHPN--------------------------------------------------------------------------------------------IKFPIMRLAVDFTDPDSTT----FPQPNINRFGQQ-YMDI-------VVN------PSELLRPIKPK-----QVPRVASSA-----------------------------SATGGEAPVVPVPRLNTSDIRTKVAEVFNA------------------------------------------------------NA----------------------------------------------------------------------------RDACSLLS-ESEVS-------AAVYAFAE--------KGE-------RDAIDERICELLSKCQKSV-WVSMRRGESESILKPES----------IYEEVVRHKKEANKRYEELSRAAEEALQRSTQGNELTERLRADTELAASMDSGNFPRVGGELADGAALGLLSATAPR------------------------------------------------------------------------------------------------RAGGSGATNNG---EGANDALSQVGFTFPDFS-----------NSLSPPDASGGAA-----------------TR---GKRSRDELNVFDVATERDTNEVNS-HPNASTVKGGGKAVKSETSAPKPARGRKPKRPVDGGVSGLPLFPSLELTRDPVPDENFLLPPVVGGGV-KGASTSSSGMPDNY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [763]
'gi|18496098|emb|CAD20051.1| Mre11 protein [Trypanosoma brucei]'                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGSRVTVLHIIMAERASTQSHALPASTQADPSLAASTFKFLVTSDNHLG--YQE-RD--SRRGDDSFTTFEECLRAARVEH----------EVDAILLAGDFFHDNKPSLGCL-------------ARTSSLLRSYVLGDKPISFTLLSDPKRNFP----------------------------------------------------------------------------------------------------------------------------------------THPVPLANFQDPN-----------IN----VALPIFMIHGNH----------DDP-------VGGTSSIDILSTAGLVNYFGHT----------S-----------SLDDI---------VVEPVLLKKGDTY-IALYGLGN---------------------VRDDRLHRCFRM-KKLHFVQPKTEPG----------KDWFKILLFHQNRGVRSGGN-----MKCGIYETMLAGH--------GMDLVIWGNEHEQQMEP-----SPSE-----GFDIIQPGSTILTS----LSEHECNPKKYGV-LEVR----------------GGSYRVTGFPL-RSIR-------------------PVVRRTVELWRDNPGCR------------TLDAVEDF---------------LRSV------------VE-QMIEEAEEQVSRIPDDVLKFHPN--------------------------------------------------------------------------------------------IKFPIMRLAVDFTDPDSTT----FPQPNINRFGQQ-YMDI-------VVN------PSELLRPIKPK-----QVPRVASSA-----------------------------SATGGEAPVVPVPRLNTSDIRTKVAEVFNA------------------------------------------------------NA----------------------------------------------------------------------------RDACSLLS-ESEVS-------AAVYAFAE--------KGE-------RDAIDERICELLSKCQKSV-WVSMRRGESESILKPES----------IYEEVVRHKKEANKRYEELSRAAEEALQRSTQGNELTERLRADTELAASMDSGNFSRVGGELADGAALGLLSATAPR------------------------------------------------------------------------------------------------RAGGSGATNNG---EGANDALSQVGFTFPDFS-----------NSLSPPDASGGAA-----------------AR---GKRSRDELNVFDVATERDTNEVNS-HPNVSTVKGGGKAVKSETSAPKPARGRKPKRPVDGGVNGLPLFPSLELTREPVPDENFLLPPVVGGGV-KGASTSSSGMPDNY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [763]
'gi|18844723|gb|AAL78283.1| DNA repair protein Mre11 [Trypanosoma brucei brucei]'                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGSRVTVLHIIMAERASTQSHALPTSTQADPSLAASTFKFLVTSDNHLG--YQE-RD--SRRGDDSFTTFEECLRAARVEH----------EVDAILLAGDFFHDNKPSLGCL-------------ARTSSLLRSYVLGDKPISFTLLSDPKRNFP----------------------------------------------------------------------------------------------------------------------------------------THPVPLANFQDPN-----------IN----VALPIFMIHGNH----------DDP-------VGGTSSIDILSTAGLVNYFGHT----------S-----------SLDDI---------VVEPVLLKKGDTY-IALYGLGN---------------------VRDDRLHRCFRM-KKLHFVQPKTEPG----------KDWFKILLFHQNRGVRSGGN-----MKCGIYETMLAGH--------GMDLVIWGNEHEQQMEP-----SPSE-----GFDIIQPGSTILTS----LSEHECNPKKYGV-LEVR----------------GGSYRVTGFPL-RSIR-------------------PVVRRTVELWRDNPGCR------------TLDAVEDF---------------LRSV------------VE-QMIEEAEEQVSRIPDDVLKFHPN--------------------------------------------------------------------------------------------IKFPIMRLAVDFTDPDSTT----FPQPNINRFGQQ-YMDI-------VVN------PSELLRPIKPK-----QVPRVASSA-----------------------------SATGGEAPVVPVPRLNTSDIRTKVAEVFNA------------------------------------------------------NA----------------------------------------------------------------------------RDACSLLS-ESEVS-------AAVYAFAE--------KGE-------RDAIDERICELLSKCQKSV-WVSMRRGESESILKPES----------IYEEVVRHKKEANKRYEELSRAAEEALQRSTQGNELTERLRADTELAASMDSGNFSRVGGELADGAALGLLSATAPR------------------------------------------------------------------------------------------------RAGGSGATNNG---EGANDALSQVGFTFPDFS-----------NSLSPPDASGGAA-----------------TR---GKRSRDELNVFDVATERDTNEVNS-HPNVSTVKGGGKAVKSETSAPKPARGRKPKRPVDGGVNGLPLFPSLELTREPVPDENFLLPPVVGGGV-QGASTSSSGMPDNY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [763]
'gi|70800096|gb|AAZ09937.1| endo/exonuclease Mre11, putative [Leishmania major strain Friedlin] >gi|73544501|ref|XP 848145.1| en'    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSESTFKILLTTDNHLG--FAE-RD--PRRGDDSFTTFEEVLRAARTEH----------DVDAMLLGGDLFHENKPSLGCL-------------VRTCSLFRKYVFGNKAVPFSLLSDPASNFP----------------------------------------------------------------------------------------------------------------------------------------THALPMANFQDPN-----------VN----VALPVFAIHGNH----------DDP-------VGGTSSLDLLATNGYLNYFGHV----------T-----------SLEDI---------ILEPVLLRKGSTF-IALYGLGN---------------------VRDERLHRCFRL-KKVQFVYPKPVPG----------CKWFNILLLHQNRGAR-GVA-----SKNGIMEGMLAGF--------GMDLVIWGNEHEQLMVP-----QPAD-----GFDVVQPGSTIMTS----LSAQECNPKQYGI-LEVR----------------GTSYRLTPYTL-RSVR-------------------PVVRRTVELRQDLPDGR------------TLDAVETF---------------LHSV------------MS-DMISEAEEHVSHIPDDVLAFHPN--------------------------------------------------------------------------------------------LKYPLIRLAVDFTDVTSAP----YPQPNFNRFGQQ-YMDV-------VAN------PGELLRPVKPK-----PERRPGGGA---------------------LGTALGPGGVAASGLIVPAAPQLNTLDIRVKVADVFNH------------------------------------------------------NT----------------------------------------------------------------------------TNACTLLS-EAELS-------AAVYAFAE--------KGE-------RDAIDERLMELLHTSQKSV-WRRLGNGANDSILKPDR----------VAEEVATHKRHVNERYARAAQLEEAQQQQMDDAKENEDDGVANEREGRGGAASPSLHQAARRRELDAFEMMRVAAPPADLTTSHSGSGSENHFHGHFAQTPVSRLVQHAIQ-----------------------------------------QGNENDVDAAVGAPGQRARRCSGVFVKAGADGDGQDDESEELPDDGLDRMPIDSVIAQAVQQ----VYPPSKRARSAHVCDVEAISTGDKGSSCGVGGGGPHEASTVHVFD-GNDDDGSRVHGISRRGRARNEAGNAGKAPAPAKKQQRTTSARRGGGGGSAAARQGALSAANAGSLNAASATAADAGPTLTFVAHQGVSAVLPPGNRPATATSSGGVGASKGAMVNLLSKWTGGF-------------------------------------------------------------------------------------------------------------------------------------------------------------   [853]
'gi|71417575|ref|XP 810598.1| endo/exonuclease Mre11 [Trypanosoma cruzi strain CL Brener] >gi|70875154|gb|EAN88747.1| endo/exonu'    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MASAGNAASSSSTFKFLITTDNHLG--FQE-RD--SRRGNDSFTTFEECLRAARVEH----------DVDAILLGGDLFHDNKPSLGCF-------------ARTTSLLRTYVLGDKPIAFSLLSDPKRNFP----------------------------------------------------------------------------------------------------------------------------------------THPVPLANFQDPN-----------IN----VAIPIFMIHGNH----------DDP-------VGGTSSIDILAANGLVNYFGQV----------F-----------SLDDI---------VVEPILLKKGHTY-VALYGLGN---------------------VRDERLHRCFRM-KKLRFVHPKPVKG----------RLWFKILLLHQNRGVRGGSG-----EKNGIFENMLAGF--------GLDLVIWGNEHEQQMVP-----TPSE-----GFDVIQPGSTILTS----LSGQECNPKQYGV-LEVR----------------EGSYRLTPFPL-RSVR-------------------PVVRRTVELWRENPTGR------------TLDAVEDF---------------LRRV------------IE-EMIEEAEEQISRIPDDVLAFHPS--------------------------------------------------------------------------------------------IKFPLMRLSVDFTDPESTN----FPQPNINRFGQQ-YMDV-------VVN------PGDLLRPLKPK-----PVIRRLPSA-----------------------------PGGDGTM-VVPVPLVNTSDIRTKVAEVFNA------------------------------------------------------NA----------------------------------------------------------------------------RDACSLLS-EPEVS-------AAVYAFAE--------KGE-------RDAIDERINELLNKCQKSV-WKAMGRGDAEGILMPDS----------IYTEVIRYKQDMNKRYAEATRAADASEQ--GQKGQLQESHGKADRAQTGFGRTDFMIVDAFDEGGVPLGAPAASASL------------------------------------------------------------------------------------------------TLNAADCTVQGVCEEEEDDALPETGLERGTLSALIASAVKQDQETTAGPALHAVAA-----------------SRNGGGKRHRDEVEVID--DDEVVDKPHSVQPSVKKGVRRKAASGAAAPAPKPTRGKRGKQ----AAASLIPTPTLQLTHELVPEELASQRPATKQGMPQGALNFLSKWAGQS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [749]
'gi|71654933|ref|XP 816077.1| endo/exonuclease Mre11 [Trypanosoma cruzi strain CL Brener] >gi|70881180|gb|EAN94226.1| endo/exonu'    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MASAGNAASSSSTFKFLITTDNHLG--FQE-RD--SRRGNDSFTTFEECLRAARVEH----------DVDAILLGGDLFHDNKPSLGCF-------------ARTTSLLRTYVLGDKPIAFSLLSDPKRNFP----------------------------------------------------------------------------------------------------------------------------------------THPVPLANFQDPN-----------IN----VAIPIFMIHGNH----------DDP-------VGGTSSIDILAANGLVNYFGQV----------F-----------SLDDI---------VVEPILLKKGHTY-VALYGLGN---------------------VRDERLHRCFRM-KKLRFVHPKPVKG----------RLWFKILLLHQNRGVRGGSG-----EKNGIFENMLAGF--------GLDLVIWGNEHEQQMVP-----TPSE-----GFDVIQPGSTILTS----LSGQECNPKQYGV-LEVR----------------EGSYRLTPFPL-RSVR-------------------PVVRRTVELWRENPTGR------------TLDAVEDF---------------LRRV------------IE-EMIEEAEEQISRIPDDVLAFHPS--------------------------------------------------------------------------------------------IKFPLMRLSVDFTDPESTN----FPQPNINRFGQQ-YMDV-------VVN------PGDLLRPLKPK-----PVIRRLPSV-----------------------------PGGDGTM-VVPVPLVNTSDIRTKVAEVFNA------------------------------------------------------NA----------------------------------------------------------------------------RDACTLLS-EPEVS-------AAVYAFAE--------KGE-------RDAIDERINELLNKCQKSV-WKAMGRGDAEGILMPDS----------IYTEVVRYKQDMNKRYAEATRAGDASEQ--GQKGQLQESHGKADGAQTGFGRTDFMIVDAFDEGGVPLGAPAASASL------------------------------------------------------------------------------------------------TLNAADCTVQGVCEEEEDDALPETGLERGTLSALIASAVKQDQETTAGPALHVVAA-----------------SRNGGGKRHRDEVEVID--DDEDVDKPHSVQPSAKKGVRRKAASGAAAPAPKPTRGKRGKQ----TAASLIPTPTLQLTHELVPEELASQRPATKQGMPQGALNFLSKWAGQS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [749]
'gnl|CMER|CMB035C probable double-strand break repair protein MRE11'                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVQDVAPLRILVTTDNHLG--FEE-RD--AIRGDDSFLAFAEVLSIAR-SE----------AVDLVLLGGDLFHDNKPSRECL-------------YRCMKLLQEYNREAMSSRVVLETIEDGEHS--------------------------------------------------------------------------------------------------------------------------------------------AKANRTSAS-----------WHMQRRAAPPVFAIHGNH----------DDPVVSA---RLSLSPLDILQAAGLLYYWGGT----------T-----------DNDTI---------RVLPLILRKGVSS-VALYGLGH---------------------VREERLYATWQVEKRLVFVEPPSLES--DSEQ----GEYVHVFVLHQNRERR---G-----HTKAVTRDLLPPW---------LDLVIWGHEHPCHIEL------DGM-----QPAITQPGSTVATA----LTQGEALEKHVGL-LEIQ----------------GTSWRWKPLPL-RSVR-------------------PFHYEELHLARSTHEVYR-----------DPVVLERY---------------LREH------------VE-GRLRKLDEEFTRRQHVYGADLVPDQ------------------------------------------------------------------------------------------LRQPLMRLRIEYDEG--------FTPLGPVRFGRN-FLGR-------VAN------PSDMVAFHRRP-----RAPSHKADATGRTSGGDPSAGICAIAGGHAPNATTLRSEETAE------NDPWASISVLDLANFLLSH-------------------------------------------------------T----------------------------------------------------------------------------EQQMSILP-DWKIA-------EAVDHFVN--------KGE-------IRAVSDHVEIWIARLIDHL----EKRHRNAPITDQEE----------LLQETRRFAQQQANRAGFRVSDAGAGVSSSAGPSTNDEL-----------------------------------------------------------------------------------------------------------------TANTRTAASTCSWIHRRSSYLSPNKLRLLEALLREPNEHPTDTEPGVRSTNAS------VPSTAGFEMLDDDRQWSETHSHGGIMTRSCTTSPSTSTSLGDSSDPEVLNERSQGRARQRTSANSGNVQRNASARANRSARQRTRTPRTKRTRHSHAAAR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [719]
;
END;


BEGIN CODONS;
	CODESET  * UNTITLED = Universal: all ;
END;


BEGIN ASSUMPTIONS;
	OPTIONS  DEFTYPE=unord PolyTcount=MINSTEPS ;
	EXSET * UNTITLED  =  1-650 660-670 673-676 689-698 702-711 730-752 758-766 776-2106;
END;


BEGIN MacClade;
	Version 4.0  87;
	LastModified -1053424365;
	FileSettings editor  '0' '0' '1' '1';
	Singles 100;
	Editor 00011001111111100100010010 '1' '8' Geneva '9' '490' '1' all;
	EditorPosition  '47' '21' '979' '1561';
	TreeWindowPosition  '46' '6' '981' '1630';
	ListWindow Characters closed Geneva '9' '50' '10' '273' '366' 000;
	ListWindow Taxa closed Geneva '9' '50' '10' '225' '490' 100000000;
	ListWindow Trees closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow TypeSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow ExSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow CharSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow TaxSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow CharPartitions closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow CharPartNames closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ;
	ChartWindowPosition  '52' '30' '968' '1620';
	StateNamesSymbols closed Geneva '9' '10' '50' '30' '148' '220';
	WindowOrder  Data;
	OtherSymbols &/ 00 ?-;
	Correlation  '0' '0' '1000' '0' '0' 10011010;
	Salmo 00000001;
	EditorFile  '4';
	ExportHTML _ MOSS  '100' 110000;
	PrettyPrint 10;
	EditorToolsPosition  '1006' '35' '115' '165';
	TreeWindowProgram 10;
	TreeWindow 0000;
	Continuous  '0' '3' 1;
	Calculations 0000001;
	SummaryMode  '0' '0' 0;
	Charts  Geneva '9' (normal) 0010;
	NexusOptions  '0' '0' '50' 001011001;
	TipLabel  '1';
	TreeFont  Geneva '9' (normal);
	TreeShape  1.0 1.0 0100;
	TraceLabels 0101;
	ChartColors  '0' '0' '65535' '9' '0' 1;
	ChartBiggestSpot 1;
	ChartPercent 10;
	ChartBarWidth  '10' 1;
	ChartVerticalAxis 10101;
	ChartMinMax  '0';
	TraceAllChangesDisplay  '1' 1;
	BarsOnBranchesDisplay  '0' '0' '60000' '10000' '10000' '10000' '10000' '60000' '65000' '65000' '65000' '6' '1' 0000101;
	ContinuousBranchLabels 0;
	AllStatesBranchLabels 1;
	IndexNotation  '2' 1;
	PrintTree  10.00 '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' Geneva '9' (normal) Geneva '10' (normal) Geneva '9' (normal) Geneva '9' (normal) Geneva '9' (bold ) Geneva '9' (normal) Geneva '9' (normal) '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '1' '1' '1' '1' '0' '0' '-39' '4' '-40' '0' '1' '2' '1' '8' '0' '0' '0' '2' 1000111000000000000100000111000;
	MatchChar 00 .;
	EntryInterpretation 01;
	ColorOptions 00;
	TreeTools  '0' '5' '4' '0' '10' '4' '0' 00100111111101110;
	EditorTools  '0' '0' '0' '1000' '0' '0' '6' '3' '1' 100010101110011;
	PairAlign  '2' '2' '3' '2' '1' '1' '2' '1' '3' 1010;
	BothTools  '1';
END;