#NEXUS 
[MacClade 4.08 registered to Minoru Kubo, ERATO Hasebe Project]


BEGIN DATA;
	DIMENSIONS  NTAX=52 NCHAR=3674;
	FORMAT DATATYPE=PROTEIN  SYMBOLS = " 1 2 3 4"  MISSING=? GAP=- ;
MATRIX
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'gi|30685150|ref|NP 188529.2| VRN1 (REDUCED VERNALIZATION RESPONSE 1) [Arabidopsis thaliana] >gi|21734796|gb|AAM76973.1| reduced'    --M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PRPFFHKLIFSSTIQEKRL---------------------------------------------------------------------RVPDKFVSK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FKDE-LSVAV--ALTVPDGHVWRVGLRKAD--N--------KIWFQDGWQEFVDRYSIRIGYLLIF----RYEGNSAFSVY------------IF-NLSHSEINYHSTGLMDSA--HNHFKRARLFEDLEDEDAEV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFPSSVYPSPLPEST------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VPANKGYASSAI---------------QTLFTGPVKAEE--PTPTPKIPKKRGRKKKN---AD-PEEINSSAPRDDDPE-NRSKFYESASARKRT---VTAE--------------------------------------------------------------------------------------------------------ERERAINAAKTFEPT--------------------------------------------------------------NPFFRV---VLRP----------------------------------------------------------------------SYL----YRGCIM-----------------------------------YLPSG------------------------------------------FAEK-Y--LS-------GISGF-I-----------KV---------QLA------------EK------QWPVRCLYK------AGRAKF-----SQGWYEF----------------T--LENNLGE-GDVCVF-ELL---------------RTRD---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------F--VLKVTAFRVNEYV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [341]
'gi|40806799|gb|AAR92199.1| reduced vernalization response 1 [Brassica rapa]'                                    --M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PRPFFHKLIFSSTIQEKRL---------------------------------------------------------------------RVPDKFVSR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FKDE-LSVAV--ALTVPDGHVWRVGLRKADNNN--------KIWFQDGWQEFVDRYSIRIGYLLIF----RYEGNSAFSVC------------IY-NLPQSEINYHSTGLMDSASHNNHFKRPRLFEDLEDEDAET-------------------------------------------------------------------------------------------------------------------------------------------------------------------------LHTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASAI---------------QSFFTGPVKPEEATPTQTSKVPKKRGRKKKN---ADHPEEVNSSAPRDDDPE-SRSKFYESASARKRT---VNAE--------------------------------------------------------------------------------------------------------ERERAVNAAKTFEPT--------------------------------------------------------------NPFFRV---VLRP----------------------------------------------------------------------SYL----YRGCIM-----------------------------------YLPSG------------------------------------------FAEK-Y--LS-------GISGF-I-----------KV---------QLG------------EK------QWPVRCLYK------AGRAKF-----SQGWYEF----------------T--VENNLGE-GDVCVF-ELL---------------RTRD---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------F--VLKVTAYRVNEYV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [329]
'gi|33943517|gb|AAQ55453.1| reduced vernalization response 1 [Brassica rapa]'                                    --M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PRPFFHKLIFSSTIQEKRL---------------------------------------------------------------------RVPDKFVSK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FKDE-LSVAV--ALTVPDGHVWRVGLRKADNNN--------KIWFQDGWQEFVDRYSIRIGYLLIF----RYEGNSAFSVC------------IY-NLPQSEINYHSTGLMDSASHNNHFKRPRLFEDLEDEDAET-------------------------------------------------------------------------------------------------------------------------------------------------------------------------LHTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASAI---------------QSFFTGPVKPEEATPTQTSKVPKKRGRKKKN---ADHPEEVNSSAPRDDDPE-SRSKFYESASARKGT---VNAE--------------------------------------------------------------------------------------------------------ERERAVNAAKTFEPT--------------------------------------------------------------NPFFRV---VLRP----------------------------------------------------------------------SYL----YRGCIM-----------------------------------YLPSG------------------------------------------FAEK-Y--LS-------GISGF-I-----------KV---------QLG------------EK------QWPVRCLYK------AGRAKF-----SQGWYEF----------------T--VENNLGE-GDVCVF-ELL---------------RTRD---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------F--VLKVTAYRVNEYV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [329]
'gi|87240624|gb|ABD32482.1| Transcriptional factor B3 [Medicago truncatula]'                                    --M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ANEFPPT---------------------------------------------------HFFKIICDQSLHQG--KL-------------------------------------------------------------------IIPRKFVEK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YGEG-LSNAI--YLKTPNGAKWKLNLV-----KSDGK----IW-FEKGWKEFVKYHSLSQGHLLLF----KYGRTSHFHVH------------IF-DKSALEIKYPSQRVESKRVSNDLGNKPQNDE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLEDYIASKKRKTNLSFEFNQ---PYEIGSNSCVNVGKLEKV-AALNHIDKKCKGKQ----LAIA--------------------------------------------------------------------------------------------------------KKVTTFDRANSMRTC--------------------------------------------------------------NPSFIA---VMHP----------------------------------------------------------------------SYIDAACNLMVWVGFSVVWVTEGDASAGIGSIGVTVCWQYLSFSLYGEHIPSE------------------------------------------FGKRHLLGLG-------KKKGD-I-----------HL--------RLLN------------GK------VWPARYLIR-----KGNRKGEKFEMYSSEWKTF----------------A--EDNNLKV-GDVCTF-ELF---------------PTST---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------I-LTFIVHIFRDSFEI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [353]
lcl|Ppa_VRN1_22_1_unnamed_protein_product                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------?FIGFDCSSLFVQ------------------------------------------------------------------------PVPREFSES-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YGDD-LRGPV--SFHGANGKVWSVEVG-----GPAK-----FLGFKGGWRSFVADNSLKRGDQVLF----LLVSTKTFSVY------------VF-NKLGVETIPSPCVTPMRAAPMSGKRKREDVNDEAGMNVRV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------KDEAEDLDAESSDIS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EYEASDTDSSSESEDTEASPQH--------------SGGKVYNDEVCFPVKMKVRRKCTAKVSRVNA---HPTKKSVGGSAGKDGMMY-EAGSCSRTYESLRRK---VTLA--------------------------------------------------------------------------------------------------------ERERALVAANAFVTE--------------------------------------------------------------GPSCPV---VMMP----------------------------------------------------------------------SHV----YRGFWL-----------------------------------TIPGK------------------------------------------FSKA-H--LP-------NDRIN-I-----------KL--------QDIH------------GF------QWSASWIKS------DHHTGV-----SGGWAAF----------------S--RDHRLEE-GDVCVF-EVI---------------DSED---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W--TILVHIFRVVDVDLAPGSRGGWDKNYRIIQPKIHYHPKTREKHLTKKTSSGTAKRNLTGASYSTPSRRQMSKRYKKAPNPEQSDAEDDEDALLSTLCKGNSAAVSDVEDVKPKILSMGPIPQIVKVKQEPNLPAMCNVKQEYGMCSEDMKPTAEKLKASLNLSQPPRDPICEIVKNAGVPAVAKSESGATEPSLNNDARTWYAVVRLLNKRQNEETSELELLVTIRACPRTAESSGVSTDGNGN?---------------------------------------------------------------------------------------   [582]
'gi|77556363|gb|ABA99159.1| B3 DNA binding domain, putative [Oryza sativa (japonica cultivar-group)]'                                --M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEKGCESCREWQEHCYREHMDVSRI---------------------------------------------------RFFRLMTGDFAHGI-----------------------------------------------------------------------SIPEKVADR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FSGQ-ITKGF--NLKAPSGETWRVSVE-----KVADE----LI-LMSGWEDFAKAHELQENDLLFFTCNGRCNGSFSFDVL------------IF-DASGCEKVSCFFIGKK--------NSIGGQTQNAEQYHLS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------DSEDTSTPSTFLVGS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHKAS--------------TSKKLNGKTKTNPNKDDPFSTGKEPEDPNSS---RSHVKHEMIEEEKSDDDD-EHADYEHADYYYSRFANYLTGE--------------------------------------------------------------------------------------------------------EREEIFSLVSLQPG---------------------------------------------------------------NPVFVT---VLQA----------------------------------------------------------------------PQI----HRKGLL-----------------------------------IVPSG------------------------------------------FAAD-H--LD-------SRSQE-I-----------LL--------MRPN------------KKE-----KWYVKYYHA----S-TTRGFN-----CQRWIKF----------------I--RENRLRE-GYICIF-ELM--------------KGARR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------V--TMTVHVIGKVDDRFVLLG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [366]
'gi|87240625|gb|ABD32483.1| Transcriptional factor B3 [Medicago truncatula]'                                    --M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASEIAEVKPI---------------------------------------------------QFFKIILAQNLLQG--NL-------------------------------------------------------------------RMPRKFVEK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YGKG-LPKAI--CLKTPNGAKWRLNLV-----KSDGK----IW-FEKGWKQFAEHHSIGHGHLLLF----RYEKTSKFEVQ------------IF-GKSALEIDYSFKRVESKKFSNGQGNKPPNGE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NCRAAQKRKANSSSEFHR---QCEIASSSCVKFGKSQKL--AVQQVDRMSNGKQV---ITTA--------------------------------------------------------------------------------------------------------KKVTTLERAQSFKIC--------------------------------------------------------------NPSFVV---VMGA----------------------------------------------------------------------SYV----ERRFLL-----------------------------------NIPCL------------------------------------------FGKT-HFDLN-------KKRED-I-----------QL--------QALN------------GR------VWSARYSTRNRTSDNGIRFEL-----TSGWEEF----------------A--KDNNLKV-GDVCKF-ELI---------------SSTI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L--TFIVHVFRETDNDKKKCSTSQSRMN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [324]
lcl|Ppa_VRN1_2_1_unnamed_protein_product                                    --M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ETKACTVCSMNCLKLHGDEDEDADRNKRMLDSSRGRKKDAASHLLP---------------------------------------------------SFLKKMTEVAIKSK--L--------------------------------------------------------------------QMPVSFVRN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVTR-IGKTI--ILEGPSTNKWSVEVWPGSVQKRSLE-------FRDGWQKFVKDHNLQIGDQLCF----TLTSDSHFQVM------------VY-DESGSQKASAMDAINSTVTIKHEPKHLSKVRSDV----RT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGPEARLKQKVTKRI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIKSAVKPTVVVVH--------------SSDSELGNSEPPEKD-ENLKEIISKEKIQ------DCPGMDGSLADPKPLLA-PHILQGGHVVSQRRS---VTPA--------------------------------------------------------------------------------------------------------EKERALNAARDLADTLT------------------------------------------------------------NPKLVM---VMTK----------------------------------------------------------------------AYV----YKGFWM-----------------------------------VLNKV------------------------------------------FSNA-H--MP-------HESRE-V-----------TL--------CNKA------------GH------SWPVKWLFK----TTTNSSGF-----SGGWRGF----------------A--LDNRLEE-SDVCVF-EMV---------------DEKY---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------F--VILVHLFRAIGQPSEDAGDYRPSPGRGRNANRRKRKAIDSPLDTRCTKIKLFHSGDLKSPAGCSRAKYLYHTQSQEAENLAQMVGCSQKQQKDTCTASHGKVLHQDEGKEVTSTAITSSCDTDFTSDNPSSEALETFERRTALQIRPLHAFQFPRRKTGSFRDYLMDLGKELLHEKPRYLRLWKFEMVKTADYNLSCLRELVVAQVIAPSFLEHRL--------------------------------------------------------------------------------------------------------------------   [593]
lcl|Ppa_VRN1_13_1_unnamed_protein_product                                    --M---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKVCEECRRNCLRLHGAEEDDVHPNLLCTPGGSEADKNVQTDRHP---------------------------------------------------SFLKTMTESTIDTL-----------------------------------------------------------------------KLPRSFLLD-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NSGR-LSDSV--ILEGPCREQWRVELHGY---GQSFN----VS-FGQGWSKFVVDHVLQVGDHLVF----FLLQKSYFQVE------------VY-DGFGVQKRSALDAVNTPLKTNTKNVDVVQQSLDLDHGVVQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TEQKKPESATQPENA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AQPL--------------IDLIQSSESESMLMSARKIDMIIAEALRSED---SGHPIMKSPEVEKRKVLP-PHVLVNGTVTSKRRP---VTEL--------------------------------------------------------------------------------------------------------EKARALQAASSLELV--------------------------------------------------------------KPNVLV---VMTK----------------------------------------------------------------------SHV----YRGFLL-----------------------------------SIPKR------------------------------------------FSKD-W--LP-------SETKE-V-----------TL--------TNKS------------GH------TWPAKWL--------ASQGGL-----SAGWRRF----------------S--LDHRLEE-HDVCVL-ELV---------------DKAN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L--VLLVHIFRVLGSPEEDEG---------------------------------------LYFPTNSAVKAFDGKRNISNSPQVHDDHKGVSPYGNGSESDKKGSEHSSRGSDGLNDKSTSEPDKMTNSLKRKICVLGLEALPDKTKALGDQSHRETGTAAIHDVQAAEPDLGVRTRDPCGAELRPTAA----------------RQDLVDFRSTLMKLTKDLLVKNGVGSIVPAKGVLPGNPAANADDVHEQLTNFVDFPTT-------KRQHTLPSVSQEGDGKDQSGEDNANLADAPIIKLIDT----------------------------   [608]
lcl|Ppa_VRN1_14_1_unnamed_protein_product                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------?AVKHISNAFEYLMCDEQ-------------------------------------------------------------------QIPASFVRC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDSR-IGKVV--TLEGPSKENWSVEVGPGTLQRSGLE-------FRDGWQKFVADHNVQIGDHLFF----TLKSYSRFQVMEVTVSLRRRNFQVY-DESGSPKANATAARNSIAAYKDEPKSLSEAQVGTSVIYRS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGPVARPKHKVRRKI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RTKSATKPVVVVGR--------------SSDLELENSDPLVKDITNVTEIVSDSKPQHQ---SDTIEIPDSPGAAQPLLV-PHVVRGGHVISERRA---VTQP--------------------------------------------------------------------------------------------------------EKEKVIHAARLLADTLT------------------------------------------------------------NPKIVV---AMSK----------------------------------------------------------------------AYV----YRGFWM-----------------------------------VLNRP------------------------------------------FSKA-Y--MP-------QESRE-V-----------TL--------CNKA------------GH------EWPVKWLFK----ETNSSSGF-----SGGWRRF----------------S--LDHRLEE-SDVCVF-EIV---------------DETN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------F--VILVHIFRALGQPGEDNSDYRPSSSRDWGVDQRKRKTASNPCVDTNLNYKKPIGFF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [409]
'gi|50901548|ref|XP 463207.1| putative auxin response factor [Oryza sativa (japonica cultivar-group)] >gi|28201564|gb|AAO34502.1'    --M-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GMLKIGKNCSVCKEWQEHCYWSHMADDCK---------------------------------------------------HFLTYMVGDFTESM-----------------------------------------------------------------------IVPSRFANN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FNGH-ISEVV--NLKSPSGKTWSIGVAY----SDTGE----LV-LRSGWKEFVDANGVQENDCLLF----RYSGVSSFDVL------------IF-DPSGCEKASPHFVENRGFGREEKSAGAEGGGRDGDKNGHH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------QHQLEMTPHKNSSSPCIIEMKWGRNQSRLCIIDMYAAMGIIVVTTNIGTYMHERACLAEQDHREEKKEG-----------DDEDEDEDEDEDVDKDGEDRYYFCRHGGRVTEYNLSKGDKEEISRVPVPVEPGNPVLVKVIHASHLLSSRYSTVGVSPEFAGRYLGPAMAREVVMERGGGGGGGDQWHVRFVRRESSRGFHGTGWRRFARDNGLLAHDVCLFELRLVDGAGAGDRLRRRPRPTMAVHVLRRARTAAFARSGKNTATGAIWPTTTVPARFANNFNGHISEEVNLRSPSGETWSIGV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ANSDAGEL--VLQPGWKEFVDGNGIEEGDCLLFRYSGVSSSFDVLIFDPSGCEKASPHFVGSHGFGRAENSAGAEQGGRNGRRTPPIVDGDNGHRH--------------HLEMTLHRNSCRSIPRACKRSLFSDETEAKE---NDGEDEDVVAAAEGGRYG-E----YYFSRHGRVAEYNLREE--------------------------------------------------------------------------------------------------------DREEISRVPVPVQPG--------------------------------------------------------------NPVFVQ---VIHS----------------------------------------------------------------------SHV--RSSKYCIV-----------------------------------GVSPE------------------------------------------FAGK-Y--LG-------AVEREVV-----------LE--------RASR------------GG------EWHVPFVHRQNTRGFY----------GAGWRQF----------------A--GDNRLVA-HDVCLF-ELTMVDAAASGGGNRRRRWSRR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P--TMTVHVLRRQLS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [750]
'gi|77556360|gb|ABA99156.1| B3 DNA binding domain, putative [Oryza sativa (japonica cultivar-group)]'                                ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDVSRI---------------------------------------------------RFFRLMTGDFAHGI-----------------------------------------------------------------------SIPEKVAEI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FSGQ-ITKGF--NLKSPSGETWRVGVA-----KVADE----LI-LKSGWEDFAKAHELQENDLLFFTCNGHGNGSCSFDVL------------IF-DASGCEKVSCFFTGKKNSYMCKNFNSIGGQV--AGQYLSS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------DSEDTSTPSV-LIGS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHKAS--------------TSKKLSGKTKTNPR--------KEPEDPNCS---HWHV----IEEKNTDDD-------EHADYHYTRFANYLTGE--------------------------------------------------------------------------------------------------------ERDEIFSLVSLQPG---------------------------------------------------------------NPVFVV---VLQT----------------------------------------------------------------------AHV----RRRNIL-----------------------------------IVPTR------------------------------------------FAAD-H--LE-------RKSHD-I-----------LL--------IRPN------------RKQ-----KWSVKYYYL----SNTTRGFN-----CHRWIKF----------------I--RENRLRE-GNVCIF-ELM--------------KGARR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P--TMTVHVIGKADNRFVLLG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [334]
'gi|50901538|ref|XP 463202.1| putative auxin response factor [Oryza sativa (japonica cultivar-group)] >gi|28201553|gb|AAO34491.1'    --M---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------APFLASPIRLHPCPLLFSHPHLFGSDYFAFSVKGRGAHLESMRVENKRGNRSWGTDAKRTHPNSIFNQLVRYGYIGTGFPDMNCSLTWSLIGGPSTLSLPSFFPSAHLLLSLALFFFLCIQSNHRMSKSGCERCRGRGFWDTDDQDT---------------------------------------------------YFFKVMIGGFRRQM-----------------------------------------------------------------------TIPYKFAEN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FRDQ-IQGTI--KLKARNGNTCSVLVD-----KCSNK----LV-LTKGWAEFANSHDIKMGDFLVF----RYTGNSQFEVK------------IF-DPSGCVKAASHNAVNIGQHAQNMQGDPIEILSCSDEHLRA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------QSLTTERQNQPEKDV----------------------------------------------------------------------------IDNCNKKMKTEHASSSEDDQETPTAEVHRMKVEEMVRAIHSNHPVFVAVMKKSNVTRQPCYVAISRKYANEYFPGGDQMLTLQRHGKRWQVKFCISKRKLRMLSKGWRKFTRDNELQHWAPLALFITLFFSPHFRKMKKCGQKMRKLNTRSTARDDQEKYFFKVMIGDFHKRMTIPDKFARHFKGVISKTIKLEPRSGYTFDVQVTKKLNILVLGSGWESFVNAHDLNMGDFLVFKYNGDFLLQVLIFDPSGCEKSTSCSMENAIDHVGQGWKEHNDISTSYHDQPKGNKHWMQKDSSSKGNKIGNTRSSNTPSKFSGCILPRGTCLPVVQEKKMKEKIQAIHSKTPMYGNVMTKCNVSGSPCVLEITQLYDDAYLPFNNGQELMLRHRDKSWKVRFYRFKNKSRKLTQASSLYKMRRPGARCREGHAHFNGNHIDGQYKNFFKVMIGRFRERMIIPNEFLQYFRGKIPRTIKLQLRDGCTYDVQVTKNLGKISLQSGWKAFVTAHDLQMGDFLVFSYDGISKLKVLIFGPSGCEKVHSRSTLKNATHCGEKWE---------------------------------------EPLHISSNSHDLPVKSPQNVSKSEKQWDSSE---QENDTANIEEVALQGDDL-QGHPVLNCILPKHTR---LTDM--------------------------------------------------------------------------------------------------------QKQQLESKVGAIHSE--------------------------------------------------------------IPIYGC---ILRK----------------------------------------------------------------------SRV---HGKSQTV-----------------------------------DICRE------------------------------------------YADV-Y--LP-------FKELNMT---------------------LQRH------------GK------NWEVLCRTKDTRTKRL----------STGWSRF----------------A--QENNLQV-GDICLF-ELL---------------KKKE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YSMNVHIIPKK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1029]
'gi|79495605|ref|NP 195054.2| DNA binding / transcription factor [Arabidopsis thaliana] >gi|20145851|emb|CAD29616.1| auxin respo'    --M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EENCEDCMKWEEELYWTHFQTL---------------------------------------------------HFTQLLLPGFHNRL-----------------------------------------------------------------------VIPRKFSTH-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CKRK-LPQIV--TLKSPSGVTYNVGVE-----EDDEK----TMAFRFGWDKFVKDHSLEENDLLVF----KFHGVSEFEVL------------VFDGQTLCEKPTSYFVRKCGHAEKTK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASHTGYEQEEHINSDIDTASAQLPVISP---TSTVRVSEGKYPLSGFKK-MRRELSNDNLDQKADVEMISAG--------------------------------------------------------------------------------------------------------SNKKALSLAKRAIS---------------------------------------------------------------PDGFLV---FMKR----------------------------------------------------------------------SHV----VSKCFL-----------------------------------TIPYK------------------------------------------WCVKNM--L--------ITRQEVV---------------------MQVD------------QT------KWEMKFNIFGA----RGSGGI-----STGWKKF----------------V--QDNNLRE-GDVCVF-EPA---------------NSET---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KPLHLNVYIFRGEETERTNNVDPVYTISE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [337]
'gi|34910734|ref|NP 916714.1| P0022F10.13 [Oryza sativa (japonica cultivar-group)] >gi|20160548|dbj|BAB89497.1| hypothetical pro'    --M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGAGGKKKSPWASGERRP---------------------------------------------------HFFKVLVGDFKQRL-----------------------------------------------------------------------KIPPNFCKHIPWEESRK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKGLKE-ASMAA--TLEGPSGRTWLVVIR-----RTAEG----TF-FTSGWPKFVQDQALRELEFVVF----RYDGNTRFTAM------------VF-DRTACEREDLMGGGGGDRPRKKRGRPRTAAASRDAARPKK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------DSVGKEMVTYRASPS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGQPLQIVDSSWTPEPGSTAVKNEEDADE--------------LPVCELPASSASPPRHVPEGALDADGGAARR---GAAKTRSLQDDLALASIP-PSIRRYKGYVSRRRA---VATA--------------------------------------------------------------------------------------------------------ERQRATEIAHAFRSP--------------------------------------------------------------LPYCVI---RMST----------------------------------------------------------------------MHV----YYSFMM-----------------------------------RFPTG------------------------------------------FSRQ-H--LP-------RERTD-V-----------VL--------RDPG------------GK------VWSVLYIPN-------TRDRL-----SRGWCAF----------------A--RGNCLEE-GDYCVF-ELV---------------AAAE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------F----RVHIFRVVEPAVPAVRLRRVTVTCGRGPT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [402]
lcl|Smo_VRN1_1_1_unnamed_protein_product                                    --M---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRLSDRPAFASVLGEDSIGERDPWLVSSQALLE---------------------------------------------------IFLSCELGSHRDAL--Q--------------------------------------------------------------------PIPQRFVQL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YADG-FAKEC--RIRGPDGAAWGVTLG-----GPSLS----RIGMRGGWETFALAYGLKAGDLLVV----RLVQESVFQVE------------IFGSKSRVNKLPGRFMASFFNAGSREAQERDGQCLEATAVEKD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGSAEDGRTRPRSS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SQIARQTPPRRQPSQEEDGRTRRRSSSRIAASQTPPRQASHEEDGRTTRRSSSRIASQTPPPRQPSHEGDGTTRRRSSSRIPSQAPPSRE--------------EDGRTRWRSSSRIASQTPP---PSRPPPPAK---ASTSKAVVVASTRTRKKN-SEEQSEEKPLSRRRA---VTDA--------------------------------------------------------------------------------------------------------ERERALERARQFTST--------------------------------------------------------------NPFTMN---KMNK----------------------------------------------------------------------SHV----YRGFWMICS------------------------------------------------------------------------------------------------------I-----------VL--------VDSS------------GA------EWPARYLPRPGI--------------SGGWKKF----------------A--LDHRLEE-GDVVIF-ERV---------------DRTQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CNPVIRVHIYRVVEVDDLPQEEEEQARKRRKYSDSSREDLGRREDKEQGRRKGFVSMAEIVELKVAMTCEGCVGAVKRVLGKMQATYSESLVFLAVDFLVGVESFDVDLKEQKVTVKGNVKAEDVLQTVSKTGKATTFWPKEE?-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [566]
'gi|50901518|ref|XP 463192.1| putative auxin response factor [Oryza sativa (japonica cultivar-group)] >gi|28201552|gb|AAO34490.1'    --M----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGQGSQKKKSCDWSKRYVDHLNGKMK---------------------------------------------------CFHLQMSANFGHSM-----------------------------------------------------------------------TIPNKFLDH-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FGGT-LSRTI--ELVSPKGIVYIVKVT-----EHMNK----TI-LQCGWEAFVDAHHIEENDSLLF----RHIENSRFEVL------------IL-DSDGCEKVFTCAGIKKTSSVQERNAAPVDISRSTHDETTQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSGSKKFVRCQRASD-------------------------------SQRGKTAKLAETSSSGES---GE-----------EGTDSSTSEDESSYELDDPQMPPGRNYVLSRWTSLSEAQEEKVDMLVQDIQPEIPVFVAIMKHSNVNSRRACLVIPKRYASAHFPLES------------------------------------------------------------------------------------------------------------------------QTITLQRQGKNKKWYPM-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FYIRKDGSGYMLYGCWKNFVRDNHVKEGDMCIFHLTKFTGGEFGATVHL------------LRETKSGSLGSFHTSHKRFDLRDGRTWPKVTGVRR--------------V----------------------------------------------------SSR-PYLTA--DRVS---LTEE--------------------------------------------------------------------------------------------------------QVRKVEEVVHSIQSE--------------------------------------------------------------GPMYVS---IMNK----------------------------------------------------------------------SNV--GTDGLYII-----------------------------------IFGRQ------------------------------------------FATR-Y--LP-------EGEQTLT-----------LL--------MTGK------------SN------AWQVKMRPR----SGDAQMI------TTGWRHF----------------V--HDNHLQI-EDICLF-QLM--------------NDESK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L--TMTVHIIRRNEKS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [519]
lcl|Smo_VRN1_2_1_unnamed_protein_product                                    --M---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERLSDRPAFASVLGEDSIGERDPWLVSSRALPE---------------------------------------------------IFLSCELGSHRDAL--Q--------------------------------------------------------------------PIPQRFVQL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YADG-FAKEC--RIRGPDGAAWGVTLG-----GPSLS----RIGMRGGWETFALAYGLKAGDLLVV----RLVQESVFQVE------------IFGCKSRVNKLPGRFMASFFNAGSREAQERDGQCLEATAVEKD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGSGEDGRTRPRSS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SQIASQTPPRRQPSQEEDGRTRRTSSSRVAASQTPPRQASHEEDGRTRRRSSSRIASQTPPPRQPSHEGDGTTRRRSSSRIPSQAPPSRE--------------EDGRTRRRSSSRIASQTPPPRQPSPPPPPAK---ASTSKAVVVASTRKRKKN-SEEQSEEKPLSRRRA---VTDA--------------------------------------------------------------------------------------------------------ERERAMERARQFTST--------------------------------------------------------------NPFTMN---KMNK----------------------------------------------------------------------SHV----YRGFWMICS------------------------------------------------------------------------------------------------------I-----------VL--------VDSS------------GA------EWPARYLPRPGI--------------SGGWKKF----------------A--LDHRLEE-GDVVIF-ERV---------------DRTQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CNPVIRVHIYRVVELDDLPQEEEEQARKRRKYSDSS-----RGEDEEQGRRKGIVSMAEIVELKVAMTCEGCVGAVKRVLGKMQATYSESLVFLAVDFLVGVESFDVDLKEQKVTVKGNVKAEDVLQTVSKTGKATTFWPKEE?-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [564]
'gi|77556359|gb|ABA99155.1| B3 DNA binding domain, putative [Oryza sativa (japonica cultivar-group)]'                                --M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKSHRVCKNCVANHYWLHMDNHGK---------------------------------------------------SFIKVMITDFKNGV-----------------------------------------------------------------------TIPAKFARN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FGGQ-MSGTV--KLETRNGKTYEVQVA-----KELNN----LV-LRSGWERFASAYELEKGDILVF----IYSGNSHFKVW------------IY-DPSACEKGLPCIITEQLPRVQQRSISHNNHTQLKRNAKSA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLYVDSSGHSKETSE------------------------------------------------------INPANSPSWKPTERVPSSEELDEPVDLANVQKATKSFYSLPRMCNMTSAQKAEVDALEKRIKPQIPFYITVMDKASATDG---------------------------------------------------------------------------------------------------------------------------LLAISKDYAVSYLLDKNETIKLCHSGRSMTWDI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLDIDTDDQYALSTGWLDFIRNNHLQEGDICVFEASKNKRGVALIFHPLKQSHHPKPPGCVPSTKFPRHGVSKPNYIVSRFTT--------------------------------------------------------------------------------------------------LSGQ--------------------------------------------------------------------------------------------------------LKIKVEAKVQAIQSE--------------------------------------------------------------IPIFVA---VMRE----------------------------------------------------------------------SFI---RGRSRYM-----------------------------------CFSAK------------------------------------------YAAK-Y--LP-------REKNKIM-----------RL--------RLPN------------K-------SYKYKAVFKINNKVHKL---------GGGWGKF----------------V--DDNKIKL-GDICLF-QLM---------------KNKK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLMMMVHIIRKSEFC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [490]
'gi|77556358|gb|ABA99154.1| B3 DNA binding domain, putative [Oryza sativa (japonica cultivar-group)]'                                --M-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GDQKR---------------------------------------------------SFINVMIGDFV--------------------------------------------------------------------------AVPTKFANF-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRGQ-ISEVV--KLEVPNGKTYDVQVA-----KEHNE----LV-LRSGWGAFARDYELKQCDILVF----AYSGSSRFKVR------------IF-NPSGCEKELSCVMMNNTPCGHEGSMSYHDNHLQSPSESSSFFNISLPPHSPFQELSGVDSTSLLVSDPPNMQQFCLRCSWTNPKRLAKPSLAIASLSHQHLAFDKTRCMFILKIENDTLKTILKMFAKNVQGLISGVAKLEVPDGKTYDVEISKEHNELVFRSGWEVFAIAYELEQGDILAFGYSGNSHFKVQIFNPSNCEKELSCVVMNRSISDDNHRQSPRRERMNKPSTTCMDCITNHYWLHMDDRERYFFKVMMSVSDIKDELAIPKKFAANVRGKIPEQVRLEVSDDVPSSEDIKDPMSSGGLQKSKKSCYVLPMLYNMTSAQESEVLALEKKIQPQIPLYITAMDKTSVASG---------------------------------------------------------------------------------------------------------------------------SLVFCKDYAVRYLLDQNRTIKLCQSGGSKTWDI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLDMDTDDLYALSTGWLDFFRCNLLQEGDICVFEASKSKRGVALTFHPFKESHCPKSSEYTLSTKSPTRRVPKRDYFATNLTN--------------------------------------------------------------------------------------------------LTDQ--------------------------------------------------------------------------------------------------------QERK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CFSVK------------------------------------------YASK-Y--LP-------HKDQN-M-----------RL--------RLPE------------T-------KYKCKAALHIDTSTNLHKL-------LKGWGKF----------------V--NDNKLEI-HDICLF-QLM---------------KNKK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLTMTVHIIRKGECS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [661]
'gi|15238713|ref|NP 197301.1| DNA binding / transcription factor [Arabidopsis thaliana] >gi|9757892|dbj|BAB08399.1| unnamed prot'    --M-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKNKAFFGQIMEERDNP---------------------------------------------------AFFKILRREDHSTEMMR--------------------------------------------------------------------MIPHHLIRSI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDKS-SSFKM--VLRVPWGRSWQVKIS-----KNPNF----HYMEDRGWNQFVNDNGLGENEYLTF----THEANMCFNVT------------IF-EADGTEMLRPRK--TITSSSGRNKREERKSIYKDVKKEE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIESWSESSHPCHKT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AESTSGRLTQKQELNL-RKKEADKTEKSKT-----------------------------------------------------------------------------------------------------------------SKKKKVETVSNDSEAGTSSL---------------------------------------------------------IPEFKL---TIKK----------------------------------------------------------------------SHL-------LFL-----------------------------------GIPKK------------------------------------------FVDM-H--MP-------TETTM-F-----------KI--------HYPR------------GKK-----SWDVTYVVTDVQSRF-----------SGGWSRL----------------A--KELGLLV-GDVCTF-KLI---------------KPTE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRVKVSKE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [307]
'gi|7270276|emb|CAB80045.1| hypothetical protein [Arabidopsis thaliana] >gi|4490295|emb|CAB38786.1| hypothetical protein [Arabid'    --M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EENCEDCMKWEEELYWTHFQTL---------------------------------------------------HFTQLLLPGFHNRL--QFMLLFQFLHVFTFLCFPPAFNLEIYTQMYQRGLSNFCFFLSKSVLCGFKSPKIANSSIKITTFCNLLQVIPRKFSTH-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CKRK-LPQIV--TLKSPSGVTYNVGVE-----EDDEK----TMAFRFGWDKFVKDHSLEENDLLVF----KFHGVSEFEVL------------VFDGQTLCEKPTSYFVRKCGHAEKTKGIIDFNATSSRSPKRHF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------NPDDVETTPNQQLVI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SPPVDNELEDLIDIDLDFDIDKILNP--------------LLVASHTGYEQEEHINSDIDTASAQLPVISP---TSTVRVSEGKYPLSGFKK-MRRELSNDNLDQKA------AG--------------------------------------------------------------------------------------------------------SNKKALSLAKRAIS---------------------------------------------------------------PDGFLV---FMKR----------------------------------------------------------------------SHV----VSKCFL-----------------------------------TIPYK------------------------------------------WCVKNM--L--------ITRQEVV---------------------MQVD------------QT------KWEMKFNIFGA----RGSGGI-----STGWKKF----------------V--QDNNLRE-GDVCVF-EPA---------------NSET---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KPLHLNVYIFRGEETERTNNVDPVYTISE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [461]
lcl|Ppa_VRN1_23_1_unnamed_protein_product                                    --M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KTDLEGLRPCASFTETCVESHGAQCQLNEDQSVGAP---------------------------------------------------SFLKMIRDKHLPNN--AGFV-----------------------------------------------------------------RLPSSFMEQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HGPR-IGNVV--TLKGPSGWVGQASVS-----NDE------GFAFCGGWKQFVVHHNIGAGDYVVC----TLIADSKFSVK------------IY-NKFGCEKDHPSHALTPEGPKVHLSIFKPSEGGREFSLTNL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGKRKTLDEVKSLSG--------------------------------------------------------------------------------------------------------------------------------------IGKKLCMQQLGLERSIVEEGNAEIETKLHIASEFKSDHDPDPQQSVDTVRASTPVQVGPLSEDYSSSESEKRNVEMEEIDDIDDCNKAIVRKRAHRAVYETEMRRFMAMEAAQAYETANPRTMLVVNKTAITKSQSWFPEERAQLLLIDDADNKWA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTFIPTASHMVLGAGWAKFVRDNKLEKGDVVVFELKNPNTLTLTVHIFRVKDYTFVRVANLGRTKHPDSSMVSTPSKTDNLSGNARVKHTAESRED--------------NQSPGTSDITELKSQSPMAPQYAAVAKYFAN---RASPSIYGNQKVCDGVVQ-ESEPQKANETNS------TADA--------------------------------------------------------------------------------------------------------ERQRAMDEASEFWTP--------------------------------------------------------------NPHVMV---VLKP----------------------------------------------------------------------SQV----YAGFSL-----------------------------------TLRCA------------------------------------------A-------LP-------DETRD-A-----------TL--------VDST------------GQ------TWMCKWLVNHSGRRL-----------SAGWKRF----------------A--VDHLLEE-GDVCVF-EMI---------------DRIN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L--TLLINIFRIELDDHISEPIEIRKSVELRRPPADPTKRKRKSRAKPKGLGPPVPKLPAYSGCRMEKLGGSSPLPRGANVLPNMPSYKYTALQSRRRPVTMEERRRTELGARNLNTKNPSVTVVMRNSSVYCHFLVVGPFTIL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [742]
'gi|50428689|gb|AAT77040.1| putative transcirption factor(auxin response factor) [Oryza sativa (japonica cultivar-group)]'           --M----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGSGSCMKKSCVCCQKYLEHLDGKMN---------------------------------------------------CFVRRMTADSRRSM-----------------------------------------------------------------------IMPCKFVNH-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FGGD-FSGTI--KLQSPNGILYVVEVT-----KCKNK----TV-LRCGWEAFVDAHHIEENDSLLF----RCVENSRFEVL------------IF-DSDDCEKVFSCAGIRNT------CKSIQEKSSSSCDDTAE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSESEGFARNQKGSF-------------------------------SHRRKTANLA---SSSED---SG-----------EDSPSEHESVESG----DLET-SQEPYVLSRRSYLSEFQKEKVDALIQEIQPETTAFVAIMRKSNVQLPTPFLVISFCYAEVHFPHKS------------------------------------------------------------------------------------------------------------------------VTVTLQRPCKSKKWHPR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FYKRKDARMNILRGSWVEFVKDNRVQEQDICVFVPTKDARRNFTFTVHL------------LRVAAAYSWGG-------------------TGVDR--------------AGSSLGRTDVKSASEISIKEEPIDQEENVSS---RNRNGVSDESEEDEDSEG-PAHPPYIVP--CKSH---LSRL--------------------------------------------------------------------------------------------------------QKKIVEEKVRSFQSK--------------------------------------------------------------FPVYVA---IMKK----------------------------------------------------------------------SNVERSASRCQ-L-----------------------------------ELGAR------------------------------------------FAAAVH--LP-------DR-RQ-T-----------VV--------LQRR------------GE------RWATVMQIR----SGTRRLL------ISGWHRF----------------V--RDNRLRV-GDICLF-EFK-------------THERWR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L--TMAVHAIFREQCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [536]
'gi|15242512|ref|NP 196540.1| DNA binding / transcription factor [Arabidopsis thaliana] >gi|67633794|gb|AAY78821.1| transcriptio'    --M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASNPDFLWCKEERKQE---------------------------------------------------SFFKVLKRSDMSSEDTR--------------------------------------------------------------------AIPYDFVINF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDNE-LSGDM--KFRVQWGNSWKVKIS-----KNPRF----YFMEKSGWEKFVIDNALGDHEFLTF----THKGQMSFTVK------------IF-NKDGKEMMQPPQSRASFASSSRVKTEQDVKREE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EVLVSSDSRSRGPTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAETNRGGSYKRKLNF-GKKKAEETQTYKRTERTQNS----------------------------------------------------------------------------------------------------------KRTERVVSKERVYAGEPSSS---------------------------------------------------------VAGFKI---FISK----------------------------------------------------------------------SYI-------KSL-----------------------------------AIPKP------------------------------------------FGNY----MP-------KEKTR-V-----------KI--------HHPD------------GEK-----TWKVVFVVKERGQIF-----------SGGWKRL----------------C--KEYPVVF-GDTCKF-TLI---------------TPLE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLLVVSKP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [308]
'gi|50428691|gb|AAT77042.1| putative transcription factor(auxin response factor) [Oryza sativa (japonica cultivar-group)]'           --M----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGNTHRKKSCACCKEYLEHLGGKMR---------------------------------------------------CFLRRMAADSMHSM-----------------------------------------------------------------------IMPDRFVSH-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FGGK-IPGTI--KLESPNGILYVVEVT-----ECMNK----TL-LQCGWEAFVDAHNIKEGESLLF----RHIENSRYEVL------------IL-DSDDCEKVFSCAGIRN--------------GSCVQDKTVD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------PVDSSGSSSNDTTQS-------------------------------SRSRNTENLTAMCSSSEK---SG-----------EDSPSGYEFHESV----EPQTPSGSDYVLSRRTYLSEAQKERVVTHIQDIQPEITVFVAVMKKCNLQSPAPYLVISSRYASVHFPRET------------------------------------------------------------------------------------------------------------------------ATITLQRPSKRKKWYPR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FYKRIDKSDHMLRGQWQNFVHDNCLQEEDICLFVPTKGG-RNFAFTVHL------------LQAEVTHSRDG-------------------TDVHK--------------IGSSQNKRNSKMASQVHIKEAP--GGDVSSE---SNKHGVSHESLESEDSDG-PSEPPYISS--MRRR---LSQL--------------------------------------------------------------------------------------------------------QKKTVEEKVRAIQSE--------------------------------------------------------------IPICVA---TISK----------------------------------------------------------------------LAGSGGKGKFRGL-----------------------------------ELSSR------------------------------------------YAAS-Y--LP-------DKNHQ-T-----------LV--------LQCK------------GM------IWQINLVVRRRYTKGKRWFL------TAGWRKF----------------A--HDNRLRV-GDFCLF-ELK---------------KKKK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L--TMEVHIISNLQRYPEVE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [536]
'gi|50923289|ref|XP 472005.1| OSJNBa0020I02.5 [Oryza sativa (japonica cultivar-group)] >gi|38346491|emb|CAE02098.2| OSJNBa0020I0'    --M----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSRGDHGGGGGGRGAARATQLKVLVPSSFRKMRICDELAAQLGVGVGGGGAPRAATARVASPLGKAWDVGVVRDGDGRAFLGRGWAEFAAAHGLGVGWFVVLRHGGGVLAVEAFDTTCCLRVFGAPPAEAGRATDTSRKP---------------------------------------------------QFLTVLLPGIMDKM-----------------------------------------------------------------------RIPDKFVRDY----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITGENLNSNM-AIILSPLGKSWRVELD-----KDQSG----VF-LGGGWLQFLSFHGISRGDVVIF----RYEGNLVFKIS------------VF-GPNGRQKDFKAKGI-SIYQGTGEQQEAPSFSRRKCNNKKK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SRFGEDDGNQ-QEMPCSRKGSGNKGRTSDRET---------------------------------------------------------------------------------------------------------KRMRKTRSVYEIG----------------------------------------------------------------PRSWIK---KEIN----------------------------------------------------------------------EYV----LERCIL-----------------------------------SLART------------------------------------------FCESIG--LV-------EESSITL-------MMIDTTSTQGDQGGSSSS------------SR------SWEVTGRRYKDACYLL----------GAGWRRF----------------C--EDNGVRS-GDVCVF-TVL---------------DTTL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------W----RVDIERC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [427]
'gi|15238737|ref|NP 197310.1| DNA binding / transcription factor [Arabidopsis thaliana] >gi|21618285|gb|AAM67335.1| unknown [Ara'    --M---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KNKAFGQIMDDAENP---------------------------------------------------GFFKILRSADLSSEIMR--------------------------------------------------------------------GIPLNFIKSI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SEEE-LSAKM--LLKVSWGSSWPIKIC-----RNPSF----YFMEKKGWDQFLSDNGLGNDEFLTF----THQGNMCFTVD------------IY-QIDGKELLTPRRSATIASSSGRNKREQRNNIYKDVKEEE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------DIESWSESSYPGHKT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AESTGR----RQRLSL-SNKKAKETEKSK------------------------------------------------------------------------------------------------------------------KKKMKVESISYDSQDDSLSL---------------------------------------------------------VPEFTL---TIKK----------------------------------------------------------------------SYL-------IFL-----------------------------------GIPKM------------------------------------------FEEL-H--MP-------TEATM-F-----------KI--------HDPE------------GKR-----SWDVMYKFSNNQTRF-----------CAGWIRL----------------A--KELGLEI-GDVCTF-TLI---------------KPTE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MLVRVSK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [301]
'gi|15228937|ref|NP 188326.1| DNA binding / transcription factor [Arabidopsis thaliana] >gi|7670025|dbj|BAA94979.1| unnamed prot'    --M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GKSSNIVFDRIKEERQML---------------------------------------------------SFFKIFQRADLSSDCMR--------------------------------------------------------------------ALPYSFISKV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SEKD-FSYKM--VIRAQWGKTWDVEVS-----KNPTY----YYIETRGWDLFVSDNALGQNEFITF----THRGNMVFHVN------------IY-EQNGLEMRKPRKFQTMGPSSGIKKEEGENSLID------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKKEEESDESPGRAEFLV-RKKKTEDSKSSKKK----------------------------------------------------------------------------------------------------------------MTRNKVKKKSKSKSKQVLDG---------------------------------------------------------VPEFKI---TIRK----------------------------------------------------------------------SYL-------KFL-----------------------------------AIPKH------------------------------------------FVDD-H--IP-------NKSKI-F-----------TI--------RHPN------------GG------SWKVLCLVREIRTIF-----------SGGYSKL----------------A--REFPLMV-GDKCTF-KLI---------------KPFE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FVLLTSKKNREKMDQCMID------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [302]
'gi|15240157|ref|NP 201499.1| DNA binding / transcription factor [Arabidopsis thaliana] >gi|9758543|dbj|BAB08937.1| unnamed prot'    --M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDLSKDL---------------------------------------------------QFFKVFLPEFGSHE--L--------------------------------------------------------------------VIPPAFIDM-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LEKP-LPKEA--FLVDEIGRLWCVETK-----TEDTEERFCVF-FTKGWQSFANDQSLEFGDFLVF----SYDGDSRFSVT------------IF-ANDGCKKDVGVVSTTDRSRVSLDEEEPDDIFTKPDR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRDCDCGQSINRKRKRDSVNEDPH---VLVDDKPEYVSTYKTKPE-HSEKTQRTVNRAGDTCDISWFP--------------------------------------------------------------------------------------------------------EKKHNGFEESVYKPK--------------------------------------------------------------HPHFVR---NITR----------------------------------------------------------------------GSLQKL------------------------------------------ELPLT------------------------------------------FLRSNG-----------IELEEDI-----------EL--------CDES------------GK------KWPLKILNHDRGFKFS----------HESWLCF----------------C--KSHEMIL-TNKCLF-EFI--------------VPSNG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RCSEILVRIVSGRLPTTMTKNNYQVIDMQP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [334]
'gi|6729482|emb|CAB67638.1| putative protein [Arabidopsis thaliana]'                                    --M----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADDSELYP---------------------------------------------------RFFKVFLVESASESL----------------------------------------------------------------------MIPLPFMAF-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LADP-LPKTV--KLQGLGGKLWTVSLK-----KISGA----AY-LTRGWPKFAEEHELKNGEFMTF----VYDGHRTFEVS------------VF-DRWGSKEVRAEIQAIPLSDSDSDSVVEDEKDSTDVVE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDDD---EDEDEDEDDDGSFDEDEE-ISQSLYPIDEETATDAA---GN--------------------------------------------------------------------------------------------------------LDVEALT----------------------------------------------------------------------NPHFPT---TLKN------------------------------------------------------------------------------RIYEL-----------------------------------LIPAN------------------------------------------VVKDNN-----------LEFGSSI-----------KY--------IDGE------------GTLVGLRGKWADKRVC------------------FKGWDRI----------------C--RRNRLKKHQDTVEC-ELL--------------HDDQK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVHSIRVHVLRRDA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [283]
'gi|50910133|ref|XP 466555.1| unknown protein [Oryza sativa (japonica cultivar-group)] >gi|47847640|dbj|BAD22126.1| unknown prot'    --MDGAVRGQGCVGRLRSFNKTKKKNRNCSDDMRNGDDEEKKYSHHDMKNNLRNDANEEKRKSSDDMRDGDFEEKKKCSRHDMKKNLRNDANEEKRKSSDDMRDGDDEEKKCSRQDMKKNLRNDADEEKRKSSDDMRDGDDEEKKKRSRHDMKKNSRNDADEEKRKRKRKCSDDLKKSVVNDASKEATSHSDWRKNRKAGSDAEQRGKKLLNGDKKAKSRKVTTPFFEKMRKIKMQRTSNQNGEKNMKSDGDSYKKTVPLSVNKGKMEKDGTNKRTLSNTLVAKERKMRPSDSMEMKMKKKKRDASFVQPDERTAQTFSTKNKEKKRKAPSTPLKREQKERVASSDNKKETKKACIVAIGNEKKNCRDGKKKKRKAAFAFFKFVRDEFEELL-----------------------------------------------------------------------FIPPAVAPS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKDL-IDRHV--YLEDSEGKCSKIRLS-----VVDGS----LA-FYEGWNSFVSEHCIKWGEFLLF----EYTPESTFSVR------------VF-GIDSCERLHFSVKSGGKGAVKKRKERHTLSDDLISHYNGQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------YQDSEDIHDGPNVSG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ESPRSKEPKITVDAEI--------------GTRNLVAKSINAASETQDSERVESGIGYGSL---GALGNKVRNLSNGECDTR-SDSVFCIQEKTRRSEVIIISDEAYSTQVDEDTMKQTAPSEASEIHHVTINTQKDLERVVDGVCCESSVALNNKMGNLILGEPKNKNISPACSTEKTNGSEITPTTGVIPLTQENIDTVKLNTLSCFEEDRSTTRESELAAAIPTTSETHDSDKDLGQKHQRNSVQVNSIIAVDKYPNDSEMNISGNIFRIYEAPAGTRCLEKWKRGIVNGRAALDDIGQVRPEKTQKAGEKLVGNCGAMGESPVDLRIESDVTDTCLKPILNIPIEELSILDSVSISKCGRSRTEVNHLFNQKGATVQLQTKKEPLKPTGSSGNRKGDKIAVSVNRVFAHQSELQIPQQENGNFTSCVTPVALLPAKAELLDLDDHSLQFCIPSTIQKWLELPKS----LPITCRQKGRYDRNVV-----------IL--------KDPM------------RR------LWPVFYHDKPVFVGF-----------TAGWKPF----------------A--AANNLQA-GDVCKFVKEM---------------DEDE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L--AFQVYITRK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1048]
'gi|18409814|ref|NP 566984.1| DNA binding / transcription factor [Arabidopsis thaliana] >gi|21593179|gb|AAM65128.1| unknown [Ara'    --M----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADDSELYP---------------------------------------------------RFFKVFLVESASESL----------------------------------------------------------------------MIPLPFMAF-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LADP-LPKTV--KLQGLGGKLWTVSLK-----KISGA----AY-LTRGWPKFAEEHELKNGEFMTF----VYDGHRTFEVS------------VF-DRWGSKEVRAEIQAIPLSDSDSDSVVEDEKDSTDVVE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDDD---EDEDEDEDDDGSFDEDEE-ISQSLYPIDEETATDAAVFEGN--------------------------------------------------------------------------------------------------------LDVEALT----------------------------------------------------------------------NPHFPT---TLKN------------------------------------------------------------------------------RIYEL-----------------------------------LIPAN------------------------------------------VVKDNN-----------LEFGSSI-----------KY--------IDGE------------GTLVGLRGKWADKRVC------------------FKGWDRI----------------C--RRNRLKKHQDTVEC-ELL--------------HDDQK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVHSIRVHVLRRDA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [286]
'gi|15224180|ref|NP 180041.1| DNA binding / transcription factor [Arabidopsis thaliana] >gi|4572680|gb|AAD23895.1| hypothetical'     --M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ANSRIYP---------------------------------------------------QFFHTLVPSFHTHL-----------------------------------------------------------------------MIPEDFFSEYIEGRSVAELKLDFSDKSWEVKLSDRRITDGWEEFVVANDFRIGDVVAFRYVGNLVFHVSNLGPNYYEIEHNDELPKEKKAKTNSEEADAVSSSSSADKSCFMAIITALDLTTDTLYLPLHFTSANGLTRKNREIILTDGGERSRVLDLRFDESSGTFYISRGWRNFCDENGQKAGGFFLFKLVGKGETLVLSFCPTESINGEENITREDSKDECSSLDSLMNIVEKKKYIPKPRGSPYSSYSPSHKQFVTFTLPPDYARIGKLSLSAPFVRENGINKPGEICLLDKHGRKWLTSLLLDSKGTMSLGKGWKEFVKANSLETGFTLKLIWEETTPVLSLCSPESNSDREQEEISKAIEKHSLFIDPSNRDKISNNDKEENMSWERKKDHLKSRDSTLSSQKQFVTITITPSSDRLVSLSNDSCLVVVSLLYFDMRLPKVFTRENGINKPGRITLLGKDGIKQQTNLLFDKANGAMSLGHGWKDFVKDNGLKTGDSFTLKLIWEDQTPVLSLCPADCSIDREAGGGRSETNQKKSLPIEPSTCKKIRKDVNIKDDNSKEKNDKEESKSVDGERKYLRGTYLTPSSQKHFVTLTITPSSIKKDRLILSPQFARKNNIDKPGMIYLLDTDGTKWLISLQRDKKGTMSLGKGWKEFAEANDFKLGESFTMELVWEDTTPMLSLLRTEFRSSKANEKESISSEHKTRESSPTIKNRIVTPALTPEDVKACKLVTSSNYSCFSEILSAQFARENNINQPGTIYLLDTDGRKWLTTVKRDKKGTMSLGKGWKEFADTKDLKSGDSFTMELIWEDTNPVLSLLRTKFSSSKSNKEESIFLEPKSRDSSSPTIVNRFVTLALTPEDVTACKLILPSQFMKANGINNKLGKITLLGENGVEWPGYMLSLDGTLALGNGWEGFCEANGVKLGQTFTLEFVNEQDTTTTPRIPVAFFLKNIEGR-YEQKTAELRSDASKITWEVKID--------------GQRLTDGWKEFALSHDLRIGDIVVF----RQERDMSFHVT------------ML-GPSCCEIQYGSCSDEERNLEKKKNPNGEAKSSSLDPSCFS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------ANVAPSS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRYDLMLFPMGFVRENGVVGSGKIVLMNEKGRSWNFNLRQKPSCG---TVYVRGGWVSFCDANGLQ-AGDIYTFKLIKRGGTL--------------------------------------------------------------------------------------------------------------VLRLLPKGAESCSLD--------------------------------------------------------------PSCFVA---NVAP----------------------------------------------------------------------STL-----RYDTL-----------------------------------YLPKR------------------------------------------FMRENG--VD-------KRRGE-M-----------IL--------MNEK------------GK------SWTLDLKLKKSCGTSLI---------RRGWRSF----------------C--SANGLRA-GSIITF-KLI---------------KKSGTLVLCLLSNEPEEEVCSEANEVESLSTDQESHEESSHNEK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ISRRKEKKGRMIWKASSSPSENRFVTLNLTPYNILRSALRLPIPFTRMNGINEET--KMTLLDKHGMKWLTTLRLVDYKRKRLGMVGGWKGFIQANGVKANESIMLELIWEEETSCVLKFCSKVKLAIK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1440]
'gi|29725804|gb|AAO89204.1| hypothetical protein [Arabidopsis thaliana]'                                    --M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATNAGYLRCKEERKNE---------------------------------------------------SFFKVVQSINVSSENKR--------------------------------------------------------------------ALPHDFSRSF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TDKE-LSRKM--KIRAQWGNSWEVGIS-----KNPRF----YFMEKSGWEKFVRDNALGNSELLTF----THKGKM?FTVN------------IF-KLDGKEMMQPPQSRSFFASSSRIKTEQEENDIKE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EVVVSSN---RGQTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAE-----SKGRKLNL-GKRAAKESQSSKRTE-------------------------------------------------------------------------------------------------------------------KVVRARSDYAGASSST---------------------------------------------------------AAAFTI---LFKQ----------------------------------------------------------------------GYL-------VFL-----------------------------------RIPNS------------------------------------------VSKD-Q--VP-------DEKTV-F-----------KI--------HHPN------------GKK-----SWNVVYL--ERFGAF-----------SGGWRRV----------------V--KEYPLAV-GDTCKF-TFI---------------KPKE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLLVVSKP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [291]
'gi|57899544|dbj|BAD87058.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]'                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEEVRRHH---------------------------------------------------HFIKVMVGEFARRL-----------------------------------------------------------------------EIPQGFLIHIPEVDHST---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FDAS-LPSSAKGTLQNSEGKTWPVELE-----KLDGH----VF-LTTGWAKFVEDNSLREYEFLLF----RYDDNMHFMVL------------PF-GLNACEKVIRSSGSPQGKLPCDIFCCTKRGRDGDRLTEAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------NSLTPSHSQVLQRTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QGHELISPQSFPDQHEVCGSKDGLDEHLSLNGPMEDDKANAIAEVMSILDVDKVTVELFCAMLVFYKWNVDAVAEDFDICRGKPQIQNLFLKHKLHFQFDIVKRKLRK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FFPPDDYYSSPILESRKCSLEEPKLSNQPLQCDLTTEKCRLVDEHDLCNFSQKKRRKRGSFCSPETPRRSPRLARQNNSHDSAENTLKERSEERQP--------------SPDSMIDQAESRSEQACLCHDKTDSGSLFQD---SKKVKPAHGEVDLCEEPQ-HNQGENEGNLDQVNNKETDEEQ--------------------------------------------------------------------------------------------------------IERNAVETSESFTRRGCIKSSPASCEVPACLRINELSLTWKPAEHV-------------------------------NPLEKVLLDIQRD----------------------------------------------------------------------NFMKTISHVQGIIRNHPSDLLTA-------------------------DVITV------------------------------------------VVQKEI--FKWNCCLKDRDAQRIVNALLEHARKIKEMHNFNSEMRKEEF------------SAKLKVHLKWQLKEV-------------------ETIYTSL----------------E--LDYKKATSDDNIAF-SML--------------HDKKK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLHNLQDEITGLQQSLEMKKDEMQKLAHQVAEHESVFQKSLMERLRIKEVMKGYEQTLAEVKVQLTSTEVGSIDIEALVKVEMDNMTKEIELSKESLLNITFH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [719]
'gi|42569068|ref|NP 179217.2| DNA binding / transcription factor [Arabidopsis thaliana] >gi|60547705|gb|AAX23816.1| hypothetical'    --M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATNAGYLRCKEERKNE---------------------------------------------------SFFKVVQSINVSSENKR--------------------------------------------------------------------ALPHDFSRSF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TDKE-LSRKM--KIRAQWGNSWEVGIS-----KNPRF----YFMEKSGWEKFVRDNALGNSELLTF----THKGKMHFTVN------------IF-KLDGKEMMQPPQSRSFFASSSRIKTEQEENDIKE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EVVVSSN---RGQTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAE-----SKGRKLNL-GKRAAKESQSSKRTE-------------------------------------------------------------------------------------------------------------------KVVRARSDYAGASSST---------------------------------------------------------AAAFTI---LFKQ----------------------------------------------------------------------GYL-------VFL-----------------------------------RIPNS------------------------------------------VSKD-Q--VP-------DEKTV-F-----------KI--------HHPN------------GKK-----SWNVVYL--ERFGAF-----------SGGWRRV----------------V--KEYPLAV-GDTCKF-TFI---------------KPKE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLLVVSKP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [291]
'gi|15235362|ref|NP 195166.1| DNA binding / transcription factor [Arabidopsis thaliana] >gi|7270390|emb|CAB80157.1| putative pro'    --M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASSMASNDFQLPP---------------------------------------------------RFFTVFVSHFSSEFM----------------------------------------------------------------------VIPVSYYDH-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IPHR-FPKTV--ILRGPGGCSWKVATE-----IKDDE----VL-FSQGWPKFVRDNTLNDGDFLTF----AYNGAHIFEVS------------IFRGYDACKEISEVTELEEEEEDSVISLSSEDTDTGAKSEMKN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVPEGRDKGKSKVEVVEDSDDDEEEDSVYSESSEETETDTDSEFKVAKPTIPKSQKKGKKKEQVVESSDDEEDEEEDSDSDYIETFGQLD---IEENSISEEDSSYAPDKE-DTATASFVKPKVANKVANLKR---------------------------------------------------------------------------------------------------------KVDPMIKNPERYLD---------------------------------------------------------------DPKNIHFETNVKN------------------------------------------------------------------------------RLYEL-----------------------------------LVHAQ------------------------------------------LVKDYC-----------LRFGDYV-----------NY--------IDRF------------GKLSAKTAKWKDQRVC------------------IKRWMRI----------------C--KRNKLKK-EDRILC-ELL---------------RKGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FVYAIKLHVIRGKDL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [389]
'gi|56784544|dbj|BAD82806.1| unknown protein [Oryza sativa (japonica cultivar-group)]'                                    --M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VELIKVPKIEQEEGNADSHGKEKADVVHEEKTEKVKRRRKRVSDPQRKKACVDCTKRCIRIHGMASSSSEKARPTPTLP---------------------------------------------------SFFKIMVGYFSENM-----------------------------------------------------------------------DIPLPFART-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITDM-TGSNV--YLEDAYGLRWRVRLY-----LHDD-----VLSFGHGWKNFVLDHDISVGEFLVF----RQIARSVFTVQ------------IF-AISACERIHLCERNKRQSRKRKPGRKTGYPANNQMVKVSS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------KDVVKRRKKQRTDEQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------I-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YDLDPRQHDMPVRVCIDSGSEQRCSESSVKELDAAPDKSHAVVQVPATECNADPSYNAAGMKTIKNLEAIGASSSTKDVTWDANKSEDYPSFSYPE--------------SSNVMTADKESERSHQDRPMQLYCELGLEDG---NAETENCENSNVLENAEL-RTPLAMMDLNEVGIDDIFLSADIYEFDSDFCSPEAFSVDVNTEGLVSNGRTPGDCFGVPETSRCLENKQMTDVPRTSTDDGSIAVHGIDINALPSNTYPDIGQGNTYPDIDAAPDDCKKDKDVLHSECNKVAQKAHSSVKQDITKDGPRQIAAEIMSSDPKTCELTYVRKNSVQPGISSVSQWNNSKGQESGGTK--------SCVVLAVAANSKK----------------------------------------------------------------------FCITIPPPDQTWL-----------------------------------ELPRR--------------------------------------------------LPVLPRTK-KQARKIL-----------IL--------KDPS------------MR------LWPVLYQCTPKFNGF-----------IAGWADI----------------S--RENNLRE-GDTCEF-ELC---------------SNSE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSFQVLVPNLQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [673]
'gi|15230649|ref|NP 187267.1| DNA binding / transcription factor [Arabidopsis thaliana] >gi|6862920|gb|AAF30309.1| hypothetical'     --M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WATKSRRCAVHTSSMASGDVLP---------------------------------------------------RFFTVFLSHCSSESM----------------------------------------------------------------------VIPRSYYNL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPRP-LPKTA--ILIGTGGRFWKVAMT-----SKQEQ----VY-FEQGWGNFVADNQLKEGEFLTF----VFDGHKSYEVS------------IY-GRGDCKETRAVIQVEEISDDTEDDNVSLHS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PSNVSLDSLSNDSHHSTSNVSLRSLSNDS---LHGDAEIESDSEYSPENL-PSASISVESVEVVNPTTSRQRS--------------------------------------------------------------------------------------------------------YKRKTIENPHLYLD---------------------------------------------------------------DPNNVCFETCLKL------------------------------------------------------------------------------RKFEL-----------------------------------LVHAQ------------------------------------------LVKDYG-----------LIFSDNV-----------DY--------IDGY------------GKLTAKTTKWADQRVC------------------INKWQKI----------------C--ERNQFTE-NDSILC-EIL--------------RNEDK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VVYAIKIHIFRDAAAST------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [330]
'gi|25083106|gb|AAN72043.1| Unknown protein [Arabidopsis thaliana]'                                    --M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ARNSDNDMCKEERKRE---------------------------------------------------SFFKVLQRVDISSENMR--------------------------------------------------------------------ALPYDFVRSF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNNE-LSRKM--KIKARWGSSWEVEIC-----KNPRF----YFMEKSGWEKFVSDNALGASEFLTF----THKGNMRFTVN------------IF-MQDGKEVLQPPQSMSFMASSRPPKREQGIP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLATTI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAESNGGGNYKRKLNF-EKKKAEESHNSKRTD-------------------------------------------------------------------------------------------------------------------KVFSVQRESAGASSSS---------------------------------------------------------VAEFSM---FIKK----------------------------------------------------------------------SYL-------IYM-----------------------------------WFPKS------------------------------------------VQSI-H--MP-------KQRTI-F-----------KI--------HHPN------------MKK-----SWNVVYVVSGTKSSF-----------SAGWKGL----------------A--QEYPLAV-GDTCKF-SFI---------------KQHE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LILFVSKP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [288]
'gi|4678216|gb|AAD26962.1| hypothetical protein [Arabidopsis thaliana]'                                    --M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATNAGYLRCKEERKNE---------------------------------------------------SFFKVVQSINVSSENKR--------------------------------------------------------------------ALPHDFSRSF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TDKE-LSRKM--KIRAQWGNSWEVGIS-----KNPRF----YFMEKSGWEKFVRDNALGNSELLTF----THKGKMHFTVN------------IF-KLDGKEMMQPPQSRSFFASS-----KQEENDIKE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EVVVSSN---RGQTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAE-----SKGRKLNL-GKRAAKESQSSKRTE-------------------------------------------------------------------------------------------------------------------KVVRARSDYAGASSST---------------------------------------------------------AAAFTI---LFKQ----------------------------------------------------------------------GYL-------VFL-----------------------------------RIPNS------------------------------------------VSKD-Q--VP-------DEKTV-F-----------KI--------HHPN------------GKK-----SWNVVYL--ERFGAF-----------SGGWRRV----------------V--KEYPLAV-GDTCKF-TFI---------------KPKE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLLVVSKP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [286]
lcl|Ppa_VRN1_17_1_unnamed_protein_product                                    --M-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TNLKVSFESNTRRTGASPPLSNIDVQTMVLNSDAP---------------------------------------------------CFVKTITRAMTERN--DRL------------------------------------------------------------------VIPIEFINK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HGNM-LHSVI--SLTGPNGCPLRVMLKVRTCAGRDGRLNVSVF-MAHGWKYFVTENCLQMGDRIIF----QLVARSRFRVL------------LC-AQPHEEAVFGNLI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSSK--------------------------------------------------------------------------------------------------------DHESQLDSPSVISEAP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLPEV------------------------------------------TSNQTS-----------SLSPSRI-----------NLNAVENC--LNAE------------PM------QWTYSE--------------------RAKIKSV----------------E--GINPLLLSKDICHN-SLG---------------LNSA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------INLNSRYPQFTKKLTGINVPQKGAGDDLRLGCQSSS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [273]
'gi|20152540|emb|CAD29662.1| putative auxin response factor 23 [Arabidopsis thaliana]'                                    --M-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ANASPLSPTNQ---------------------------------------------------HFFQPLLPGFQSNL-----------------------------------------------------------------------KIPVNYFSEH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IEGK-HEGKTVTLRTDASERTWEVKME--------------GHRLTEGWKEFVEAHDLRIGDFVVF----RHEGDMVFHVT------------AL-GPSCCEIQYPQSSRHEEGEESGENEISEKE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEENVQKESDKSSSD--------------------------------------------------------------LNCFSQ---SVTH----------------------------------------------------------------------SNI-----SRDAV-----------------------------------SVPRD------------------------------------------FVKRSG--FS-------KGRHE-I-----------VL--------MNEE------------GK------SWESEVKSYMSGAVYL----------VGGWTTF----------------C--TENKLDV-GDSCTF-KLL---------------QKAKTPVFQLCS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------R-------------------TKVESMNITGESKFVKLTPTP-----------------------------------------SSLALGKSIYR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [275]
'gi|15236040|ref|NP 194897.1| DNA binding / transcription factor [Arabidopsis thaliana] >gi|7270072|emb|CAB79887.1| putative pro'    --M-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ANASPLSPTNQ---------------------------------------------------HFFQPLLPGFQSNL-----------------------------------------------------------------------KIPVNYFSEH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IEGK-HEGKTVTLRTDASERTWEVKME--------------GHRLTEGWKEFVEAHDLRIGDFVVF----RHEGDMVFHVT------------AL-GPSCCEIQYPQSSRHEEGEESGENEISEKE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEENVQKESDKSSSD--------------------------------------------------------------LNCFSQ---SVTH----------------------------------------------------------------------SNI-----SRDAV-----------------------------------SVPRD------------------------------------------FVKRSG--FS-------KGRHE-I-----------VL--------MNEE------------GK------SWESEVKSYMSGAVYL----------VGGWTTF----------------C--TENKLDV-GDSCTF-KLL---------------QKAKTPVFQLCS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------R-------------------TKHLPLSFTKVNGLINPG--KIILVDKDRAEWSMMLKVDSRGAVYIIGGNDWKSFCAANEVGAGESLALELIQGGVLLNQITTCF-QMEQPSFKAEDGRHKRARVQNRS------------------------------------------------------------QETDKGAETSRASTMGPKLEITEKGEPSRASTMRPKVEIREKIAETGEPS---RASNKSSGIEGNLQHTKPCSVKTDQLAKVKESVVDTLTSIGRFQAELETMKRKLEDSLQELN-----------------------------------------------------------------------------------------------------------------   [461]
'gi|30689588|ref|NP 173990.2| DNA binding / transcription factor [Arabidopsis thaliana]'                                    --M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADQSLLHSPINP---------------------------------------------------HFFQPILTESRTHL-----------------------------------------------------------------------NIPVAFFSKH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VEGRNNQNKTVTLRSDASDKTWLVKMD--------------GLKLTDGWEDFAFAHDLRTGDIVVF----RLEGEMVFHVT------------AL-GPSCCEIQYHTSSHNINDDDRNDQINIASRNSSRVKKNPR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKVESSLDHSRFVAKVSAWCLSNDRLYIPLSFARLNGLNKINSKKIYLQNEEGRSWKLVLRHDKSGM---QTFVQSGWRRFCSENGIR-QGQYTFKLVRKSAPPVIRLCRA--------------------------------------------------------------------------------------------------------KAKPKQRSVAEYSSD--------------------------------------------------------------HSCFEG---SVTP----------------------------------------------------------------------SSL-----RNDLL-----------------------------------YLPRS------------------------------------------FVNSNR--LD-------KRCSE-I-----------VL--------KNEQ------------GV------KWPLVLKRFKSVTYL-----------PKGWTSF----------------C--QVNRIKA-GDSFKF-KLV---------------GTWKKPVLSLCPTQSNNHKTPLECSEGNKSEESEEDCLEVKKKKYWSRCRASVENMDDDQTNIGNSSRKKRVSKNPREKVESSSDHSSFVGSVNPSSLYKDQLYLPRNFVSSNFLDKRCSEIVLKNERGEKRTLVLKHFKKDLTFLKKGWTSFCQVNRIKAGDSFKFKLVGTWNKPVLSLCPTETNYHKTPLACSEGNKSEESEEEGTEDKNTSQDCLEVKKRKYWSTCRASAENIDDDQTNIGNSSKEKRVKKNPVKKAESSSDHSSFVANVTASSLNYDRLYLPLSFVSSNGLDKMNGKEIVLLNEEGLSWKFNLKYNQAGK-HTYVRPGWSRFCDANGMSQGQQFTFKLVQKHGPPVMYLSLSEHRPKSESSSHRSYFVGSVTASSIKKDKLYLWKSFVSSNGLDKGCKKIILKNKWGREWKLVLKHYKSNCFTIIKRGWTSFCQGNGLKAGDSFKFKLVGTGEKPVLSLCPAESSHEKIPLECPEGIDDVNSLSSNPSSGDDSSRSEESEEENMEDKNISQDCLETKKRKYCSSSSYSQNRFVTLTLTRSAFQTYKLVSFFNN---------------------YASRL-------------------------------------------S-----------------------------------------   [920]
'gi|9295721|gb|AAF87027.1| T24P13.6 [Arabidopsis thaliana]'                                    --M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADQSLLHSPINP---------------------------------------------------HFFQPILTESRTHL-----------------------------------------------------------------------NIPVAFFSKH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VEGRNNQNKTVTLRSDASDKTWLVKMD--------------GLKLTDGWEDFAFAHDLRTGDIVVF----RLEGEMVFHVT------------AL-GPSCCEIQYHTSSHNINDDDRNDQINIASRNSSRVKKNPR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKVESSLDHSRFVAKVSAWCLSNDRLYIPLSFARLNGLNKINSKKIYLQNEEGRSWKLVLRHDKSGM---QTFVQSGWRRFCSENGIR-QGQYTFKLVRKSAPPVIRLCRA--------------------------------------------------------------------------------------------------------KAKPKQRSVAEYSSD--------------------------------------------------------------HSCFEG---SVTP----------------------------------------------------------------------SSL-----RNDLL-----------------------------------YLPRS------------------------------------------FVNSNR--LD-------KRCSE-I-----------VL--------KNEQ------------GV------KWPLVLKRFKSVTYL-----------PKGWTSF----------------C--QVNRIKA-GDSFKF-KLV---------------GTWKKPVLSLCPTQSNNHKTPLECSEGNKSEESEEDCLEVKKKKYWSRCRASVENMDDDQTNIGNSSRKKRVSKNPREKVESSSDHSSFVGSVNPSSLYKDQLYLPRNFVSSNFLDKRCSEIVLKNERGEKRTLVLKHFKKDLTFLKKGWTSFCQVNRIKAGDSFKFKLVGTWNKPVLSLCPTETNYHKTPLACSEGNKSEESEEEGTEDKNTSQDCLEVKKRKYWSTCRASAENIDDDQTNIGNSSKEKRVKKNPVKKAESSSDHSSFVANVTASSLNYDRLYLPLSFVSSNGLDKMNGKEIVLLNEEGLSWKFNLKYNQAGK-HTYVRPGWSRFCDANGMSQGQQFTFKLVQKHGPPVMYLSLSEHRPKSESSSHRSYFVGSVTASSIKKDKLYLWKSFVSSNGLDKGCKKIILKNKWGREWKLVLKHYKSNCFTIIKRGWTSFCQGNGLKAGDSFKFKLVGTGEKPVLSLCPAESSHEKIPLECPEGIDDVNSLSSNPSSGDDSSRSEESEEENMEDKNISQDCLETKKRKYCSSSSYSQNRFVTLTLTRSAFQTYKLVNGINKPRKITLLGQDGVKKVVDLYQESSSRIMRFGKGWREFFDAQGVKIDDSFVLELIWEKEASPVLKFCTKVPK-----------------------------------------   [984]
'gi|27754629|gb|AAO22760.1| unknown protein [Arabidopsis thaliana]'                                    --M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADQSLLHSPINP---------------------------------------------------HFFQPILTESRTHL-----------------------------------------------------------------------NIPVAFFSKH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VEGRNNQNKTVTLRSDASDKTWLVKMD--------------GLKLTDGWEDFAFAHDLRTGDIVVF----RLEGEMVFHVT------------AL-GPSCCEIQYHTSSHNINDDDRNDQINIASRNSSRVKKNPR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKVESSLDHSRFVAKVSAWCLSNDRLYIPLSFARLNGLNKINSKKIYLQNEEGRSWKLVLRHDKSGT---QTFVQSGWRRFCSENGIR-QGQYTFKLVRKSAPPVIRLCRA--------------------------------------------------------------------------------------------------------KAKPKQRSVAEYSSD--------------------------------------------------------------HSCFEG---SVTP----------------------------------------------------------------------SSL-----RNDLL-----------------------------------YLPRS------------------------------------------FVNSNR--LD-------KRCSE-I-----------VL--------KNEQ------------GV------KWPLVLKRFKSVTYL-----------PKGWTSF----------------C--QVNRIKA-GDSFKF-KLV---------------GTWKKPVLSLCPTQSNNHKTPLECSEGNKSEESEEDCLEVKKKKYWSRCRASVENMDDDQTNIGNSSRKKRVSKNPREKVESSSDHSSFVGSVNPSSLYKDQLYLPRNFVSSNFLDKRCSEIVLKNERGEKRTLVLKHFKKDLTFLKKGWTSFCQVNRIKAGDSFKFKLVGTWNKPVLSLCPTETNYHKTPLACSEGNKSEESEEEGTEDKNTSQDCLEVKKRKYWSTCRASAENIDDDQTNIGNSSKEKRVKKNPVKKAESSSDHSSFVANVTASSLNYDRLYLPLSFVSSNGLDKMNGKEIVLLNEEGLSWKFNLKYNQAGK-HTYVRPGWSRFCDANGMSQGQQFTFKLVQKHGPPVMYLSLSEHRPKSESSSHRSYFVGSVTASSIKKDKLYLWKSFVSSNGLDKGCKKIILKNKWGREWKLVLKHYKSNCFTIIKRGWTSFCQGNGLKAGDSFKFKLVGTGEKPVLSLCPAESSHEKIPLECPEGIDDVNSLSSNPSSGDDSSRSEESEEENMEDKNISQDCLETKKRKYCSSSSYSQNRFVTLTLTRSAFQTYKLVSFFNN---------------------YASRL-------------------------------------------S-----------------------------------------   [920]
'gi|30689117|ref|NP 194896.2| DNA binding / transcription factor [Arabidopsis thaliana] >gi|24817267|emb|CAD56214.1| putative au'    --M-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ANASQLSPTNK---------------------------------------------------HFFKPLLPGFQRNL-----------------------------------------------------------------------NIPVKFFSEH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IEGK-HEGETVKLRADASKRTWEVKMD--------------GNRLTEGWKEFVEAHDLRIRDFVVF----RHEGDMVFHVT------------AL-GPSCCEIQYPQSISHEEGEESGEVEISERE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VEENLQKEYDQSSAD--------------------------------------------------------------LNCFSQ---SVTH----------------------------------------------------------------------SNI-----SNDLV-----------------------------------TLPRD------------------------------------------FAKRNG--LD-------KGMHE-I-----------VL--------MNEE------------GK------SWESEVRSRMSGQVFI----------VGGWKSL----------------C--SENKLKG-GDSCTF-KLL---------------QNAKTPVFQLCS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIGESRFVKLTPTLNSLEIGKQHLPVSFTKGNGLIHPG--EIILVDKDRVEWSMKLQVDNRGGMHIFGGNDWKSFCAANEVGAGESLTLELIRGG--LSPLFKFFSKIEQPSFEAEDRRHKRARVHNGS------------------------------------------------------------QETD-------------------KGEPSRATKMGPELEKREKTAEKGEPS---RASNKSSGKQGNLQKTQACSV-TDHVAKVKESVVDTLTSIRRFQAELETMEQKLEDSLQEINKLS--------------------------------------------------------------------------------------------------------------   [462]
'gi|15242851|ref|NP 200580.1| DNA binding / transcription factor [Arabidopsis thaliana] >gi|9759269|dbj|BAB09590.1| unnamed prot'    --M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLENGFPPYP---------------------------------------------------DFLKIFNSHEDSQLL----------------------------------------------------------------------VIPRSYNRY-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YPNP-LPQTA--VLKNPEGRFWNVQWT-----KSQEV----IISLQEGWVKFVKDNGLIDRDFLLF----TYDGSRSFWVR------------IH-RNGLPLEPTAPIKIQEISDDEDETNGDGDPHMEEEGDT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DENMIVSLSLGSSDEVGDDDDDDYDTAICDE---VNKASGSSKKGRVTRKHR-------------------------------------------------------------------------------------------------------------------------------DDSLASITPQIFLADPN------------------------------------------------------------NPFFISTSSCSRR---------------------------------------------------------------------------------IL-----------------------------------VIARQ------------------------------------------VIKDYG-----------LNFDGTV-----------NL--------IDGF------------GELTRKVGKWKDRVV-------------------IYKWNEM----------------F--TRNKVKQ-GDVIIC-EII---------------REED---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VVRSIKVHFVKN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [300]
'gi|15236028|ref|NP 194891.1| DNA binding / transcription factor [Arabidopsis thaliana] >gi|7270066|emb|CAB79881.1| putative pro'    --M-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADPLIPSPTNK---------------------------------------------------AFFIIDLSGQKSNP-----------------------------------------------------------------------IIPTEFIWNH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FNGK-IQSTNMKLTSDASDRNWDVKLD--------------GARFAGGWKDFSVSHSVRDDDLLSF----RHDGGMVFHVS------------PF-GRSFSQIQLISSSTSDDDDDERTVFDDDEDDDVGDDDDNSISEDDFCSKKI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSKKRARKETESSSD--------------------------------------------------------------KSYLVA---HVTP----------------------------------------------------------------------SSL-----LRDNM-----------------------------------CVLSK------------------------------------------FARSNG--LD-------RRECE-I-----------DL--------RDEH------------EK------SWTLLLRHNKKTGQAFM---------RGGWRSF----------------C--RNNGIKA-GSICRF-KLV---------------QSGIKPVLQLCPNASSIPEGNSSKARKKRNVSEIEGDEIESENC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SETIPLNQNKILTFDLKPYVFRSCQFFLPASFARENGIVEAG--EVTVLNKDGIEWKSHL-VNIKGRDQFYNRGCQDFFVANGVKNVGDPFTLEVIRGGPSPILKICSKVKQAASSDGHKTADRKPRMTDQA----------------------------------------------------------------------------------------------PLAEEQTDNRVEKRAQVTEEGGPSRSTRADPGNLQQKQPCSISDHVKKVKQSIVDTLTDVRRFQSELKVKEQNLEASLQEIDALGMI------------------------------------------------------------------------------------------------------------   [512]
lcl|Smo_VRN1_3_1_unnamed_protein_product                                    --HRGRFYKKGFVGVLLYHDCPHNNVPLWHPDENTPGFLKMPIEGIRFDENRPREEIGVLDLMEDQDRITHTATLAIHLHQEMRQVSLWIPADERMGTLPLEQIPGIPGRFHQAREICLACAIERSSIGRRRAKLAPQKEPRGWPTWHKPLRNPGRRSKLSSWDSSRRGLCLELL-----------------------------------------------------------------------------------------------------------------------------------------------AMAATNSRI---------------------------------------------------SFTKIMKKAHMAEM-----------------------------------------------------------------------PIPKPVYEKYSTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-LRGT---VILELGGSDWQVEVG--------------SGSFTTGWKQFCLDNAIKENDSLVF----HHQSARRFSVE------------LY-SSDGSAKPGGGAKSSTSGGNALAEAMEKVIKECVVHLDEE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSLKFVISKVPRVVD-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VEVAEPSTPRKIVKAAGIGNGPSARTRSSPKTAPPPAAVARVES--------------RKKKKQPLPVSESDAEEEAPPAKRARTEPSK---RRESRVVAAKGGPAGGRA-RCEAGGHSEREEEGGQVGKRNS--------------------------------------------------------------------------------------------------------REEDAREEEDEFCEEIIELQGKEAGYSCGRLGSSRTSGGIQDEQPEHRDSDEEEQHRSVLLPGSHP-----------SPCFCC---SFAV----------------------------------------------------------------------TDT-------------------------------------RSIVVLPQSIPNE------------------------------------------FAKV-H--LP-------EDLKE-F-----------DM--------VDST------------NK------AWGVRWLGP-------PKRAF-----SGGWCYF----------------A--QDHNLQL-NDVCVL-EML---------------GENR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------V----RVNIFKADPKAAQGGGEAAAPPANPAANEGAGFEAAKEDGHGDVDGGDGGDGGGGGGGGGGGGGERDLDAVVTGITGGSNRDEDGIAEEEADDDEEGDDEDYDPKEDDGGDDGGDDGDGGDDKET-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [718]
;
END;


BEGIN CODONS;
	CODESET  * UNTITLED = Universal: all ;
END;


BEGIN ASSUMPTIONS;
	OPTIONS  DEFTYPE=unord PolyTcount=MINSTEPS ;
	EXSET * UNTITLED  =  1-379 389-464 472-1431 1447-1463 1486-1489 1496 1500-1512 1515 1526-2911 2918-2937 2945-2963 2971 2978 2982-2998 3001-3345 3350-3674;
END;


BEGIN MacClade;
	Version 4.0  87;
	LastModified -1052324667;
	FileSettings editor  '0' '0' '1' '1';
	Singles 100;
	Editor 00011001111111100100010010 '1' '8' Geneva '10' '490' '1' all;
	EditorPosition  '46' '6' '1123' '1865';
	TreeWindowPosition  '46' '6' '1131' '1870';
	ListWindow Characters closed Geneva '9' '50' '10' '273' '366' 000;
	ListWindow Taxa closed Geneva '9' '50' '10' '276' '490' 100000000;
	ListWindow Trees closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow TypeSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow ExSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow CharSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow TaxSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow CharPartitions closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow CharPartNames closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ;
	ChartWindowPosition  '52' '30' '1118' '1860';
	StateNamesSymbols closed Geneva '9' '10' '50' '30' '148' '220';
	WindowOrder  Data;
	OtherSymbols &/ 00 ?-;
	Correlation  '0' '0' '1000' '0' '0' 10011010;
	Salmo 00000001;
	EditorFile  '4';
	ExportHTML _ MOSS  '100' 110000;
	PrettyPrint 10;
	EditorToolsPosition  '1015' '42' '115' '165';
	TreeWindowProgram 10;
	TreeWindow 0000;
	Continuous  '0' '3' 1;
	Calculations 0000001;
	SummaryMode  '0' '0' 0;
	Charts  Geneva '9' (normal) 0010;
	NexusOptions  '0' '0' '50' 001011001;
	TipLabel  '1';
	TreeFont  Geneva '9' (normal);
	TreeShape  1.0 1.0 0100;
	TraceLabels 0101;
	ChartColors  '0' '0' '65535' '9' '0' 1;
	ChartBiggestSpot 1;
	ChartPercent 10;
	ChartBarWidth  '10' 1;
	ChartVerticalAxis 10101;
	ChartMinMax  '0';
	TraceAllChangesDisplay  '1' 1;
	BarsOnBranchesDisplay  '0' '0' '60000' '10000' '10000' '10000' '10000' '60000' '65000' '65000' '65000' '6' '1' 0000101;
	ContinuousBranchLabels 0;
	AllStatesBranchLabels 1;
	IndexNotation  '2' 1;
	PrintTree  10.00 '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' Geneva '9' (normal) Geneva '10' (normal) Geneva '9' (normal) Geneva '9' (normal) Geneva '9' (bold ) Geneva '9' (normal) Geneva '9' (normal) '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '1' '1' '1' '1' '0' '0' '-39' '4' '-40' '0' '1' '2' '1' '8' '0' '0' '0' '2' 1000111000000000000100000111000;
	MatchChar 00 .;
	EntryInterpretation 01;
	ColorOptions 00;
	TreeTools  '0' '5' '4' '0' '10' '4' '0' 00100111111101110;
	EditorTools  '0' '0' '0' '1000' '0' '0' '6' '3' '1' 100010101110011;
	PairAlign  '2' '2' '3' '2' '1' '1' '2' '1' '3' 1010;
	BothTools  '1';
END;