#NEXUS 
[MacClade 4.08 registered to Tomoaki Nishiyama, National Institute for Basic Biology]


BEGIN DATA;
	DIMENSIONS  NTAX=82 NCHAR=3077;
	FORMAT DATATYPE=PROTEIN  SYMBOLS = " 1 2 3 4"  MISSING=? GAP=- ;
MATRIX
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'gi|15220993|ref|NP 172004.1| ATP binding / ATP-dependent helicase/ DNA binding / helicase/ nucleic acid binding / ubiquitin-pro'    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MELRSRNKAIRPSTEVVDLEEGTGINPDEEPY----------------------AISSDDDSIGSEFQGDEEEEEELEEVVANDDLPNP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VPVLAIVNLPRASKKRKKPDARKEKVVLLWETWEKEQNSWIDEHMSEDVDLDQHNA------------------------------------------VIAETAE-----------------------------PP-SDLIMPLLRYQKEFLAWATKQEQ---------------------------------------------------------------SVAGGILADEMGMGKTIQAISLVLARREV-------------------------------------------------------------------------------------------------------------------------------------------------------------------DRAQFGEAAGCTLVLCPLVAVSQWLNEIARF-TSPG-STKVLVYHGAKRAK---NIK-----------EFM-------NYDFVLTTYSTVESEYRRNIMPSKVQCAYCSKSFYPKKLVIHLRYFCGPSAVKTAKQSKQKRKK------TSDSSSQQGKEADAGEDKKLKKSKKKTKQTVEKDQLGSD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DKEKSLLHSVKWNRIILDEAHYIKERRSNTARAVFALEA-TYRWALSGTPLQNRVGELYSLIRFLQIRPY-SYYFCKD--CDCRILDYV----AHQSCPHCPHNAVRHFCWWNKYVAKPITVYGSF--GLGKR---AMILL-KHKVLK-DILLR-RTKLGRAAD---------LALPPRIITLRRDTLDVKEFDYYESLYKNSQAEFNTYIEAGTLMNNYAHIFDLLTRLRQAVDHPYLVVY-SNSSGANANLVDENKS--------------------------------------------------------------EQECGLCHD-PA--EDYV--------VTSCAHVFCKACLIGFSASLGK-------------------------------------------------------------------------------------------------------------------VTCPT--C-SKLLTVDWTTKAD-----------------------------------------------------------TEHKASKTTLKGFRASSILNRI-K---LD---------------DFQTSTKIEALREEIRFM----------------------------------------------------VERDGS-----AKAIVFSQFTSFLDLINYTLG-------KCGVSCVQLVGSMTMAARDTAINKFKEDPDC------------------------------------RVFLMSLKAGGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENTVEERILRL-------------QKK--KELVFE--------------------------------GTVG--GS---QE-AIGKLTEEDMRFL-------------------------------------------------------------------------------------------------------------------------------------------FTT-------------   [833]
'gi|50937673|ref|XP 478364.1| putative DNA repair protein [Oryza sativa (japonica cultivar-group)]'                                  --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RRGASSAVIQWAQEIERH-TAKD-SVRVLVYHGGRRGA---QKY-----------DFN-------KYDFVITTYSTIEADYRKHIMPPKTRCCYCDKLFYPNKLKVHLRYYCGPDAQRTEKQAKQESRKWGSKKGTSKRRVQKKKNDSDGEDFEERDGGSGSQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SRGQSPLHSVRWERIILDEAHFIKDRRCNTAKAIFALES-EYKWALSGTPLQNRVGELYSLIRFLQIFPY-SNYFCKD--CNCEILDTL----LKKQC-DCGHSSVRHFCWWNKYISKPIQFGSAS--FEGKR---AMVLL-KEKVLK-GIVLR-RTKKGRAAD---------LALPPKIVTLRRDSFDKNEMEFYEALYTQSRTQFDSYVDAGTLMNNYAHIFDLLTRLRQAVDHPYLVAF-SKT----AELSDRSKN--------------------------------------------------------EGNENMESQCGICHD-MT--EDAV--------VTSCEHVFCKNCLIDYSATLGN-------------------------------------------------------------------------------------------------------------------VSCPS--C-SVPLTVDLTTRSS-------------------------------------------------------------GEKVTPNLKGGKRSGILSRLQN---LA---------------DFKTSTKIDALREEIRNM----------------------------------------------------VEHDGS-----AKGIVFSQFTSFLDLIEFSLQ-------KSGIKCVQLNGKMNIVEKGKAIDTFTNDPDC------------------------------------RIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVESQAQDRIHRIGQFKPIRSMRFVIKDTVEERILQL-------------QEK--KRLVFE--------------------------------GTVG--DS---PE-AMSKLTEADLKFL-------------------------------------------------------------------------------------------------------------------------------------------FQN-------------   [633]
'gi|9972383|gb|AAG10633.1| Similar nucleotide excision repair proteins [Arabidopsis thaliana]'                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTEDDDFDEQNA------------------------------------------VIAEAAE-----------------------------QP-LDLIIPLLKYQKEFLAWATIQEL--------------------------------------------------------------SAVRGGILADEMGMGKTIQAISLVLARREV-------------------------------------------------------------------------------------------------------------------------------------------------------------------DRAKSREAVGHTLVLVPPVALSQWLDEISRL-TSPG-STRVLQYHGPKRDK---NVQ-----------KLM-------NYDFVLTTSPIVENEYRKDEGV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DETMSPLHSIKWNRIIVDEAHDIKNRSSRTAKAVFALEA-TYRWALSGTPLQNDVDELYSLIRFLRVSPY-SYYFCKK--CDCEVLDRS----AHRKCPSCPHNANQHISWWKENVDKRRNR--------------ACIFL-KQNVLK-DILLR-RTKLGRAAD---------LALPSRIISLRRDALSVVEADFYESLYKVSKTTFDGYIQAGTLMNNYAHIFGLLIRLRQAVDHPYLVSY-SSPSGANANLLDANKN--------------------------------------------------------------EKECGFGHD-PS--KDYF--------VTSSEHQASK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKLKGFRASSILNRI-N---LD---------------DFKTSTKIEALREEIRFM----------------------------------------------------VERDWS-----AKAIVFSQFTSFLDLISYALG-------KSGVSCVQLVGSMSKAAKDAALKNFKEEPDC------------------------------------RVLLMSLQAGGVALNLTAASHVFMMDPWWNPAVERQAQDRIHRIGQCKPVRVVRFIMEKTVEEKILTL-------------QKK--KEDLFERFLILNDTLLSTLLVSYCQLYEAYMKTYLLCYSTLG--DS---EEAVVQKLGEDDIKSL-------------------------------------------------------------------------------------------------------------------------------------------FA--------------   [627]
'gi|15217826|ref|NP 171767.1| ATP binding / ATP-dependent helicase/ DNA binding / helicase/ nucleic acid binding [Arabidopsis th'    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAGLRSVHVGSETKVVSKNECAHVTLWTGTAQGDLGVAMEPHSHHKNAILPSSSQDENLKEEEVPD--------------------------DDDSVGGEVQG---------EVNANDYIPNP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAPANTKRKWQIMKEKVQ-----------------MTEDDDFDEQNA------------------------------------------VIAEAAE-----------------------------QP-LDLIIPLLKYQKEFLAWATIQEL--------------------------------------------------------------SAVRGGILADEMGMGKTIQAISLVLARREV-------------------------------------------------------------------------------------------------------------------------------------------------------------------DRAKSREAVGHTLVLVPPVALSQWLDEISRL-TSPG-STRVLQYHGPKRDK---NVQ-----------KLM-------NYDFVLTTSPIVENEYRKDEGV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DETMSPLHSIKWNRIIVDEAHDIKNRSSRTAKAVFALEA-TYRWALSGTPLQNDVDELYSLVSYSFLNFF--------------------------------YSTYASFAFRHTHITFARNV--------------TVKFLIGGNILPLSIPVR-IENVPAVLI---------MQINTSLGGKRRDALSVVEADFYESLYKVSKTTFDGYIQAGTLMNNYAHIFGLLIRLRQAVDHPYLVSY-SSPSGANANLLDANKN--------------------------------------------------------------EKECGFGHD-PS--KDYF--------VTSSEHQASK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKLKGFRASSILNRI-N---LD---------------DFKTSTKIEALREEIRFM----------------------------------------------------VERDWS-----AKAIVFSQFTSFLDLISYALG-------KSGVSCVQLVGSMSKAAKDAALKNFKEEPDC------------------------------------RVLLMSLQAGGVALNLTAASHVFMMDPWWNPAVERQAQDRIHRIGQCKPVRVVRFIMEKTVEEKILTL-------------QKK--KEDLFE--------------------------------STLG--DS---EEAVVQKLGEDDIKSL-------------------------------------------------------------------------------------------------------------------------------------------FA--------------   [678]
lcl|Smo_CHR37_236_2_unnamed_protein_product                                    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAGGKRGSKRQAWSESEDEDYRAEDDAHDPRHAASGSHSDGESVESHRSEKMDPSEESF-------------------QNAETSDEEEASDISAPGKVKMEEDVDVKLLSGSVATAPPFPTVIAPKRRYGTRDEFED-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WTGPSRRKKAKKSKKAVQDEDDDDNYDPATENLEWKQWARELETDIVKMGKCSRWGDDDMEEDQP----------------------------------------KKKVLAQHE-----------------------------TP-SELVFPLLPFQGEFLTWSLSREE--------------------------------------------------------------SNMRGGVLADEMGMGKTIQAISLIIAGRTA--------------------------------------------------------------------------------------------------------------------------------------------------------------GHGHDPNAPDAKNLNTTLVVCPVVAIEQWKSEIERF-TKEG-TLKVLIYHGNRKHI---TVK-----------ELA-------KHDVVLTTYSIIEHDYRKI-LPDKLRCKWCQKAYSAQGLAKHYKYHCGPEAKKSAAQSKQKKGKKKEVKKAVNQRKGSAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KDDFSLLHSVKWVRIILDEAHTIKDRASNTAKSVFALQS-CYKWGLSGTPLQNRVGELYSLVRYLEINPY-AYFFCKK--CDCKSLEYS-----ATMCDKCEHASTLHFCWWNKFIAQPISRFGFQ--QGGGK---SMKLL-RQKLLD-EMLLR-RTKIERAAD---------LSMPPKLSFVRKVVFDAKEDDYYQSLYSQSKSVFNTYVKEGSVLNNYGHIFDLLTRLRQAVDHPYLVVH-SATGASGVSVT-------------------------------------------------------------------TPLCVICDE-DC--IDPV--------SAKCKDTFCRSCLENLLSEGSEDTK----------------------------------------------------------------------------------------------------------------IACPR--C-ETPLTVDAKSSKV----------------------------------------------------------------VGKKLTGYRKGSIINRL-D---LN---------------DFVTSTKIEALKEEVKKM----------------------------------------------------ISKDTS-----AKGLVFSQFTSMLDLIGYSFE-------LAGVKCVKLDGGMSLSQRSTAIDTFRNDPEC------------------------------------KLFLMSLKAGGVALNLTVASYIFLMDPWWNPAVEHQAQDRIHRIGQYKPIRVTRFVIENSVEERILKL-------------QEK--KQLVFE--------------------------------GTVG--GS---EQ-ALGKLTEQDLRFL-------------------------------------------------------------------------------------------------------------------------------------------FAT-------------   [869]
'gi|71018359|ref|XP 759410.1| hypothetical protein UM03263.1 [Ustilago maydis 521] >gi|46098957|gb|EAK84190.1| hypothetical prot'    --------------------------------------------------------MPPRR-----------STRQSVSATPK---VDEVIVISSEDEKVVVATPESPVLISSIQRRAASSRAASAISSLGTAPSSRTNSTYASGSHTPDTS----TAGDDDKQDGTKNDTAPDESKP--GSRTSTLRARRTSRSASIKTQ-------TKTNTSPAPITPASD--SRKRRAP------------------------------------RASAPTPSKTRKVDVDDKSLLKRASARVQAASNMVTKGWSKEDQDEGLLVTEPGPSTPSSALDRVEAGGSTSRSKGKKKAKAKAEPRPE---SIIAEESVDDFATSRSRRPPRRSAALAVK----ASKSFFD----------------------SYADDQLYLDEEAESEGKYNEDRSSFNSLSSDDEPLCSKKKWPVETGRNFA--TAEAGPSNLA------------------------TLEKS--------DFNADTATTDDDADFHPRTGNNF----YAEEVEYETAK----------------------------------------------------------------------------------------------------------------------------------------------------------QRSA----------------------------------------------------------------------------------------------------------------------------RLRS------------------------------EKHQARLKKRDAR--TQYDKNFVALVKHHRQLENVW------------------KDLERTVA-----------------------------------------VITPEEAE-----------------------------QP-PGLNIKLLPFQREGLNWMTRQEQ-------------------------------------------------------------A-TWKGGMLADEMGMGKTIQMISLMLSD--R---------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKPCLVVAPTVAIMQWRNEIEQY-TE-P-KLKVLMWHGANRTQ---DLK-----------ELK-------AADVVLTSYAVLESSFRKQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ESGFRRKN--EI--------------------------------LKERSALHAVHWRRIILDEAHNIKERSTNTAKGAFALQG-DFRWCLSGTPLQNRVGELYSMIRFLGGDPF-AYYFCKK--CTCKSLHWS--FSDKRSCDSCGHTPMHHTCFWNNEILKPIQRSGAQH-GEGRD---AFQRL--RILLE-RMMLR-RTKLERADD---------MGLPPRTIEVRRDLFNEEEEDLYTSLYTDTTRKFSTYLDQGTVLNNYSNIFTLLTRMRQLANHPDLVLR-SKTGLASK--------------------------------------L----------LGEDQSE--------------IHVCRICTD-EA--EDAI--------MSRCKHIFCRECVRQYLDSELVPG--------------------------------------------------------------------------------------------------------------MV-PDCPY--C-HATLSIDLEAEAL----------------------E-PPQS---SIRM----------------------------------NDSGRQGILSRL-D---MD---------------KWRSSTKIEALVEELTQL----------------------------------------------------RSDDKT-----IKSLVFSQFVNFLDLIAFRLQ-------RAGFQICRLEGNMSPEARNRTIKHFMENPGV------------------------------------TVFLVSLKAGGVALNLTEASRVYLMDPWWNPSVEVQAMDRIHRLGQHRPIIVKRMVIENSIESRIIEL-------------QNK--KSAMIE--------------------------------AAIG--KD---DG-AMGRLSVSDLRFL-------------------------------------------------------------------------------------------------------------------------------------------FT-L------------   [1054]
'gi|14195095|sp|P79051|RHP16 SCHPO DNA repair protein rhp16 (RAD16 homolog)'                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------MGTSCNKINSNSNKGKENMHFVLDDNGDSKGNASNQQVERDDK-------------------------------------------------------------------------------------------------------------------------------------LDMETTRWNGKEFEEPLSTNKKLIIQSNNTSSQHSTPPLSISDTSTHTGSSTDNVEANPNTGFSSARKRSLRSSNLKKKFVPLSSPEESNESEFIDDDESDEVASIIDIKEDETFDSKVEIPEAA-------------------------------------------------------------------------------PSSSTESD---EESIPLSYQSK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RRRVS--------------------------ARASSSASSSSRTQAKSIPSHERTHYRLIRQHPELEHVW------------------EKLE-EEA-----------------------------------------PREVKQIE-----------------------------QP-KELVLNLLPFQREGVYWLKRQED--------------------------------------------------------------SSFGGGILADEMGMGKTIQTIALLLSE-PR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GKPTLVVAPVVAIMQWKEEIDTH-TN-K-ALSTYLYYGQARDI---SGE-----------ELS-------SYDVVLTSYNVIESVYRKE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RSGFRRKN--GV--------------------------------VKEKSLLHQMEFYRIILDEAHGIKSRTCNTARAVCGLRT-TRKICLSGTPLQNRIGELFSLLRFLRADPF-AYYYCLQ--CECKSLHWR--FSDRSNCDECGHKPMSHTCYFNAEMLKPIQKFGYE--GPGKL---AFKKV--HSLLK-HIMLR-RTKLERADD---------LGLPPRVVEVRKDLFNEEEEDVYQSLYMDSKRKFNTYLAEGVVLNNYANIFQLITRMRQMADHPDLVLA-SKRKT----------------------------------------------------VDIENQE--------------NIVCKICDE-VA--QDAI--------ESRCHHTFCRLCVTEYINAAGDGEN----------------------------------------------------------------------------------------------------------------VNCPS--C-FIPLSIDLSAPAL----------------------EDFSEE------------------------------------------KFKNASILNRI-D---MN---------------SWRSSTKIEALVEELYLL----------------------------------------------------RKKDRT-----LKSIVFSQFTSMLDLIHWRLR-------KAGFNCVKLDGGMTPKARAATIEAFSNDINI------------------------------------TIFLVSLKAGGVALNLTEASQVFMMDPWWNGAVQWQAMDRIHRIGQKRPIKVITLCIENSIESKIIEL-------------QEK--KAQMIH--------------------------------ATID--QD---EK-ALNQLSVEDMQFL-------------------------------------------------------------------------------------------------------------------------------------------FSN-------------   [861]
'gi|3647341|emb|CAA21065.1| SPCC613.13c [Schizosaccharomyces pombe] >gi|19075201|ref|NP 587701.1| hypothetical protein SPCC613.1'    --------------------------------------------------------MHISTLKVDQLQNEAVDINSNDTIDSINWKNTRNNHTTQASLQADNNDEQSNGQAPFSTTYSEINNIHDVPGNQDEWSSSPIAGIIVESEDEEVVENNLHSQMGTSCNKINSNSNKGKENMHFVLDDNGDSKGNASNQQVERDDK-------------------------------------------------------------------------------------------------------------------------------------LDMETTRWNGKEFEEPLSTNKKLIIQSNNTSSQHSTPPLSISDTSTHTGSSTDNVEANPNTGFSSARKRSLRSSNLKKKFVPLSSPEESNESEFIDDDESDEVASIIDIKEDETFDSKVEIPEAA-------------------------------------------------------------------------------PSSSTESD---EESIPLSYQSK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RRRVS--------------------------ARASSSASSSSRTQAKSIPSHERTHYRLIRQHPELEHVW------------------EKLE-EEA-----------------------------------------PREVKQIE-----------------------------QP-KELVLNLLPFQREGVYWLKRQED--------------------------------------------------------------SSFGGGILADEMGMGKTIQTIALLLSE-PR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GKPTLVVAPVVAIMQWKEEIDTH-TN-K-ALSTYLYYGQARDI---SGE-----------ELS-------SYDVVLTSYNVIESVYRKE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RSGFRRKN--GV--------------------------------VKEKSLLHQMEFYRIILDEAHGIKSRTCNTARAVCGLRT-TRKICLSGTPLQNRIGELFSLLRFLRADPF-AYYYCLQ--CECKSLHWR--FSDRSNCDECGHKPMSHTCYFNAEMLKPIQKFGYE--GPGKL---AFKKV--HSLLK-HIMLR-RTKLERADD---------LGLPPRVVEVRKDLFNEEEEDVYQSLYMDSKRKFNTYLAEGVVLNNYANIFQLITRMRQMADHPDLVLA-SKRKT----------------------------------------------------VDIENQE--------------NIVCKICDE-VA--QDAI--------ESRCHHTFCRLCVTEYINAAGDGEN----------------------------------------------------------------------------------------------------------------VNCPS--C-FIPLSIDLSAPAL----------------------EDFSEE------------------------------------------KFKNASILNRI-D---MN---------------SWRSSTKIEALVEELYLL----------------------------------------------------RKKDRT-----LKSIVFSQFTSMLDLIHWRLR-------KAGFNCVKLDGGMTPKARAATIEAFSNDINI------------------------------------TIFLVSLKAGGVALNLTEASQVFMMDPWWNGAVQWQAMDRIHRIGQKRPIKVITLCIENSIESKIIEL-------------QEK--KAQMIH--------------------------------ATID--QD---EK-ALNQLSVEDMQFL-------------------------------------------------------------------------------------------------------------------------------------------FSN-------------   [963]
'gi|50257984|gb|EAL20678.1| hypothetical protein CNBE0430 [Cryptococcus neoformans var. neoformans B-3501A]'                         --------------------------------------------------------MPALR-----------STRKSAQNQPEMAVIDSVGDSRTNNAVSIKAQRQSTVEVSIPTRRTRSS-------------TSNTASLVPNGVDRDETEDEDWADGDVNMENGDSDIELIEDQKPQINGVNGKGKGRAKEQAQPFNIG-------KYSRVAKASVTDLKE--DTRTSGR------------------------------------SSRAPRRSKS------------QASVKIEELDG---------DSTESEFVVDGGGYAMDSE-DEARQLKQAIRASSSKAASSKGK-RTN---HVALNAALARIAGKRS---GQSSTATDTA----NATPLSD-------------------------DDPVPSDSEFEEAEEQGSDLSDLSTSDSEVEVPLSRGKGSMRGGRGGAQGSKAARPSVAKG-KTAAKGKTKKFQGKGRKLGGSDSEKEE--------EFDGAEALSDEDESLSELSDPNMS---WLEKRQMQKRK----------------------------------------------------------------------------------------------------------------------------------------------------------EKRH----------------------------------------------------------------------------------------------------------------------------AAREA--------------------------APRKKKERELAKKLGRKLTNGEKNLIALCMHRPELENVW------------------GDLQANIE-----------------------------------------PVKPITME-----------------------------AH-PSLKLTLLPFQKESLYWMKKQEE-------------------------------------------------------------G-PWKGGMLADEMGMGKTIQTIALLLSE-PR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------RKPSLVVAPVVALMQWKNEIETH-AE---GFTVCLWHGQGRMK----AA-----------ELK-------KFDVVLVSYGTLEASFRRQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QRGFKRGD--KF--------------------------------IKEKSPMHEFEWHRVVLDEAHNIKERSTNAAKAAFALKA-TYKWCLSGTPLQNRVGELYSLVRFLGADPF-SHYFCKK--CPCKRLHWQ--FSDKRHCDECGHKPMDHVCFWNTEILTPIAKYGVEEGGPGHT---AFKKL--KVLLD-RMMLR-RTKLERADD---------LGLPPRTIVVRRDYFSPQEKELYMSLFTNAKRQFATYVGQGTVLNNYSNIFSLITRMRQMACHPDLVLR-SKNSTLTD--------------------------------------V----------------QE-------------GTVCRLCND-TA--EDAI--------MSQCKHVFDRECIKQYLEVKQMRG--------------------------------------------------------------------------------------------------------------HK-PECPV--C-HIEISIDLEAEAL----------------------D-LEEN-----------------------------------------NKKARQGILSRL-N---LD---------------NWRSSSKLEALVEELEKL----------------------------------------------------RHKDCT-----IKSLVFSQFVSFLDLIAFRLQ-------RAGFNICRLEGSMTPQQRDATIQHFMKNTGV------------------------------------TVFLISLKAGGVALNLTEASMVFMMDSWWNPSVEYQAMDRIHRLGQKRPVKVVKLVIEDSIEDQIVQL-------------QAK--KLAMTE--------------------------------AALS--SDS--DS-ALGKLTVEDLGFL-------------------------------------------------------------------------------------------------------------------------------------------FK-L------------   [1045]
'gi|57226991|gb|AAW43450.1| DNA repair protein rad16, putative [Cryptococcus neoformans var. neoformans JEC21] >gi|58267202|ref|'    --------------------------------------------------------MPALR-----------STRKSAQNQPEMAVIDSVGHSRTNNAVSIKAQRQSTVEVSIPTRRTRSS-------------TSNTASLVPNGVDRDETEDEDWADGDVNMENGDSDIELIEDQKPQINGVNGKGKGRAKEQAQPFNIG-------KYSRVAKASVTDLKE--DTRTSGR------------------------------------SSRAPRRSKS------------QASVKIEELDG---------DSTESEFVVDGGGYAMDSE-DEARQLKQAIRASSSKAASSKGK-RTN---HVALNAALARIAGKRS---GQSSTATDTA----NATPLSD-------------------------DDPVPSDSEFEEAEEQGSDLSDLSTSDSEVEVPLSRGKGSMRGGRGGAQGSKAARPSVAKG-KTAAKGKTKKFQGKGRKLGGSDSEKEE--------EFDGAEALSDEDESLSELSDPNMS---WLEKRQMQKRK----------------------------------------------------------------------------------------------------------------------------------------------------------EKRH----------------------------------------------------------------------------------------------------------------------------AAREA--------------------------APRKKKERELAKKLGRKLTNGEKNLIALCMHRPELENVW------------------GDLQANIE-----------------------------------------PVKPITME-----------------------------AH-PSLKLTLLPFQKESLYWMKKQEE-------------------------------------------------------------G-PWKGGMLADEMGMGKTIQTIALLLSE-PR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------RKPSLVVAPVVALMQWKNEIETH-AE---GFTVCLWHGQGRMK----AA-----------ELK-------KFDVVLVSYGTLEASFRRQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QRGFKRGD--KF--------------------------------IKEKSPMHEFEWHRVVLDEAHNIKERSTNAAKAAFALKA-TYKWCLSGTPLQNRVGELYSLVRFLGADPF-SHYFCKK--CPCKRLHWQ--FSDKRHCDECGHKPMDHVCFWNTEILTPIAKYGVEEGGPGHT---AFKKL--KVLLD-RMMLR-RTKLERADD---------LGLPPRTIVVRRDYFSPQEKELYMSLFTNAKRQFATYVGQGTVLNNYSNIFSLITRMRQMACHPDLVLR-SKNSTLTD--------------------------------------V----------------QE-------------GTVCRLCND-TA--EDAI--------MSQCKHVFDRECIKQYLEVKQMRG--------------------------------------------------------------------------------------------------------------HK-PECPV--C-HIEISIDLEAEAL----------------------D-LEEN-----------------------------------------NKKARQGILSRL-N---LD---------------NWRSSSKLEALVEELEKL----------------------------------------------------RHKDCT-----IKSLVFSQFVSFLDLIAFRLQ-------RAGFNICRLEGSMTPQQRDATIQHFMKNTGV------------------------------------TVFLISLKAGGVALNLTEASMVFMMDSWWNPSVEYQAMDRIHRLGQKRPVKVVKLVIEDSIEDQIVQL-------------QAK--KLAMTE--------------------------------AALS--SDS--DS-ALGKLTVEDLGFL-------------------------------------------------------------------------------------------------------------------------------------------FK-L------------   [1045]
'gi|6319590|ref|NP 009672.1| Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad7p) during nucleo'    ----------------------------------------------------------MQE-------------------------------------------------------------------------------------------------------------------GGFI--------------------R-------RRRT---RST--KKSVNYNEL--SDDDTAVKNSKTLQLKGNSENV--------------NDSQDE------------------------EYRD---------DATLVK----------------SPDDDDK-------------------------DFIIDLTGSD-----KERTAT--------DENTHAI----------------------KNDNDE-----I-----------IEIKEER-----------------------------------------------------------------------------DVSDD----DEPL----------------TK----------------------------------------------------------------------------------------------------------------------------------------------------------KRKT----------------------------------------------------------------------------------------------------------------------------TAR------------------------------KKKKKTSTKKKSPK-VTPYERNTLRLYEHHPELRNVF------------------TDLK-NAP-----------------------------------------PYVPQRSK-----------------------------QP-DGMTIKLLPFQLEGLHWLISQEE-------------------------------------------------------------S-IYAGGVLADEMGMGKTIQTIALLMND-LT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------KSPSLVVAPTVALMQWKNEIEQH-TK-G-QLKIYIYHGASRTT---DIK-----------DLQ-------GYDVVLTTYAVLESVFRKQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NYGFRRKN--GL--------------------------------FKQPSVLHNIDFYRVILDEAHNIKDRQSNTARAVNNLKT-QKRWCLSGTPLQNRIGEMYSLIRFLNINPF-TKYFCTK--CDCASKDWK--FTDRMHCDHCSHVIMQHTNFFNHFMLKNIQKFGVE--GPGLE---SFNNI--QTLLK-NIMLR-RTKVERADD---------LGLPPRIVTVRRDFFNEEEKDLYRSLYTDSKRKYNSFVEEGVVLNNYANIFTLITRMRQLADHPDLVLK-RLNNF-----------------------------------------------------PGDDIG--------------VVICQLCND-EA--EEPI--------ESKCHHKFCRLCIKEYVESFMENN--------------------------------------------------------------------------------------------------------------NK-LTCPV--C-HIGLSIDLSQPAL----------------------E-VDLD---S---------------------------------------FKKQSIVSRL-N---MSG--------------KWQSSTKIEALVEELYKL----------------------------------------------------RSNKRT-----IKSIVFSQFTSMLDLVEWRLK-------RAGFQTVKLQGSMSPTQRDETIKYFMNNIQC------------------------------------EVFLVSLKAGGVALNLCEASQVFILDPWWNPSVEWQSGDRVHRIGQYRPVKITRFCIEDSIEARIIEL-------------QEK--KANMIH--------------------------------ATIN--QD---EA-AISRLTPADLQFL-------------------------------------------------------------------------------------------------------------------------------------------FN-N------------   [790]
'gi|50303981|ref|XP 451940.1| unnamed protein product [Kluyveromyces lactis] >gi|49641072|emb|CAH02333.1| unnamed protein produc'    --------------------------------------------------------MTMEE-------------------------------------------------------------------------------------------------------------------GGFI--------------------R-------RTRQSGNRTRTAKKNVVYIESSSG------------------------------------ESEDE------------------------PLVK---------KEIKSN----------------KGNAKANDKGKCKTKGTTKAN-RNL---D---------SDLEYDDS--LVLLS--------DQTDRSG----------------------DESSDELKREQV-----------VELISS--------------------------------------------------------------------------------SDD----DEPL--------QNGPQ---KK----------------------------------------------------------------------------------------------------------------------------------------------------------KRKA----------------------------------------------------------------------------------------------------------------------------NGRAG--------------------------GATATKK---KPTKPK-ISPFERNTAKLYAHHSELIDVF------------------KKLQ-ESP-----------------------------------------IRQVERAP-----------------------------QP-DGMAIRLLPFQLEGLHWLQQQEE-------------------------------------------------------------S-DYNGGVLADEMGMGKTIQTIALLMSD-IT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------RKPSLVVAPTVALMQWKNEIEQH-TN-K-KLSVYMYHGANRTN---NLG-----------DFK-------DVDVILTTYAVLESVYRKQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VYGFKRKA--GT--------------------------------VKEKSLLHSINFYRVILDEAHNIKDRTSNTAKAVNSLQT-KKRWCLSGTPLQNRIGEMYSLIRFLNIEPF-TRYYCKQ--CSCSSENWR--FSDYLHCDDCGHVGMQHTNFFNHFMLKNVQKHGIE--GPGLQ---SFQNI--QTLLA-RIMLR-RTKVERADD---------LGLPPRIVTVRKDYFNEEEKDLYQSLYSDIKRKYNSYVEEGVVLNNYANIFTLITRMRQMADHPDLVLK-RLKGN-----------------------------------------------------NDNNPG--------------VIICQLCDD-EA--EEPI--------ESKCHHRFCRLCINEYIDSFMADE--------------------------------------------------------------------------------------------------------------KK-LTCPV--C-HIGLSIDLQQQAL----------------------E-VDEE---L---------------------------------------FKKQSIVSRL-K---MGG--------------KWRSSTKIEALVEELYNL----------------------------------------------------RSDKRT-----IKSIVFSQFTSMLDLVEWRLK-------RAGFQTVKLQGSMTPTQRDQTIKYFMENIHC------------------------------------EVFLVSLKAGGVALNLCEASQVFILDPWWNPSVEWQSGDRVHRIGQFRPVKITRFCIEDSIESRIIEL-------------QEK--KASMIH--------------------------------ATIN--QD---EA-AINRLTPADLQFL-------------------------------------------------------------------------------------------------------------------------------------------FN-N------------   [800]
'gi|50554893|ref|XP 504855.1| hypothetical protein [Yarrowia lipolytica] >gi|49650725|emb|CAG77657.1| unnamed protein product [Y'    --------------------------------------------------------MT------------------------------------------------------------------------------------------------------------VSGDLSSEDGGGFVVSDASPAPEAPKKETKLPTFK-------RKPRTAATNKAQLKE--FDDEGNE------------------------------------VVQDPSKTRS------------ASSQEPAAAPK---------RRGRSRAVIDDNSEASSSS-SLATRAKVATRSRATKPKATRKR-AIV---V---------SDDSSGD-------------------------------------------------EYKASDESDREQAV----EDGGFMI--------------------------------------------------------------------------------ADDL---EEGE--------EEKPK---KR----------------------------------------------------------------------------------------------------------------------------------------------------------RAPA----------------------------------------------------------------------------------------------------------------------------KKKAK--------------------------KDDYDELDEDGNKKPRYLKYYDRTTKALFEQHPELENTF------------------IDLD-NKP-----------------------------------------RIQVEKAE-----------------------------QP-KSMAVTLLPFQQEGLNWLLKQEE-------------------------------------------------------------G-EYKGGILADEMGMGKTIQTIALIIAS--G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKPNLIVAPTVALMQWANEINDH-SA-G-SLKVAVYHGANKDS--FSVK-----------DLE-------GYDCVMTTYAVLESVYRRQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QSGFVRKGVEGK--------------------------------QYKKSPLHQVQWGRVVLDEAHNIKDRASNTARAAFNLNT-EKRLCLSGTPLQNRIGEMFSLIRFLGIKPF-CEYFCKK--CPCRSHDWS--FVNNRTCVTCGHRPMDHTNYFNHVLLKHIQKGGIS--KEGKE---SFGNI--QKLLK-HIMLR-RTKVERADD---------LGLPPRIVTIRRDFFNEEEKDLYQSIYSDVNRKFNTYVAQGVVLNNYANIFSLITRMRQIADHPDLVLR-RANQGE----------------------------------------------------GGYIDN--------------AIICQLCDD-EA--EEPI--------KSKCHHTFCRVCIKDYCS--------------------------------------------------------------------------------------------------------------------GA-SDCPV--C-HINLTIDLNAPAI----------------------E-QETN---S---------------------------------------KEKTSIVQRI-N---MTG--------------GWRSSTKIEALVEELYKL----------------------------------------------------RSDRQT-----IKSIVFSQFTSMLDLVEWRLR-------RAGFQTVKLQGNMSPTQRQNSIKYFMENPQV------------------------------------EVFLVSLKAGGVALNLCEASQVFILDPWWNPSVEWQSGDRVHRIGQHRPVKITRFAIEDSIESRIIEL-------------QEK--KASMIH--------------------------------ATLG--QD---DG-AINRLTPADMQFL-------------------------------------------------------------------------------------------------------------------------------------------FT-N------------   [844]
'gi|44982265|gb|AAS51574.1| ADL345Cp [Ashbya gossypii ATCC 10895] >gi|45187527|ref|NP 983750.1| ADL345Cp [Eremothecium gossypii]'    --------------------------------------------------------MTGEE-------------------------------------------------------------------------------------------------------------------GGFI--------------------R-------RRPRRAAARRSAVRE--EISSEDE------------------------------------PLSGQARTGS-------------AAWDPVVVES--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDG----EEPLEEES---EEDEPL---GK----------------------------------------------------------------------------------------------------------------------------------------------------------RRRA----------------------------------------------------------------------------------------------------------------------------KPRGG--------------------------KPSAKKVPAKKARAPN-VSRYDRMTQLLFEHHRELADVF------------------PALR-DAP-----------------------------------------AYKPIRAA-----------------------------QP-AGLTVPLLPFQLEGLHWMALQEN-------------------------------------------------------------NERYRGGVLADEMGMGKTVQMISLLLH--AN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGPTLVVAPTVALIQWKNEIDKY-TG-G-ALRSLVFHGPGRSA---VSE-----------ELA-------AADVVLTTYAVLESVYRKQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TQGFRRKA--GV--------------------------------VREQSPLHAVDFYRVVLDEAHNIKDRSSGTARSVNALRA-VRRWCLTGTPLQNRIGEMYSLIRFLDIEPF-TRYFCTK--CSCSEKTWR--FSDNLHCDSCDHVGMQHTNFFNHFMLKNIQRHGME--GPGLE---SFENI--QLLLR-NIMLR-RTKVERADD---------LSLPPRIVTVRRDVFDEEERDLYRSLYSDSKRQYNTYVESGVVLNNYANIFTLLTRMRQLADHPDLVLK-RLP-------------------------------------------------------GNEIVG--------------VIVCQLCVD-EA--EDAI--------ESKCRHKFCRLCIREYIDSFVGRS--------------------------------------------------------------------------------------------------------------AD-LTCPV--C-HIALSIDLAQPAL----------------------E-IDEE---M---------------------------------------FKKQSIVNRL-G---LQG--------------NWRSSTKIEALLEELYNL----------------------------------------------------RSSTRT-----IKSIVFSQFTSMLDLVEWRLK-------RAGFQTAKLQGSMTPTQRAETINYFMDNVHC------------------------------------EVFLVSLKAGGVALNLCEASQVFILDPWWNPSVEWQSGDRVHRIGQHRPVKITRFCIEDSIESRIIEL-------------QEK--KANMIH--------------------------------ATLG--QD---EG-AVNRLTPADLQFL-------------------------------------------------------------------------------------------------------------------------------------------FN-N------------   [746]
'gi|49527870|emb|CAG61521.1| unnamed protein product [Candida glabrata CBS138] >gi|50292251|ref|XP 448558.1| unnamed protein pro'    ----------------------------------------------------------MEE-------------------------------------------------------------------------------------------------------------------GGFI--------------------R-------RTRSRVGRAK--QKKVSYVEVSSSEDEQSTLTSVSGGRKDSSESTVVGSSADDPIDLDYEEEEDE------------------------EFVD---------AEEEVA----------------NHDAEDDTAAEMRTAKVKRGK-RSR---RLKPTLMVDLSKVEFDEDGHARMKK--------EEPDNAL----------------------PDVPDE---PNI-----------PEIKED--------------------------------------------------------------------------------DED----DQPL----------------SK----------------------------------------------------------------------------------------------------------------------------------------------------------KRKT----------------------------------------------------------------------------------------------------------------------------TAK------------------------------KSRKK---KEPKIK-LTPYQRTTLRLFEHHPELANVF------------------PDLQ-NAP-----------------------------------------KYEPHRAP-----------------------------QP-ADMGVKLLPFQLEGLHWMLSQED-------------------------------------------------------------S-IYNGGVLADEMGMGKTIQTIALLMND-RS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKPSLVVAPTVALMQWKNEIEQH-TN-G-ALSTYIYHGASRTI---NIH-----------DLK-------DIDVILTTYSVLESVFRKQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NYGFRRKN--GL--------------------------------VKEKSLLHNIDFYRAILDEAHNIKDRTSNTSRAVNALKT-QKRWCLSGTPLQNRIGEMYSLIRFLDINPF-AKYFCTK--CECASKEWK--FSDNMHCDSCGHVLMQHTNFFNHFMLKNIQKFGVE--GPGLE---SFNNI--QTLLK-NVMLR-RTKVERADD---------LGLPPRVVTVRKDYFSEEEKDLYRSLYTDSQRKYNSFVEKGVVLNNYANIFSLITRMRQLADHPDLVLK-RFHD-------------------------------------------------------DNAAG--------------VIVCQLCND-EA--EEPI--------ESKCHHKFCRLCIREYVESYIESS-------------------------------------------------------------------------------------------------------------GSN-LTCPV--C-HIGLSIDLSQPSL----------------------E-VDLE---S---------------------------------------FKKQSIVSRL-N---MKG--------------TWRSSTKIEALVEELYKL----------------------------------------------------RSPVKT-----VKSIVFSQFTSMLDLVEWRLK-------RAGFQTVKLQGSMSPTQRDQTIKYFMDNIEC------------------------------------EVFLVSLKAGGVALNLCEASQVFILDPWWNPSVEWQSGDRVHRIGQYRPVKITRFCIEDSIEARIIEL-------------QEK--KANMIH--------------------------------ATIN--QD---EA-AINRLTPADLQFL-------------------------------------------------------------------------------------------------------------------------------------------FN-N------------   [830]
'gi|68468819|ref|XP 721468.1| hypothetical protein CaO19 2969 [Candida albicans SC5314] >gi|68469363|ref|XP 721196.1| hypothetic'    --------------------------------------------------------MAPSR-------------------------------------------------------------------------------------------------NDVADNESSSDSDTSNIGGGFIIDDIS------------TTRT-------KRPRRAAARKAA--NISYAESSDD------------------------------------QESDSIDSDT------------FANV-PAPVKK---------RKTRT-------------------STRVQSKEKETKKKKTASK-RSS---S---------PDDEDDDQ--EFTLSLDDA----KESETTD----------------------DDEVEYLGSNQIEKNGST----SAEAIDL--------------------------------------------------------------------------------ADDLDLNNDPD--------ENVPL---AS----------------------------------------------------------------------------------------------------------------------------------------------------------RKAP----------------------------------------------------------------------------------------------------------------------------KKRAK--------------------------GGKRTK----KEPKPK-MSYYERTTNRLFEHHPSLKEVF------------------PYLK-NTP-----------------------------------------KITPERAE-----------------------------HP-PGMTIKLLPFQLEGLNWLIKQED-------------------------------------------------------------G-EFNGGILADEMGMGKTIQTIGLFMHD-RS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGPNLVIGPTVALMQWKNEIEKH-TEPG-MLKVLLYHGSNRSN---SIQ-----------ELS-------QYDVILTSYSVLESVYRKQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NYGFKRKN--GL--------------------------------VKEKSAIHNIEFYRVILDEAHNIKDRNSNTSRAAGKLNT-KKRWCLTGTPLQNRIGEMYSLIRYMKLDPF-HSYFCTK--CDCKSEDWK--FSDGRRCDLCQHPPMLHTNFFNHFMLKNIQKFGIA--GLGLE---GFNNL--RSLLD-HVMLR-RTKIERADD---------LGLPPRVVEIRRDFFNEEEKDLYQSLYSDSKRKFNDYVAEGVVLNNYANIFTLITRMRQLADHPDLVLK-RVGSNA---------------------------------------------------ISNEIDG--------------VIMCQLCDD-EA--EEPI--------ESKCHHRFCRMCIQEYMESFMGAS--------------------------------------------------------------------------------------------------------------NK-LECPV--C-HIGLSIDLEQPAI----------------------E-VDEE---L---------------------------------------FTKASIVNRI-KSGAHGG--------------EWRSSTKIEALVEELYKL----------------------------------------------------RSDRHT-----IKSIVFSQFTSMLDLIQWRLK-------RAGFNTVKLSGSMSPQQRDNTIKHFMENTEV------------------------------------EVFLVSLKAGGVALNLCEASQVFLMDPWWNPSVEWQSMDRVHRIGQKRPIRITRFCIEDSIESKIIEL-------------QEK--KANMIH--------------------------------ATIN--ND---DA-AISRLTPDDLQFL-------------------------------------------------------------------------------------------------------------------------------------------FM-N------------   [852]
'gi|71659675|ref|XP 821558.1| DNA repair protein [Trypanosoma cruzi strain CL Brener] >gi|70886941|gb|EAN99707.1| DNA repair pro'    --------------------------------------------------------M-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNNINNAVLTITDRGQWKPAKGNDRVLRYIVQRAPTMRARCRKCSQYIVKGELKWGIPIRHTHGEY----------------------GWITAWQHIGCTRI--SQIDEAINMIFGFEKLSSEEQNEVLK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EVTSSSLPFHL------------------LPLDPDDL---------------------------------------VKRGSLPEME-----------------------------PS-SELLRPLLRYQKEGLSWMVAQER--------------------------------------------------------------SCIGGGILADEMGMGKTIQMISLLLANRV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGPTLIVCPVSSMLQWKAEIKEH-VVPG-TLSIIVVDRAIHVK----KD-----------EME-------NADVVLTTYPMMEQSWRTVVNKTKVSCPYCEQLFLPRQLVVHNRYFCGPKARKTAKQRKREKGREDVNVVKNRRVQSKETIKKGLRTLRVDVDDTVDEGVFVSENE------------------------------------------------------------------------------------NKNERGTVGPMGMYRELMLEAGRTVRSRWEPAKELSDGTDSTSISVNINTESDETNEEEIHRD---------------EEAFIAFQCPNCKFQLLRYPFCPKTGQHHVLSEGLKNIIETDNGGDDI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DIFESIFHSIKWSRIVLDEAHRIKGRNTSTSRAAFALQG-EYRWCLTGTPLQNRVGDVYSLIRFLRMTPF-ARYYCGTEGCSCSSFSHPFSGTNLRQCIFCGHGPVQHYAYFNRYIMNPILRYGYV--GDGRQ---GMMML-ANEVLQ-KCMLR-RTKIERASD---------LHLPPLTIEIIKVKLTKEERNFYDSLYKKSAAAFDTFVDKGTVLHNYAHIFQLLSRLRQSLDHPLLVVE-SMNVGRVAHL--------------------------------------------------------------------KGVCGICTE-GG-NENSLQ-------VNPCRHTFHRVCLAQFIESLPGNE-----------------------------------------------------------------------------------------------------------------YRCPT--C-FVTINIDLRQLRSELEEEEP------APIMPPEIED-------------ELIEEEQAGKLFCDGGTPMGISSTSEKV--VSTQNKRKKDILSRID----FS---------------NPLQGSKLDAIAEYILSV----------------------------------------------------PKD--------EKIIIFSQFGDMLELIQIWLQ-------RASVKAVKLTGSLMLSQRQAVLQAFLHDPGV------------------------------------RAILISLKAGGEGLNLQVANHVILVDPWWNPAVEMQAAQRAHRIGQTKPVRVVRFVVERSVEERMMDL-------------QDK--KMLVIE--------------------------------GTID--G----KFSSLQSLSEDDLQFL-------------------------------------------------------------------------------------------------------------------------------------------FTR-------------   [983]
'gi|68126895|emb|CAJ04924.1| DNA repair protein, putative [Leishmania major]'                                    --------------------------------------------------------M-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNFAKHPDLTLNERLVWRPAKGKEHVYNYIVQKSPTARARCRKCSQLIPKGEMRVGVPIRHNAGDN----------------------GWISAWQHLGCTRMERSESEDYKNTMHGFAALQPEEQAHVVN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EVHSTEMPEHL------------------KPLDPEDL---------------------------------------VHRGKMEQMA-----------------------------PP-STLLRHLLPYQKEGMGWMVRQEV-------------------------------------------------------------ESPVKGGILADEMGMGKTIQTVGMMLAHRI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------NGPTLVVCPVSSMLQWEAEIKEH-VVPG-SLSVVVVYRTTKVT----KE-----------ELE-------SADVVLTTYPMLEQAWRALISEIKVPCPYCELLFIPRQLVVHNKYFCGPRAKKTQKQAKREKHTTPAAASSSRSVQCAETIRKGLRTLHVDMGDEEDAEKEVNAPNATTAQPQRKRGRKGAVNIEGDPGGKVNGCGTPTAKKGKQEEWGSKVANGCRSSPEKANRKCPVKAEDHNDEGAALAQKGKVLQPAAASRGVVGPIGMYQELMREAGRTVLSRWDAARKDDESSSDEEVE-DESSEESDSDASNLSYNSAAAAAEEAAAAEQASKALEAFRCAACHFQLLRYPFCPRNGQHHVVREELRDIIERDTGGDDV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLDASIFHSIKWARVILDEAHRIKGRTTSTARSAFALAA-EYRWCLTGTPLQNRVGDLYSLLRFLRMRPY-AHYYCETEGCSCASLSHPFSSTSLHQCVFCGHGPLQHHSYFNRYILNPINRYGYI--GDGRR---GMMML-SNDVFS-RAMLR-RTKVERAAD---------LQLPSLTIQVHCIKLTKEERNFYESLYKKSTAEFDTFVHKGTVLHNYAHIFQLLSRLRQALDNPLLVME-GMDVGPVVNV--------------------------------------------------------------------KGVCGICGD-GIEGESALK-------VHPCRHQFHRLCLGQFLESAPDKE-----------------------------------------------------------------------------------------------------------------LHCPT--C-FVRINVDLRQLRQDAEGDDDEGVGGFAAALPPELEDEVNSE------ISEDDEQTQALQHVES--------KVKRRTAHARPTKKEQRGIFARLD----PQ---------------KPLHGTKLDAIANYIEEV----------------------------------------------------PKD--------EKVVVFSQFGSMLDLTQYWLQ-------RRSIRAVKLCGSLTLTQRQSVLQAFLHDQNV------------------------------------RVILISLKAGGEGLNLQVANHVVLTDPWWNPAVEMQAVQRAHRIGQTRPVHAVRFVTEHSVEERMVDL-------------QDK--KMLVFE--------------------------------GTID--G----KLQSLNKLTEEDLQFL-------------------------------------------------------------------------------------------------------------------------------------------FTR-------------   [1092]
'gi|16944468|emb|CAC18166.2| probable nucleotide exsicion repair protein RAD16 [Neurospora crassa] >gi|85102654|ref|XP 961377.1|'    --------------------------------------------------------MVRTRRS-----------------------------------------------------------------------VVAADEVVVAAPIAEIKKPRGRP--RKSATPAVSATASSVPTPATYTSGSEYAT---PLTSHAATPTPSLLKENVRSTRSTQSAPKIEVAIPVLKASH-------------------------------------------------------------TMQTTLRSSASATT----SKRKRNMVADSQEDDS---DDGHDAKLARMLQDEEDAKVASSSKTP---SFRVDHLGSTP-RSTRSSHRGNTNVSSSK----TKKEVIA----------------------DSEDDGFDDSPDATLARKLQAEEYGEEDSEVEAATSNVKALGLRRSSRRLNSSPVRASSNVTGK-STAVAKGNQSAPTRNSTRRGVAESSTQVLGFRTAKDLI---ADSQDDDDDFDSLSAFES---DDNDSDVSAQG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GRPSAAQKGKGKAIAPPPESEDENDSDDSVLSLPDEADEMS-VLGTGSYVSIDED----------------PDFLLPPN---LQASVHGSDDDEDATLGAHIAEAGEGLDR--------------------------IRAQMSNRRAYRSYRSN-RRVKKDRLRLEKQHPELTTMW------------------KDLE-NMP-----------------------------------------VLKAGRAE-----------------------------QP-KSISRQLKPFQLEGLAWMTAMEK-------------------------------------------------------------T-EWKGGLLGDEMGLGKTIQAVSLIMSDYPA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKPSLVLVPPVALMQWMTEIESY-TD-G-TLKTLVVHGTNSKSKNLTVK-----------NIK-------SYDVIIMSYNSLESMYRKQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKGFKRKE--GL--------------------------------YKEKSVVHQTEWHRVILDEAHSIKSRTTMTAKACFALKV-TYRWCLSGTPLQNRIGEFFSLIRFLNIRPF-TCYLCRG--CPCKTLEWG--MDDDNRCKHCNHSAMQHVSVFNQELLNPIQKFGNR--GEGAL---AFKKL--RILTD-RIMLR-RLKKDHTNA---------MELPVKEINVERQFFGEVENDFANSIMTSGQRKFDTYVATGVLLNNYANIFGLIMQMRQVADHPDLILK-KNGEGG--------------------------------------------------------QN--------------VLVCCICDE-PA--EDAI--------RSRCKHDFCRVCVKTYVHSATD-------------------------------------------------------------------------------------------------------------------PNCPS--C-HIPLSIDLEQPEL----------------------E-QDEA---Q---------------------------------------VKKSSIINRI-K---ME---------------NWTSSSKIELLVHELHKL----------------------------------------------------RSDNAS-----HKSIIFSQFTTMLQLIEWRLR-------RAGITTVMLDGSMTPAQRQASINHFMTNVDV------------------------------------ECFLVSLKAGGVALNLTEASRVFIVDPWWNPAAEWQSADRCHRIGQSRPCTITRLCIEDSVESRMVLL-------------QEK--KTNMIN--------------------------------STIN--AD---DA-AMDSLSPEDLQFL-------------------------------------------------------------------------------------------------------------------------------------------FRGN------------   [1079]
'gi|71754507|ref|XP 828168.1| DNA repair protein [Trypanosoma brucei TREU927] >gi|70833554|gb|EAN79056.1| DNA repair protein, pu'    --------------------------------------------------------M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSKHSAVLTITEKGDWRTAKNGEKVWRYMVQTAPTMRARCRKCSQPILKGDLKWGTPIRHSHGAY----------------------GWITAWHHVGCTRI--AERKGFSDIVHGIDLLPPEKRAQVVA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EVTSDSMPEHL------------------LPLNPDDL---------------------------------------VKKPLLPETE-----------------------------AP-AELLRPLLRYQKEGLGWMVSQEL--------------------------------------------------------------SQVKGGILADEMGMGKTIQMISLFLARRL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------VGPTLVVCPVSSMLQWESEVKDH-VVSG-SLSVVVVSRTKNVR----RD-----------DIQ-------NADVVLTTYPMLEQSWRELVNKKRVPCPYCQQLYLPRQLVVHNRYFCGPHAKKTSKQAKREKRQGGTGSSPTRKVQAKETIMKGLRTLRVDVDDNAEEGED--------------------------------------------------------------------------------------SVFEEGPRGVVGPMGLYRELMVEAGRKVRSRWDPAYVGSDSSGDTNNSTTESSTSSERDDSE----------EVLSKEEVADDKLSSFRCLHCGFQLLRYPFCPKIGQCHVLSDYMKQIIETDDGSDGV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLSQSVFHSVTWSRIVLDEAHRIKGSNTSTSRAAFALVG-EHRWCLTGTPLQNRVGDVYSLVRFLRLAPY-ARYYCGTEGCSCSSFSHPFSGNDLRHCIFCGHGPVQHYAYFNRHILNPIIRYGYV--GDGRR---GMMML-SNEILQ-KCMLR-RTKAERASD---------LHLPPMTVETFQVKLTDEERSFYESLYKKSTAAFDTFVEKGTVLHNYAHIFQLLSRLRQALDHPLIVIN-SMNVGGSSCS--------------------------------------------------------------------KGMCGICTE-SC-GENSVQ-------VDPCKHTFHRICLSQFVESQPLKE-----------------------------------------------------------------------------------------------------------------YNCPV--C-YVAINIDLRSLHSGWDEDGA------QPVLPPELVHSDNES------DENNVEEESKGRKLDD--------SAEGKS--ARARSVKKRGILSRID----SS---------------KPLRGTKLDAITEYICSI----------------------------------------------------PEE--------EKVIVFSQFGDTLDLIQLWLQ-------KVKVKTVKLVGSLMLSQRQAVLRAFLHDKSV------------------------------------RAILISLKAGGEGLNLQIANHVVLVDPWWNPAVEMQAAQRAHRIGQTRPVRVVRFVTERSVEERMLEL-------------QEK--KMLVIE--------------------------------GTID--G----KVSSLQSLSEDDLQFL-------------------------------------------------------------------------------------------------------------------------------------------FTR-------------   [984]
'gi|39978259|ref|XP 370517.1| hypothetical protein MG07014.4 [Magnaporthe grisea 70-15]'                                    --------------------------------------------------------MTRRTRS-----------------------------------SLARAGKVLADDDVDILAEEASASKASLGGKLKRD-------------------------RPSTSSSKTPSVASASTGGSASTSASGYST---PMTSAVATPL-------PTIAVNQTSGSRLEINIPLQPPAD--------------------------------------------------------------SKKVLRKSVYSLN--GASKRKWNEVDDSDEELS---DSSPDAVLARRLQKAEETDFTGS-------------------SSAKQAMYSGTSSTRRSTRSLKQRPVVH----------------------DLDSEDDVLTAS---------------------------------------------------------IKSKFKSKRQATPAKFVADSEDGS-------AFSSAPDANDSDQADNIAVNGSSD---EFDDEVQTTKP-----------------------------------------------------------------------------------------------------------------------------------------------------------RKQAHRVDRRASQPIPKRRKIVPRATLVLDSESESSAPPSEWTDSDDD-----------------------------------------------------------------------EGLGDAPSETPRA--------------------------VTRVRRGRTSTTRVGGHMTREERDRAKLEKNHPYLKTLW------------------ADFE-AKA-----------------------------------------VVDPPPAS-----------------------------QP-TNISRNLKPFQLQGLAWMKAMEQ-------------------------------------------------------------T-EWKGGLLGDEMGLGKTIQAVSLVMSDWPA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKPSLVLAPPVALMQWMSEIQSY-TE-G-TLKTIVYHGSNAKTKKMTKA-----------ELK-------GYDVIIMSYNSLQSMYAKQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKGVSKKD--GI--------------------------------YKEKSLLHSIDFHRVILDEAHYIKSRTTMTSKACLALKT-TYRWCLTGTPLQNRIGEFFSLVRFLKIEPF-ANYLCRD--CDCSALDWC--LNDKYQCKKCGHGGLRHVSVFNQELLNPIQTYGRT--LKGAE---AFRKL--RLLTS-KIMLR-RQKKDHMDS---------MELPLKEIIIDRQFFGEVEKDLAGSIMHNNQRKFDTYVAQGVVLNNYANIFGLLSQMRQVADHPDLILK-KNNEPG--------------------------------------------------------VN--------------IMVCCICDD-TA--EDAI--------KSQCKHEFCRACASSYVNSTPQ-------------------------------------------------------------------------------------------------------------------PTCPR--C-HIVLSIDLEQPEI----------------------E-QDQE---M---------------------------------------TKKNSIINRI-R---ME---------------NWTSSTKMEMLVHSLQKL----------------------------------------------------RSDNSS-----HKSIIFSQFTGMLQLIEWRLR-------RAGITTVMLDGSMTPAQRAASIDHFMNNVDV------------------------------------ECFLVSLKAGGVALNLTEASRVFIVDPWWNPAAEWQSADRVHRIGQTRPVVITRLCIEDSIESRIVEL-------------QEK--KTKMIN--------------------------------STVN--SD---DV-ALDSLEPEDLQFL-------------------------------------------------------------------------------------------------------------------------------------------FRGN------------   [986]
'gi|88178427|gb|EAQ85895.1| hypothetical protein CHGG 07148 [Chaetomium globosum CBS 148.51]'                                    --------------------------------------------------------MVRTRRS------------------------------------------------------------------------AAADAIAVAPPQLNTISSEKRPEERRSAS-SVASDSFTISTSATPSFGSGYTT---PLTSTSEMAT---LKEAVQPVSGKRVNNRIEVHLSATRPSS-------------------------------------------------------------F--ASLRQSIFSMG----SKRKRDTAEDSEEEFS---DSSPDAILARKLQAEEDATAATVFK-P---SPEV-RLGPTPGPAPRRSRRG--VAAPAA----TRAAVSM----------------------DPAHNGI-------------------RPTSLAPQRVNGTGSGRAASKRRAVTVP---DSGGDDR-TRPAPEGDELASLSAATDSDTPDYSAEALAWWSDSDLSDVEYETEDDDDD--------A---GDGGQDLNGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AEDESANAGH----SPPLSALD---------------------------------------------------------------------------------------------------------------------MAMRSRRAYRAYVSR-RRVKNNRSRLESNHPELKTMW------------------KELE-DMP-----------------------------------------ILKAGKAK-----------------------------QP-ESISRQLKPFQLEGLAWMMAMEK-------------------------------------------------------------T-EWKGGLLGDEMGLGKTIQAVSLIMSDFPA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKPSLVLVPPVALMQWMTEIESY-TD-G-TLKTLVFHGTNAKSKNLTVK-----------DVK-------KYDVVIMSYNSLESMYRKQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKGFKRKA--GM--------------------------------FKEKSIIHQTDFHRVILDEAHCIKTRTTMTAKACFALKV-TYRWCLSGTPLQNRIGEFFSLIRFLNVRPF-ACYLCKS--CPCSTLEWQ--MDDDRKCTACGHGGMQHVSVFNQELLNPIQKFGNR--AGGAE---AFRKL--RILTD-RIMLR-RLKIDHTDS---------MELPVKEINVERQFFGEEENDFANSIMTSGQRKFDTYVASGVLLNNYANIFGLIMQMRQVADHPDLILK-KDSEGG--------------------------------------------------------QN--------------VLVCNICDE-PA--EDAI--------RSQCKHDFCRTCVKSYVNSTTS-------------------------------------------------------------------------------------------------------------------PNCPQ--C-HIPLSIDLEQPEM----------------------E-QDEA---Q---------------------------------------VKKSSIINRI-K---ME---------------NWTSSSKIELLVHELHKL----------------------------------------------------RSDNAS-----HKSIIFSQFTTMLQLIEWRLH-------RAGITTVMLDGSMTPAQRQASIQHFMTNVNV------------------------------------EVFLVSLKAGGVALNLTEASRVFIVDPWWNPAAEWQSADRCHRIGQTRPCTITRLCIEDSVESRMVLL-------------QEK--KTNMIN--------------------------------STIN--AD---DA-AMDSLSPQDLQFL-------------------------------------------------------------------------------------------------------------------------------------------FRGN------------   [969]
'gi|46123053|ref|XP 386080.1| hypothetical protein FG05904.1 [Gibberella zeae PH-1] >gi|42552706|gb|EAA75549.1| hypothetical pro'    --------------------------------------------------------MARGRPSTRGAPKDSSTTDVSREPSVASGRMTRSAVTKSQ--------VTSSASTPAPSTEVQGAPGPRPRGRPRKS-VASVDESPTAQSPAPSAVPARRRGRPSKALVAESESGSSVPTPKDLDSESDYST---PASSKVPTP-------------AAGGNVKIEVVVPGPSTSA---------------------------------------------------------SLATDREWELRNSAYSMTRGKGKSRMIADSEDD----DDDLDNSRDAQVARRLQNEEFKQLPTIPTRPIRQSVRSSLSTTTPAQTSVKRERALTDTTAKRGRPQKKQRVIP----------------------DSDDQDIDMDAEIAAAAALDSEELS---------------------------------------------------------------------------SLSSHADEEFSEGDDSEGDGDEYA---SSGDEPLRSRK------------------------------------------------------------------------------------------------------------------------------------------------------------------------SRGKLPARAIASTASLGNGIATTAPPSDM------TTALHNGPSGDELD-ALENALGVVGSSD----------------YDNITSAI---DTGTSDTDGD--------------VARAN--------------------------VAAISRSRRGFNSFAGRSKRHIRERERLEKNHPEIKTMW------------------QDLE-DRP-----------------------------------------VLKAGKAA-----------------------------QP-QNISRQLKPFQLEGLAWMTEMER-------------------------------------------------------------G-EWKGGLLGDEMGLGKTIQAVSLIMSDYPA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLPSLVLVPPVALMQWQSEIKSY-TD-G-TLKTFVYHGTNQKTKGITVS-----------QLK-------KFDVIMMSYNSLESIYRKQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKGFKRKD--GI--------------------------------YKEKSVIHAINFHRVILDEAHCIKTRTTMTAKACFALKT-TFRWCLTGTPLQNRIGEFFSLVRFLNIAPF-ASYLCKM--CPCSMLEWS--MDEHSRCSGCKHAGMQHVSVFNQELLNPIQKYGNR--GPGKT---ALGRL--RLMTD-RIMLR-RLKKDHTNS---------MELPVKEIYVDRQFFGEVENDFANSIMTNGQRKFDTYVAQGVLLNNYANIFGLIMQMRQVADHPDLLLK-KNAEGG--------------------------------------------------------QN--------------ILVCCICDE-PA--EDTV--------RSRCKHDFCRACVGSYVRSTDE-------------------------------------------------------------------------------------------------------------------PDCPR--C-HIPLSIDLEQPEI----------------------E-QDEN---L---------------------------------------VKKNSIINRI-K---ME---------------NWTSSSKIELLVHELHKL----------------------------------------------------RSDNAS-----HKSIIFSQFTTMLQLIEWRLR-------RAGITTVMLDGSMTPAQRQASIEHFMNNVDV------------------------------------ECFLVSLKAGGVALNLTEASRVFIVDPWWNPAAEWQSADRCHRIGQTRPCTITRLCIEDSVESRMVLI-------------QEK--KTNMIH--------------------------------STVN--AD---DK-AMESLTPADMQFL-------------------------------------------------------------------------------------------------------------------------------------------FRGS------------   [1063]
'gi|83770096|dbj|BAE60231.1| unnamed protein product [Aspergillus oryzae]'                                    --------------------------------------------------------MSI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NVQKGSKRDFATIAA---DNPPTESSEAALAQALQLQEYQESSPKRR-----KARNGVSFA------------------------LEDSTDN----------------------DSVLTGLRSN------EGKDTGVKT--------------------------------------------RKRCPARKTRNSVRGMVSDSESST-------NLEDESWDEQEYISESDS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSSALRERKKLERQHPYIMKMW------------------DELR-NNP-----------------------------------------PIIPVAAE-----------------------------QP-PGISRNLKSFQLEGLNWMTRQEG-------------------------------------------------------------S-QYKGGLLGDEMGMGKTIQAVSLLMSDYPV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GQPSLVVVPPVALMQWQSEIKEY-TN-G-QLKVLVYHNSNSKVKSLSEK-----------DLL-------TYDVIMISYSGLESIHRKE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WKGWNRGD--GI--------------------------------VKADSIIHSIHYHRLILDEAHSIKQRTTSVARACFALKA-KYKWCLSGTPVQNRIGEFFSLLRFLEIRPF-ACYFCKQ--CNCQELHWS--QDEGKRCTHCKHSGFSHVSIFNQEILNPITERNNP--EARTE---ALSKL--RLITD-RIMLR-RIKRDHTAS---------MELPPKRVVLHNEFFGEIERDFSRSIMTNSTRQFDTYVSRGVMLNNYANIFGLIMQMRQVANHPDLILK-KHAQSG--------------------------------------------------------QN--------------VLVCSICDE-PA--EEAI--------RSRCHHEFCRRCAKDYVQSFNTG---------------------------------------------------------------------------------------------------------------TV-IDCPR--C-HIPLSIDFEQPDI----------------------E-QEEE---H---------------------------------------IKKNSIINRI-R---ME---------------NWTSSTKIEMLVYELYKL----------------------------------------------------RSKKQT-----HKSIVFSQFTSMLQLVEWRLR-------RAGFNTVMLDGTMTPAQRQKSIDFFMNNVDV------------------------------------EVFLVSLKAGGVALNLTEASRVFIVDPWWNPAAEWQSADRCHRIGQRRPCVITRLCIEDSVESRIVLL-------------QEK--KANLIN--------------------------------GTIN--KD---QGEALEKLTPEDMQFL-------------------------------------------------------------------------------------------------------------------------------------------FRGS------------   [777]
'gi|66356890|ref|XP 625623.1| Swi2/Snf2 ATpase,Rad16 ortholog [Cryptosporidium parvum Iowa II] >gi|46226722|gb|EAK87701.1| Swi2/'    --------------------------------------------------------M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADPDLGEMLSSRKPIVLLNNAYWEPKVKEWVPNLKIDELDEDQKSIIEQKLFVAVLTPSNISRCAVCGKTITKGTYRLGVPEYDRRGMY----------------------GIINRWNHINPCSQKYLKKAIQGHEFNLDEI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERRISEVTYGWSCLPIGIRDEFLDLCTKEIITNPNEF-------------------------------TIENSDDLISRSIVEVKP-----------------------------TP-IKLTYELLQFQKEGLAWLCNQEK--------------------------------------------------------------STARGGILADEMGMGKTIQTISLILEHDI----------------------------------------------------------------------------------------------------------------------------------------------------------------PPVTNKAEKGEVIGKNLVIAPVAAVLQWKQEIERF-TKPG-SLKVHIYHGSKRNK---NQGNKGTKQDYGGVDID-------DADVVITTYPTLEAEYRKIASAFKSKCPYCDRSFLKRTLKIHLRYFCGPNSMRTAKQALTERKNEGLKKAMRTLKIGLEEGVDKAKQLEDIARSLPTISNVYREILAKADLLDDESLSSALPWFTSRRKSQQLVKKEDSSNSLKENDTEEKIQKTEIVKDEPEENLLSLLEWGGIKLPLKSETVKSIKEFLSSIENSKEYLSTRFNIDGQILDSLVELYDNCKSLRKAELVDKLSNILGLDNPDNNSNE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GNHLNQNTKKTSKSTHNSNKKANTKSNNSKNSRKKKKYEDEFEDDYNAEEESIDEYSEYDESDDSQDLNIKRRKNAKNQKKKQNDDDDDDEYKVVEEIDEIDDEEDDNEEDEIIQKLREYSAIFGRSWNRIILDEAHRIKARTTSTAKAIFALKSRGTKWCLTGTPLQNRVGELYSLVRFIGFHPY-AYNFCNKVDCDCRQLNY---VTHLKYCSFCGHARSCHYSYFNKLIINPIKRYGFS--GEGSE---ALRRL-KKEVLD-KVLLR-RTKVQRQED---------VRLPPLEIKVINNELSAPEKDFYTSLYQRSKVQFDTYVNQGTVLHNYAHVFDLISRLRQAVDHPYLIVY-GKFNHKKDLEYKKEYKEEDNDEEKDVECLNDAEEEKTNFDSKK--------------VIPSKSR----------ADSNEDLCYICMD-NVTIDQRV--------TSKCKHGFHIKCIKEYIEQAPQEDEIITDFDTEGEQTMRGV------------------------------------------------------------------------------------------------LGCPV--C-YVPLTIDFNKVSNLNKKNKKIKSGYDEMNDEENDTNDNMESEQMQEQIERELERMEMAKQLGIDVSKENLKQEPKQENEDILSCVRNKFITRQIK----TQ---------------GFESSTKIDTLLEEVNKM----------------------------------------------------MQEDPE-----SKGIVFSQFTNMLDLVSYRLK-------KANIGCVMLAGSMSILQRNSILYSFNKFPDL------------------------------------KIILISLKAGGEGLNLQVANYVFLLDPWWNPAVELQAFQRAHRIGQKKKVTALRFITKDTIEERMFQL-------------QEK--KQLVFD--------------------------------GTVG--A----SNNALNKLNSDDLKFL-------------------------------------------------------------------------------------------------------------------------------------------FQN-------------   [1278]
'gi|15242960|ref|NP 197667.1| RAD5; ATP binding / ATP-dependent helicase/ DNA binding / helicase/ nucleic acid binding / protein'    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGTKVSDDLVSTVRSVVGSDYSDMDIIRALHMANHDPTAAINIIF-----------------------------------------------------------------------------------------------------------------------------------------------------------------------DTPSFAKPDVATPTPSGSNGGKRVDSGLKGCTFGDSGSVGANHRVEEENESVNGGGEESVSG----NEWWFVGCSEL------------------------------------------AGLSTCKG-RKLKSGDELVFTFPHSK-------------------------------GLKPETTPGKRGFGRGRPALRGASDIVRFSTKD-SGEIGRI----PNEWARCLLPLVRDKKIRIEGSCKSAPEALSIMDTILLSVSVYINSS--------------MFQKH-SATSFKTAS-NTAEESMFHPLPNLFRLLGLIPFKK----------------AEFTPEDF---YSKKRPLSS---KDGSAIP-TSLLQLNKV--------------------------KNMNQD-ANGDENEQ-------------CISDGDLDNIV------------------GVGDSS---------------------------------------------GLKEME-----------------------------TP-HTLLCELRPYQKQALHWMTQLEKGNCTDEAATMLHPCWEAYCLAD-----------------KRELVVYLNSFTGDATIHFPSTLQMARGGILADAMGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLT--------SPPVKATKFLG------------------------------------------------------------------------------------------------------------------FDKRLLEQKSVLQNGGNLIVCPMTLLGQWKTEIEMH-AKPG-SLSVYVHYGQSRPK---DAK-----------LLS-------QSDVVITTYGVLTSEFSQEN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SADHEGIYAVRWFRIVLDEAHTIKNSKSQISLAAAALVA-DRRWCLTGTPIQNNLEDLYSLLRFLRIEPW-GTW-----------------------------------AWWNKLVQKPFEE------GD-ER---GLKLV--QSILK-PIMLR-RTKSSTDRE-GR----PILVLPPADARVIYCELSESERDFYDALFKRSKVKFDQFVEQGKVLHNYASILELLLRLRQCCDHPFLVMS-RGDTAEYS----------------DLNKLSKRFLSGKSSGLEREGKDVPSEA-----FVQEVVEEL--------RKGEQGECPICLE-AL--EDAV--------LTPCAHRLCRECLLASWRNSTS-------------------------------------------------------------------------------------------------------------------GLCPV--C-RNTVSKQELITA--------------------------------------------------------------------------PTESRFQVD------------------VEKNWVESSKITALLEELEGL----------------------------------------------------RSSG-------SKSILFSQWTAFLDLLQIPLS-------RNNFSFVRLDGTLSQQQREKVLKEFSEDGSI------------------------------------LVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKEVKIRRFIVKGTVEERMEAV-------------QAR--KQRMIS--------------------------------GALT--------DQEVRSARIEELKML-------------------------------------------------------------------------------------------------------------------------------------------FT--------------   [1029]
lcl|Ppa_CHR37_212_1_unnamed_protein_product                                    --------------------------------------------------------M----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGLV----------------NGMRVAAT---IDHRLALAMDPVKR----------------------------------------------------------------------SEELAIQAVV------------------QAFSL--------------------------------------------GDEKEELT-----------------------------PDEDLLTMTLLKHQRIALAWMVNRES------------------------------------------------------------GRHEPCGGILADDQGLGKTISTISLILKNRAPILKSGSTSAQSVQLEGSTVDLDAYEDDED-------------------QLLLKKE---FENGQWPASALIENG-------NQLQQDEPKS------------------------------------------------------------------------SQPSSKGRPAAGTLVVCPTSVLRQWAQEIRDKVSIKA-DVSVLVYHGSNRIK---DPH-----------EIA-------KFDVVLSTYSIVSMEVPKQALPEEKEVDNRRSAFDYG-ISQFTK-PKKDKPE----KVKKAKAKGKGAGADGD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSDSGPLARVAWFRVVLDEAQSIKNYRTQVARAVWGLRA-KRRWCLSGTPIQNSVDDLFSYFRFLRYSPWGDVY-----------------------------------KKFQRDIKDPVGR-------NPTE---GYKKL--QAILK-PIVLR-RTKTSFLD--GK----PIVNLPQRIVKLQQTEFSLNERSFYSNLETESRAQFQMYAAAGTVQNNYVNILWMLLRLRQACDHPMLVKKCAKSEALQKTTLEAVRKLPPH-------------------------------------QRAALIQCL---------EGGRAICYICQD-AP--EDPV--------VSICAHVFCRQCVSEQMNGDDT--------------------------------------------------------------------------------------------------------------------TCRFPKC-KKSLNVSLLYTLSALK------DS--GVCEESSSL----------------------------------------------------------------IKEEKSSE-PAITELDQSWKTSSKIDAMMNTLQALPKVIV--LVEDGKIVKGPKAETLLKAEAVEIDQGETLSSGLPVVSETTVSKIDKVEST-----EKAIVFSQWTSMLDLLETPLK-------KSGLCYRRLDGTMSVVARDRAVSDFNTLPEV------------------------------------TVMIMSLKAASLGLNMVAANHVLLLDVWWNPTTEDQAIDRAHRIGQTRTVNVSRFTIKNTIEDRILALQRV-------NIMQER--KRQIVA--------------------------------SAFG--ENS--GGEQKNRLTVEDLRYL-------------------------------------------------------------------------------------------------------------------------------------------FRV-------------   [834]
'gi|45935136|gb|AAS79594.1| putative DNA repair protein [Ipomoea trifida]'                                    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGNKVPEELVSTVRSIVGDEYTEMDIIRALHMANNDATAAINIIF------------------------------------------------------------------------------------------------------------------------------------------------------------DTPGFKKLEFRKTPEVPNLNSSSGTQSLGSTTRRSSSEDKKCERSTNSDNGSQQKT--ENRESNNGCRSDADGCEMESEWWFVGTSEV------------------------------------------SGLSTCKG-RSLKPGDEVYFTFPAEK-------------------------------KL---NSPSLGKFGRGRQVV-ACSEIVRFSSKA-LGEIGRI----PNEWARCLLPLVREKKVRVEGYCKSAPNVLGIMDTIDLSVSVYINSS--------------MFRKS-HKTLLKVASNNSTDESIVYPLPTLFRLLRLTPFQK----------------AEFTPGDL---YMRKRRLTE---ENSSGIH-TPSLHANKF--------------------------KKLVTN-EGEADDDE-------------SISDTDLENIV------------------GFADNS---------------------------------------------KLEEME-----------------------------PP-STLQCELRSYQKQALHWMTQLEQVHSVNDAKTTLHPCWEAYRLAD-----------------KRDLVIYLNAFSGDATTEFPSTLQMARGGILADSMGLGKTIMTIALLLSCTERGGSPG------SQSTSLPSHENGNTIDISDQSPTPSKKAARFPG------------------------------------------------------------------------------------------------------------------LEK-FLKQKPTLKSGGNLIVCPMTLLGQWKAEIEMH-ACPG-TLSLYLHYGQSRSK---DPK-----------FIA-------QSDVVLTTYGVLASEFSSEN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AEENGGLFSVRWFRVVLDEAHTIKSSKSQISIAASALIA-ERRWCLTGTPIQNNIEDVYSLLRFLRIEPW-GSW-----------------------------------AWWNELVQKPFEE------GD-ER---GLRLV--QSILR-PIMLR-RTKSSTDRE-GR----PILVLPPADIQVIYCELTEAEKDFYEALFKRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVLS-RGDTQEFS----------------DLNKLAKRFLKGGQKTGENHVEDAPTRA-----YIQEVVEEL--------RKGEQGECPICLE-AC--EDAV--------LTPCAHRLCRECLLASWRSPAS-------------------------------------------------------------------------------------------------------------------GFCPV--C-RKTVSKQELITA--------------------------------------------------------------------------PTDSRFQID------------------VEKNWVESSKVTALLHELEQL----------------------------------------------------RAVN-------SKSIVFSQWTAFLDLLQIALA-------RNDISFLRLDGTLNQQQREKVIKRFSEEDSV------------------------------------LVLLMSLKAGGVGINLTAASNAFVLDPWWNPAVEEQAVMRVHRIGQTKRVAIKRFIVKGTVEERMEAV-------------QAR--KQRMIS--------------------------------GALT--------DQEVRTARIEELKML-------------------------------------------------------------------------------------------------------------------------------------------FT--------------   [1040]
lcl|Ppa_CHR37_11_1_unnamed_protein_product                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSQPLIHCRVYVCRS--------------MFAKY-NSSTARITA--SSEGTLHQPLPTLLRLLHRQPITR----------------AAFTPEEL---YSRKRTLDR---HVGDVTPIVKKLKLSSA--------------------------EGSTAGAQAEVAEEEVS-----------VLSDEDVTKLV------------------GSADAC---------------------------------------------KLDEMD-----------------------------PP-PILNCELRPYQKQALHWMTQLEIGATTEDASRTLHPCWEAYDLSE------------------ENTTFYLNLFSGEASLEFPSASSAARGGILADAMGLGKTVMMISVVMANPGRGG--------LATDPAVSGSSNTLE--------APRSQLGNLSQ------------------------------------------------------------------------------------------------------------------VMEMRKKQSGLRKGGGTLIVCPMTLLGQWKSEFETH-VAGD-SLSVYAYYGTDRIR---ERK-----------ALL-------EHDIVLTTYGVVASESNQSN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FMEDGPLHSIHWFRIVLDEAHTIKAFRTSTSKAVFMLTA-DRRWCLTGTPIQNKLEDVFSLLHFLRIEPW-SNY-----------------------------------SWWEKLVQKPCEE------GD-ER---GLNLL--QAILQ-PLMLR-RTKDSLDQH-GR----PILVLPSVDMQVVECEFTEAEQDFYTALYKKSKTKFDQFVEQGKVLHNYASILELLLRLRQCCDHPFLVMS-RGDTADYA----------------DLDKLAKRFLKGEQEGL----VNRPTKA-----FVEEVVKDL--------QTGQKGECPICLE-SM--EDAV--------LTPCAHRLCRDCLFASWRSYGG-------------------------------------------------------------------------------------------------------------------GPCPI--C-RQTLTRQDIITA--------------------------------------------------------------------------PSESRFQVD------------------VEANWTDSCKVNALMNELEEL----------------------------------------------------RPSG-------AKSVVFSQWTAFLDLLEIPFK-------RKKIKFVRLDGSLSQQQREKVLNDFRSQSDI------------------------------------MVMLISLKAGGVGINLTTASNAFLLDPWWNPAVEEQAIMRIHRIGQTKDVQVKRFIVKGSVEEKMQAV-------------QAR--KQRMIA--------------------------------GALN--------NQEVRVARIEELKML-------------------------------------------------------------------------------------------------------------------------------------------FC--------------   [804]
'gi|50909117|ref|XP 466047.1| putative DNA repair protein rad8 [Oryza sativa (japonica cultivar-group)] >gi|49388292|dbj|BAD2540'    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDTVLLSVSVYINSS--------------MFHGQ-KQSTPKAAR-AATEDSTFHPLPALFKLTGLSPFKK----------------AAFTPEDL---YSRKRPLET-----KSSAP-ATKLTTEKL--------------------------RLSSDG-NEDDHAER-------------IVSDSELDDII------------------GISDSS---------------------------------------------ALEERD-----------------------------PP-DALQCDLRPYQKQAFYWMMQLEKGSSSQDAATTLHPCWEAYKLED-----------------KRELVLYLNVFSGDATTEFPSTLQLARGGILADAMGLGKTIMTIALLLADSSKGCITT------QHSTHICEEASGLG-ELPVQPHDDVKKLAIPFS------------------------------------------------------------------------------------------------------------------FSK-LRKPKTPLIAGGNLIVCPMTLLGQWKAEIEAH-ATPG-SVSIYVHYGQNRPK---EAN-----------LIG-------QSDIVLTTYGVLSSEFSNEN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------STESGGLYSIHWFRVVLDEAHMIKSPKSLISLAAAALTA-DRRWCLTGTPIQNNLEDIYSLFRFLRVEPW-RNW-----------------------------------SLWHKLVQKPYEE------GD-ER---GLKLV--QSILK-PIMLR-RNKNSTDKE-GR----PILILPPANIEVKYCDLSETEKDFYDALFRRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVLS-RGDTQEFA----------------DLNKLAKRFLHGGNGAVNGD-SSLPSRA-----YIEEVVQEL--------QKGE-GECPICLE-AF--EDAV--------LTPCAHRLCRECLLSSWRSASA-------------------------------------------------------------------------------------------------------------------GLCPV--C-RKSMSKQDLITA--------------------------------------------------------------------------PTDNRFQID------------------VEKNWVESSKISFLLQELEVL----------------------------------------------------RTSG-------AKSIIFSQWTAFLDLLQIPLS-------RHNFSFARLDGTLNLQQREKVIKEFSEDKSI------------------------------------LVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAIMRIHRIGQTKSVSIKRFIVKGTVEERMEAV-------------QAR--KQRMIS--------------------------------GALT--------DQEVRSARIEELKML-------------------------------------------------------------------------------------------------------------------------------------------FS--------------   [810]
'gi|51964730|ref|XP 507149.1| PREDICTED P0455A11.14 gene product [Oryza sativa (japonica cultivar-group)] >gi|50941691|ref|XP 48'    --------------------------------------------------------M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAGNMNNDNYIDLSSDSDIDFDFDSDDSVGGLDQELASSSSRPTENINGQYRTLPPSFTNGRHVDN-------------------------------------ARHALGSGDRAYPHSSSYRGSPNDSARATPASNRTDIVVKKHNGFASEENDNGKRILPSSFSNGRT-----------------------------------------TNAMHPVVASETRKFPPSFTNGNSQRLAENRMGKNVANGIG-----EPSSSRFPSRSSFGTDNKKVITDSDNE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DVYVYGSSSSH------RVLPPSFGRNSSA----------------NHSEFAN------------GIDMQGRLNLENRIID-----------------------------------------------------------SDERAVYQEAL------------------QNI----------------------------------------------IQDKREDD-----------------------------LPEGVLSVPLLRHQKMALAWMVSKEN-------------------------------------------------------------SSHCAGGILADDQGLGKTVSTIALIQKQRIQQSKFMSVDSDRLKAEALNLDDDDEAAPVADNKGEQTKNDEPRKDLGAGSSSTAAG---TGDVETCASLMNTAPDKTVER-NVERKKKSKA---------------------------------------------------------------------STSSTMQSMTRPAAGTLVVCPASVLKQWANELTDKVGESA-KLSVLVYHGGSRTK---DPN-----------ELA-------KYDVVITTYTIVANEVPKQNADDDTD---QKNGEESS-------AGNKRKQPPKA-QSKSKKKKKKLKDSDIY-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LASGPVARVRWFRVVLDEAQTIKNFRTQVAKACCGLRA-KRRWCLSGTPIQNAIDELYSYFHFLKYDPY-STY-----------------------------------NSFCTMIKHPIAR-------NAVH---GYKKL--QTVLR-IVLLR-RTKETLID--GE----PIIKLPPKTINLDKVDFTKEERAFYLTLEERSRQQFKAYAAAGTLKQNYANILLMLLRLRQACDHPLLVKG-HQSEYKGDGSIEMAKQLPKE-------------------------------------MIINLLAKL----------EVGEFCSVCSD-VP--EDAV--------VTMCGHVFCYQCIYERITTDEN--------------------------------------------------------------------------------------------------------------------MCPSPNC-GNTLSTDSVFSSGALR------IC---MSGVSSSH----------------------------------------------------------------ASGSSSLD-DESSSISQTSYISSKIQAAIDILNSIINT-------------------------------------YALTDSDTVESNPSRVAP-----VKAIVFSQWTGMLDLLELSLN-------SNLIQYRRLDGTMSLNSRDKAVKDFNTDPEV------------------------------------RVMIMSLKAGNLGLNMVAACHVILLDLWWNPYAEDQAIDRAHRIGQTRPVTVSRLTIKDTVEDRILAL-------------QEE--KRAMVS--------------------------------SAFG--EDK--SGGHATRLTVDDLKYL-------------------------------------------------------------------------------------------------------------------------------------------FRF-------------   [1030]
'gi|53792212|dbj|BAD52845.1| putative ATPase [Oryza sativa (japonica cultivar-group)]'                                    --------------------------------------------------------MEEAAAAAADFDGGFGGAGEDNLSMPLGDFMAFLDNEDWKEQQHE-----------------------GNQGLEMPVDSTSSENAFQNHE---------------DPSHSQMDVMVELNNGGESFDHSEDTSYRLLSNDFLENSRNGNPEMHLPMDALNHAKTVDEEIVPPYEDYTN-----------GLYYDSGCDMFAEQSGLSEVKCEGTGPMLGNSEQEGNHFTSVPMFDHSAVIPD------------IPYTELNIGDVPGSMQNGNGSCLTVQGEYLQGEYQEY-----------------PQPDYGSFDMANEIVLH--------------------------------------------------------------------------------------DLPQNNQSYELEQLPQNIC--ESSSMQVGSPDQYCDDTSLSDYYMDDVSSIESMSSEQNRSEDICFRSESSTDSSPVPSS---RNSTTEDADKYFGDAP------------------------------------------------------------------------------------------------------------------------------------------------------------KHLQNSMFPVSTQHQHSFMNSSDPMHPTFHKKYDIPRNGSSSILGNSSRNCFSLDSNRDSDLCILEGSRS----------------LASGHVLPPQGLQHNFQQSVCANPNLPRFGGRYRP-----------------------------------------------------------HEERMTLRLAL------------------QDI----------------------------------------------SQPKSEAN-----------------------------PPDGVLAVPLLRHQKIALSWMVQKER------------------------------------------------------------NGSSCSGGILADDQGLGKTVSTISLILTERSPVP---SSAVKQEPCEAVTLDDDDEDDDAE-------------------PHLKKPALAHLADTCKPEATSSTIK--------------------------------------------------------------------------------------TENPIANVKARPAAGTLVVCPTSVLRQWADELRNKVTSKA-NLTFLVYHGSNRTK---DPN-----------DLT-------KYDVVLTTYSIVSMEVPKQSSPDSDDEE-KGKPDRYG-APVGSSGSKKR-------KTSSSKKNKSGSTPESK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPEKPLAKVAWFRVILDEAQSIKNYRTQVARACWGLRA-KRRWCLSGTPIQNAVEDLYSYFRFLRYDPY-AEY-----------------------------------KKFCFMIKTPISR-------NPIT---GYKKL--QVVLK-TVMLR-RTKATMLD--GK----PIISLPPKTVSLKTVDFTSEERAFYNTLEAESREQFKEYAAAGTVKQNYVNILLMLLRLRQACDHPHLVRG-HESTSSWMSSLEMAKKLPVE-------------------------------------RQQSLLVCL---------QSCSAICALCND-AP--EDAV--------VTICGHVFCNQCILEQLTGDDS--------------------------------------------------------------------------------------------------------------------VCPVSNC-RVRLNSTSLFSRGTLECALSRSTCEFL------------------------------------------------------------------------SDDSCEDMVQGKQPRFDSSYASSKVRAALDILLSLPKLDLTHMSDDKNKIVHPD----------------------KINGNSTPSEYAGTKIT-----EKAIVFSQWTRMLDLVEVHLK-------SSHLSYRRLDGTMSVAARDRAVKDFNTNPEV------------------------------------SVMIMSLKAASLGLNMVAACHVLLLDLWWNPTTEDQAVDRAHRIGQTRPVTVSRLTIKDTVEDRILAL-------------QEK--KREMVA--------------------------------SAFG--EDK--SGAHQTRLTVEDLNYL-------------------------------------------------------------------------------------------------------------------------------------------FMV-------------   [1213]
'gi|53792213|dbj|BAD52846.1| putative ATPase [Oryza sativa (japonica cultivar-group)]'                                    --------------------------------------------------------MEEAAAAAADFDGGFGGAGEDNLSMPLGDFMAFLDNEDWKEQQHE-----------------------GNQGLEMPVDSTSSENAFQNHEEIFENKENWSNYSHTDPSHSQMDVMVELNNGGESFDHSEDTSYRLLSNDFLENSRNGNPEMHLPMDALNHAKTVDEEIVPPYEDYTN-----------GLYYDSGCDMFAEQSGLSEVKCEGTGPMLGNSEQEGNHFTSVPMFDHSAVIPD------------IPYTELNIGDVPGSMQNGNGSCLTVQGEYLQGEYQEY-----------------PQPDYGSFDMANEIVLH--------------------------------------------------------------------------------------DLPQNNQSYELEQLPQNIC--ESSSMQVGSPDQYCDDTSLSDYYMDDVSSIESMSSEQNRSEDICFRSESSTDSSPVPSS---RNSTTEDADKYFGDAP------------------------------------------------------------------------------------------------------------------------------------------------------------KHLQNSMFPVSTQHQHSFMNSSDPMHPTFHKKYDIPRNGSSSILGNSSRNCFSLDSNRDSDLCILEGSRS----------------LASGHVLPPQGLQHNFQQSVCANPNLPRFGGRYRP-----------------------------------------------------------HEERMTLRLAL------------------QDI----------------------------------------------SQPKSEAN-----------------------------PPDGVLAVPLLRHQKIALSWMVQKER------------------------------------------------------------NGSSCSGGILADDQGLGKTVSTISLILTERSPVP---SSAVKQEPCEAVTLDDDDEDDDAE-------------------PHLKKPALAHLADTCKPEATSSTIK--------------------------------------------------------------------------------------TENPIANVKARPAAGTLVVCPTSVLRQWADELRNKVTSKA-NLTFLVYHGSNRTK---DPN-----------DLT-------KYDVVLTTYSIVSMEVPKQSSPDSDDEE-KGKPDRYG-APVGSSGSKKR-------KTSSSKKNKSGSTPESK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPEKPLAKVAWFRVILDEAQSIKNYRTQVARACWGLRA-KRRWCLSGTPIQNAVEDLYSYFRFLRYDPY-AEY-----------------------------------KKFCFMIKTPISR-------NPIT---GYKKL--QVVLK-TVMLR-RTKATMLD--GK----PIISLPPKTVSLKTVDFTSEERAFYNTLEAESREQFKEYAAAGTVKQNYVNILLMLLRLRQACDHPHLVRG-HESTSSWMSSLEMAKKLPVE-------------------------------------RQQSLLVCL---------QSCSAICALCND-AP--EDAV--------VTICGHVFCNQCILEQLTGDDS--------------------------------------------------------------------------------------------------------------------VCPVSNC-RVRLNSTSLFSRGTLECALSRSTCEFL------------------------------------------------------------------------SDDSCEDMVQGKQPRFDSSYASSKVRAALDILLSLPKLDLTHMSDDKNKIVHPD----------------------KINGNSTPSEYAGTKIT-----EKAIVFSQWTRMLDLVEVHLK-------SSHLSYRRLDGTMSVAARDRAVKDFNTNPEV------------------------------------SVMIMSLKAASLGLNMVAACHVLLLDLWWNPTTEDQAVDRAHRIGQTRPVTVSRLTIKDTVEDRILAL-------------QEK--KREMVA--------------------------------SAFG--EDK--SGAHQTRLTVEDLNYL-------------------------------------------------------------------------------------------------------------------------------------------FMV-------------   [1228]
'gi|50902058|ref|XP 463462.1| putative helicase-like transcription factor [Oryza sativa (japonica cultivar-group)]'                  --------------------------------------------------------MEEAAAAAADFDGGFGGAGEDNLSMPLGDFMAFLDNEDWKEQQHEWRWAINGHQAVGIGEGQTGSSLVGNQGLEMPVDSTSSENAFQNHE------------------------------------------------DFLENSRNGNPEMHLPMDALNHAKTVDEEIVPPYEDYTN-----------GLYYDSGCDMFAEQSGLSEVKCEGTGPMLGNSEQEGNHFTSVPMFDHSAVIPD------------IPYTELNIGDVPGSMQNGNGSCLTVQGEYLQGEYQEY-----------------PQPDYGSFDMANEIVLH--------------------------------------------------------------------------------------DLPQNNQSYELEQLPQNIC--ESSSMQVGSPDQYCDDTSLSDYYMDDVSSIESMSSEQNRSEDICFRR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQHNFQQSVCANPNLPRFGGRYRP-----------------------------------------------------------HEERMTLRLAL------------------QPL------------------------------------------------------------------------------------LDAPLASSLL---KIALSWMVQKER------------------------------------------------------------NGSSCSGGILADDQGLGKTVSTISLILTERSPVP---SSAVKQEPCEAVTLDDDDEDDDAE-------------------PHLKKPALAHLADTCKPEATSSTIK--------------------------------------------------------------------------------------TENPIANVKARPAAGTLVVCPTSVLRQWADELRNKVTSKA-NLTFLVYHGSNRTK---DPN-----------DLT-------KYDVVLTTYSIVSMEVPKQSSPDSDDEE-KGKPDRYG-APVGSSGSKKR-------KTSSSKKNKSGSTPESK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPEKPLAKVAWFRVILDEAQSIKNYRTQVARACWGLRA-KRRWCLSGTPIQNAVEDLYSYFRFLRYDPY-AEY-----------------------------------KKFCFMIKTPISR-------NPIT---GYKKL--QVVLK-TVMLR-RTKATMLD--GK----PIISLPPKTVSLKTVDFTSEERAFYNTLEAESREQFKEYAAAGTVKQNYVNILLMLLRLRQACDHPHLVRG-HESTSSWMSSLEMAKKLPVE-------------------------------------RQQSLLVCL---------QSCSAICALCND-AP--EDAV--------VTICGHVFCNQCILEQLTGDDS--------------------------------------------------------------------------------------------------------------------VCPVSNC-RVRLNSTSLFSRGTLECALSRSTCEFL------------------------------------------------------------------------SDDSCEDMVQGKQPRFDSSYASSKVRAALDILLSLPKLDLTHMSDDKNKIVHPD----------------------KINGNSTPSEYAGTKIT-----EKAIVFSQWTRMLDLVEVHLK-------SSHLSYRRLDGTMSVAARDRAVKDFNTNPEV------------------------------------SVMIMSLKAASLGLNMVAACHVLLLDLWWNPTTEDQAVDRAHRIGQTRPVTVSRLTIKDTVEDRILAL-------------QEK--KREMVA--------------------------------SAFG--EDK--SGAHQTRLTVEDLNYL-------------------------------------------------------------------------------------------------------------------------------------------FMV-------------   [1082]
'gi|15239896|ref|NP 199166.1| ATP binding / ATP-dependent helicase/ DNA binding / helicase/ nucleic acid binding / protein bindi'    --------------------------------------------------------MAIVDDAEMRLTESEAVSSSDDRKIVADTPDFIDESSLVIRTTTGVRISALPAEQSLVDSDGSNSEVTLPAKDEVISDGFTCVNKEIVESDSFREQNLEIGEPDLDVENRKEAMIIDSIENSVVEIVSSASGDDCNVKVEVVEPELLVENLVVAKEEEEMIVDSIEDSVVEIVSTASGCDCNVKVEVVDPELCVDNLVVVKEEEMIADSIA-----------------------ESVVETVSRGLDYECVDVKVKEEPDLGTKLEEDSVFPNVLEKKDEVIKVLEDQPSEIN---KKLEQENDDLFSSGDSDGTSA---KRRKMEMESYAPVGVESCILAPTPL-------------------------------------------------RVVKPEKLDTPEVIDLESEKSYTHVKMEPVEEI-KVEAVKMSSQVEDVKFSREQKSVYVKKEPVGARKVKV------EDGDFPVEKDWYLVGRSLV------------------------------------------TATSTSKG-RKLEDNEIVNFTFSSVA--------------------------------------------------KWKVPNIVRFSTKR-CGEIGRL----PMEWSNWAVSLLRSGKVKMLGRCVAAPPFLTMMQEIMLYVSFYIHSS--------------IFTDV-SKSTWRIGS-SPNLESTLHPLLQLFKHLTIKPYQK----------------AEFTPEEL---NSRKRSLNL---EDDYDER-AALLAIAKR--------------------------RKGCQQSLEQNKDEE-------------EAPESYMNRVV------------------GAADSY---------------------------------------------NLEEME-----------------------------AP-STLTCNLRPYQKQALYWMSESEKGIDVEKAAETLHPCWEAYRICD-----------------ERAPSIYLNIFSGEATIQFPTATQMARGGILADAMGLGKTVMTIALILARPGRGN--------PENEDVLVADVNADKRN-----------------------------------------------------------------------------------------------------------------------------------RKEIHMALTTVKAKGGTLIICPMALLSQWKDELETH-SKPD-TVSVLVYYGGDRTH---DAK-----------AIA-------SHDVVLTTYGVLTSAYKQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DMANSIFHRIDWYRIVLDEAHTIKSWKTQAAKATFELSS-HCRWCLTGTPLQNKLEDLYSLLCFLHVEPW-CNW-----------------------------------AWWSKLIQKPYEN------GD-PR---GLKLI--KAILR-PLMLR-RTKETRDKE-GS----LILELPPTDVQVIECEQSEAERDFYTALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVMS-RADSQQYA----------------DLDSLARRFLDNNPDSVS---QNAPSRA-----YIEEVIQDL--------RDGNSKECPICLE-SA--DDPV--------LTPCAHRMCRECLLTSWRSPSC-------------------------------------------------------------------------------------------------------------------GLCPI--C-RTILKRTELISC--------------------------------------------------------------------------PTDSIFRVD------------------VVKNWKESSKVSELLKCLEKI----------------------------------------------------KKSGSG-----EKSIVFSQWTSFLDLLEIPLR-------RRGFEFLRFDGKLAQKGREKVLKEFNETKQK------------------------------------TILLMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTVEERMQQV-------------QAR--KQRMIA--------------------------------GALT--------DEEVRSARLEELKML-------------------------------------------------------------------------------------------------------------------------------------------FR--------------   [1277]
'gi|80476497|gb|AAI08610.1| Unknown (protein for MGC:131155) [Xenopus laevis]'                                    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEDPNSGKSSPAVWNRGTGRSSSWNFFQLAQYGRTTNHSQFSSPNVFFHLEQDDISADDTSSSAEDDFDSA----------------------------------------------------------VLFGMLRG--NVVGLRYYSGVVNNNEMVALQREPNN-QYD--------------------------------------------------RNAVKINNVN-GEQVGHI----KKELAAALAHIMDQKMAKIEGVVPYGAQN---VFTMPVNLSFWGRAE-----------------------NKQAVLDHLIK-----------HGFRLGPIPN----------------SSQLGYG----SSKSKSERAGPSFRAPTLPATQMTT----------------------------------------------------------EQLKTEFDKLF------------------EDLKEDDK--------------------------------------------TQELE-----------------------------PA-EVVGTKLLSHQKQALSWMVSREN-------TKELPPFWEE------------------------RNHLYYNTLTNFAEKQKP---ENVRGGILADDMGLGKTLSVIALILTNFY--DGCPLPTEKTKQEQQMSV-------------ESDLSKPNLSQKQFKAKKNERSTNNKEKSETLSQKASSSRPKRQKASKAKYTYSSGSEEDE-GWLPRKVKATAQCTLHD------------DDDDAFANALSGFPTTVRKQKHKKGVT--------VSQSISKAGPEERRRTTLIICPLSVLSNWIDQFEQH-IKPEVHLNIYIYYGPERTK---DPK-----------VLS-------EQDVVVTTYSVLSSDYG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SRSESPLHKMKWLRVVLDEGHTIRNPNAQQTQAVLSLEA-QRRWILTGTPIQNSLKDLWSLICFLKLKPF-TDR-----------------------------------EWWHRTIQRPVTT------GE-EG---GLRRL--QALIK-NITLR-RTKTSKIR--GR----PVLDLPERKVFIQHVELSEEEREIYESMKNEGKAVISRYVDEGTVLSHYADVLAVLLRLRQLCCHPHLVSS-TLSTMASTAD--------------------------------------STPGDVREKLVQKIKLVL--------SSGSDEECAICLD-SL--NMPV--------ITYCAHVFCKPCICQVIQLKKQE------------------------------------------------------------------------------------------------------------------AKCPL--C-RGLLRLDQLVEC--------------------------------------------------------------------------PQEDLDSSIN---------------KKPDQKWMSSTKISALMHSLVEQ----------------------------------------------------RRKDAT-----IKSIVVSQFTSFLSLIEVALR-------ESGFMFTRLDGSMTQKKRTEAIQSFQRPDAQ----------------------------------SPTIMLLSLKAGGVGLNLTAASRVFLMDPAWNPAAEEQCFDRCHRLGQTKEVIITKFVVRDSVEENMLKI-------------QSK--KRQLAA--------------------------------GAFG--AKKS-SASQIKQARIEDIRTL-------------------------------------------------------------------------------------------------------------------------------------------VDL-------------   [999]
'gi|15219872|ref|NP 176309.1| ATP binding / ATP-dependent helicase/ DNA binding / helicase/ nucleic acid binding / protein bindi'    --------------------------------------------------------M--------GEEGSMFGLGGEFPVDDCDGGFEFEDDDETIDIETLYRILDEKPDSAEV----VFSAFVGSQENLSPVGSSADELKDSQLL--------------------------------------------------------------NGSFDEHVKMEAGLSPSPAHTCSASLK---------DWFSLSQGEQPVETCGVSQSEMTSCSISSSFSDPDGNMMAFNPVNCDVDTVSKQDDKIIDSKSMLTPYFDNVTGYGVGLGANHNSSAMSV-------FFNNSNSLSDSADNY-------VSSAQDCYNTSGTSLSD--------------------------------------------------------------------------------------HTPNSVQNFAFEFFP-NKEE-AVNDVESGVSESQSDGASRMIFDRHGRVDNGSL---ERKPPIDFSSA-----------------RGISFKFESNPSVSPACVKPYNSFDSHLADSDLDRPNNYSCSFQDNKTVHVKVKPEAESEKV-VYSSVPGEFSVRDDAYLSGETNRWWSGASSSAVSYQTDIEKGYSYMAPQTALPSQDSGKISSNHFYDSDTCLQYVVEDPSPVTQNNEYKDFQIQQGDREYIQPRGIDSQFSNASFESVQSHSSECISDSD--------------DDSDVCIIEPYGQS------AIPHRPLAMKMPV----------------VSSEYST-----------VSHNFNQ--SGGLKLQS-----------------------------------------------------------NKENMIFQAAL------------------QDL----------------------------------------------TQPNSEAI-----------------------------LPDGVLTVPLLRHQRIALSWMAQKET------------------------------------------------------------SGFPCSGGILADDQGLGKTVSTIALILKERS---KPAQACEESTKKEIFDLESETGE---------------------------------CAPLKPSGRSKHFEH-------SQLLSNENKV---------------------------------------------------------------------GGDSVGKVTGRPAAGTLVVCPTSVMRQWADELHKKVTSEA-NLSVLVYHGSSRTK---DPH-----------ELA-------KYDVVVTTFSIVSMEVPKQPLVDDEDEE-KDGVHDGGTAATGFCSNKKR-------KYPPDSKKKGSKKKKVE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLSGPLAKVSWFRVVLDEAQSIKNYKTQVARACWGLRA-KRRWCLSGTPIQNSIDDLYSYFRFLKYDPY-SSY-----------------------------------VLFCSTIKNPITR-------NPVK---GYQKL--QAILK-TVMLR-RTKGSLLD--GK----PIISLPPKSIELRKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLLVNG-EYS-FTWESSVGLAKK----------------------------------------------QIQS---------DASLAICGICND-AP--EDAV--------ASVCGHVFCKQCIYERLTGDSN--------------------------------------------------------------------------------------------------------------------HCPFANC-NVRLTISSLSSKTRLD------DA---MPDMQERA----------------------------------------------------------------TSNSLS-----PCSDEDLPYGSSKIKAALEILQSLPKAHD--LTDSNQISENREYSGL---------------SITPVKNEGMSVDVPIKVAG-----EKAIVFSQWTKMLNLLEASLV-------SSHIQYRRLDGTMSVAARDKAVQDFNTLPEV------------------------------------TVMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVEDRILAL-------------QQK--KRMMVA--------------------------------SAFG--EDE--KGSRQSHLTVEDLSYL-------------------------------------------------------------------------------------------------------------------------------------------FMADS-----------   [1287]
'gi|9454567|gb|AAF87890.1| Similar tp transcription factors [Arabidopsis thaliana]'                                    --------------------------------------------------------M-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DSAIDIS--SDSDVEIQETRTRPQHPPRIAEVVDLGAGSHRRDLSTLRPHFLSGSSSGA------------------------------------------------------------------------------------------------NGHTKTG----------------------LTNLDSRNGFESKPLPRAEHHTHIPGNGSIVTSRIPNISVGDYEKFSSQQAFKRTHPPTFSRPP-FPPRPDIGTSN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GNASHF---RGGAHDDLGMGRVTNGT------RILPPSVAHGTSA----------------SPSHFNG-----------LSDPMHRNGIGEERNSE-----------------------------------------------------------NDERLIYQAAL------------------QTMCMEALLFFLFDKREGIGTFTIVAFVSYFALLHQGYDFHLKSLVFLHNSPGTESTQVRGRFTCWSSFGSPYEASGIQVYIIFQYLSEWSCVLNTVVSQKIALAWMFQKET------------------------------------------------------------NSLHCMGGILADDQGLGKTVSTIALILKQMH-EAKLKSKNSGNQEAEALDLDADDESENAFE------K-----------PESKASN----------GSGVNGDS-------GIKKAKGEEA---------------------------------------------------------------------STSTRKFNRKRPAAGTLIVCPASVVRQWARELDEKVTDEA-KLSVLIYHGGNRTK---DPI-----------ELA-------KYDVVMTTYAIVSNEVPKQPLVDDDEND-EKNSEKYG-LASGFSINKKRKNVVGTTKKSKKKKGNNNAGDSSD-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PDSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRA-KRRWCLSGTPIQNTIDDLYSYFRFLKYDPY-AVY-----------------------------------KSFCHQIKGPISR-------NSLQ---GYKKL--QAVLR-AIMLR-RTKGTLLD--GQ----PIINLPPKTINLSQVDFSVEERSFYVKLESDSRSQFKAYAAAGTLNQNYANILLMLLRLRQACDHPQLVKR-YNSDSVGKVSEEAVKKLPKE-------------------------------------DLVSLLSRL---------E-SSPICCVCHD-PP--EDPV--------VTLCGHIFCYQCVSDYITGDED--------------------------------------------------------------------------------------------------------------------TCPAPRC-REQLAHDVVFSKSTLR------SC---VADDLGCS----------------------------------------------------------------SSEDNSHD---KSVFQNGEFSSSKIKAVLDILQSLSNQGTSNSTQNGQMASSSQ---------QPNDDDDDDDDDVTIVEKTSLKSTPSNGGP-----IKTIIFSQWTGMLDLVELSLI-------ENSIEFRRLDGTMSLIARDRAVKEFSNDPDV------------------------------------KVMIMSLKAGNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKNTVEDRILAL-------------QEE--KRKMVA--------------------------------SAFG--EDH--GGSSATRLTVDDLKYL-------------------------------------------------------------------------------------------------------------------------------------------FMV-------------   [1062]
'gi|18403061|ref|NP 564568.1| ATP binding / ATP-dependent helicase/ DNA binding / helicase/ nucleic acid binding / protein bindi'    --------------------------------------------------------M-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DSAIDIS--SDSDVEIQETRTRPQHPPRIAE------GSHRRDLSTLRPHFLSGSSSGA------------------------------------------------------------------------------------------------NGHTKTG----------------------LTNLDSRNGFESKPLPRAEHHTHIPGNGSIVTSRIPNISVGDYEKFSSQQAFKRTHPPTFSRPP-FPPRPDIGTSN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GNASHF---RGGAHDDLGMGRVTNGT------RILPPSVAHGTSA----------------SPSHFNG-----------LSDPMHRNGIGEERNSE-----------------------------------------------------------NDERLIYQAAL------------------QEL----------------------------------------------NQPKSEVD-----------------------------LPAGLLSVPLMKHQKIALAWMFQKET------------------------------------------------------------NSLHCMGGILADDQGLGKTVSTIALILKQMH-EAKLKSKNSGNQEAEALDLDADDESENAFE------K-----------PESKASN----------GSGVNGDS-------GIKKAKGEEA---------------------------------------------------------------------STSTRKFNRKRPAAGTLIVCPASVVRQWARELDEKVTDEA-KLSVLIYHGGNRTK---DPI-----------ELA-------KYDVVMTTYAIVSNEVPKQPLVDDDEND-EKNSEKYG-LASGFSINKKRKNVVGTTKKSKKKKGNNNAGDSSD-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PDSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRA-KRRWCLSGTPIQNTIDDLYSYFRFLKYDPY-AVY-----------------------------------KSFCHQIKGPISR-------NSLQ---GYKKL--QAVLR-AIMLR-RTKGTLLD--GQ----PIINLPPKTINLSQVDFSVEERSFYVKLESDSRSQFKAYAAAGTLNQNYANILLMLLRLRQACDHPQLVKR-YNSDSVGKVSEEAVKKLPKE-------------------------------------DLVSLLSRL---------E-SSPICCVCHD-PP--EDPV--------VTLCGHIFCYQCVSDYITGDED--------------------------------------------------------------------------------------------------------------------TCPAPRC-REQLAHDVVFSKSTLR------SC---VADDLGCS----------------------------------------------------------------SSEDNSHD---KSVFQNGEFSSSKIKAVLDILQSLSNQGTSNSTQNGQMASSSQ---------QPNDDDDDDDDDVTIVEKTSLKSTPSNGGP-----IKTIIFSQWTGMLDLVELSLI-------ENSIEFRRLDGTMSLIARDRAVKEFSNDPDV------------------------------------KVMIMSLKAGNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKNTVEDRILAL-------------QEE--KRKMVA--------------------------------SAFG--EDH--GGSSATRLTVDDLKYL-------------------------------------------------------------------------------------------------------------------------------------------FMV-------------   [981]
'gi|58531994|emb|CAE04094.3| OSJNBa0096F01.3 [Oryza sativa (japonica cultivar-group)]'                                    --------------------------------------------------------M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HGDWPESPSQEVLYADEIAAVRAVLGAGLPEARVVAAISRCGGNAERAINALLDDATAGVEDKPEPKKGKGAK--TAAPPVKAERDAGGAAPKPPPPPVKVEVL-----DDEPLGSQESNGCSARVKKEREDELLVKAP--------PPMPD----------------------RVKEEDGVAAKRGAATANAAGISLVPRPKKRSRVHDEADTIDLTATHPVPYLNPRPIRAVPPPEAMEM----------LESRRVRARPPPPSSDLRMVVAPPDAEFGEFPEERDWFLVGRSYV------------------------------------------TGLSTNRGRRRLDAGELVHFSFPSLE-RTYGGIKVSNKKAA-------------------------------------ALAEIVRFSTNR-AGEIGKL----STEWTKCLVPLVSSSKVKIQGKIVFPTVELRLMQEILLYVSFYIHRS--------------VFTASGNNSSWDLLA-PANVDYSTNPLYRLFRLLKLRAFTK----------------ADITPEEL---AAGKRPRNLRGDDNDEDEP-MAIVGLENR--------------------------RTAGQTFPEQGTDEQ-------------AISEAALNKIV------------------GTAETY---------------------------------------------DLEEAE-----------------------------PP-STLVSVLKPYQKEALFWMSQLEKGIDGDQAKKTLHPCWSAYKIVD-----------------KRAPAVYVNVFTGEATTQFQSVTQSARGGILADAMGLGKTVMTIALILSNPRGELEQDKRGTRDRDTKA----------------------------------------------------------------------------------------------------------------------------------------------------QTSRSSVRGGTLIICPMALLGQWKDELEAH-STPG-ALSVFVYYGGDRTT---DLR-----------FMA-------QHSVVLTTYGVLQSAHKNDG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSIFHRIDWYRVVLDEAHTIKSPRTKAARAAYELTS-HCRWCLTGTPLQNNLEDLFSLLCFLHVEPW-GDA-----------------------------------SWWNKLIQRPYEN------GD-ER---GLKLV--RAILR-PLMLR-RTKETKDKM-GN----PILVLPPANIEIVECEQSEDERDFYEALFRRSKVQFDKFVAQGSVLNNYANILELLLRLRQCCDHPFLVIS-RADTQKYT----------------DLDELAQRFLDGVQRDSARR-SAPPSQA-----YVEEVVEEI--------RQGATTECPICLESAS--DDPV--------LTPCAHRMCRECLLSSWRTPSG-------------------------------------------------------------------------------------------------------------------GPCPL--C-RSPITKSELITL--------------------------------------------------------------------------PSQCRFQVD------------------PENNWKDSCKVIKLIKILEGL----------------------------------------------------QEKR-------EKSIVFSQFTSFFDLLEVPFN-------QKGIKFLRFDGKLSQKHREKVLKEFSESKDK------------------------------------LVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRAVQVRRFIVKDTVEERMQKV-------------QAC--KQRMIS--------------------------------GALT--------DDEVRSARIEQLKML-------------------------------------------------------------------------------------------------------------------------------------------FT--------------   [1132]
lcl|Smo_CHR37_20_2_unnamed_protein_product                                    --------------------------------------------------------M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ECHLLYMIPRLRQHSRTINPVT-TTVCESSWSFGNGAAAKSEVIEISDGEEDEVGIVGEKRKLPLSFASQETTSKAWW---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YAQEQTNASVKKEENGNA---------------------------------------------EVLNSDDESDQRDERGGTTRRHYSSEPR-------------------------------------------------------VQEDRNLRTIL------------------QRMIT--------------------------------------------VDEKEEAS-----------------------------PEEGLMTIPLLKHQRIALAWMEKSEN-------------------------------------------------------------RVECSGGILADDQGLGKTVSTIALILKARAPVSKLNLAISETALIESEPVDLDDDEDGDKDDDESSQK-------------------------------------------------------------------------------------------------------------------------LDDRKSSLGRGRKTGGTLVICPTSVLRQWAHEIKAKVTPAA-NLSILVYHGSSRTR---SAD-----------DLA-------KYDVVLTTYPIVSMEVPKQLLPEEKEED-KRNYDDYG-LGNFRGYPKK-------------KSKPKKRLSDEK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IPESGPLAKVSWYRVVLDEAQSIKNSRTQVARACWGLRA-KKRWCLSGTPIQNAIDDLYSYFRFLRFDPL-DTY-----------------------------------KSFRSEVKDPITR-------NPVL---GYKKL--QLILQ-VVML-----PTLID--GQ----PIVNLPPRFVCLQQAEFSEEERIFYNSLELESRRQFQVYAEEGTLQSNYVNILYMLLRLRQACDHPLLVKE-TNNESTEFDAVENVKKLALE-------------------------------------RRVELQNTL---------DRNKSICTICAD-VP--EWAV--------ISWCGHVFCRQCISEKLATSDD-------------------------------------------------------------------------------------------------------------------TECPFPKC-TIQLNSCLLYSLTALR------NCNLGIEPT--------------------------------------------------------------------TNNNNKGKKKRQPTDTNGWISSSKIEAVMKLLKNLPVKNP---------------------------------------AGPAPDGTRRRAET-----EKAIVFSQWTSMLDLLEPQLR-------KADLRFSRLDGTMTVVERDSAVTEFNTNPEV------------------------------------SVMIMSLKAASLGLNMVAACHVLLLDVWWNPTTEDQAIDRAHRIGQTRPVHVSRFTVKNTIEDRILAL-------------QER--KKQMVS--------------------------------SAFG--ENE--GNNQKSRLTMDDIRFL-------------------------------------------------------------------------------------------------------------------------------------------FSG-------------   [853]
lcl|Smo_CHR37_98_2_unnamed_protein_product                                    --------------------------------------------------------M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CQRPVGDPCQKLLEESRICAGGIDQSYTNQEWNAFVDDACVQHGVQGAESVAAQAEPEADMELDQLFCLLKEPEKNLQDIVGQDEILAAPETSPLVQAPQEYTHGVSPS---------------------------------------------LHDPSSSATFPYYQSSDYDRSSGSVIGAEGEVYDPTLNSTTFTPVCESSWSFGNGAAAKSEVIEISDGEEDEVGIVGEKRKLPLSFASQETTSKAWW---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YAQEQTNASVKKEENGNA---------------------------------------------EVLNSDDESDQRDERGGTTRRHYSSEPR-------------------------------------------------------VQEDRNLRTIL------------------QRMIT--------------------------------------------VDEKEEAS-----------------------------PEEGLMTIPLLKHQRIALAWMEKSEN-------------------------------------------------------------RVECSGGILADDQGLGKTVSTIALILKARAPVSKLNLAISETALIESEPVDLDDDEDGDKDDDESSQK-------------------------------------------------------------------------------------------------------------------------LDDRKSSLGRGRKTGGTLVICPTSVLRQWAHEIKAKVTPAA-NLSILVYHGSSRTR---SAD-----------DLA-------KYDVVLTTYPIVSMEVPKQLLPEEKEED-KRNYDDYG-LGNFRGYPKK-------------KSKPKKRLSDEK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IPESGPLAKVSWYRVVLDEAQSIKNSRTQVARACWGLRA-KKRWCLSGTPIQNAIDDLYSYFRFLRFDPL-DTY-----------------------------------KSFRSEVKDPITR-------NPVL---GYKKL--QLILQ-VVML-----PTLID--GQ----PIVNLPPRFVCLQQAEFSEEERIFYNSLELESRRQFQVYAEEGTLQSNYVNILYMLLRLRQACDHPLLVKE-TNNESTEFDAVENVKKLALE-------------------------------------RRVELQNTL---------DRNKSICTICAD-VP--EWAV--------ISWCGHVFCRQCISEKLATSDD-------------------------------------------------------------------------------------------------------------------TECPFPKC-TIQLNSCLLYSLTALR------NCNLGIEPT--------------------------------------------------------------------TNNNNKGKKKRQPTDTNGWISSSKIEAVMKLLKNLPVKNP---------------------------------------AGPAPDGTRRRAET-----EKAIVFSQWTSMLDLLEPQLR-------KADLRFSRLDGTMTVVERDSAVTEFNTNPEV------------------------------------SVMIMSLKAASLGLNMVAACHVLLLDVWWNPTTEDQAIDRAHRIGQTRPVHVSRFTVKNTIEDRILAL-------------QER--KKQMVS--------------------------------SAFG--ENE--GNNQKSRLTMDDIRFL-------------------------------------------------------------------------------------------------------------------------------------------FSG-------------   [982]
lcl|Ppa_CHR37_91_1_unnamed_protein_product                                    --------------------------------------------------------M----------------------------------------------------------------------------------------------------------------ADVEMEQGNLGEMVERFPWGFHMGEARLRGDFDSSELGQYDGAWELEEGPRDWMQVDVSDDEGVSQPVQDEADEPEVFIDDILSVIEEDSSSQEMEIAPHTPAVPEG-----------------HYDVDPAPSLYQTTPDLSWQHDLNGNGEAGLEDTSDEILSLDNIGRGTIWYFIEPTQDLD-------YERPQKNDGSVLVSNRTYLERLSPGVS----------------------------------------------------------------------------------------------------RPSRSTSSSPVTMLDNSSRHEYVFENPFERKSMIPSTRELNFNGHPIVDLSSDDSDGVEEESELRELNSGLRRKRNLLSWGGGGMKRPRESIHRYYMQPSSHQYSEFPFSQIAK-------------------------------------------------------------------------------------------------------------------------------------------TAPEIYPSLHRTQTWDPSSKYSLQFGRLEASVTTPTSFRSIPGNESHKRSI----------------NGTVIAA-----------AVDPVKR----------------------------------------------------------------------SEELAIQAVV------------------QAFSL--------------------------------------------GDEKEEAT-----------------------------PDQDLLTMTLLKHQRIALAWM---------------------------------------------------------------------------------------------NRAPVQKSGSSSVQSLRPEGSTVDLEDYEDEEE-------------------QASQERK---LETRQCSSSP-NENG-------SQQQLDDPRS------------------------------------------------------------------------SQSSNKGRPAAGTLVVCPTSVLRQWAQEIRDKVATKA-GLSVLVYHGSNRIK---DPQ-----------EIA-------KFDVVLSTYSIVSMEVPKQALPEERDEENRRNGSEYE-FVPFTK-PKKE-------KAKKGKVKGKGAGADGD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPDSGPLARVAWFRVVLDEAQSIKNYRTQVSRAAWGLRA-KRRWCLSGTPIQNSVDDLFSYFRFLRYSPW-DAY-----------------------------------EKFQRDIKEPVGR-------NPSE---GYKKL--QAILK-PVVLR-RTKTSLLD--GK----PIVNLPPRIVKLQQAEFSLDERSFYENLEIESREQFQMYAAAGTVQNNYVNILWMLLRLRQACDHPMLVKKCAKGEAFQKTTIDAVRKLPLS-------------------------------------LRSELIQCL---------EGGRTICHVCQD-AP--EDPV--------VSICAHVFCRQCISEQMNGDE---------------------------------------------------------------------------------------------------------------------TCPSPKC-KRSLNNSSLFTLSALK------DL---GVGGVENL----------------------------------------------------------------GNEVKSIE-PAVTEVEQTWNTSSKIDAMMNTLQALPKISV--LVEDGKIVEGSKAELLLKSEALEIEQGETLGTGLREVSESI--KIEKVDST-----EKAIVFSQWTSMLDLLELPLK-------KSGLCYRRLDGTMSVVARDRAVSDFNTLPEV------------------------------------TVMIMSLKAASLGLNMVAASHVLLLDVWWNPTTEDQAIDRAHRIGQTRTVNVSRFTVKNTIEDRILALQVVLTFLSPGNFMQER--KRQIVA--------------------------------SAFG--END--GGEQKNRLTVEDLRYL-------------------------------------------------------------------------------------------------------------------------------------------FRV-------------   [1146]
'gi|15231009|ref|NP 188635.1| ATP binding / ATP-dependent helicase/ DNA binding / helicase/ nucleic acid binding / protein bindi'    --------------------------------------------------------M-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DSAIEISSGSDSDDEVPPQPVWPQTRTRMDP-----TWLSRRPLPTVDSH---ARAEHT------------------------------------------------------------------------------------------------NQAPPNG----------------------ASSDTSRPGV-SKPF---------TGNGNTVNSRISSGSGADYVRLSSEQALKRTLPPSFNSPP-LPARS--GTNNISNASGSRVGVDYERPLSQQAL---KRTLPPSFNPPPLPSRSGTNNIR---NAGGSRFGADYSHPAV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAVGNKSTFGDHYSGAHAEIGIQRGVNGV------RILPPSLTHGTSA----------------SVLHHAG-----------SSDPMHRFGGGEDRNPD-----------------------------------------------------------NDERLVYQAAL------------------QVL----------------------------------------------NQPMTESD-----------------------------LPPGTLSVPLMRHQKIALAWMFQKET------------------------------------------------------------SSFNCPGGILADDQGLGKTVSTIALILKQKI-VSQLKSESSCKQETEALVLDADDESDNAKHESGSHVK-----------PELKVSSNSETSVLSACGNDENDSS-------DMEKAEDEEA---------------------------------------------------------------------NSSTRAFQWKRPAAGTLIVCPASVVRQWARELDEKVSEES-KLSVLVYHGSNRTK---DPN-----------ELA-------EYDVVVTTYAIVTNEAPNKFLVDEDEND-EKNTDRYG-LASGFSNNKKRKVVVGASKKSKRRGRKSTNDTSSE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PDCGPLGKVGWFRIVLDEAQTIKNYRTQMARSCCTLRA-KRRWCLSGTPIQNTIDDLYSYFRFLRYDPY-AVY-----------------------------------KSFYSTIKVPISR-------NSCQ---GYKKL--QAVLR-AIMLR-RTKGTLLD--GK----PIINLPPKVVNLSQVDFSVAERSFYKKLEADSRSQFKAYADAGTLSQNYANILLLLLRLRQACDHPQLVKR-YNSDPVGKVSEAAVRRLPRE-------------------------------------ARSRLINRL---------ESSSAICYECNE-PP--EKPV--------VTLCGHIFCYECVLEYITGDEN--------------------------------------------------------------------------------------------------------------------TCPVPRC-KQQLARDVVFSESSLR------NC---TSDDSGCS----------------------------------------------------------------SSHDNGLD---RSVFQKRDFCSSKIKAVLDILQSLSQPDSPNSAQHGQMPSSSR---------PY------DDDDVTIVEPMRLHSSSPSQGA-----VKTIIFSQWTGMLDLVELRIL-------ESGIEFRRLDGTMSLAARDRAVKEFSKKPDV------------------------------------KVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILKL-------------QEE--KRTMVA--------------------------------SAFG--EEH--GGSSATRLTVDDLKYL-------------------------------------------------------------------------------------------------------------------------------------------FMV-------------   [1047]
'gi|3116120|emb|CAA18870.1| SPBC23E6.02 [Schizosaccharomyces pombe] >gi|19113394|ref|NP 596602.1| hypothetical protein SPBC23E6.'    --------------------------------------------------------M----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RNNTAFEQFTLNPCEQIPLDDKHNIGFNKNNTPDYSSSASSDQLLKNDINRHEMERRIAFLNRKQALFNAFMHDSSSSLNTMESNIEKVNGLFPNDNSVIALKPNEEKLNS----------------------S---------------LSVENNDSTYTDATLIAPKIGLDRPNINAITIDVDGHSLQNEISSSTD-KLSPSQSDALFEQKQDSLFWNDNAVIVVSDSESDDNNVRTKSSLNDHDKVNMKEKRNLE---LAFMNSKRKKLELPSLPVLSTAGPSYTNSLALPPFHHHNNYKMFNTTHTLEDDKFLQGKGTSNN-PISLSDEEDNEINFQNKRYGSDSVILPGGLLHDSKLPEPGKHLFHLQWYHDRFHNIEGFN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSDSNNQKVQDDQQQQLEELF------------------KDLDEQLV-----------------------------------------NDPTIREG-----------------------------TP-AGLIPTLMEHQKEGLMWLKRLEE--------------------------------------------------------------SSKKGGILADDMGLGKTVQALALLVTRPP------------------------------------------------------------------------------------------------------------------------------------------------------------------------ESKSVKTTLIITPVSLLQQWHNEILTK-IAPSHRPTVYIHHGSSKKHK--IAE-----------QLM-------SYDIVLTTYNVIAYEFKNKMAYDKSIEDNAPIK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KFEHLPFFEAEWYRVILDEAQTIKNRNTLAARGCCLLES-TYRWCLSGTPMQNGVEEFYSLIKFLRIKPY-SDW-----------------------------------SSFSKDFTIPLSSN-----INTSA---PMKRF--RGLLK-AVLLR-RTKNTKID--GK----PILTLPPKTAVKSETDLSSSEMEFYNTLQSGAQIQMRKYLQEGTITTHYGSLLVLLLRLRQACCHPWLIVA-REAAVDDNDSFQAKNRAIYNQ------------------------------------IYPEAVNRL--------KLIETLQCSLCMDVVA--ELLI--------IVPCGHFLCRECLTHVITSSEDMAKQTSNEN--------------------------------------------------------------------------------------------IS------------PKCSV--C-EEYIDTERLLSYALFR------------------------------------------------------RYSGMAPIVDADNKLRTENISELLPKQYSNILENRQMGMKIFTDPKHWTTSTKIEKALNAVKEI----------------------------------------------------IKKQPT-----DKILIFSQFVSFLELFTVPFR-------QEGIKYLMYTGGLSTAERNQALINFEVDPNV------------------------------------RVLLISLKAGNVGLNLTCANHVIILDPFWNPYIEEQAVDRAHRIGQDKPVNILRIVTNNTIEERVLAL-------------QDR--KRELID--------------------------------SALG--EK---GLREISRLNTKELSFL-------------------------------------------------------------------------------------------------------------------------------------------FGMSSR----------   [1040]
'gi|68073367|ref|XP 678598.1| DNA repair protein rhp16 [Plasmodium berghei strain ANKA] >gi|56499117|emb|CAH97553.1| DNA repair'     --------------------------------------------------------M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DNSLDKLFSKQERLYKEIIEANCFYVNKLNEWIGDKYVKKLKLKKDDIALTPKLLINRAQSKASRCRVCGLCIEKKSLRIGYPSKDPRGNY----------------------GYISCWVHLDCSKKILYAVLYVEENKECLKKYLTNSEEITCTSDH-NNYEQFIHKNIKWEIFFGHYDELDDEEKEKLKDITKPYDAKDYEDGKNSFEIL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IKKEKYIAFSN------------------NLMKTEKK-----------------------------------------QIINCELN-----------------------------VP-KELKFELLKYQKEGVSWMINQEN--------------------------------------------------------------SKHKGGILADEMGMGKTIQAITLILCQKINRM---------------------ENSEKGIKEIKE------------VKENIKDENTNVCIKKEQNSITNYTNNMDDNSNLVTTQIKVKEEGSEKSIILIESDENRCFGMKRKSKYFSKSEKNKKN------------------KKGNSKNNSNKVKTGKSFKNNNSEKELHGQTLIIAPIAAVMQWKSEIEKF-VEKD-FLKVYIFHGNYKKI---SSK-----------ELL-------EYDVVITSYAMVEVNFRKIINKHKVACEYCGRLYLPSTLVIHQKYFCGPNAVRTEKLKKRKKKNKDTALVAMKKFDDHFVPTPKNVFLEILNENKENIKDHKNIKMELRKGDEKLDKIKNNKITNKNVPFEEN-------KLIVLSSKESQSDSSESKKSIFSPLLRKTSSRVIDLCNVGFEKEAIEKSIEDIYKKKKKK-----------------------IQWNIVIKYVLKNHLYSIDMNDKCKNVLVEIYLSNNNIEDHELKSLNMGELKVLLITMGKHVFGTKIELINRVLVSAKYIRHELEEEVKKIEDNNKKKMKKGNKNSKSMIKKGSKKSSIDLNSYRNSNYEHTSSGD-----------DKKEMIMIKLKRKIDTGKSNRKRRKTIGICAITKRENIDDINNKIK------KEQKNNSKFSKQCRKKRKKYSSESSKNSNGEHFSIRSSPRLAAKS--------SGGLSSKGSGRLSAKFSGGFSSKGSDKRVAKSSDDSSVNYLGSEIGDSSE-------------SIYEESENSSDSVMSYDSIIIEKNKI--KKKKMKKKGSD----------------------------------IFDESILHLIEWNRIILDEAHRIKNRIASTSQSIFNLKCSGYRWCLTGTPLQNRIGELYSLIRFLEFYPY-AYYFCSKKDCKCSLINFE--MKDNKYCSICGHTRMCHFNYFNKRILKPIQSFGYN--GEGVN---SMFYL-RNEILD-EILLR-RTKNEREKD---------IKLKPLIVTIRKDKLSNEEKDFYESLYKKTTTQFDKYVKSNTVLHNYAHIFDLLSRLRQAADHPYLILF-GNSFLSDPSGKFIKKNSA---------------------------------------IIPAISN--------------DFVCGICLE-NVPRKNNV--------NTKCNHHFHKDCLKQYIESFEIENKENTDNE-------NFSITKYKTYNI-----VSNCSDSEKC-----------DHKNMIVFGNDDK-NEGK----NNFELNRSYKSLSVVKFKDRENSQFVNLTNNVENIKDHPLGCPV--C-YVPLTVDFNAFAN-----------------------------------------------------EEEKIDDEEIIVCKEEVTHINKSFINRI-N---TD---------------EYQTSTKIEAIFEEVRNV----------------------------------------------------I-YNTD-----DKCLIFSQYCSMLDLIEYHLK-------KNNIICSKLLGYMSMVSRNNILYNFNNDNQL------------------------------------RVLLISLKAGGEGLNLQVANRIFIVDPWWNPAAELQAIQRAHRIGQTKTVYAIRFIIENTVEEKIIQL-------------QNK--KQLVFD--------------------------------CTIG--NS---GS-AMQKLTKEDLAFL-------------------------------------------------------------------------------------------------------------------------------------------FHA-------------   [1545]
'gi|50928929|ref|XP 473992.1| OSJNBa0089N06.14 [Oryza sativa (japonica cultivar-group)] >gi|39546244|emb|CAE04253.3| OSJNBa0089N'    --------------------------------------------------------M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DIIDLCSDSEEYFSPYSDTEDNLDFDDPNDGVNQVVLHNTAFGNNSSELLVGLDDDNWLNNTHALS---------------------------------------------------------------SHRPAENRSDIIESSSGVNTDCQNSAWQYRTLP----------------------------------------------------HTFMSSSYKSRPLSLTGGNNVESTHPTVKPNTVHY--NGIG-FPSPAIASGYKPYVSYGQGVSIDDDDDDVYEVLHQPFPFSHSSLGDKKIEEESTWKYNG---FQTSSAYGIEMPTSAM-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------STGGVSAYGGLNSH------RIFPPSVPYNNSV----------------NNFGVNG-------------LGTQSHLNIEKRLFG-----------------------------------------------------------RDERVVYDEAL------------------KQI----------------------------------------------SQETTEEN-----------------------------LPEGVMSVSLLKHQRIALAWMVSREN-------------------------------------------------------------SSHCSGGILADDQGLGKTISTIALIQKERVEQSKFMSADVGSMKSVA-NLDEDDEVVIVMDKKQLKGESVNMLQDSTLFPSSEAASD--AADLKPWASLPGSAVDRMVNAVKVEPKKKARVR-------------------------------------------------------------------PSPSSTLRSANRSTAGTLVVCPASVLRQWASELAAKVTESS-KLSVLVYHGGSRTK---DPT-----------ELT-------KYDVVVTTYTIVANEVPKQNFDEDME---EKNSETYG-LCPAFSIGNKRK------KDSEPKKKKKPKNSDAD-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LDGGPLARVRWFRVVLDEAQTIKNHNTQVARACCGLRA-KRRWCLSGTPIQNTIDDLYSYFRFLKYEPY-SVY-----------------------------------GSFRSMIKYQISR-------DATR---GYKKL--QAVLK-IVLLR-RTKETLID--GE----PIIKLPPKTIQLSKIDFSKEERTFYMMLEEGSREKFKEYASAGTIRENFANILVLLLRLRQACDHPLLLKG-KEKDLIDTGSVEVANKLPKE-------------------------------------TVINLLGQL---------EGDYAICSRCSD-PP--EDVV--------VATCGHVFCYQCVHKSLTSDEN--------------------------------------------------------------------------------------------------------------------VCPSPSC-GKKLSAQTVFSPGVLR------FC---IADKLESG----------------------------------------------------------------ATTSSSVEADGSPSICESSYISSKIRATTDILNSIVNT-------------------------------------PALTWSDTMESSPSEVAP-----SKAIVFSQWTGLLDLLELSLD-------SSRIKFRRLDGAMSLNLREAAVREFNTDPEV------------------------------------RVMLMSLKAGNLGLNMVAACHVIMIDPWWNPYAEDQAVDRAHRIGQTRPVTVSRLTIKDTVEDRILAL-------------QEK--KRKMVQ--------------------------------SAFG--EDK--PGGSATRLTIDDLQYL-------------------------------------------------------------------------------------------------------------------------------------------FGI-------------   [1051]
'gi|2443887|gb|AAB71480.1| Similar to transcription factor gb|Z46606|1658307 and others [Arabidopsis thaliana]'                      --------------------------------------------------------M--------GEEGSMFGLGGEFPVDDCDGGFEFEDDDETIDIETLYRILDEKPDSAEV----VFSAFVGSQENLSPVGSSADELKDSQLL--------------------------------------------------------------NGSFDEHVKMEAGLSPSPAHTCSASLK---------DWFSLSQGEQPVETCGVSQSEMTSCSISSSFSDPDGNMMAFNPVNCDVDTVSKQDDKIIDSKSMLTPYFDNVTGYGVGLGANHNSSAMSV-------FFNNSNSLSDSADNY-------VSSAQDCYNTSGTSLSD--------------------------------------------------------------------------------------HTPNSVQNFAFEFFP-NKEE-AVNDVESGVSESQSDGASRMIFDRHGRVDNGSL---ERKPPIDFSSA-----------------RGISFKFESNPSVSPACVKPYNSFDSHLADSDLDRPNNYSCSFQDNKTVHVKVKPEAESEKV-VYSSVPGEFSVRDDAYLSGETNRWWSGASSSAVSYQTDIEKGYSYMAPQTALPSQDSGKISSNHFYDSDTCLQYVVEDPSPVTQNNEYKDFQIQQGDREYIQPRGIDSQFSNASFESVQSHSSECISDSD--------------DDSDVCIIEPYGQS------AIPHRPLAMKMPV----------------VSSEYST-----------VSHNFNQ--SGGLKLQS-----------------------------------------------------------NKENMIFQAAL------------------QDL----------------------------------------------TQPNSEAI-----------------------------LPDGVLTVPLLRHQRIALSWMAQKET------------------------------------------------------------SGFPCSGGILADDQGLGKTVSTIALILKERS---KPAQACEESTKKEIFDLESETGE---------------------------------CAPLKPSGRSKHFEH-------SQLLSNENKV---------------------------------------------------------------------GGDSVGKVTGRPAAGTLVVCPTSVMRQWADELHKKVTSEA-NLSVLVYHGSSRTK---DPH-----------ELA-------KYDVVVTTFSIVSMEVPKQPLVDDEDEE-KDGVHDGGTAATGFCSNKKR-------KYPPDSKKKGSKKKKVE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLSGPLAKVSWFRVVLDEAQSIKNYKTQVARACWGLRA-KRRWCLSGTPIQNSIDDLYSYFRFLKYDPY-SSY-----------------------------------VLFCSTIKNPITR-------NPVK---GYQKL--QAILK-TVMLR-RTKGSLLD--GK----PIISLPPKSIELRKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLLVNG-EYS-FTWESSVGLAKK----------------------------------------------QIQS---------DASLAICGICND-AP--EDAV--------ASVCGHVFCKQCIYERLTGDSN--------------------------------------------------------------------------------------------------------------------HCPFANC-NVRLTISSLSSKTRLD------DA---MPDMQERA----------------------------------------------------------------TSNSLS-----PCSDEDLPYGSSKIKAALEILQSLPKAHD--LTDSNQISENREYSGL---------------SITPVKNEGMSVDVPIKVAG-----EKAIVFSQWTKMLNLLEASLV-------SSHIQYRRLDGTMSVAARDKAVQDFNTLPEV------------------------------------TVMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVEDRILAL-------------QVC-----------------------------------------------------------ELVDLVLFNFSISF-----------------------------------------------------------------------------------------------------------------------------------KPFHF-------------   [1272]
'gi|23509180|ref|NP 701848.1| DNA repair protein rhp16, putative [Plasmodium falciparum 3D7] >gi|23497022|gb|AAN36572.1| DNA rep'    --------------------------------------------------------M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKKIDELFSKKERYLKEIIESNCIYVKDLNHWVGTNYIARLKLKKELLKVTPKLLINKTRSRASRCRVCGFSIEKDNLRIGYPTKDPRGDY----------------------GYISCWVHIECSKKILYSCLYIEENENVLKGYLHEYKNHNCSGEHYNKYEIYIYNNLQWDLFFGGIENINEEELSKLKEMAKPYEIKNDLKCRNSFEML--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------INEENEKINSL------------------DYLNVEKK------------------------------------------ITNYNLI-----------------------------IP-KELKYDLLQYQKEGIYWMINQEM--------------------------------------------------------------SNVKGGILADEMGMGKTIQAITLILCQKLNKLKEIKKDERSDDHDKVGYKNDDEEDEKKKKKKKSHMLHGDIYKEDILSFEERDTKHEKSIKEIDIKKSYKNSSSILYCKNSTSDDLKVKEESDCSVILIESDDTQNEKMNHKNDVMAENKIDTENVLNVKKIKNIKKECVNNKKIKNNNNNNNK----SNFKKNDFINKLKGQTLIIAPVAAVMQWKSEIEKF-VDEN-ILNVYVYHGNSKII---SDE-----------ELI-------KYDIVITSYAVVEVNFRKIVNKHKQPCEYCGRLYLPNNLDIHKKYFCGPTAVRTEKLKKRKKKNKDTALVAMKKFDETFVPTPRNVLLEIMANSKKELEDEKKKNIEISNKSLNHNNTKKNKGKKNNQIKQRNAQKDSNIDVIVLSSDSCKEKSSSSENSVYSPLSRKTSSRIIDLSNLGFDKETMEQVIESLSEGGKKKKNVKNVKNVNSVKNVKSVKNHRDVKWNVVIKNMLENFLYNVDMNDKCKHVLIKIYVTNTTIQNTELEKLNMGELKVVLITMGKHIFGTKVELINRILVSAKYIRKELYDENTETEE-------------------------------KDTSGVHNEDGDTSMGVTNQKGKDKFCKERKIKKE--DEKSSIEKKRKTVDVISVGGDVKRDMSLNKRRNTTNRGTTMKIKGETREYASNKGKNNNDDDNNNSYYSDAKSYTSESSDESYQGDICSKKKEPKKNTKSIRRSQRKSYCKSS-----LESEKKEESDNSYNTNDYNDCDDCDDCDDYNNCDDNNYCDDCDDSSNSFDSYDSIIVRKSKM--SKEKKKRENMK----------------------------------IFDESALHQIYWNRIILDEAHRIKNRNTSTTQSILNLKCCGYRWCLTGTPLQNRISELYSLIRFIEFYPY-AYYFCSKKDCKCLLLNYE--MRDNKYCYFCNHSRINHFNYFNKRILKPIQSFGYR--GEGLS---GMSYL-KNEVLD-KILLR-RTKGERKSD---------INLKPLIIKIRKDKLSKEEKDFYESLYKQTSTQFNTYVNSNTVLHNYAHIFDLLSRLRQAADHPYLIIF-GNSFLSDPSGKFIKKNTT---------------------------------------IIPAISN--------------DYVCGICLE-NVQKRNNI--------STKCNHNFHKSCLKQYIESFEMENADQQEEEKEDSNFKNSNMIKYNTYDIGQREGMNNVKSTNSCKYDIVINDDIHNNINKLETHENDNLITSKDLLKNKKSLEKKSKSISVVKFKNKDG--YINLLSNDENVKDYPLGCPV--C-YIPLTVDFNLLVD-----------------------------------------------------KEEN-EEDEIIICKEETTYINKSFINRI-N---TQ---------------EYRSSTKIEAVYEEVQNV----------------------------------------------------I-NNTD-----DKCLIFSQYCSMLDLIEYHLK-------KHNIVCSKLLGYMSMISRNNILYNFNQDKQL------------------------------------RVLLISLKAGGEGLNLQVANRIFIVDPWWNPAAELQAIQRAHRIGQTKTVYAIRFIIENTVEEKIIQL-------------QNK--KQLVFD--------------------------------STIG--DS---GN-AMQKLSKEDLAFL-------------------------------------------------------------------------------------------------------------------------------------------FHS-------------   [1647]
'gi|46111685|ref|XP 382900.1| hypothetical protein FG02724.1 [Gibberella zeae PH-1] >gi|85540718|sp|Q4IJ84|RAD5 GIBZE DNA repair'    MEQPLGDMSPWHPDNH----------------------------------------M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D----PEPPTKRRRFL---ADP--DEA----SSDPVAHDSSPLPP----------------S-------KRFFENE--------D--ETVP--------------KTERLETID--------------------------------EKPN--------NASPKSSSTELPTSQQEPSP---------SFDQETFETFIGDKVSEDVLSAIRSNCGNNIERAVNMYFDGTYKKFMKK-ST---------------RPAPPRPAASSSR---TPNVSGERTIPIQTSKR-----MP--NERYIGAFGV--EGWATRSGTNLLKHGDIVKIERQKRA-PPP---------------------TKSKGK-----AGPVTPSR--GFGAPRRQDVVVRFTTQS-GTEVGRL----AREAANWVSALIDEKICRFEGTVVYAPERLRTNDTIFLQLRCSLLNS--AFFSRPF--QLADDRSAAFFNQNETNDEKTLRMRQVALV-KLFQEINLHPTLT----------------N-SATKD-----GRKGLLQAAEQDEEKQKE-VKKSDGNGT--------------------------NNTKEANSSQSSDTEDGE----------ELEQDQLDALY------------------KKAQSFDF-------------------------------------------NTPEAE-----------------------------PA-DTFAMTLRKYQKQALHWMMAKEKDEKSH-REPLMHPLWEQYEWPLKDVDENDLPQI------EGQSKFYVNPYSGDLSLDFPVQEQHCLGGILADEMGLGKTIQMLSLVHTHRSEVALEARQSVVARSNVNQLTR------------------------------------------------------------------------------------------------------------------------------------------LG--KNSESILDAPCTTLVVAPMSLLSQWQSEAEKA-SKDG-TMKTELYYGNEKSS---NLQ-----------ALCCASNAANAPDLVITSYGVVLSEFSSLA-ARNGD---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KSFHNGLFSLRFFRIIIDEAHHIKNRSSKTSKACYEISA-THRWALTGTPIVNKLEDLFSLVRFLGVEPW-NNF-----------------------------------SFWRTFITVPFES------GDFMR---ALDVV--QTVLE-PLVLR-RTKDMKTPD-GE----PLVLLPPKQIEIVNVELSETERDVYNYIFNKAKRTFSQNVEAGTVMKAFTTIFAQILRLRQSCCHPILVRN-RDIVADEVEAGAAADAAAGLADDMDLESLITSFTAVTDKASK-----ESNQT-----FGAHALEQI--------RDEAENECPLCFEEPM--NDQT--------VTGCWHSACKKCLLDYIKHQTDKAEV---------------------------------------------------------------------------------------------------------------PRCFS--C-REPINKRDLFEVVRHDDDS--DMM-----------------------------------------------------------SKKPRISLQRVG---------------------VNASSAKVVALMSELRAL----------------------------------------------------RREHPK-----MKSVVFSQFTSFLSLIEPALT-------RANIKFLRLDGSMAQKARAAVLNEFTEKKGF------------------------------------TILLLSLRAGGVGLNLTSAGRVFMMDPWWSFAVEAQAIDRVHRMGQEAEVQVKRFVVKESVEERMLKV-------------QER--KKFIAT---------------------------------SLGMM-----NDEEKKLQRIEDIKEL-------------------------------------------------------------------------------------------------------------------------------------------LS--------------   [1154]
'gi|83772842|dbj|BAE62970.1| unnamed protein product [Aspergillus oryzae]'                                    --------------------------------------------------------M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ESGDINDRPLKRRRFF---VDEEEDTKPSPIDSTAA--SLDASTPRSTHDDEPPVIQSHGVQLGD----AAISVNGEGNGYIRDDDQQTTSYTSPQEREGEISGDTIGQGPTSTIQNGALP----------------------GIQEERV----------------TTENVPAQEDTD---------GFDTEVFISIIGERLSSDTIRKIRSAAGGDLERAINVYFDGSWKSPSGSARNQTTLIS---QPTLSTRSTPVNQT--SMF---GNGPARKGSGAPAD-IAPRNTSQP--SIRYVGAFGV--GAWATRSGVGFIKHGDRVNIERARSQ-PVS---------------------KRGRGG---------------RVFTNNRGDVLTRFTNQA-GQEIGRL----PQETAAWVSTLLDQKVCKLEGVCVFAPDRVRVNDTIYLQLWCYLRIE--AFQSGMLDSSIDDNRSTNIFEEKESTEEKRLRLRQVALV-KLFDEIGLQPTSA----------------NDMTLKH-----KKEGLLRAVEIAEQYDKN-KKENKSN------------------------------------NDSSEDEESP----------ELEEGQLDTLY------------------KKAQTFDF-------------------------------------------SMPEAD-----------------------------PP-PTFSLSLRKYQKQALHWMLAKEKDNKSA-RGPSMNPLWEEYAWPAKDVEDNNLPTI------EGLDHFYVNPYSGELSLDFPAQEQHCLGGILADEMGLGKTIEMLSLVHSHRN---VPPGQAADGPSSVSGLAR------------------------------------------------------------------------------------------------------------------------------------------LP--SSSSGVVPAPYTTLVVAPTSLLSQWESESLKA-SEPG-SMKVLMYYGNEKYV---NLR-----------ELCAAGNPT-APNVIVTSYGVILSEYRQMLSSATFS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAPGGLFSVEFFRVILDEAHLIKNRLSKTARACYELKA-THRWVLTGTPIVNRLEDLFSLVRFLKVEPW-NNF-----------------------------------SFWKTFITVPFES------KDYVR---ALNVV--QTVLE-PLVLR-RTKTMKTPE-GE----PLVPLPRRTITIEEVELPEQEREIYDYIYTRAKRTFNDNIEAGTLLKSFTTIFAQILRLRQTCCHPILTRN-KTIVADEEDAAAAANDGNGFKDDMDLQELIDRFTTTTESADS-NQGQESSNK-----FTTYALKQI--------QNESSGECPICSEEPM--IDPA--------VTTCWHSACKKCLEDYIRHQQDKGDS---------------------------------------------------------------------------------------------------------------PRCFS--C-RAPISSRDIFEVIRHQSPTTTPTE---------------------------------------N--------DLYSSTPPSSTQPAPRISLRRINP-----------------LSPSAHTSAKIHSLINHLH-------------------------------------------------------RVPSN-----TKSVVFSQFTSFLDLIAPQLD-------KAGITYVRLDGTMAQKARAEVLAQFNKTETFDQEEIEDAEREDDINSPFTRKPLPTRNGHASASPSPRVLLISLRAGGVGLNLTAASNVFMMDPWWSFAIEAQAIDRVHRMGQLRDVAVTRFVVKDSIEARMLRV-------------QER--KMNIAG---------------------------------SLGLRVGG--DGNEDKKERIEDIKML-------------------------------------------------------------------------------------------------------------------------------------------FE--------------   [1246]
'gi|27882409|gb|AAH44659.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a3 [Homo sapiens]'              -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPRFEFQDVIPPDDFLTSDEEVDS-----------------------------------------------------------VLFGSLRG--HVVGLRYYTGVVNNNEMVALQRDPNN-PYD--------------------------------------------------KNAIKVNNVN-GNQVGHL----KKELAGALAYIMDNKLAQIEGVVPFGANN---AFTMPLHMTFWGKEE-----------------------NRKAVSDQLKK-----------HGFKLGPAPK----------------TLGFNLE-----SGWGSGRAGPSYSMPVHAAVQMTT----------------------------------------------------------EQLKTEFDKLF------------------EDLKEDDK--------------------------------------------THEME-----------------------------PA-EAIETPLLPHQKQALAWMVSREN-------SKELPPFWEQ------------------------RNDLYYNTITNFSEKDRP---ENVHGGILADDMGLGKTLTAIAVILTNFH--DGRPLPIERVKKNLLKKEYNVNDDSMKLGGNNTSEKADGLSKDASRCSEQPSISDIKEKSKFRMSELSSSRPKRRKTA-VQYIESSDSEEIETSELPQKMKGKLKNVQSETKGRAK-GSSKVIEDVAFACALTSSVPTTKKKMLKKGAC--------AVEGSKKTDVEERPRTTLIICPLSVLSNWIDQFGQH-IKSDVHLNFYVYYGPDRIR---EPA-----------LLS-------KQDIVLTTYNILTHDYG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLES-ERRWVLTGTPIQNSLKDLWSLLSFLKLKPF-IDR-----------------------------------EWWHRTIQRPVTM------GD-EG---GLRRL--QSLIK-NITLR-RTKTSKIK--GK----PVLELPERKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTYLLTN-AVSSNGPSGN--------------------------------------DTPEELRKKLIRKMKLIL--------SSGSDEECAICLD-SL--TVPV--------ITHCAHVFCKPCICQVIQNEQPH------------------------------------------------------------------------------------------------------------------AKCPL--C-RNDIHEDNLLEC--------------------------------------------------------------------------PPEELARDSE---------------KKSDMEWTSSSKINALMHALTDL----------------------------------------------------RKKNPN-----IKSLVVSQFTTFLSLIEIPLK-------ASGFVFTRLDGSMAQKKRVESIQCFQNTEAG----------------------------------SPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKI-------------QNK--KRELAA--------------------------------GAFG--TKKP-NADEMKQAKINEIRTL-------------------------------------------------------------------------------------------------------------------------------------------IDL-------------   [1008]
'gi|21071054|ref|NP 620636.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a3 [Homo sapiens] >gi|210'    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPRFEFQDVIPPDDFLTSDEEVDS-----------------------------------------------------------VLFGSLRG--HVVGLRYYTGVVNNNEMVALQRDPNN-PYD--------------------------------------------------KNAIKVNNVN-GNQVGHL----KKELAGALAYIMDNKLAQIEGVVPFGANN---AFTMPLHMTFWGKEE-----------------------NRKAVSDQLKK-----------HGFKLGPAPK----------------TLGFNLE-----SGWGSGRAGPSYSMPVHAAVQMTT----------------------------------------------------------EQLKTEFDKLF------------------EDLKEDDK--------------------------------------------THEME-----------------------------PA-EAIETPLLPHQKQALAWMVSREN-------SKELPPFWEQ------------------------RNDLYYNTITNFSEKDRP---ENVHGGILADDMGLGKTLTAIAVILTNFH--DGRPLPIERVKKNLLKKEYNVNDDSMKLGGNNTSEKADGLSKDASRCSEQPSISDIKEKSKFRMSELSSSRPKRRKTA-VQYIESSDSEEIETSELPQKMKGKLKNVQSETKGRAKAGSSKVIEDVAFACALTSSVPTTKKKMLKKGAC--------AVEGSKKTDVEERPRTTLIICPLSVLSNWIDQFGQH-IKSDVHLNFYVYYGPDRIR---EPA-----------LLS-------KQDIVLTTYNILTHDYG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLES-ERRWVLTGTPIQNSLKDLWSLLSFLKLKPF-IDR-----------------------------------EWWHRTIQRPVTM------GD-EG---GLRRL--QSLIK-NITLR-RTKTSKIK--GK----PVLELPERKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTYLLTN-AVSSNGPSGN--------------------------------------DTPEELRKKLIRKMKLIL--------SSGSDEECAICLD-SL--TVPV--------ITHCAHVFCKPCICQVIQNEQPH------------------------------------------------------------------------------------------------------------------AKCPL--C-RNDIHEDNLLEC--------------------------------------------------------------------------PPEELARDSE---------------KKSDMEWTSSSKINALMHALTDL----------------------------------------------------RKKNPN-----IKSLVVSQFTTFLSLIEIPLK-------ASGFVFTRLDGSMAQKKRVESIQCFQNTEAG----------------------------------SPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKI-------------QNK--KRELAA--------------------------------GAFG--TKKP-NADEMKQAKINEIRTL-------------------------------------------------------------------------------------------------------------------------------------------IDL-------------   [1009]
gi|531196|gb|AAA67436.1|_ATPase                                    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPRFEFQDVIPPDDFLTSDEEVDS-----------------------------------------------------------VLFGSLRG--HVVGLRYYTGVVNNNEMVALQRDPNN-PYD--------------------------------------------------KNAIKVNNVN-GNQVGHL----KKELAGALAYIMDNKLAQIEGVVPFGANN---AFTMPLHMTFWGKEE-----------------------NRKAVSDQLKK-----------HGFKLGPAPK----------------TLGFNLE-----SGWGSGRAGPSYSMPVHAAVQMTT----------------------------------------------------------EQLKTEFDKLF------------------EDLKEDDK--------------------------------------------THEME-----------------------------PA-EAIETPLLPHQKQALAWMVSREN-------SKELPPFWEQ------------------------RNDLYYNTITNFSEKDRP---ENVHGGILADDMGLGKTLTAIAVILTNFH--DGRPLPIERVKKNLLKKEYNVNDDSMKLGGNNTSEKADGLSKDASRCSEQPSISDIKEKSKFRMSELSTSRPKRRKTA-VQYIESSDSEEIETSELPQKMKGKLKNVQSETKGRAKAGSSKVIEDVAFACALTSSVPTTKKKMLKKGAC--------AVEGSKKTDVEERPRTTLIICPLSVLSNWIDQFGQH-IKSDVHLNFYVYYGPDRIR---EPA-----------LLS-------KQDIVLTTYNILTHDYG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLES-ERRWVLTGTPIQNSLKDLWSLLSFLKLKPF-IDR-----------------------------------EWWHRTIQRPVTM------GD-EG---GLRRL--QSLIK-NITLR-RTKTSKIK--GK----PVLELPERKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTYLLTN-AVSSNGPSGN--------------------------------------DTPEELRKKLIRKMKLIL--------SSGSDEECAICLD-SL--TVPV--------ITHCAHVFCKPCICQVIQNEQPH------------------------------------------------------------------------------------------------------------------AKCPL--C-RNDIHEDNLLEC--------------------------------------------------------------------------PPEELARDSE---------------KKSDMEWTSSSKINALMHALTDL----------------------------------------------------RKKNPN-----IKSLVVSQFTTFLSLIEIPLK-------ASGFVFTRLDGSMAQKKRVESIQCFQNTEAG----------------------------------SPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKI-------------QNK--KRELAA--------------------------------GAFG--TKKP-NADEMKQAKINEIRTL-------------------------------------------------------------------------------------------------------------------------------------------IDL-------------   [1009]
'gi|34785644|gb|AAH57116.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3, i'    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSYTFTRGPVWKYSQSVQYGSHENIPRLSYSTFLPHFEFQDIIPPDDFLTSDEEQDL-----------------------------------------------------------VLFGTMRG--QVVGLRYYTGVVNNNEMVALQREPNN-PYD--------------------------------------------------KNAIKVNNVN-GNQVGHI----KREIAAAVAYIMDNKLAQVEGVVPFGASN---TFTMPLYMTFWGKEE-----------------------NRNVVLEQLKK-----------HGFKLGPTPK----------------TLGSSLE-----NAWGSGRAGPSYSRPAHVAVQMTT----------------------------------------------------------DQLKTEFDKLF------------------EDLKEDDR--------------------------------------------TVEME-----------------------------PA-EAIETPLLPHQKQALAWMIAREN-------SKELPPFWEQ------------------------RNDLYYNTITNFSVKERP---ENVHGGILADDMGLGKTLTAIAVILTNFD--DGRPLLSKRGKKNHPGKEY--KDETIKRRGSNMDKKEDGHS-ESSTCGEEPSISGTPEKSSCTLSQLSSVCPKRRKIS-VQYIESSDSEEIETSELPQKMKGKLKNVQLNTKSRVK-GSSKVKEDSKF--ALTFFASATQRKMLKKGMS--------MMECSEACDTGERTRATLIICPLSVLSNWIDQFGQH-VKSEVHLNFYVYYGPDRIR---DSA-----------WLS-------KQDIILTTYNILTHDYG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKDDSPLHSIKWLRVILDEGHAIRNPNAQQTKAVLELEA-ERRWVLTGTPIQNSLKDLWSLLSFLKLKPF-IDR-----------------------------------EWWYRIIQRPVTT------GD-EG---GLRRL--QSLIK-NITLR-RTKTSKIK--GK----PVLELPERKVFIQHITLSEEERKIYQSVKNEGKAAIGRYFTEGTVLAHYADVLGLLLRLRQICCHTHLLTN-GMSSSGPSRS--------------------------------------DTPEELRKMLIEKMKIIL--------SSGSDEECAICLD-SL--TFPV--------ITHCAHVFCKPCICQVIHSEQPH------------------------------------------------------------------------------------------------------------------AKCPL--C-RNEIHGDNLLEC--------------------------------------------------------------------------PPEELACDSD---------------KESSMEWKSSSKINALMHALIEL----------------------------------------------------RTKDPN-----IKSLVVSQFTTFLSLIETPLK-------ASGFVFTRLDGSMAQKKRVESIQRFQNTEAG----------------------------------SPTIMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKI-------------QNT--KRDLAA--------------------------------GAFG--TKKT-DANDMKQAKINEIRTL-------------------------------------------------------------------------------------------------------------------------------------------IDL-------------   [1003]
'gi|62087684|dbj|BAD92289.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a3 variant [Homo sapiens]'     -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPRFEFQDVIPPDDFLTSDEEVDS-----------------------------------------------------------VLFGSLRG--HVVGLRYYTGVVNNNEMVALQRDPNN-PYD--------------------------------------------------KNAIKVNNVN-GNQVGHL----KKELAGALAYIMDNKLAQIEGVVPFGANN---AFTMPLHMTFWGKEE-----------------------NRKAVSDQLKK-----------HGFKLGPAPK----------------TLGFNLE-----SGWGSGRAGPSYSMPVHAAVQMTT----------------------------------------------------------EQLKTEFDKLF------------------EDLKEDDK--------------------------------------------THEME-----------------------------PA-EAIETPLLPHQKQALAWMVSREN-------SKELPPFWEQ------------------------RNDLYYNTITNFSEKDRP---ENVHGGILADDMGLGKTLTAIAVILTNFH--DGRPLPIERVKKNLLKKEYNVNDDSMKLGGNNTSEKADGLSKDASRCSEQPSISDIKEKSKFRMSELSSSRPKRRKTA-VQYIESSDSEEIETSELPQKMKGKLKNVQSETKGRAKAGSSKVIEDVAFACALTSSVPTTKKKMLKKGAC--------AVEGSKKTDVEERPRTTLIICPLSVLSNWIDQFGQH-IKSDVHLNFYVYYGPDRIR---EPA-----------LLS-------KQDIVLTTYNILTHDYG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLES-ERRWVLTGTPIQNSLKDLWSLLSFLKLKPF-IDR-----------------------------------EWWHRTIQRPVTM------GD-EG---GLRRL--QSLIK-NITLR-RTKTSKIK--GK----PVLELPERKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTYLLTN-AVSSNGPSGN--------------------------------------DTPEELRKKLIRKMKLIL--------SSGSDEECAICLD-SL--TVPV--------ITHCAHVFCKPCICQVIQNEQPH------------------------------------------------------------------------------------------------------------------AKCPL--C-RNDIHEDNLLEC--------------------------------------------------------------------------PPEELARDSE---------------KKSDMEWTSSSKINALMHALTDL----------------------------------------------------RKKNPN-----IKSLVVSQFTTFLSLIEIPLK-------ASGFVFTRLDGSMAQKKRVESIQCFQNTEAG----------------------------------SPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKI-------------QNK--KRELAA--------------------------------GAFG--TKKT-KC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [992]
'gi|16943790|emb|CAD10805.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3 ['    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPRFEFQDVIPPDDFLTSDEEVDS-----------------------------------------------------------VLFGSLRG--HVVGLRYYTGVVNNNEMVALQRDPNN-PYD--------------------------------------------------KNAIKVNNVN-GNQVGHL----KKELAGALAYIMDNKLAQIEGVVPFGANN---AFTMPLHMTFWGKEE-----------------------NRKAVSDQLKK-----------HGFKLGPAPK----------------TLGFNLE-----SGWGSGRAGPSYSMPVHAAVQMTT----------------------------------------------------------EQLKTEFDKLF------------------EDLKEDDK--------------------------------------------THEME-----------------------------PA-EAIETPLLPHQKQALAWMVSREN-------SKELPPFWEQ------------------------RNDLYYNTITNFSEKDRP---ENVHGGILADDMGLGKTLTAIAVILTNFH--DGRPLPIERVKKNLLKKEYNVNDGSMKLGGNNTSEKADGLSKDASRCSEQPSISDIKEKSKFRMSELSSSRPKRRKTA-VQYIESSDSEEIETSELPQKMKGKLKNVQSETKGRAKAGSSKVIEDVAFACALTSSVPTTKKKMLKKGAC--------AVEGSKKTDVEERPRTTLIICPLSVLSNWIDQFGQH-IKSDVHLNFYVYYGPDRIR---EPA-----------LLS-------KQDIVLTTYNILTHDYG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLES-ERRWVLTGTPIQNSLKDLWSLLSFLKLKPF-IDR-----------------------------------EWWHRTIQRPVTM------GD-EG---GLRRL--QSLIK-NITLR-RTKTSKIK--GK----PVLELPERKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTYLLTN-AVSSNGPSGN--------------------------------------DTPEELRKKLIRKMKLIL--------SSGSDEECAICLD-SL--TVPV--------ITHCAHVFCKPCICQVIQNEQPH------------------------------------------------------------------------------------------------------------------AKCPL--C-RNDIHEDNLLEC--------------------------------------------------------------------------PPEELARDSE---------------KKSDMEWTSSSKINALMHALTDL----------------------------------------------------RKKNPN-----IKSLVVSQFTTFLSLIEIPLK-------ASGFVFTRLDGSMAQKKRVESIQCFQNTEAG----------------------------------SPTIMLLSLRAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKI-------------QNK--KRELAA--------------------------------GAFG--TKKP-NADEMKQAKINEIRTL-------------------------------------------------------------------------------------------------------------------------------------------IDL-------------   [1009]
'gi|1658307|emb|CAA86572.1| helicase-like transcription factor [Homo sapiens]'                                    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDNKLAQIEGVVPFGANN---AFTMPLHMTFWGKEE-----------------------NRKAVSDQLKK-----------HGFKLGPAPK----------------TLGFNLE-----SGWGSGRAGPSYSMPVHAAVQMTT----------------------------------------------------------EQLKTEFDKLF------------------EDLKEDDK--------------------------------------------THEME-----------------------------PA-EAIETPLLPHQKQALAWMVSREN-------SKELPPFWEQ------------------------RNDLYYNTITNFSEKDRP---ENVHGGILADDMGLGKTLTAIAVILTNFH--DGRPLPIERVKKNLLKKEYNVNDGSMKLGGNNTSEKADGLSKDASRCSEQPSISDIKEKSKFRMSELSSSRPKRRKTA-VQYIESSDSEEIETSELPQKMKGKLKNVQSETKGRAKAGSSKVIEDVAFACALTSSVPTTKKKMLKKGAC--------AVEGSKKTDVEERPRTTLIICPLSVLSNWIDQFGQH-IKSDVHLNFYVYYGPDRIR---EPA-----------LLS-------KQDIVLTTYNILTHDYG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLES-ERRWVLTGTPIQNSLKDLWSLLSFLKLKPF-IDR-----------------------------------EWWHRTIQRPVTM------GD-EG---GLRRL--QSLIK-NITLR-RTKTSKIK--GK----PVLELPERKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTYLLTN-AVSSNGPSGN--------------------------------------DTPEELRKKLIRKMKLIL--------SSGSDEECAICLD-SL--TVPV--------ITHCAHVFCKPCICQVIQNEQPH------------------------------------------------------------------------------------------------------------------AKCPL--C-RNDIHEDNLLEC--------------------------------------------------------------------------PPEELARDSE---------------KKSDMEWTSSSKINALMHALTDL----------------------------------------------------RKKNPN-----IKSLVVSQFTTFLSLIEIPLK-------ASGFVFTRLDGSMAQKKRVESIQCFQNTEAG----------------------------------SPTIMLLSLRAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKI-------------QNK--KRELAA--------------------------------GAFG--TKKP-NADEMKQAKINEIRTL-------------------------------------------------------------------------------------------------------------------------------------------IDL-------------   [887]
'gi|73990698|ref|XP 534300.2| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a3'     --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNQFRYRRSKRVARGQAPEVHRGKPREVTRGLRGSGTRAARAASDEKTRRRLTPARALLLRRSASARCSLAVGPAGRSTEAARGLAGAPKPSVRQRLSAMSWMFKRDPVWKYLQTVQYGAHGNFPRLSYPTFFPRFEFQDIIPPDDFLTSDEELDS-----------------------------------------------------------ILFGTLRG--HVVGLRYYTGVVNNNEMVALQREPNN-PYD--------------------------------------------------KNAIKVNNVN-GNQVGHL----KKDLAAALAYIMDNKLAQIEGVVPFGANN---AFTMPLHMTFWGKEE-----------------------NRKAVLDQLKK-----------HGFKLGPAPK----------------TLGFSLE-----SSWGSGRAGPSYSMPVHAAVQMTT----------------------------------------------------------EQLKTEFDKLF------------------EDLKEDDK--------------------------------------------THEME-----------------------------PA-EAIETPLLPHQKQALAWMVSREN-------SKDLPPFWEQ------------------------RNDLYYNTITNFSEKDRP---ENVHGGILADDMGLGKTLTAIAVILTNFH--DGKPLPVERIKKNQMKKECNVNDQSMKLGGNNASEKADGLIK-GSRCSGEPSISDVKGKKKYTKSELSSSRPKRRKTA-VQYNESSDSEENETSELPQKMKGKLKNVQSETK-RVKAGSSKVKEDSEFACALISSTPATKRRMLKKGAS--------AVEGSKKTDIEDRPRTTLIICPLSVLSNWIDQFGQH-IKSDVHLNFYVYYGPDRIR---DPA-----------LLS-------KQDIVLTTYNILTHDYG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEA-ERRWVLTGTPIQNSLKDLWSLLSFLKLKPF-LDR-----------------------------------EWWHRTIQRPVTM------GD-EG---GLRRL--QSLIK-NITLR-RTKTSKIK--GK----PVLELPERKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTHLLTN-AGSSSGPSGN--------------------------------------DTPEELRKKLIRKMKLIL--------SSGSDEECAICLD-SL--TVPV--------ITHCAHVFCKPCICQVIQNEQPH------------------------------------------------------------------------------------------------------------------AKCPL--C-RNDIHGDNLLEC--------------------------------------------------------------------------PPEELACDTE---------------KKSNTEWTSSSKINALMHALIDL----------------------------------------------------RKKNPN-----IKSLVVSQFTTFLSLIETPLR-------ASGFVFTRLDGSMAQKKRVESIQCFQNTEAG----------------------------------SPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKI-------------QNT--KRELAA--------------------------------GAFG--TKKT-NANEMKQAKINEIRTL-------------------------------------------------------------------------------------------------------------------------------------------IDL-------------   [1106]
'gi|575251|emb|CAA86571.1| helicase-like transcription factor [Homo sapiens]'                                    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFLRFEFQDVIPPDDFLTSDEEVDS-----------------------------------------------------------VLFGSLRG--HVVGLRYYTGVVNNNEMVALQRDPNN-PYD--------------------------------------------------KNAIKVNNVN-GNQVGHL----KKELAGALAYIMDNKLAQIEGVVPFGANN---AFTMPLHMTFWGKEE-----------------------NRKAVSDQLKK-----------HGFKLGPAPK----------------TLGFNLE-----SGWGSGRAGPSYSMPVHAAVQMTT----------------------------------------------------------EQLKTEFDKLF------------------EDLKEDDK--------------------------------------------THEME-----------------------------PA-EAIETPLLPHQKQALAWMVSREN-------SKELPPFWEQ------------------------RNDLYYNTITNFSEKDRP---ENVHGGILADDMGLGKTLTAIAVILTNFH--DGRPLPIERVKKNLLKKEYNVNDGSMKLGGNNTSEKADGLSKDASRCSEQPSISDIKEKSKFRMSELSSSRPKRRKTA-VQYIESSDSEEIETSELPQKMKGKLKNVQSETKGRAKAGSSKVIEDVAFACALTSSVPTTKKKMLKKGAC--------AVEGSKKTDVEERPRTTLIICPLSVLSNWIDQFGQH-IKSDVHLNFYVYYGPDRIR---EPA-----------LLS-------KQDIVLTTYNILTHDYG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLES-ERRWVLTGTPIQNSLKDLWSLLSFLKLKPF-IDR-----------------------------------EWWHRTIQRPVTM------GD-EG---GLRRL--QSLIK-NITLR-RTKTSKIK--GK----PVLELPERKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTYLLTN-AVSSNGPSGN--------------------------------------DTPEELRKKLIRKMKLIL--------SSGSDEECAICLD-SL--TVPV--------ITHCAHVFCKPCICQVIQNEQPH------------------------------------------------------------------------------------------------------------------AKCPL--C-RNDIHEDNLLEC--------------------------------------------------------------------------PPEELARDSE---------------KKSDMEWTSSSKINALMHALTDL----------------------------------------------------RKKNPN-----IKSLVVSQFTTFLSLIEIPLK-------ASGFVFTRLDGSMAQKKRVESIQCFQNTEAG----------------------------------SPTIMLLSLRAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKI-------------QNK--KRELAA--------------------------------GAFG--TKKP-NADEMKQAKINEIRTL-------------------------------------------------------------------------------------------------------------------------------------------IDL-------------   [1009]
lcl|Ppa_CHR37_206_1_unnamed_protein_product                                    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MPTSLLGTSSQATSSQARRSLVDLGDSDDEGDTQVDENADK-----------------------------------------------------------FLLGVVEV--NVVGLQYYSGRVSDREMVRLIREPSN-PYD--------------------------------------------------GNAIQVVNIL-GDQIGHI----ERYKACHLAPLVDQALALIEGIVPHGSKN---KFKMPCLVHIFCNSV-----------------------AENIVKQRLRV-----------AGVILQPPKT----------------ELEGSELQEYASNVKKPR----------------------------------------------------------------------------KEQKKCLDDIF------------------DELVEGAG-------------------------------------------DRCIMD-----------------------------PS-PAITSTMFSHQKEALAWMVRTEN-------SASLPPFWVTQKVRG------------------SKDLMYKNIITNYLTDKRP---IPLRGGLLADDMGLGKTLSLLALVATNRP--GATLSPIVKVNPTVSDAS------------------------ESRPKKKRKVAAADEVGF-------------------------------------------------------------------------------------------------ELGVTDYPPPVSGPRTTLIVCPLSVLSNWVTQLEEH-TMLG-SLSVCLYHGADRIR---DPV-----------VLG-------QFDIVLTTYNILATEG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CSEFSPLQKVNWLRIILDESHLIKSPSAQQTKAVVALKA-ERRWAVTGTPIQNTARDLFSLMQFLQLEPL-NDS-----------------------------------SYWRRTLERPLTN------GD-PS---GLTRL--QALIK-AIALR-RTKNMQVD--GR----RLVELPSKTISLHSVELTPEDRELYDKVEENGKEVIERFMESGTVLQNYATVLQIILRLRQICNHSALCPA-YTEMFAAELNQKDLLVYCVIRCEC-------------SKGSNGDPKNVPPPE-----LLDKLLNII--------KGGADFDCAICLN-QP--TNAV--------ITPCAHVYCQRCIEKSLLRNK--------------------------------------------------------------------------------------------------------------------EQCPM--C-RSNLSASDLMAA--------------------------------------------------------------------------PKEEGAERGQ---------------AVEQNSTKSSAKVDALINLLVAA----------------------------------------------------REKDPT-----EKSVVFSQFSQMLNCLEGPLA-------DVGFRFVRLDGSMTSKKRQAALTAFRSKDPD----------------------------------SPTIFLLSLKAAGVGLNLVAASRVYMVDPWWNPAVEEQAMDRVHRLGQTRDVTVVRLIVTDTIEDRILEL-------------QER--KRELAT--------------------------------SAFE--KR---SAEQRRLLRIQDVQLL-------------------------------------------------------------------------------------------------------------------------------------------MRL-------------   [889]
'gi|62643240|ref|XP 215728.3| PREDICTED: similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin,'     -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSWKFKRDSVWKYSQSAQYGAHENIPRLSYPPFFPRFEFQDIIPPDDFQTSDEELDL-----------------------------------------------------------VLFGTMRG--QVVGIRYYTGVVNNNEMVALEREPNN-PYD--------------------------------------------------KNAIKVNNVN-GNQVGHL----KRDLAAALAYIMDNKLAQVEGVVPFGASN---TFTMPLHMTFWGKEE-----------------------NREVVLDHLKK-----------HGFKLGPTPK----------------TVGSSLE-----NTWGSGRAGPSYSRPVHVAVQMTT----------------------------------------------------------EQLKTEFDKLF------------------EDLKEDDR--------------------------------------------TIEME-----------------------------PA-EAVETPLLPHQKQALAWMIAREN-------SKELPPFWEL------------------------RNDLYYNTITNFSVKERP---ENVHGGILADDMGLGKTLTAIAVILTNFD--DGRPLLGKRGKESHPGKEY--KDETVKLRGSNTNKTTDGHS-EPSACSEEPSISDVSEKSN--VSDLFSFFSKRRKIS-VQSTESSESEEIETSKLSQKMKGKLKNTQLDTKSKV------------------------------KGTS--------VMESSKKCDTGERTRTTLIICPLSVLSNWIDQIGQH-IKSEVDLNLYVYYGPDRIR---DST-----------WLS-------KQDIILTTYNILTHDYG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKDNSPLHSIKWLRVILDEGHAIRNPNAQQTKAVLELEA-ERRWVLTGTPIQNSLKDLWSLLSFLKLKPF-TDR-----------------------------------EWWHRIIQRPVTT------GD-EG---GLRRL--QSLIK-SITLR-RTKTSKIK--GK----PVLELPERKVFIQHITLSVEERKIYQSVKNEGKATIARYFTEGTVLAHYADVLGLLLRLRQICCHVHLPTN-GTSSSDPSRS--------------------------------------DTPEELRKMLVTKMKLIL--------SSGSDEECSICLD-SL--TFPV--------ITHCAHVFCKPCICQVIQREQPH------------------------------------------------------------------------------------------------------------------AKCPL--C-RSNIHGHNLLEC--------------------------------------------------------------------------PPEELACDSD---------------NKSDMEWTSSSKINALMNALIEL----------------------------------------------------RTKDPN-----IKSLVVSQFTTFLSLIETPLK-------ASGFVFTRLDGSMAQKKRVESIQCFQNTDAG----------------------------------SPTIMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKI-------------QNM--KRELAA--------------------------------GAFG--TKKT-DADEMKQAKINEIRTL-------------------------------------------------------------------------------------------------------------------------------------------IDL-------------   [974]
'gi|1655930|gb|AAC18656.1| RUSH-1alpha [Oryctolagus cuniculus] >gi|60390953|sp|Q95216|SMRA3 RABIT SWI/SNF-related matrix-associa'    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSWMFKRDPVWKYLQTVQYGVHGNFSRLSYPTFFPRFEFQDIIPPDDFLTSDEELDS-----------------------------------------------------------VLFGTLRG--HVVGLRYYTGVVNNNEMVALQREPNN-PYD--------------------------------------------------KNAIKVNNVN-GNQVGYL----KKELAAALAYIMDNKLAQIEGVVPYGANN---AFTMPLQMTFWGKEE-----------------------NRKAVLDQLKK-----------HGFKLGPAPK----------------TLGFSLE-----SGWGSGRAGPSYSMPVHAAIQMTT----------------------------------------------------------EQLKTEFDKLF------------------EDLKEDDK--------------------------------------------TQEME-----------------------------PA-EAVETPLLPHQKQALAWMVSREN-------SRELPPFWEL------------------------RNDLYYNTITNFSEKDQP---ENVHGGILADDMGLGKTLTAIAVILTNFH--DGKPLPVERMKKNQVKKECN-SSESDKPGRKDTIKKTDGLSKEGSRYSEEPSISDVK-KNKYSMSELSSSQPKRKKIA-VQYIESSDSEEIEISELPQKMKGKLKNVQSETK-RVKVGPSKIKEDTAFACALTSSASTTTKKILKKGAS--------AQRVQRKLMFEERPRTTLIICPLSVLSNWIDQFGQH-IKSDVHLNFYVYYGPDRIR---DPA-----------LLS-------KQDIVLTTYNILTHDYG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEA-ERRWVLTGTPIQNSLKDLWSLLSFLKLKPF-VDR-----------------------------------EWWHRTIQRPVTM------GD-EG---GLRRL--QSLIK-NITLR-RTKTSKIK--GK----PVLELPERPVFIQHITLSDEERKIYQSVKSEGKATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTHLLTN-TVSSSGPSGN--------------------------------------DTPEELRKKLIKKMKLIL--------SSGSDEECAICLD-SL--TVPV--------ITHCAHVFCKPCICQCIQNEQPH------------------------------------------------------------------------------------------------------------------AKCPL--C-RNDIHGDNLLEC--------------------------------------------------------------------------PPEELACDSE---------------KKSNMEWTSSSKINALMHALIDL----------------------------------------------------RTKNPN-----IKSLVVSQFTTFLSLIETPLK-------ASGFVFTRLDGSMAQKKRVESIQCFQNTEAG----------------------------------SPTIMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQRFDRCHRLGQKQEVIITKFIVKDSVEENMLKI-------------QNT--KRELAA--------------------------------GAFG--TKK--NANEMKQAKINEIRTL-------------------------------------------------------------------------------------------------------------------------------------------IDL-------------   [1005]
lcl|Smo_CHR37_35_1_unnamed_protein_product                                    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAWQQQQPPRPMQ?PPGSGDSAFYNSDLIRTGLGAYGEKLFGSSKDYVQSNISRFLAGQDIHYYFQLNEQYVKNKLKIILFPFLHKGHWTRIAEQVAGGITYKPPRYDINAPDLYIPLMALATYVVLRCYALGFTGKFSPAVMQSSFSHGIGAWLVEVILVKGMLFAVGSGEVPWLDTLAYSGYSLVGMSVSIAATISSKYLFYFALLWTGICMGVFLVKTLKRVFPG?VRSYERDSSKHHYLLLFVAIAPVPIFLWAMASAMAVDFSAAADEEDAINEP-----------------------------------------------------------ILVGSLMA--EVRGLAHHRGKLSSDGLAQLVRDPTN-RFD--------------------------------------------------TNAFRVINER-GEQVGYI----QKEKAKSLAPLVDKGLAQLQ-CIGAGNGS---SNRVSCEVFVFSLPA-----------------------MVDAVRDHLEYYGEQLRSPYDPPVDNVDDGRGGGGSDQRVANGSSSRSGGGSDQRVANGSSSRGGGGSDQRVANGASSSRASTSSSSR---RRDYRDHHQQHQRPPRDQHHRVDRSLSVPAPPPARRKLMMAPPPPPPPPPQAPKAPSIDDIF------------------ESMTAGAK-------------------------------------------IRQRME-----------------------------ADNSVIKSSLMQHQKEALAWMVQREN-------SSALPPFWEK-----------------------KGTTMYTNTLTNVTSAKRP---ESLRGGILADDMGLGKTLTVLALIATNKP--GAVLPPIEDIKEPEQSQG------------------------GEPASKKLKTSD-DKGKAKTAAPVPV-----------------------------------------------------------------------------------------SNDGPPCVPAADGPRGTLVICPLSVLSNWESQLKDH-TYPA-GLKVHKYHGPNRTA---NAR-----------TLA-------DYDIVFTTYNML-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TERNSPLKKVHWLRLVLDEAHIIKNPRAQQTKSAVALNA-DRRWAVTGTPIQNSAKDLLSLMQFLHFEPL-NEQ-----------------------------------SFWTKTIQKPLTS------GE-PV---GFARL--QGLMS-SISLR-RTKETKVN--GK----KLVDLPPKIITVFPVDLSPEDRSLYDKMEKDGRNMIRRFLDNGTVTKNYAVVLQMILRLRQICDHTSMCPA-EIVNMSTSSDTDT----------------------------QGAGPKAASPE-----LLKKMLATL----------GDDFDCPICLA-PP--SGAV--------ITSCAHVFCRRCLEKVLEDED--------------------------------------------------------------------------------------------------------------------KQCPM--C-HEELSEDDIFSS--------------------------------------------------------------------------GKPDEEEDEE---LSNKNDVEDDDDKIDVKGVKPSAKINALISMLEKT----------------------------------------------------RAKDPN-----IKSVVFSQFSTMLKLIEGPLQ-------KAGFKFVKLEGGMSASKREENMEAFKSTRSG----------------------------------SPTVFLLSLKAAGVGLNLVTASNVFMMDPWWNPAVEEQAMDRVHRLGQTRDVHVFRLIATDSIEERLLQV-------------QEK--KRAYAQ--------------------------------IALG--KE---ASEQRKKKCVEEVKLL-------------------------------------------------------------------------------------------------------------------------------------------MKC-------------   [1221]
'gi|67989453|ref|NP 001018178.1| zinc finger protein; zf-C3HC4 type (RING finger); ubiquitin ligase (E3) [Schizosaccharomyces po'    --------------------------------------------------------M-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRKVQKIIDEAPLEENSPPRFFDSDVEADSKPNDLTAANSIVDLKTNSQHENANAAGKEYGDSGVSESWVLDFLSVTGEKTISE----------------------FLAQK------------IWKTSNGDLNVAVDMYFDESFNIKNSNPDSESQKDTDASLTQMDQLSNTVSVKDLSINRNTNKKALNAVSPSLNLSSNSSVQDVSIDKEEMMKKQSRNALTPLDFIM---KKNELM----------------------KYIGCFGV--EAYSTASGTRTLQAGERIYLERQKLS--------------------------------IKSQSRNSRKKSKLLSINSSCYSNIVRFCNSD-HHEIGKL----PTEVASVISTLMEQGFWSFEAICIYSDNIIRFGSNVTLQVYCFINVN-----HPSLNRSPFTLATNSMQEEEEHLKASFAQNKRDHLL-RLFTWIALEPDLE----------------DCNTKESI----HIDDILKTSSLPEARDESNSDLTPSSTE--------------------------DEE-------------------------DVVSDQLAILY------------------DKVKTSGA-------------------------------------------ELPSAP-----------------------------KP-STFALDLREYQKQALYWMCCKEEGVQSDGSAPKLHPLWSRFRFPK----DSEFPEFFKCSSDDDNTHFYVNLYTGETTMLFPNSMPYHRGGILADEMGLGKTIEVLSLIHSRPCFSTDEIPEAFR--------------------------------------------------------------------------------------------------------------------------------------------------------HSKPSLPVASRTTLVVAPMSLLDQWHSEACKV-SQGT-KFRSMIYYGSEKPL---DLK-----------SCV--IDTSTAPLIIITSYGVLLSEFSQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QSHSSGLFSVHWFRVVLDEGHNIRNRESKTAKACHSISS-QNRWVITGTPIVNKLDDLYSLIKFMRYEPW-CNY-----------------------------------TYWQTFVSLPYQS------KDVLK---ALNVV--QSILE-FLVLR-RTKETKDRN-GN----SIVTLPPKTVKIEYLDFSDSERKIYDSLYTKAKSTVNANIVAGTLFRNYTTILGLLLRLRQACCDPVLLSN-MTINSETFDDFEFSVE--------QFNSLINQFVVTGKPIPSDI-------------LKIDTLKSF---------EALITECPICCNEPI--QNPL--------LLNCKHACCGDCLSEHIQYQKRRNIIP--------------------------------------------------------------------------------------------------------------PLCHT--C-RQPFNEQDVYKPFFVKNNGTQSTL---------------------------------------------------------------------------------LVGEEVKWKYWNRLQSVKLNGLLGQLRQL----------------------------------------------------THSSEP-----EKVVIFSQFTTFLDIIADVLE-------SEKMGYARFDGTMSQQMRSTALETFRNDPDV------------------------------------NVLIISLKAGGVGLNLTCANHVFIMDPWWSWSVEAQAIDRIHRLGQEKPVFVTRYIVRDTVEERMLKI-------------QER--KNFIT---------------------------------GTLGM------SEGKQQVQSIEDIKML-------------------------------------------------------------------------------------------------------------------------------------------FEY-------------   [1133]
lcl|Smo_CHR37_202_1_unnamed_protein_product                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAVDFSAAADEEDAINEP-----------------------------------------------------------ILVGSLMA--EVRGLAHHRGKLSGDGLAQLVRDPTN-RFD--------------------------------------------------TNAFRVINER-GEQVGYI----QKEKAKSLAPLVDKGLAQLQ-CIGAGSGS---SNRVSCEVFVFSLPA-----------------------MVDAVRDHLEYYGEQLRSPYDPPVDNVDDGRG----------------GGGSDQRVANGSSSRGGGGSDQRVANGASSSRASTSSSSRASTRRDYRDHHQQHQRPPRDQHHRVDRSLSVAAPPPARRKLMMTPPPPPPPPPQAPKAPSIDDIF------------------ESMTAGAK-------------------------------------------IRQRME-----------------------------ADNSVIKSSLMQHQKEALAWMVQREN-------SSALPPFWEK-----------------------KGTTMYTNTLTNVTSAKRP---ESLRGGILADDMGLGKTLTVLALIATNKP--GAVLPPIEDIKEPEQSQG------------------------GEPASKKLKTSD-DKGKAKTAAPVPV-----------------------------------------------------------------------------------------SNDGPPCVPAADGPRGTLVICPLSVLSNWESQLKDH-TYPA-GLKVHKYHGPNRTA---NAR-----------ILA-------DYDIVFTTYNML-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TERNSPLKKVHWLRLVLDEAHIIKNPRAQQTKSAVALNA-DRRWAVTGTPIQNSAKDLLSLMQFLHFEPL-NEQ-----------------------------------SFWTKTIQKPLTS------GE-PV---GFARL--QGLMS-SISLR-RTKETKVN--GK----KLVDLPPKIITVFPVDLSPEDRSLYDKMEKDGRNMIRRFLDNGTVTKNYAVVLQMILRLRQICDHTSMCPA-EIVNMSTSSDTDT----------------------------QGAGPKAASPE-----LLKKMLATL----------GDDFDCPICLA-PP--SGAV--------ITSCAHVFCRRCLEKALEDED--------------------------------------------------------------------------------------------------------------------KQCPM--C-HEELSEDDIFSS--------------------------------------------------------------------------GKPDEEEDEE---LSNKNDVEDDDDKIDVKGVKPSAKINALVSMLEKT----------------------------------------------------RAKDPN-----IKSVVFSQFSTMLKLIEGPLQ-------KAGFKFVKLEGGMSASKREENMEAFKSTRSG----------------------------------SPTVFLLSLKAAGVGLNLVTASNVFMMDPWWNPAVEEQAMDRVHRLGQTRDVHVFRLIATDSIEERLLQV-------------QEK--KRAYAQ--------------------------------IALG--KE---ASEQRKKKCVEEVKLL-------------------------------------------------------------------------------------------------------------------------------------------MKC-------------   [946]
'gi|88181413|gb|EAQ88881.1| hypothetical protein CHGG 05500 [Chaetomium globosum CBS 148.51]'                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MP--TSRYIGAFGV--EGWTTRSGTNLLKHGDIVKIERQRIQIPKA---------------------TSYKGH---PKPGPVQPTYRVSAAAAKRVDVIVRFTDSV-GREIGRL----AKDTANWVSTLMDQEICSFEGTCVYAPERLRTNDTVFLQLRCSLLKS--AFC-REF--HVADNRTTGQFEETESSEEKDLRLRQVALV-RLFQEINLLPTRG----------------NAAAAQN-----QRQGLLDAAEMAESKEKD-KPRTQGQGG--------------------------T----AASSPSDDNEDGE----------ELEQDQLDALY------------------KKAQSFDF-------------------------------------------STPEAE-----------------------------PA-DTFRLTLRPYQKQSLHWMMAKERNVQREERETSMHPLWEEYGWPTKDHDDKELPNV------ADHPTFYVNPYSGELSLQFPRQGQHCLGGILADEMGLGKTIQMLSLIHTHKSDTAIAARQGNRTASSVNQLPR------------------------------------------------------------------------------------------------------------------------------------------LPSLQTCETVSDAPCTTLVVAPMSLLAQWQSEAENA-SMEG-TLRSLLYYGNEKNV---DLL-----------ELCCEANASNAPDVIITSYGVVLSEFTQMA-TRPSG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KAGSRGLFSLNFFRVILDEGHSIKNRQSKTARACYDIAA-THRWVLTGTPIVNKLEDLFSLVKFLKVEPW-NNF-----------------------------------SFWRTFITVPFES------KNYMR---ALDVV--QTVLE-PLVMR-RTKNMKTPD-GK----ALVALPPKQIEIIDIELSKAERDVYDYIFTKAKRTFLANVEAGTVMKAFTSIFAQVLRLRQSCCHPILVRN-REIAAEEEEAGAAADAAAGLADDMDLHSLIERFTATTDDTTD------T-NA-----FGAHVLGQI--------RDEAINECPICAEEPM--VDQT--------VTGCWHSACKNCLLDYIKHQSDHHEV---------------------------------------------------------------------------------------------------------------PRCFH--C-REVINSRDLFEVVRYDDDP--DVS--------------------------------------------------GV-------DQGPRITLQRLG---------------------VGNSSAKIVALINQLREL----------------------------------------------------RRETPT-----IKSVVFSQFTSFLSLLEPALA-------RANMHFVRLDGSMTQKARAAVLEEFKESKKF------------------------------------TILLLSLKAGGVGLNLTSAKRVYMMDPWWSFAIEAQAIDRVHRMGQEDEVKVYRFIVKDSVEQRMLKV-------------QDR--KKFLAT---------------------------------SLGMM-----SDEDKRMQRIEDMREL-------------------------------------------------------------------------------------------------------------------------------------------LS--------------   [982]
'gi|5420446|emb|CAB46673.1| DEAD/DEAH box helicase; involved in nucleotide-excision repair; involved in DNA repair; SNF2 family;'    --------------------------------------------------------M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKASKNKESGVKKANNSFLQNFGVNTAGKENESTSLPRLPKSEDESIPKQ----------------------SIKSKNKKKT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QHFLSDAFESLKRQEIDTNEKEVIVSAPITSKPAQVFYSKKLERKDEGIRKWEKDPFAPISVKSGAWKKPYTKVPEVSINKATSKRTD-LINDKPIVIPIPR----------------ASTSTLYF---GKHNKPTSENRKGPIGIPTEEILTS----------------------------------------------------------QNTQAMLHKLFENNVL-------------DNVKDDSM--------------------------------------------QRQSS-----------------------------FI-PGMHIRLLDHQVQGLTWLKSRET-----------------------------------------------------------VSKSSASGGILADDMGLGKTIQMIALILSHPL----------------------------------------------------------------------------------------------------------------------------------------------------------------------PKKKHSIKSTLVVAPLSLIKQWESEVQTK----S-KLTAIVYHGASRYK---LLK-----------VIH-------EYDVVITTYQILVSEWVSHNTTGTDGKSPTEAKSY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKKKPSLFAFYWWRIILDEAHTIKNKSSKSALACCALQG-INRWCLTGTPLQNNVDELYSLVKFLHINPF-NDQ-----------------------------------SVWKDQISLPLCQ------GEENL---VFKRL--RMLLS-VIMLR-RTKTLLEANAGKDGTGGALKLSKRLVYKVICKFEESERDFYSNLARNMERTMSNFVNSGKLGKNYTNILCLLLRLRQACNHPQSLNF-QFEQDVDAFNA---------------------------------------------------------------LDGAANTNKLASD-QD--VDDLANLLETVEIGSRKKSFCTICMAELPPDFHE-------------------------------------------------------------------------------------------------------------------KKCKD--C----------------------------------------------------------------------------------------------------SRNFKELDKGIQDPNDKTLYKSSKIREILKILSLD----------------------------------------------------EQEEDDTVRGLRKTIIFSQFTTFLDIIDLHLR-------KAGIGFVRYDGRMNNRAREKSLDLLRSDSGT------------------------------------QVLLCSLKCGALGLNLTCASRVILCDVWWNPAIEEQAIDRVHRIGQRRDVLVYKLVVENTIEEKIVEL-------------QNL--KRDLAK--------------------------------QALG--DGKK-SVFTSKKLTLNDLLFL-------------------------------------------------------------------------------------------------------------------------------------------FNKRAAA---------   [830]
'gi|67515525|ref|XP 657648.1| hypothetical protein AN0044.2 [Aspergillus nidulans FGSC A4] >gi|40746207|gb|EAA65363.1| hypotheti'    --------------------------------------------------------M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NFDASNDRPLKKRRFF---VDDPLDTAVTPAEKSPA---LDASSSASTHTD------------------PNYSANG------------SPAQIQTQQEYNFSNGGHATQPATAA------------------------------------------------GTRTHQAQSPAHDTLS---------DFDTEAFVSIVGEQVSPETLSQIRKLSDGSLEKAINVYFDGSWKNAGSPGSSQTTLLS---CERNASRPSPLHTSREQ-----GTGPAENGADSVTE-PISRSKLQP--ARRYLGAFGV--EAWATRSGIGLIKHGDTVNIERARSQ-PLS---------------------TRGRTG---------------KLRVNQKGDVLTRFTNTA-GQEIGRL----PRETAEWVSTLLDQKICEFRGVCVFAPDRLRVNDTIYLQLRCFMRIE--AFQPKELPQKQDDNRATTIFEQEESAEEKQLRLRQVALV-QLFDEIGLKSTTQ----------------DDEIKKQ-----RKEGLLRAAEMADQEAKKLAKSG---------------------------------------NTDSGDEEPA----------ELEQDQLDALY------------------KKAQSFDF-------------------------------------------SMPEAQ-----------------------------PP-SSFAMDLRKYQKQALYWMLSKEKDKKSG-REVSIHPLWEEYDWPLKDVDDKDLPII------EGINHFYVNPYSGELSLDFPAQEQHCLGGILADEMGLGKTIEMLSLVHSHRN---LPPTQ------SLGNLTR------------------------------------------------------------------------------------------------------------------------------------------LP----VSGVVPAPYTTLVVAPMSLLAQWEGEALKA-SRNG-SMKVLMYYGNEKNV---NLR-----------EMCSAGNAA-APNMILTSYGVVMSEHRTHQALAPGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SWTPGNLFSVDFFRVILDEAHIIKNRRSKTARACYDLKA-THRWVLTGTPIVNRLEDLFSLVRFLRVEPW-NNF-----------------------------------SFWKTFITAPFES------KEVVR---AISVV--QTVLE-PLVLR-RTKSMKTPE-GE----PLVPLPKRTIRIEKVELIEQEREIYNHIYTRAKQTFNSNVAAGTLLKSYSTIFAQLLRLRQTCCHPILTRN-KAIVADEEDAAAAADQDSDLKDDMDLQELINRFTATTSDAESSNEPPDPSMK-----FTAHALRQI--------QTESAGECPICSEEPM--IDPA--------VTACWHSACKGCLKDYIQHQRDKGVQ---------------------------------------------------------------------------------------------------------------PRCFS--C-RADLNPQDIFEVVRYQSPNTTPTE---------------------------------------QTPSSIGGDNVYSS---SQPPPPPRISLRRINP-----------------LSPSAHTSAKIHALLAHLV-------------------------------------------------------RVPAG-----TKSVVFSQFTSFLDLIGPQLT-------KAGISFVRLDGTMAQKARAEVLAQFTKFETFTQEELDQAESTS---APSGLTPTPKTPKQSSSPSSPTVLLISLKAGGVGLNLTAASNVFMMDPWWSFAIEAQAIDRVHRMGQLRDVNVVRFIVKDSIEERMLRV-------------QER--KMGIAG---------------------------------SLGLMGEG--NEEERRKERIEELRLL-------------------------------------------------------------------------------------------------------------------------------------------FE--------------   [1202]
gi|85540717|sp|Q4WVM1|RAD5_ASPFU_DNA_repair_protein_rad5                                    --------------------------------------------------------M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VFGDLNERPLKKRRFF---VDEE-DTHPPSSEAAPVTTNLDTSTISSAGPEGSDVRQQ---QLNGAVPFPNVKESSRESPGLGPEDKQDNLLKEDEENNGTVDYEILNHSPSIHAQ-----------------------------QDQRVDQGLTNGFGGQPSGERTVSETQAFQSSG---------GFDTSTFASIIGEHLSPESLEKIRKASGDDLERAVNIYFDGSWKSSNNSLSQPLV---APHQQTLSNPCTPVNESISQTV---NTKISKKPNQAPSS----RCLSQSS---RYIGAFGV--GAWATRSGVGLLKHGEHVNVERARSQ-PVS---------------------KRGRGG---------------KLITNQKGDVLTRFTNKS-GQEIGRL----PRETAEWVSTLIDQKICRFEGICVFAPDRVRVNDTIYLQLWCYLRKE--AFLPRNLWNMGDDNRSTAFFEEQESAEEKQLRLRQVALV-KLFDEIGLQPTTV----------------NDMTKKH-----KKEGLLRAAEIAEQYDKT-KREGKS-------------------------------------NESSEDEESP----------ELEEDQLDTLY------------------KKAQSFDF-------------------------------------------NMPEAQ-----------------------------PP-PSFVLNLRKYQRQALHWMLAKEKDKKSG-RELSMHPLWEEYTWPTKDVDDKDLPAV------EGQAHFYVNPYSGELSLDFPAQEQHCLGGILADEMGLGKTIEMLSLIHSHRN---VSPSR--QGPSSSTELVR------------------------------------------------------------------------------------------------------------------------------------------MP--SSSSAILPAPNTTLVVAPTSLLSQWESEAMKA-SEQG-TMKVLMYYGVDKST---NLQ-----------ELCSAGNPA-APNIIITSYGVVLSESRQLA---MFN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNTQGGLFSVDFFRVILDEAHVIKNRRSKTARACYELRA-THRWVLTGTPIVNRLEDLFSLVRFLQVEPW-NNF-----------------------------------SFWKTFITVPFES------KDYVR---ALNVV--QTVLE-PLVLR-RTKTMKTPE-GE----PLVPLPRRTIDIVEVELSEQEREIYDYIFTRAKRTFNDNIEAGTLLKSFSTIFAQILRLRQTCCHPILTRN-KTIVADEEDAAATADAANELKDDMDLQELIDRFSASMENADT-AEAQDPSAK-----FTTHALRQI--------QTESSGECPICSEEPM--IDPA--------VTACWHSACKKCLEDYIRHQTDKGVP---------------------------------------------------------------------------------------------------------------PRCFS--C-RAPVTSRDIFQVIRHQSPSSTPTE---------------------------------------T--------DLYSSTPASSPHPAPRISLRRIHP-----------------LSPSAHTSAKIHALINHLN-------------------------------------------------------RVPAN-----TKSVVFSQFTSFLDLIGAQLT-------KAGISYVRLDGTMPQKARAEVLAEFNRTETFHQEEIDEDEGPD---TPRVRISSKNS---RSSPKSPAVLLISLRAGGVGLNLTAASNVFMMDPWWSFAIEAQAIDRVHRMGQLRDVSVTRFIVKDSIEGRMLRV-------------QER--KMNIAG---------------------------------SLGLRVGGDGSEDEKRKERIEELKLL-------------------------------------------------------------------------------------------------------------------------------------------FE--------------   [1245]
'gi|70997286|ref|XP 753393.1| DNA excision repair protein Rad5 [Aspergillus fumigatus Af293] >gi|66851029|gb|EAL91355.1| DNA exc'    MTSARPKCGGSSRRSPSRRVSRPSMIRRIEFDAFCARSLTFPCHKFGHLISGKTFKM------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VFGDLNERPLKKRRFF---VDEE-DTHPPSSEAAPVTTNLDTSTISSAGPEGSDVRQQ---QLNGAVPFPNVKESSRESPGLGPEDKQDNLLKEDEENNGTVDYEILNHSPSIHAQ-----------------------------QDQRVDQGLTNGFGGQPSGERTVSETQAFQSSG---------GFDTSTFASIIGEHLSPESLEKIRKASGDDLERAVNIYFDGSWKSSNNSLSQPLV---APHQQTLSNPCTPVNESISQTV---NTKISKKPNQAPSS----RCLSQSS---RYIGAFGV--GAWATRSGVGLLKHGEHVNVERARSQ-PVS---------------------KRGRGG---------------KLITNQKGDVLTRFTNKS-GQEIGRL----PRETAEWVSTLIDQKICRFEGICVFAPDRVRVNDTIYLQLWCYLRKE--AFLPRNLWNMGDDNRSTAFFEEQESAEEKQLRLRQVALV-KLFDEIGLQPTTV----------------NDMTKKH-----KKEGLLRAAEIAEQYDKT-KREGKS-------------------------------------NESSEDEESP----------ELEEDQLDTLY------------------KKAQSFDF-------------------------------------------NMPEAQ-----------------------------PP-PSFVLNLRKYQRQALHWMLAKEKDKKSG-RELSMHPLWEEYTWPTKDVDDKDLPAV------EGQAHFYVNPYSGELSLDFPAQEQHCLGGILADEMGLGKTIEMLSLIHSHRN---VSPSR--QGPSSSTELVR------------------------------------------------------------------------------------------------------------------------------------------MP--SSSSAILPAPNTTLVVAPTSLLSQWESEAMKA-SEQG-TMKVLMYYGVDKST---NLQ-----------ELCSAGNPA-APNIIITSYGVVLSESRQLA---MFN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNTQGGLFSVDFFRVILDEAHVIKNRRSKTARACYELRA-THRWVLTGTPIVNRLEDLFSLVRFLQVEPW-NNF-----------------------------------SFWKTFITVPFES------KDYVR---ALNVV--QTVLE-PLVLR-RTKTMKTPE-GE----PLVPLPRRTIDIVEVELSEQEREIYDYIFTRAKRTFNDNIEAGTLLKSFSTIFAQILRLRQTCCHPILTRN-KTIVADEEDAAATADAANELKDDMDLQELIDRFSASMENADT-AEAQDPSAK-----FTTHALRQI--------QTESSGECPICSEEPM--IDPA--------VTACWHSACKKCLEDYIRHQTDKGVP---------------------------------------------------------------------------------------------------------------PRCFS--C-RAPVTSRDIFQVIRHQSPSSTPTE---------------------------------------T--------DLYSSTPASSPHPAPRISLRRIHP-----------------LSPSAHTSAKIHALINHLN-------------------------------------------------------RVPAN-----TKSVVFSQFTSFLDLIGAQLT-------KAGISYVRLDGTMPQKARAEVLAEFNRTETFHQEEIDEDEGPD---TPRVRISSKNS---RSSPKSPAVLLISLRAGGVGLNLTAASNVFMMDPWWSFAIEAQAIDRVHRMGQLRDVSVTRFIVKDSIEGRMLRV-------------QER--KMNIAG---------------------------------SLGLRVGGDGSEDEKRKERIEELKLL-------------------------------------------------------------------------------------------------------------------------------------------FE--------------   [1301]
lcl|Smo_CHR37_345_1_unnamed_protein_product                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSASQEVVEVEDDSG--EEEEEAEA-----------------------------------------------------------ILVGCLTV--NVVGLRYYHGTVTNGEMVQLVREPTN-PYD--------------------------------------------------SNAIRVLNIR-GDQVGHV----EKNKAMHLAPLVDQNLAFLEGIVPSGSKN---AYRMPCQVHVFSKPA-----------------------LAAAVVDHLDYFGERL------SGGLLEEGAH----------------EGGGGGRASSKTSKRKVLAGAASS----------------------------------------------------------------------APKKPSIDDIF------------------EDLALDCK-------------------------------------------KRQAME-----------------------------PDSSIVKSELMQHQKEALAWMIQREN-------SSALPPFWEIQPPKG-----------------SNATTMYMNTLTNFTCDKRP---EPLRGGILADDMGLGKTLAVLALVATNRP--GAVLPPVVDIAEELEELE------------------------EQPAAKKSKTTERSKGRDKKASDSGSD----------------------------------------------------------------------------------------DHPPPPCVPKAGGPLATLVVCPLSVLSNWIGQLEDH-TRAG-SLNVCVFHGPDRIK---NAK-----------KLA-------SHDLVFTTYNMLASEW-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NDRNSALRKVQWLRLVLDEAHLVKNPKAQQTKCAISLNA-DRRWAVTGTPIQNNAKDLFSLMQFLHFEPL-SER-----------------------------------TFWNRTIQRPLTS------GQ-PA---GFARL--QGLMS-AISLR-RTKEARVN--GK----KLVDLPPKIVTVFPVDLTPNDRAIYDKMERDGKDIILKYIANGTMTKNYAIVLQIILRLRQLCDHSSMCPG-SMDVLAALGAENQ--------------------------------GQIASPE-----LLQKMLAMI----------GDDFDCPICLS-PP--VTAI--------ITRCAHVFCRRCIEKTLERDK--------------------------------------------------------------------------------------------------------------------RQCPM--C-RGDLTISDIYTS--------------------------------------------------------------------------NVGEEQEEAG--------------NDGDGGGGGSSAKITALLSILDKT----------------------------------------------------RAKDPS-----IKTVVFSQFSSMLKLAEAPLT-------QAGYKFVKLQGGMSAKKRDEAMEAFKSTSKD----------------------------------SPTVFLLSLKAAGVGLNLVSASNVVMLDPWWNPAAEEQAMDRVHRLGQTRDVHVFRLVATDSIEERLLQM-------------QEK--KRAYAQ--------------------------------IALG--KE---ASEERRKQCIQEVRLL-------------------------------------------------------------------------------------------------------------------------------------------MQC-------------   [873]
lcl|Smo_CHR37_87_1_unnamed_protein_product                                    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEEVLPMDRRFGKPASSGSEPGWRGPGVKKEEPPGS---------------------------------------------------------YAQTTAWNGATSSYGWGVAPKMEEVLLMGRRFDQPASSGSSVHAGPKKKEEPVQNTSTNTTPNQPAQPVPVVRRNGQASIATSSCRWTAPPNKEEVLPTGRRFDRPSLSGSYV----------------HAGPKKEP---LSQATPKKEEPVHNTSTNTTPNQAAQP--------------------------------------------------------VHVDKCLRRIL------------------ERMIT--------------------------------------------PDTNEEAT-----------------------------LDEGMMTINLLKHQRIALAWMVKSEE-------------------------------------------------------------RGNCSGGFLADDQGLGKTVSTIALILKARSPIHLLNPETQAIKPEIKPEI--------------------------------------------------------------------------------------------------------------------------------------------KPELMQKPEPKRRGGTLVVCPTSVLRQWYHEIEEKVTAAA-RLSTHIYHGGNRKR---CPY-----------ELA-------KYDVVLTTYSIVTNEVPKPDEEIEAD---EETYADYG-SSCSQAFSNKKTKKRTP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TRGAGPLAEVKWFRVVLDEAQTIKNAKTLAAYACWGLKA-ERRWCLSGTPLQNTIDDLFSYFRFLRFDPL-DSY-----------------------------------STFKIKVKEPISR-------DPST---GYAKL--QMILQ-CRGQSFDVTETVID--GK----PILQLPEKHVTMLQADFSKEEREFYDSLEQRSRDKFQSYQRRGTVQKNYANIMVLLLRLRQACCHRSLVPEDKESKIEDEESNIDA-------------------------------------------------------------KENVSICTICED-AP--EQPF--------LSCCGHVFCSQCISEKLLTSEELA-----------------------------------------------------------------------------------------------------------------VKCPAPGC-SCTLESSLLSSFMSLD-------------------------------------------------------------------------------------------------SNGGYESSSKINAVMERLMNLPVT--------------------------------------------SPAAAGKKAVT-----EKALVFSQWTSLLDLVEPRLE-------KAGLEFRRLDGTMSVMERDAAVCEFNEKPEV------------------------------------SVMLMGLKVGSLGLNMVAACHVLLLDVWWNPTVEDQAIDRAHRIGQTRDVHVTRFTVKKTIEDRILAL-------------QGSCLPDVPVD--------------------------------QAVQ--EDS--GFFSSTHVQLEPWPHFGEDLGAFINGLDNTEKRLSTFFRERNHLLVASEESIMHALNFIVLPVVEEMAEQLCIPFWYRHADGRAYWFPTQVVVDTSTASSPFSCKGASRNEPSGVHGVGQVVGPWNVELTKVGTNDRRVEYHVERLFGSMVLD------------------   [988]
'gi|22326612|ref|NP 196132.2| ATP binding / ATP-dependent helicase/ DNA binding / helicase/ nucleic acid binding / protein bindi'    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAQFLRRFSSSPMANEDEFQSPVEPSQQQSQDCVSES-----------------------------------------------------------YLIGFVIA--NIVGLKYYSGRINGREMVGLVREPLN-VYD--------------------------------------------------NNAIRVLNTR-SEQVGHI----ERTVAAVLAPMIDSHTIVVEGIVPNTRSN-SNRYRIPCQIHVFAKLE-----------------------ASSTVKSTISR-----------GGLVLISESD----------------TSFGLSEA---VVVKEQMG---------------------------------------------------------------------------NGDKRSVDKIF------------------KLVDENVK----------------------------------------LMGKLVAAE-----------------------------PPREVIKSELFAHQKEGLGWLLHREK-------SGELPPFWEE------------------------KDGEFLNTLTNYRSDKRP---DPLRGGVFADDMGLGKTLTLLSLIAFDRYGNASTSTPTEEPLDGEGDKI------------------------EKKGKKRGRGKSSESVTRK------------------------------------------------------------------------------------------------KLKTDDVVGMNVSQKTTLIVCPPSVISAWITQLEEH-TVPG-ILKVYMYHGGERTD---DVN-----------ELM-------KYDIVLTTYGTLAVEE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKA-SRRWAVTGTPIQNGSFDLYSLMAFLRFEPF-SIK-----------------------------------SYWQSLIQRPLGQ------GN-KK---GLSRL--QVLMA-TISLR-RTKEK-----------SLIGLPPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLRQLCDDMSLCPP-ELRSFTTSTSVE---------------------------------DVTDKPE-----LLQKLVAAL--------QDGEDFDCPICIS-PP--TNII--------ITRCAHIFCRACILQTLQRSK--------------------------------------------------------------------------------------------------------------------PLCPL--C-RGSLTQSDLYNA--------------------------------------------------------------------------PPPPPDSSNT--------------DGEDAKSSTKSSKVSALLSLLMAS----------------------------------------------------RQENPN-----TKSVVFSQFRKMLLLLETPLK-------AAGFTILRLDGAMTVKKRTQVIGEFGNPELT----------------------------------GPVVLLASLKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLEL-------------QQK--KKNLAN--------------------------------EAFK--RR---QKKDEREVNVEDVVAL-------------------------------------------------------------------------------------------------------------------------------------------MSL-------------   [862]
'gi|10178052|dbj|BAB11535.1| helicase-like transcription factor-like protein [Arabidopsis thaliana] >gi|60390959|sp|Q9FF61|SM3L1'    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRVLKYFRAPSSLRHRSSPMAQFLRRFSSSPMANEDEFQSPVEPSQQQSQDCVSES-----------------------------------------------------------YLIGFVIA--NIVGLKYYSGRINGREMVGLVREPLN-VYD--------------------------------------------------NNAIRVLNTR-SEQVGHI----ERTVAAVLAPMIDSHTIVVEGIVPNTRSN-SNRYRIPCQIHVFAKLE-----------------------ASSTVKSTISR-----------GGLVLISESD----------------TSFGLSEA---VVVKEQMG---------------------------------------------------------------------------NGDKRSVDKIF------------------KLVDENVK----------------------------------------LMGKLVAAE-----------------------------PPREVIKSELFAHQKEGLGWLLHREK-------SGELPPFWEE------------------------KDGEFLNTLTNYRSDKRP---DPLRGGVFADDMGLGKTLTLLSLIAFDRYGNASTSTPTEEPLDGEGDKI------------------------EKKGKKRGRGKSSESVTRK------------------------------------------------------------------------------------------------KLKTDDVVGMNVSQKTTLIVCPPSVISAWITQLEEH-TVPG-ILKVYMYHGGERTD---DVN-----------ELM-------KYDIVLTTYGTLAVEE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKA-SRRWAVTGTPIQNGSFDLYSLMAFLRFEPF-SIK-----------------------------------SYWQSLIQRPLGQ------GN-KK---GLSRL--QVLMA-TISLR-RTKEK-----------SLIGLPPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLRQLCDDMSLCPP-ELRSFTTSTSVE---------------------------------DVTDKPE-----LLQKLVAAL--------QDGEDFDCPICIS-PP--TNII--------ITRCAHIFCRACILQTLQRSK--------------------------------------------------------------------------------------------------------------------PLCPL--C-RGSLTQSDLYNA--------------------------------------------------------------------------PPPPPDSSNT--------------DGEDAKSSTKSSKVSALLSLLMAS----------------------------------------------------RQENPN-----TKSVVFSQFRKMLLLLETPLK-------AAGFTILRLDGAMTVKKRTQVIGEFGNPELT----------------------------------GPVVLLASLKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLEL-------------QQK--KKNLAN--------------------------------EAFK--RR---QKKDEREVNVEDVVAL-------------------------------------------------------------------------------------------------------------------------------------------MSL-------------   [881]
'gi|57222830|gb|AAW40874.1| DNA repair protein RAD5, putative [Cryptococcus neoformans var. neoformans JEC21] >gi|58258561|ref|X'    --------------------------------------------------------M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAEASPETGRFRTKSSPELFFPATDSEGEEQNDVPLTIVHPTQSTSSKF----------------------SINIASSSRPQHGITTGDFEAT-------------------------------------------SQTSAHDNVDDDFSIVGHNPASSHPQGTIVAPRRKRSLQQAHSHHSSSSSSPVPSAPVI---RADFRK----------------------GFLGEFVC--EGWSLSKGRGYCSPGTKIVIERPKSK-STDVGAPKPGRKDSGPVRLVNGKVVGGVKSKQMTLGSMMAKKVEPAKKVKATTDQIIRFRNER-GFEIGRL----SIHEAGFLAHLLDTGVIQLSGNVIDCPQNLTTGCTILLNIKVYLARK----AFENFGKHKREEHFSFWKDQRETAMEEAMRLRKDSLR-SLFERIGVKPIQS----------------SALSKVT-----PIQGVLNRQKGPDLEGSRLRSSPSTSTA--------------------------EEKGKGRAAMPAVDDDGEDSGDEAEKLDEKQMNEIDSIY------------------RKAQQGDT-------------------------------------------RLDEMD-----------------------------PP-STFLYTLRPYQKQALTWMNAREKGDSSV-RNESLHPLWEEYLFKKDQLPGEPIEISDDDEQPDSTRKFYWNPYSGELSLKFPTSQNLSRGGILADAMGMGKTCMMASLIHTNREEKPAGNLESQTRDGVEGEID------------------------EEPASKRIKFKQVTLSNQ-------------------------------------------------------------------------------------------------WRAVPTAPKVESFPRATLVVCPVSLAAQWHDELRKM-SQQG-SINSYVWYGGDRVD---IEA-----------LLA--GDGKERVDVIVTSYGTLTSEYQKWLRTKDRP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NYEGGSLYDHEFLRIVLDEAHNIRNRLAMVSKACYELKG-QRRWALTGTPIVNRLEDLYSLLHFLRITPW-GNY-----------------------------------SFFRSFVTVPFLN------QD-HK---ALNVV--QYILE-SCLLR-REKTMRDKD-GR----LIVDLPPKTVEIKVLQFSRAERQIYKFLEERAKKRFIDLDADGRAMSNYTSILAMLMKLRQCVDHPLLVLG-KSGEDGELGEK--ILESGAGNGEGNLRDMIAMYAGG---------IRAETPEDVDKAYAAKVLKEL-------GEQEDTPICELCSN-EM--FDEV--------LLPCYHRSCQDCIVEWIGTCEDQNKI---------------------------------------------------------------------------------------------------------------ASCPS--CGKGPIKLADLRSVQ-----------------------------------------------RRHKRVNPITDAYPGGRDPNLKSSNDTTVTLGKV----------------------DLVTSTKLRALLRQLEEI----------------------------------------------------RQEDPK-----AKALVFSQFTSFLDLIEATLT-------KQGIRWLRFDGTMSQAQRANTIEEFGRKTNE-----------------------------------PLILLISLKAGGVGLNLTMANYVFLMDTWWNEAIEQQAIDRVHRLGQNKPVYVTRYIIKGTVEKRIMKI-------------QRS--KTALVN--------------------------------ASLS-------NGAKTKETTLADIKKI-------------------------------------------------------------------------------------------------------------------------------------------FGMDEEDSEGEVY---   [1198]
'gi|50260975|gb|EAL23625.1| hypothetical protein CNBA2720 [Cryptococcus neoformans var. neoformans B-3501A]'                         --------------------------------------------------------M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAEASPETGRFRTKSSPELFFPATDSEGEEQNDVPLTIVHPTQSTSSKF----------------------SINIASSSRPQHGITTGDFETT-------------------------------------------SQTSAHDDVDDDFSIVGHNPASSHPQGTIVAPRRKRSLQQAHSHHSSSSSSPVPSAPVI---RADFRK----------------------GFLGEFVC--EGWSLSKGRGYCSPGTKIVIERPKSK-STDVGAPKPGRKDSGPVRLVNGKVVGGVKSKQMTLGSMMAKKVEPAKKVKATTDQIIRFRNER-GFEIGRL----SIHEAGFLTHLLDTGVIQLSGNVIDCPQNLTTGCTILLNIKVYLARK----AFENFGKHKREEHFSFWKDQRETAMEEAMRLRKDSLR-SLFERIGVKPIQS----------------SALSKVT-----PIQGVLNRQKGPDLEGSRLRSSPSTSTA--------------------------EEKGKGRAAMRAVDDDEEDSGDEAEKLDEKQMNEIDSIY------------------RKAQQGDT-------------------------------------------RLDEMD-----------------------------PP-STFLYTLRPYQKQALTWMNAREKGDSSV-RNESLHPLWEEYLFKKDQLPGEPIEISDDDEQPDSTRKFYWNPYSGELSLKFPTSQNLSRGGILADAMGMGKTCMMASLIHTNREEKPAGNLESQTRDGVEGEID------------------------EEPASKRIKFKQVTLSNQ-------------------------------------------------------------------------------------------------WRAVPTAPKVESFPRATLVVCPVSLAAQWHDELRKM-SQQG-SINSYVWYGGDRVD---IEA-----------LLA--GDGKERVDVIVTSYGTLTSEYQKWLRTKDRP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NYEGGSLYDHEFLRIVLDEAHNIRNRLAMVSKACYELKG-QRRWALTGTPIVNRLEDLYSLLHFLRITPW-GNY-----------------------------------SFFRSFVTVPFLN------QD-HK---ALNVV--QYILE-SCLLR-REKTMRDKD-GR----LIVDLPPKTVEIKVLQFSRAERQIYKFLEERAKKRFIELDADGRAMSNYTSILAMLMKLRQCVDHPLLVLG-KSGEDGELGEK--ILESGAGNGEGNLRDMIAMYAGG---------IRAETPDDVDKAYAAKVLKEL-------GEQEDTPICELCSN-EM--FDEV--------LLPCYHRSCQDCIVEWIGTCEDQNKI---------------------------------------------------------------------------------------------------------------ASCPS--CGKGPIKLADLRSVQ-----------------------------------------------RRHKRVNPITDAYPGGRDPNSKSSNDTTVTLGKV----------------------DLVTSTKLRALLRQLEEI----------------------------------------------------RQEDPK-----AKALVFSQFTSFLDLIEATLT-------KQGIRWLRFDGTMSQAQRANTIEEFGRKTNE-----------------------------------PLILLISLKAGGVGLNLTMANYVFLMDTWWNEAIEQQAIDRVHRLGQNKPVYVTRYIIKGTVEKRIMKI-------------QRS--KTALVN--------------------------------ASLS-------NGAKTKETTLADIKKI-------------------------------------------------------------------------------------------------------------------------------------------FGMDEEDSEGEVY---   [1198]
lcl|Smo_CHR37_366_1_unnamed_protein_product                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSASQEVVEVEDDSGEEEEEEEAEA-----------------------------------------------------------ILVGCLTV--NVVGLRYYHGTVTNGEMVQLVREPTN-PYD--------------------------------------------------SNAIRVLNIR-GDQVGHV----EKNKAMHLAPLVDQNLAFLEGIVPSGSKN---AYRMPCQVHVFSKPA-----------------------LAPAVVDHLDYFGERL------SGGLLEEGAH----------------EGGGGGRASSKTSKRKVLAGAASS----------------------------------------------------------------------APKKPSIDDIF------------------EDLALDCK-------------------------------------------KRQAME-----------------------------PDSSIVKSELMQHQKEALAWMIQREN-------SSALPPFWEIQPPKG-----------------SNTTTMYMNTLTNFTCDKRP---EPLRGGILADDMGLGKTLAVLALVATNRP--GAVLPPVVDIAEELEELE------------------------EQPAAKKRKTTERSKGRDKKASDSGSD----------------------------------------------------------------------------------------DHPPPPCVPKAGGPLATLVVCPLSVLSNWIGQLEDH-TRAG-SLNVCVFHGPDRIK---NAK-----------KLA-------SHDLVFTTYNMLASEW-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NDRNSALRKVHWLRLVLDEAHLVKNPKAQQTKCAISLNA-DRRWAVTGTPIQNNAKDLFSLMQFLHFEPL-SER-----------------------------------TFWNRTIQRPLTS------GQ-PA---GFARS--QGLMS-AISLR-RTKETRVN--GK----KLVDLPPKIVTVFPVDLTPNDRAIYDKMERDGKDIILKYIANGTMTKNYAIVLQIILRLRQLCDHSSMCPG-SMDVLAALGAENQVFVF------------------------LSCAGQIASPE-----LLQKMLAMI----------GDDFDCPICLS-PP--VTAI--------ITRCAHVFCRRCIEKTLERDK--------------------------------------------------------------------------------------------------------------------RQCPM--C-RGDLTISDIYTS--------------------------------------------------------------------------NVGKEQEEAG--------------NDGDGGGGGSSAKITALLSILDKT----------------------------------------------------RAKDPS-----IKTVVFSQFSSMLKLAEAPLT-------QAGYKFVKLQGGMSAKKRDEAMEAFKSRSKD----------------------------------SPTVFLLSLKAAGVGLNLVSASNVVMLDPWWNPAAEEQAMDRVHRLGQTRDVHVFRLVATDSIEERLLQM-------------QEK--KRAYAQ--------------------------------IALG--KE---ASEERRKQCIQEVRLL-------------------------------------------------------------------------------------------------------------------------------------------MQC-------------   [883]
'gi|39940416|ref|XP 359745.1| hypothetical protein MG05032.4 [Magnaporthe grisea 70-15]'                                    MAPPIALETPYY--DQ----------------------------------------M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLSNGSEPPSKKRRFF---SDS--DDEAATQSRRP-------SPP----------------S-------PEIQHRQ--------DTLDTPP--------------TLSNHSAAL--------------------------------GEPL--------N-TITAQETSRPEASLEDIS---------GFDQATFEAVVGVEVKPDILAIIRQQCGSDLERAVNMYFDGTWKNYKLK-P----------------KQKP-TTITSSIR---LNGGDGAKIDQVTSRPA-IRPGAP--GSRYVGAFGV--EGWATRSGTNLLKHGDVVRIERQKIQ-PPK---------------------PPTKGKGATNKLGAAVGGLRVSAAAARRVDVIVRFTDRQ-GTEIGRL----AKDTANWVSTLIDQKVCKFEGTCVYAPERLRTNDTVFIQLRCSLLNE--AFDTRRF--QLSDNRNTGMFEEQETAEERNLRLRQVALV-RLFQEINLMPIRV----------------NEATAKN-----SRQGLLQAAEMDDQKEAQ-PQSTSVENS---------------------------------DSPQSEAEDGK----------ELEQDQLDALY------------------KKAQSFDF-------------------------------------------DTPEAE-----------------------------PA-ETFAMDLRPYQKQSLYWMLAKEKDEAGKDRESSIHPLWEEYQWPTKDFDDQDVPQV------ADQPSFYVNPYSGEMSLEFPAQEQHCLGGILADEMGLGKTIQMLSLIHTHKPHAAAAA---DATALTVNDLQR------------------------------------------------------------------------------------------------------------------------------------------MP--GGGNKVQPAPYTTLVVAPMSLLSQWQSEAENA-SKEG-TLKSIVYYGNDKHA---NLQ-----------ALC--SNPATAPDVIITSYGIVLSEFGQIAGSKSAK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RDGHTGLFSVNFLRVILDEAHNIKNRQAKTSKACYELSA-DHRWVLTGTPIVNRLEDLFSLVRFLRVEPW-NNF-----------------------------------SFWRTFITVPFES------KDFMR---ALDVV--QTVLE-PLVMR-RTKDMKTPS-GQ----PLVALPPKTIEIVDVEFSKTERAVYDHIINRARSAFQKNVEAGTVMKAYTSIFAQILRLRQSCCHPVLVRN-QDIVADEDEAAAAADAVAGLADDMDLHSLIERFTASTDDPAD------A-NA-----FGAHVLSQI--------RDEAANECPICTEEPM--IEQT--------VTGCWHSTCKKCILDYIKHQTDRHEV---------------------------------------------------------------------------------------------------------------PRCVS--C-RQPINERDLFEVVRHDNDVYDDDE---------------------------------------D--------KPGSVFKQKQPDQPRRISLQRVG---------------------VNDSSTKVVALIQHLRDL----------------------------------------------------RRERPR-----AKVVVFSQFTSFLTLIEGSLD-------RANMHHVRLDGTMAQKTRVAVLEEFKACSKF------------------------------------TVFLISLRAGGVGLNLTEASRVYMCDPWWSFSVESQAIDRVHRMGQSEEVKVYRFIVKNSVEERMLKI-------------QDR--KKFIAT---------------------------------SLGMM-----SDDEKRLARIEDIKEL-------------------------------------------------------------------------------------------------------------------------------------------LS--------------   [1166]
'gi|85540719|sp|Q7S1P9|RAD5 NEUCR DNA repair protein rad-5'                                    --------------------------------------------------------M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DFTN--EPLSKKRRFLGDQGDS--DHVAGGPSSSPQFSAPPSSPPRKKLLQDPNSEVQPRVS-------KDADHND--------DDDDDDDDDDEERPRFFTDDGTLTPHATKICAPWLND----------------------MPKPDPR--------K-GYLLKDVDTPIATPRDVAPPVVESPQLAFDKDTFEAFVGEKVASDILHVISKNCGNNIERAVNMYLDGTWKKLHRA-PPVRVNSH---SPLVVGGQSPKKSSTSQAR---SRSHAQAQPQPQSNTPTKVLPSMP--DARYVGAFGV--EGWATRSGTGLLRHGDSVKIERQKIQ-PPT---------------------VARKGQ---TKPGTPQSIPRVSAAAAKRVDVIVRFNDAS-GRELGRL----AKDTANWVSTLIDQNICRFEGICVYAPERLRTNETVFLQLKCYMLRS--AFLGRTL--QLADNRAAGFHEKDETTEEKDLRLRQVALV-RLFQEINIVPSRG----------------NAAAAKD-----ARKDLLEAADSAEKKAMD-KAKAGDHNT--------------------------N----GLASPPEEAEEGQ----------ELEQDQLDALY------------------KKAQSFDF-------------------------------------------STPEAE-----------------------------PA-NTFAMTLRPYQKQSLYWMLAKEKNQRTEDRETSMHPLWEEYVWPTKDHDDKDLPVV------PDQPCFYVNPYSGDLSLDFPKQEQHCLGGILADEMGLGKTIQMLSLIHSHRSEVAIKAREAGPT--SVNNLPR------------------------------------------------------------------------------------------------------------------------------------------LPTVSGQKTTIDAPCTTLVVAPMSLLAQWQSEAENA-SKEG-TFKTMMYYGAEKNV---DLV-----------TMCCEANAANAPDVIITSYGVVLSEFTQLA-TKNGD---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLSSRGLFSLNFFRVILDEAHNIKNRQAKTSRACYEIAA-EHRWVLTGTPIVNRLEDLFSLVRFLRVEPW-NNF-----------------------------------SFWRTFITVPFES------KNFVR---ALDVV--QTVLE-PLVMR-RTKDMKTPD-GQ----FLVPLPPKHIEIVDIELSEPERAVYDYVFNRAKRTLFDNMQAGTVMKAFTSIFAQILRLRQSCCHPVLVRN-QEILADEEEANMAADVAAGLADDMDLQTLIERFTATTDDASK------TNNN-----FGAHVLRQI--------RDEAVNECPICAEEPM--IDQA--------VTGCWHSACKKCLLDYIKHQTDRNEV---------------------------------------------------------------------------------------------------------------PRCFQ--C-REHINIRDIFEVIRHDDDL--ETS---------------------------------------S--------TPGA-------SPEPRISLQRVG---------------------ANDSSAKIVALISHLRTL----------------------------------------------------RQEHPK-----MKSLVISQFTSFLSLISSALT-------RHKISFLRLDGSMSQKARAAVLTEFQSTNKF------------------------------------CVLLLSLKAGGVGLNLTSAKRVYMMDPWWSFAVEAQAIDRVHRMGQEDEVRVYRFIVKQSVEMRMLRV-------------QER--KKFIAT---------------------------------SLGMM-----SDEEKKMQRIEDIKEL-------------------------------------------------------------------------------------------------------------------------------------------LSSD------------   [1222]
'gi|85090635|ref|XP 958511.1| hypothetical protein [Neurospora crassa N150] >gi|32418794|ref|XP 329875.1| hypothetical protein ['    --------------------------------------------------------M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DFTN--EPLSKKRRFLGDQGDS--DHVAGGPSSSPQFSAPPSSPPRKKLLQDPNSEVQPRVS-------KDADHND--------DDDDDDDDDDEERPRFFTDDGTLTPHATKICAPWLND----------------------MPKPDPR--------K-GYLLKDVDTPIATPRDVAPPVVESPQLAFDKDTFEAFVGEKVASDILHVISKNCGNNIERAVNMYLDGTWKKLHRA-PPVRVNSH---SPLVVGGQSPKKSSTSQAR---SRSHAQAQPQPQSNTPTKVLPSMP--DARYVGAFGV--EGWATRSGTGLLRHGDSVKIERQKIQ-PPT---------------------VARKGQ---TKPGTPQSIPRVSAAAAKRVDVIVRFNDAS-GRELGRL----AKDTANWVSTLIDQNICRFEGICVYAPERLRTNETVFLQLKCYMLRS--AFLGRTL--QLADNRAAGFHEKDETTEEKDLRLRQVALV-RLFQEINIVPSRG----------------NAAAAKD-----ARKDLLEAADSAEKKAMD-KAKAGDHNT--------------------------N----GLASPPEEAEEGQ----------ELEQDQLDALY------------------KKAQSFDF-------------------------------------------STPEAE-----------------------------PA-NTFAMTLRPYQKQSLYWMLAKEKNQRTEDRETSMHPLWED--------------------------------------------SQSCI---------TGKTIQMLSLIHSHRSEVAIKAREAGPT--SVNNLPR------------------------------------------------------------------------------------------------------------------------------------------LPTVSGQKTTIDAPCTTLVVAPMSLLAQWQSEAENA-SKEG-TFKTMMYYGAEKNV---DLV-----------TMCCEANAANAPDVIITSYGVVLSEFTQLA-TKNGD---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLSSRGLFSLNFFRVILDEAHNIKNRQAKTSRACYEIAA-EHRWVLTGTPIVNRLEDLFSLVRFLRVEPW-NNF-----------------------------------SFWRTFITVPFES------KNFVR---ALDVV--QTVLE-PLVMR-RTKDMKTPD-GQ----FLVPLPPKHIEIVDIELSEPERAVYDYVFNRAKRTLFDNMQAGTVMKAFTSIFAQILRLRQSCCHPVLVRN-QEILADEEEANMAADVAAGLADDMDLQTLIERFTATTDDASK------TNNN-----FGAHVLRQI--------RDEAVNECPICAEEPM--IDQA--------VTGCWHSACKKCLLDYIKHQTDRNEV---------------------------------------------------------------------------------------------------------------PRCFQ--C-REHINIRDIFEVIRHDDDL--ETS---------------------------------------S--------TPGA-------SPEPRISLQRVG---------------------ANDSSAKIVALISHLRTL----------------------------------------------------RQEHPK-----MKSLVISQFTSFLSLISSALT-------RHKISFLRLDGSMSQKARAAVLTEFQSTNKF------------------------------------CVLLLSLKAGGVGLNLTSAKRVYMMDPWWSFAVEAQAIDRVHRMGQEDEVRVYRFIVKQSVEMRMLRV-------------QER--KKFIAT---------------------------------SLGMM-----SDEEKKMQRIEDIKEL-------------------------------------------------------------------------------------------------------------------------------------------LSSD------------   [1175]
gnl|CMER|CMR259C_probable_DNA_repair_protein_RAD5                                    --------------------------------------------------------M----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRMQTQIGNRHASTPFQSQVGAASSARKRYRGGEAQRRPNSQASHETGAKSRQQHAAERAYSPSATSWEAKTGRLSDGVGSSRRTP-----------------------------------------------------------------------------------------------------------------------------AVGREVFDSPTPESEPASSCASPQDPVE---DMDSLEPWIQKQLVALRAEHGGGTTRWPKYLGSILVPVRATATLEPMAVTSGAELVLKVSPIMS-NGTGSLGRHNRNRQ-----------------------------------RQRLRFAVRVCTAEHGREFGRLEPLEALDLPTCLGALQSANLIIARARAVDCPLHIRFACVFIAEVAIFAAKS--MFSFAAPGERSGRRPAGFDADQEDALTHWIA---------QLFHSLTGSGTDT----------------NETTALSS---DTITHTKARIEAPGERGSASVTKCLRTEA------------------------------------------------------FRPEDAVQWIL------------------AAAENVHV-------------------------------------------DAPPVP-----------------------------VP-PLLASTLRPYQQSALNWMVARERAPSHTPSSDDTQQTWREQRLPD-------------------GTRYFQHRVSGRVSLQPPMTSPAVAGGILADEMGLGKTVEAISLMLANPRPPQEQTRLDRQAALFTKHPE------------------------RVTTESHRENESDTKAGGRRAANAA------------------------------------------------------------------------------------------AAAQTRRSLVDSCCGGTLIVCPMSILSQWCAELNTHVADDA-DFIVHIYYANDRET---DPL-----------VLA-------RFQVVITTYGTLYSTWKSTQQTE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAEARGLYALRWHRLILDEAHVIKNPSSGCSRAVLDLRS-RYRWALTGTPLQNNLEDIYPLLRFLAVEPW-SDA-----------------------------------SLWKRYIARPFES------GQAAKMQAALSLL--SSILQ-PLMLR-RTKRTLDEHTGA----PILELPAKQTEVVYVDLSAAERQLYDAVYKASRARFSTFLADNQITFYLTTVFEMLMRIRQLCDHPLLIMS---------------CPARDLHILQDVQKFMQRLTEGRGSDQATTYLET---------LAGQLQQSLHDERSIESSTNTKPLCPICLE-SI--DDAVA-------LRNCAHVFCRDCILTLLLSNRHGN-----------------------------------------------------------------------------------------------------------------AQCPV--C-RKGCSFADVMST--------------------------------------------------------------------------PRRSRFRVD------------------LERGFFLSTKLARLVNDLVEA----------------------------------------------------VQAFERDPVRHGKCVVFSQWTGMLDLIERALQAWNHEHARTLFQVGRLDGTLSQSRRTAVLEAFATMNPS--------------------------TSAATATGRMNVLLASLRAGGVGLNLTAASSVFLVDPWWNPYVEEQAMDRVHRMGQTRTVQIRRYIVRDSVEERMLLL-------------QDK--KRSMVE--------------------------------DALG--S----SGTENQSSRLADLLLL-------------------------------------------------------------------------------------------------------------------------------------------FSLDAGGATGSRSKRL   [1126]
;
END;


BEGIN CODONS;
	CODESET  * UNTITLED = Universal: all ;
END;


BEGIN ASSUMPTIONS;
	OPTIONS  DEFTYPE=unord PolyTcount=MINSTEPS ;
	EXSET * UNTITLED  =  1-1310 1329-1335 1349-1989 2026 2048-2169 2229-2309 2317 2320-2321 2326-2333 2344-2595 2612-2676 2698-2704 2736-2771 2840-3077;
END;


BEGIN MacClade;
	Version 4.0  87;
	LastModified -1035811168;
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	ListWindow Characters closed Geneva '9' '50' '10' '273' '366' 000;
	ListWindow Taxa closed Geneva '9' '50' '10' '276' '490' 100000000;
	ListWindow Trees closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow TypeSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ;
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	ListWindow CharPartNames closed Geneva '9' '50' '10' '276' '490' ;
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	ChartWindowPosition  '52' '30' '1118' '1540';
	StateNamesSymbols closed Geneva '9' '10' '50' '30' '148' '220';
	WindowOrder  Data;
	OtherSymbols &/ 00 ?-;
	Correlation  '0' '0' '1000' '0' '0' 10011010;
	Salmo 00000001;
	EditorFile  '4';
	ExportHTML _ MOSS  '100' 110000;
	PrettyPrint 10;
	EditorToolsPosition  '1078' '344' '115' '165';
	TreeWindowProgram 10;
	TreeWindow 0000;
	Continuous  '0' '3' 1;
	Calculations 0000001;
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	ChartVerticalAxis 10101;
	ChartMinMax  '0';
	TraceAllChangesDisplay  '1' 1;
	BarsOnBranchesDisplay  '0' '0' '60000' '10000' '10000' '10000' '10000' '60000' '65000' '65000' '65000' '6' '1' 0000101;
	ContinuousBranchLabels 0;
	AllStatesBranchLabels 1;
	IndexNotation  '2' 1;
	PrintTree  10.00 '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' Geneva '9' (normal) Geneva '10' (normal) Geneva '9' (normal) Geneva '9' (normal) Geneva '9' (bold ) Geneva '9' (normal) Geneva '9' (normal) '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '1' '1' '1' '1' '0' '0' '-39' '4' '-40' '0' '1' '2' '1' '8' '0' '0' '0' '2' 1000111000000000000100000111000;
	MatchChar 00 .;
	EntryInterpretation 01;
	ColorOptions 00;
	TreeTools  '0' '5' '4' '0' '10' '4' '0' 00100111111101110;
	EditorTools  '0' '0' '0' '1000' '0' '0' '6' '3' '1' 100010101110011;
	PairAlign  '2' '2' '3' '2' '1' '1' '2' '1' '3' 1010;
	BothTools  '1';
END;