#NEXUS [MacClade 4.08 registered to Tomoaki Nishiyama, National Institute for Basic Biology] BEGIN DATA; DIMENSIONS NTAX=98 NCHAR=1008; FORMAT DATATYPE=PROTEIN SYMBOLS = " 1 2 3 4" MISSING=? GAP=- ; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] 'gi|15233694|ref|NP 195526.1| HD1; histone deacetylase [Arabidopsis thaliana] >gi|31711912|gb|AAP68312.1| At4g38130 [Arabidopsis' --------------------------------------------------------------------------------------------------------------------------------MD-----TGGNSLA--SG-PDGVKRKVCY----------------FYD-PEVGNYYYGQGHPMKPHRIRMTHALLAHYGLL--QHMQVLKPFPARDRDLCRFHADDYVSFLRSITPETQQD--QIRQLKRFNVGE--DCPVFDGLYSFCQTYAGGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH------------------ERVLYVDI-------DIHH--GDGVEEAFYATDRVMTVSFHKFGD-YFPGTGHIQDIGYGSGKYYSLNVPLDDGIDDESYHLLFKP-IMGKVM---EIFRPGA--------VVLQCG-----ADSLSGDRLGCF--NLSIKGHAECVKFMRSFNVPLLL-LGGGGYTIRNVARCWCYETGVALG--VEVEDKMPEHEYYEYFGPDYT-LHVA-PSNMENKNSRQMLEEIRNDLLHNLSKLQHAPSVPFQERPPD-TETPEVD---------------------ED-QEDGDKR-W-----------------------------------DPDSD-MDVDDDRKPIPSR---------------------------VKREAV-------------------------------------------------EPDTKDKDGLKGIMERG--------------------------------------------------------------KGCEVEVDESGSTKVTGVNPVGV----EEASVKMEEEGTNKGGAEQAFPPKT---------------------------------------------------------------------------------------------- [501] 'gi|11066139|gb|AAG28474.1| putative histone deacetylase [Arabidopsis thaliana] >gi|2318131|gb|AAB66486.1| histone deacetylase [' --------------------------------------------------------------------------------------------------------------------------------MD-----TGGNSLA--SG-PDGVKRKVCY----------------FYD-PEVGNYYYGQGHPMKPHRIRMTHALLAHYGLL--QHMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQD--QIRQLKRFNVGE--DCPVFDGLYSFCQTYAGGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH------------------ERVLYVDI-------DIHH--GDGVEEAFYATDRVMTVSFHKFGD-YFPGTGHIQDIGYGSGKYYSLNVPLDDGIDDESYHLLFKP-IMGKVM---EIFRPGA--------VVLQCG-----ADSLSGDRLGCF--NLSIKGHAECVKFMRSFNVPLLL-LGGGGYTIRNVARCWCYETGVALG--VEVEDKMPEHEYYEYFGPDYT-LHVA-PSNMENKNSRQMLEEIRNDLLHNLSKLQHAPSVPFQERPPD-TETPEVD---------------------ED-QEDGDKR-W-----------------------------------DPDSD-MDVDDDRKPIPSR---------------------------VKREAV-------------------------------------------------EPDTKDKDGLKGIMERG--------------------------------------------------------------KGCEVEVDESGSTKVTGVNPVGV----EEASVKMEEEGTNKGGAEQAFPPKT---------------------------------------------------------------------------------------------- [501] 'gi|9022439|gb|AAF82385.1| histone deacetylase [Mesembryanthemum crystallinum]' --------------------------------------------------------------------------------------------------------------------------------MD-----TGGNSLP--SG-PDGVKRKVSY----------------FYD-PEVGNYYYGQGHPMKPHRIRMTHALLAHYGLL--QHMQVLKPVPARDRDLCRFHADDYVSFLRGITPEMQQD--QLRQLKRFNVGE--DCPVFDGLYSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKVH------------------ERVLYVDI-------DIHH--GDGVEEAFYTTERVMTVSFHKFGD-YFPGTETFVYIGYGKGKYYSLNVPLDDGIDDESYQSLFKP-IMGKVM---EIFKPGA--------VVLQCG-----ADSLSGDRLGCF--NLSIKGHAECVKYMISFNVPLLL-VGGGGYTIRYVARCWCYETGVALG--FELDDKIPQHEYYEYFGPDYT-LHVA-PSNMENKNSRPMLDDIRGKLLEYLSSLQHAPSVQFQERPPE-AEIPEED---------------------ED-QHDPEGR-W-----------------------------------DPDSD-MEVDDRSISIRSR---------------------------VKREIM-------------------------------------------------EPDLKDRDDVKDAVDHP--------------------------------------------------------------RDMDVSYGAGNTSVKAPTTSSDQ----PEGCVEMEQDNSNRPPDQGPNMNS----------------------------------------------------------------------------------------------- [500] 'gi|31324093|gb|AAP47171.1| histone deacetylase HDAC1 [Oryza sativa (japonica cultivar-group)] >gi|55296516|dbj|BAD68730.1| hist' --------------------------------------------------------------------------------------------------------------------------------MD-ASAGGGGNSLP-TAG-ADGAKRRVCY----------------FYD-AEVGNYYYGQGHPMKPHRIRMTHALLAHYGLL--DQMQVLKPHPARDRDLCRFHADDYVAFLRSVTPETQQD--QIRALKRFNVGE--DCPVFDGLYSFCQTYAGGSVGGAVKLNHG-HDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYH------------------QRVLYVDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKFGD-YFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKP-IMGKVM---EVFRPGA--------VVLQCG-----ADSLSGDRLGCF--NLSIRGHAECVRFMRSFNVPLLL-LGGGGYTIRNVARCWCYETGVALG--HELTDKMPPNEYFEYFGPDYT-LHVA-PSNMENKNTRQQLDDIRSRLLDNLSKLRHAPSVQFQERPPE-AELPEQD---------------------ED-QEDPDER-H-----------------------------------HADSD-VEMDDVKPLDDSGRRS-----SIQNVR-------------VKRESA-------------------------------------------------ETDAADQDGNRVAAENT--------------------------------------------------------------KGTEPAADGVGSSKQTVPTDASAMAIDEPGSLKVEPDNSNKLQDQPSVHQKT---------------------------------------------------------------------------------------------- [518] 'gi|14550104|gb|AAK67142.1| histone deacetylase HDA101 [Zea mays]' --------------------------------------------------------------------------------------------------------------------------------MDPSSAGSGGNSLP-SVG-PDGQKRRVCY----------------FYD-PDVGNYYYGQGHPMKPHRIRMTHSLLARYGLL--NQMQVYRPNPARDRDLCRFHADDYINFLRSVTPETQQD--QIRLLKRFNVGE--DCPVFDGLYSFCQTYAGASVGGAVKLNHG-HDIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHH------------------ERVLYVDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKFGD-YFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKP-IMGKVM---EVFRPGA--------VVLQCG-----ADSLSGDRLGCF--NLSIKGHAECVRYMRSFNVPLLL-LGGGGYTIRNVARCWCYETGVALG--QEPEDKMPVNEYYEYFGPDYT-LHVA-PSNMENKNTRQQLDDIRSKLLDNLSKLRHAPSVHFQERVPD-TEIPEQD---------------------ED-QDDPDER-H-----------------------------------DPDSD-MEVDDHKAVEESSRR------SILGIK-------------IKREFG-------------------------------------------------ENATRVQDGGRVASEH---------------------------------------------------------------RGLEPMAEDIGSSKQAPQADASAMAIDEPSNVKNEPESSTKLQGQAAAYHKP---------------------------------------------------------------------------------------------- [517] 'gi|55296517|dbj|BAD68731.1| putative histone deacetylase HDAC1 [Oryza sativa (japonica cultivar-group)]' --------------------------------------------------------------------------------------------------------------------------------MD-ASAGGGGNSLP-TAG-ADGAKRRVCY----------------FYD-AEVGNYYYGQGHPMKPHRIRMTHALLAHYGLL--DQMQVLKPHPARDRDLCRFHADDYVAFLRSVTPETQQD--QIRALKRFNVGE--DCPVFDGLYSFCQTYAGGSVGGAVKLNHG-HDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYH------------------QRVLYVDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKFGD-YFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKP-IMGKVM---EVFRPGA--------VVLQCG-----ADSLSGDRLGCF--NLSIRGHAECVRFMRSFNVPLLL-LGGGGYTIRNVARCWCYETGVALG--HELTDKMPPNEYFEYFGPDYT-LHVA-PSNMENKNTRQQLDDIRSRLLDNLSKLRHAPSVQFQERPPE-AELPEQD---------------------ED-QEDPDER-H-----------------------------------HADSD-VEMDDVKPLDDSGRRS-----SIQNVR-------------VKRESA-------------------------------------------------ETDAADQ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VFFY [460] 'gi|2665840|gb|AAC50038.1| putative histone deacetylase RPD3 [Zea mays] >gi|3023947|sp|P56521|HDAC MAIZE Probable histone deacet' --------------------------------------------------------------------------------------------------------------------------------MDPSSAGSGGNSLP-SVG-PDGQKRRVCY----------------FYD-PDVGNYYYGQGHPMKPHRIRMTHSLLARYGLL--NQMQVYRPNPARERELCRFHAEEYINFLRSVTPETQQD--QIRLLKRFNVGE--ECPVLDGLYSFCQTYAGASVGGAVKFNHG-HDIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHH------------------ERVLYVDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKFGD-YFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKP-IMGKVM---EVFRPGA--------VVLQCG-----ADSLSGDRLGCF--NLSIKGHAECVRYMRSFNVPLLL-LGGGGYTIRNVARCWCYETGVALG--QEPEDKMPVNEYYEYFGPDYT-LHVA-PSNMENKNTRQQLDDIRSK----LSKLRHAPSVHFQERVPD-TEIPEQD---------------------ED-QDDPDER-H-----------------------------------DPDSD-MEVDDHKAVEESSRR------SILGIK-------------IKREFG-------------------------------------------------ENATRVQDGGRVASEH---------------------------------------------------------------RGLEPMAEDIGSSKQAPQADASAMAIDEPSNVKNEPESSTKLQGQAAAYHKP---------------------------------------------------------------------------------------------- [513] 'gi|12698880|gb|AAK01712.1| histone deacetylase HD1 [Oryza sativa]' --------------------------------------------------------------------------------------------------------------------------------MD-ASAGGGGNSLP-TAG-ADGAKRRVCH----------------FYD-AEVGNYYCGQGHPMKPHRIRMTHALLAHYGLL--DQMQVLKPHPARDRDLCRFHADDYVAFLRSVTPETQQD--QIRALKRFNVGE--DCPVFDGLYSFCQTYAGGSVGGAVKLNHG-HDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYH------------------QRVLYVDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKFGD-YFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKP-IISKVM---EMYRPGA--------VVLQCG-----ADSLSGDRLGCF--NLSGKGHAECVKFMRSFNVPLLL-LGGGGYAIRNVARCWCYETGVALG--HELTDKMPPNEYFEYFGPEYS-LFVA-ASNMENRNTNKQLEEIKCNILDNLSKLQHAPSVQFEERIPE-TKLPEPD---------------------ED-QEDPDER-H-----------------------------------DPDSD-MVLDDHKPMGHSARS------LIRNIE-------------VKREIT-------------------------------------------------ESEAKDQHGKRLTTEH---------------------------------------------------------------KGPEPMADDPGSSKQAPVSRRLLY-----------PSANP---------------------------------------------------------------------------------------------------------- [493] lcl|Smo_HDA19_3_2_unnamed_protein_product --------------------------------------------------------------------------------------------------------------------------------MD-----GSGNSLA--SG-PEGRSKRVAY----------------FYD-PEVGNYYYGQGHPMKPHRIRMTHSLLVHYGIH--NKLEVLKPLPAKDRDLCRFHADDYVAFLRVITPETQHE--HLRALKRFNVGE--DCPVFDGLYSFCQTYAGGSVGGAVKLNHGHSDIAVNWSGGLHHAKKCEASGFCYVNDIVLAILELLKYH------------------ARVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKFGD-YFPGTGDVRDMGHAKGKYYSLNVPLNDGIDDESYHSLFKP-IITKVM---EVFQPGA--------VVLQCG-----ADSLSGDRLGCF--NLSIKGHAQCVKFMRSFNVPLLL-LGGGGYTIRNVARCWCYETAVAVG--VELEDKMPYNEYYEYFGPDYT-LHVT-PSNMENQNSAQYLESIRNRLLENLSNLQHVPSVPFQERPPD-TDLPEEV---------------------SL-SVASTWR-QSPSARDD--------------RIKKEKEELMDEGSDIDGD-LPKVQQEPQDDQPTAM-------------------------------------------------------------------------------ETDAKAEEKCSSLLPDA-----------------------------------------------------------------------------------------PSAPLASSADTAHEPNEQSTSNTNWQLVTTSTAATAAAMNAR?---------------------------------------------------------------------------- [514] lcl|Ppa_HDA19_1_1_unnamed_protein_product --------------------------------------------------------------------------------------------------------------------------------ME------GGNSLV--AG-PEGRKRRVSY----------------FYD-PDVGNYYYGQGHPMKPHRIRMAHSLLVHYNLH--TRMEVLRPYPARDRDLCRFHADDYVSFLKEVTPETQHD--QMRQLKRFNVGE--DCPVFDGLYNFCQTYAGGSVGGAVKLNHGHSDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKFGD-YFPGTGDVRDIGHGKGKYYSLNVPLDDGIDDESYQSLFKP-IMSKVM---EVFQPGA--------VVLQCG-----ADSLSGDRLGCF--NLSVKGHAECVRFMRSFNVPLLL-VGGGGYTIRNVARCWCYETAVAVG--EELDDRLPHHEYYEYFGPDYS-LHVA-PSNMANQNSKKDIDNLRMKLLENLSKLQHVPSVPFSERPPD-TELPENVFVAFKLNLSFECAFWIMQVFHELIFMTMDSL---------------------------------------------------TLIIECRRMKIWSFVIKVVHGMANYRTP----TLRIMI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [466] 'gi|31324095|gb|AAP47172.1| histone deacetylase HDAC2 [Oryza sativa (japonica cultivar-group)]' --------------------------------------------------------------------------------------------------------------------------------MDPSSAGAGGNSLA-SASCGDAQKRRVCY----------------FYD-PEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLAPAKMQVLRPLPARDRDLCRFHSDDYVAFLRAVTPETQFD--QIRSLRRFNVGE--DCPVFDGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLH------------------ERVLYIDI-------DIHH--GDGVEEAFYTTNRVMTVSFHKFGD-YFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKP-IISKVM---EMYRPGA--------VVLQCG-----ADSLSGDRLGCF--NLSGKGHAECVKFMRSFNVPLLL-LGGGGYTIRNVARCWCYETGVALG--EELREKLPYNEYYEYFGPEYS-LYVA-ASNMENRNTNKQLEEIKCNILDNLSKLQHAPSVQFEERIPE-TKLPEPD---------------------ED-QDDPDER-H-----------------------------------DPDSD-MLLDDHKPMGHSARS------LIHNIG-------------VKREIT-------------------------------------------------ETETKDQHGKRLTTEH---------------------------------------------------------------KVPEPMADDLGSSKQVPVSRRLLY-----------PSANP---------------------------------------------------------------------------------------------------------- [498] 'gi|50906305|ref|XP 464641.1| putative histone deacetylase HDAC3 [Oryza sativa (japonica cultivar-group)] >gi|49387953|dbj|BAD25' --------------------------------------------------------------------------------------------------------------------------------MDPSSAGAGGNSLA-SASCGDAQKRRVCY----------------FYD-PEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLAPAKMQVLRPLPARDRDLCRFHSDDYVAFLRAVTPETQFD--QIRSLRRFNVGE--DCPVFDGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLH------------------ERVLYIDI-------DIHH--GDGVEEAFYTTNRVMTVSFHKFGD-YFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKP-IISKVM---EMYRPGA--------VVLQCG-----ADSLSGDRLGCF--NLSGKGHAECVKFMRSFNVPLLL-LGGGGYTIRNVARCWCYETGVALG--EELREKLPYNEYYEYFGPEYS-LYVA-ASNMENRNTNKQLEEIKCNILDNLSKLQHAPSVQFEERIPE-TKLPEPD---------------------ED-QDDPDER-H-----------------------------------DPDSD-MLLDDHKPMGHSARS------LIHNIG-------------VKREIT-------------------------------------------------ETETKDQHGKRLTTEH---------------------------------------------------------------KVPEPMADDLGSSKQVPTADANSMAINAPGNAKNEPGSSL---------------------------------------------------------------------------------------------------------- [509] 'gi|50906299|ref|XP 464638.1| histone deacetylase HDAC3 [Oryza sativa (japonica cultivar-group)] >gi|31324097|gb|AAP47173.1| his' --------------------------------------------------------------------------------------------------------------------------------MDPSSAGAGGNSLA-SASCGDAQKRRVCY----------------FYD-PEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLAPAKMEVLRPLPARGIDLCRFHSDDYVAFLRAVTPETQLG--QVRALRRFNIGP--DCPVFDGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLH------------------ERVLYIDI-------DIHH--GDGVEEAFYTTNRVMTVSFHKFGD-YFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKP-IISKVM---EMYRPGA--------VVLQCG-----ADSLSGDRLGCF--NLSGKGHAECVKFMRSFNVPLLL-LGGGGYTIRNVARCWCYETGVALG--EELQEKLPYNEYYEYFGPEYS-LYVA-ASNMENRNTNKQLEEIKCNILDNLSKLQHAPSVQFQERIPE-TKLPEPD---------------------ED-QEDPDER-H-----------------------------------DPDSD-MVLDDHKPTGHSARS------LIHNIG-------------VKREIT-------------------------------------------------ETETKDQHGKRLTTEH---------------------------------------------------------------KGPEPMAEDLGSSKQAPTADANAVAVNAPGNARNEPGSSPK--------------------------------------------------------------------------------------------------------- [510] 'gi|50906301|ref|XP 464639.1| putative histone deacetylase HDAC3 [Oryza sativa (japonica cultivar-group)]' --------------------------------------------------------------------------------------------------------------------------------MDPSSAGAGGNSLA-SASCGDAQKRRVCY----------------FYD-PEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLAPAKMEVLRPLPARGIDLCRFHSDDYVAFLRAVTPETQLG--QVRALRRFNIGP--DCPVFDGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLH------------------ERVLYIDI-------DIHH--GDGVEEAFYTTNRVMTVSFHKFGD-YFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKP-IISKVM---EMYRPGA--------VVLQCG-----ADSLSGDRLGCF--NLSGKGHAECVKFMRSFNVPLLL-LGGGGYTIRNVARCWCYEV---------------------------------------------------CNL-----------------------------------------------------------------------------------------------------------------------------------------------IRRQN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [341] lcl|Ppa_HDA19_8_1_unnamed_protein_product ---------------------------------------------------------------------------------------------------------------------------------------MGSKAAVTGYK-IRGRKRRVSY----------------FYD-PDVGNYYYGQGHPMKPHRIRMAHSLLVHYNLH--TRMEVLRPYPARDRDLCRFHADDYVSFLKEVTPETQHD--QMRQLKRFNVGE--DCPVFDGLYNFCQTYAGGSVGGAVKLNHGHSDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQFFGYRKVLNKVGLKLYMQRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKFGD-YFPGTGDVRDIGYGKGKYYSLNVPLDDGIDDESYQSLFKP-IMSKVM---EVFQPGA--------VVLQCG-----ADSLSGDRLGCF--NLSVKGHAECVRFMRSFNVPLLL-VGGGGYTIRNVARCWCYETAVAVG--EELDDKLPHHEYYEYFGPDYS-LHVA-PSNMANQNSKKDLDNLRMKLLDNLSKLQHVPSVPFSERPPD-TELPENED--------------------ED-LELRDKG------------------------RAWDGE-----LSESDSEEHDLRRRSQGIVASEAAF------------------------------------------------------------------------------ARRPPPLGSVRGKSEED-----------------------------------------------------------------------------------AGEAMSSDDEIEMEDETGKGPEDSKDAAEE----------------------------------------------------------------------------------------------- [508] lcl|Smo_HDA19_4_2_unnamed_protein_product --------------------------------------------------------------------------------------------------------------------------------MD-----GSGNSLA--SG-PEGRSKRVAY----------------FYD-PEVGNYYYGQGHPMKPHRIRMTHSLLVHYGIH--NKLEVLKPLPAKDRDLCRFHADDYVAFLRVITPETQHE--HLRALKRFNVGE--DCPVFDGLYSFCQTYAGGSVGGAVKLNHGHSDIAVNWSGGLHHAKKCEASGFCYVNDIVLAILELLKYH------------------ARVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKFGD-YFPGTGDVRDMGHAKGKYYSLNVPLNDGIDDESYHSLFKP-IITK------------------------CG-----ADSLSGDRLGCF--NLSIKGHAQCVKFMRSFNVPLLL-LGGGGYTIRNVARCWCYETAVAVG--VELEDKMPYNEYYEYFGPDYT-LHVT-PSNMENQNSAQYLESIRNRLLENLSNLQHVPSVPFQERPPD-TDLPEEV---------------------SL-SVASTWR-QSPSARDD--------------RIKKEKEELMDEGSDIDGD-LPKAQQEPQDDQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [437] lcl|Smo_HDA19_1_1_unnamed_protein_product --------------------------------------------------------------------------------------------------------------------------------MD-----GSGNSLAGSVG-GDGSKRRVSY----------------FYD-PEVGNYYYGQGHPMKPHRMRMTHSLLVHYGLH--LKMEVVEPFRARDKDLCKFHADDYVDFLKQVTPETQQE--FAKVLKRFNVGE--DCPVFDGLYSFCQMYTGGSVGGAVRLNTNRSDIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKQH------------------QRVLYIDI-------DVHH--GDGVEEAFYTTDRVMTVSFHKFGD-FFPGTGDLRDVGHGKGKYYSVNVPLNEGIDDESYQRLFKP-VISKVM---EVYQPGA--------IVLQCG-----ADSLSGDRLGCF--NLSVKGHAECVRFVRSFNVPLLL-VGGGGYT-----------TGVAVG--VELENQMPYNDYYEYFGPEYT-LLVP-ASNKENANSPEYLDSLRQQLLENISKLQHAPSVPFYERPPD-MEPGEEM----------------------E-EDDADAR----PTRPK--------------PGVWNGE-----PVDSDSE----------GEGDVHRQRQRLPKQELDFISRKLPPSEEPAVKRPKF-------------------------------------------------DEAQQWQQRLRLAQLEGVLSQKSPKAIGHVLAM-VKATQDKAMQNWRIG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [505] lcl|Smo_HDA19_6_1_unnamed_protein_product --------------------------------------------------------------------------------------------------------------------------------MD-----GSGNSLAGSVG-GDGSKRRVSY----------------FYD-PEVGNYYYGQGHPMKPHRMRMTHSLLVHYGLH--LKMEVVEPFRARDKDLCKFHADDYVDFLKQVTPETQQE--FAKVLKRFNVGE--DCPVFDGLYSFCQMYTGGSVGGAVRLNTNRSDIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKQH------------------QRVLYIDI-------DVHH--GDGVEEAFYTTDRVMTVSFHKFGD-FFPGTGDLRDVGHGKGKYYSVNVPLNEGIDDESYQRLFKP-VISKVM---EVYQPGA--------IVLQCG-----ADSLSGDRLGCF--NLSVKGHAECVRFVRSFNVPLLL-VGGGGYT-----------TGVAVG--VELENQMPYNDYYEYFGPEYT-LLVP-ASNKENANSPEYLDSLRQQLLENISKLQHAPSVPFYERPPD-MEPGEEMVLMSFEIPELLLTLCSF----QE-ENDADAR----PTKPK--------------PGVWNGE-----PVDSDSE----------GEGDVH--RQRLPKQELDFISRKLPPSEEPVVKRPKF-------------------------------------------------DERTEEQRDDDIA---------TSLSLGPAMAAEIKIS----------S-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [503] 'gi|50944529|ref|XP 481792.1| putative histone deacetylase [Oryza sativa (japonica cultivar-group)] >gi|38637022|dbj|BAD03280.1|' --------------------------------------------------------------------------------------------------------------------------------MA---ASGEGASLASAAGGEDGRRRRVSY----------------FYE-PSIGDYYYGQGHPMKPHRIRMAHSLVVHYGLH--RLLELSRPYPASDADIRRFHSDDYVAFLASATGNPALL--DARAVKRFNVGE--DCPVFDGLFPFCQASAGGSIGAAVKLNRGDADITVNWAGGLHHAKKGEASGFCYVNDIVLAILELLKFH------------------RRVLYVDI-------DVHH--GDGVEEAFFTTNRVMTCSFHKYGD-FFPGTGHITDVGAGEGKHYALNVPLSDGIDDDTFRDLFQC-IIKKVM---EVYQPDV--------VVLQCG-----ADSLAGDRLGCF--NLSVKGHADCLRYLRSFNIPMMV-LGGGGYTIRNVARCWCYETAVAVG--VEPDNKLPYNDYYEYFGPDYN-LHIQ-PRSVENLNSTKDLENIKSMILDHLSKIEHVPSTQFHDRPSD-PEAPEQE------------------------EEDMDKR-PPQRSRLW------------------SGG-----AYESDTEDPDNMKTETNDLSASSVMKDESNDDS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [458] 'gi|4193320|gb|AAD10139.1| histone deacetylase [Zea mays]' --------------------------------------------------------------------------------------------------------------------------------MA---ASGEGVSLPSPAGGEDAHRRRVSY----------------FYE-PSIGDYYYGQGHPMKPHRIRMAHSLVVHYGLH--RLLELSRPYPASEADIRRFHSDDYVAFLASATGNPGVL--DPRAIKRFNVGE--DCPVFDGLFPFCQASAGGSIGAAVKLNRGDADITVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKFH------------------RRVLYVDI-------DVHH--GDGVEEAFFTTNRVMTVSFHKYGD-FFPGTGHITDVGAAEGKHYALNVPLSDGIDDTTFRGLFQC-IIKKVM---EVYQPDV--------VVLQCG-----ADSLAGDRLGCF--NLSVKGHADCLRFLRSYNVPMMV-LGGGGYTIRNVARCWCYETAVAVG--VEPDNKLPYNDYYEYFGPDYT-LHIQ-PKSVENLNTTKDLENIKNMILENLSKIEHVPSTQFHDRPSD-PEAPEEK------------------------EEDMDKR-PPQRSRLW------------------SGG-----AYDSDTEDPDSLKSEGKDVTANFQMKDEPKDDL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [458] 'gi|17017398|gb|AAL33653.1| histone deacetylase [Zea mays]' ---------------------------------------------------------------------------------------------------------------------------------------------------------RVSY----------------FYE-PSIGDYYYGQGHPMKPHRIRMAHSLVVHYGLH--RLLELSRPYPASEADIRRFHSDDYVAFLASATGNPGVL--DPRAIKRFNVGE--DCPVFDGLFPFCQASAGGSIGAAVKLNRGDADITVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKFH------------------RRVLYVDI-------DVHH--GDGVEEAFFTTNRVMTVSFHKYGD-FFPGTGHITDVGAAEGKHYALNVPLSDGIDDTTFRGLFQC-IIKKVM---EVYQPDV--------VVLQCG-----ADSLAGDRLGCF--NLSVKGHADCLRFLRSYNVPMMV-LGGGGYTIRNVARCWCYETAVAVG--VEPDNKLPYNDYYEYFGPDYT-LHIQ-PKSVENLNTTKDLENIKNMILENLSKIEHVPSTQFHDRPSD-PEAPEEK------------------------EEDMDKR-PPQRSRLW------------------SGG-----AYDSDTEDPDSLKSEGKDVTANFQMKDEPKDDL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [436] 'gi|52548252|gb|AAU82113.1| histone deacetylase [Triticum aestivum]' --------------------------------------------------------------------------------------------------------------------------------MA---ASGEGASLPSPAGGEDSRRRRVSY----------------FYE-PTIGDYYYGQGHPMKPHRIRMAHSLVIHYGLH--RLLELSRPFPASEADISRFHSDEYVSFLASATGNPTIL--DPRAVKRFNVGE--DCPVFDGLFPFCQASAGGSIGAAVKLNRGDADITVNWAGGLHHAKKGEASGFCYVNDIVLAILELLKFH------------------RRVLYVDI-------DVHH--GDGVEEAFFTTNRVMTVSFHKYGD-FFPGTGHITDVGAGEGKHYAVNVPLSDGIDDDTFRDLFQC-IIKRVM---EVYQPEV--------VVLQCG-----ADSLAGNRLGCF--NLSVKGHADCLRFLRSFNIPMMV-LGGGGYTIRNVARCWCYETAVAVG--VEPDNKLPYNDYYEYFGPDYN-LHIQ-PRIVENLNTTKDLENIKNMILDHLSKLEHVPNAQFHERPSD-PEGPEEK------------------------EEDMDKR-PAQRSRLW------------------SGG-----AYDSDTEDPDNMKTEANDLSANSIMKDASNDDL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [458] 'gi|15242626|ref|NP 201116.1| HDA6 (HISTONE DEACETYLASE 6); histone deacetylase [Arabidopsis thaliana] >gi|23296897|gb|AAN13198.' --------------------------------------------------------------------------------------------------------------------------------ME---ADESGISLPSG---PDGRKRRVSY----------------FYE-PTIGDYYYGQGHPMKPHRIRMAHSLIIHYHLH--RRLEISRPSLADASDIGRFHSPEYVDFLASVSPESMGDPSAARNLRRFNVGE--DCPVFDGLFDFCRASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMF------------------KRVLYIDI-------DVHH--GDGVEEAFYTTDRVMTVSFHKFGD-FFPGTGHIRDVGAEKGKYYALNVPLNDGMDDESFRSLFRP-LIQKVM---EVYQPEA--------VVLQCG-----ADSLSGDRLGCF--NLSVKGHADCLRFLRSYNVPLMV-LGGGGYTIRNVARCWCYETAVAVG--VEPDNKLPYNEYFEYFGPDYT-LHVD-PSPMENLNTPKDMERIRNTLLEQLSGLIHAPSVQFQHTPPV-NRVLDEP------------------------EDDMETR-PKPRIWSG-------------------TA-----TYESDSDDDDKPLHGYSCRGGATTDRDSTGEDEMD------DDNPEPDVNPPSS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [471] 'gi|11066141|gb|AAG28475.1| putative histone deacetylase [Arabidopsis thaliana]' --------------------------------------------------------------------------------------------------------------------------------ME---ADESGISLPSG---PDGRKRRVSY----------------FYE-PTIGDYYYGQGHPMKPHRIRMAHSLIIHYHLH--RRLEISRPSLADASDIGRFHSPEYVDFLASVSPESMGDPSAARNLRRFNVGE--DCPVFDGLFDFCRASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMF------------------KRVLYIDI-------DVHH--GDGVEEAFYTTDRVMTVSFHKFGD-FFPGTGHIRDVGAEKGKYYALNVPLNDGMDDESFRSLFRP-LIQKVM---EVYQPEA--------VVLQCG-----ADSLSGDRLGCF--NLSVKGHADCLRFLRSYNVPLMV-LGGEGYTIRNVARCWCYETAVAVG--VEPDNKLPYNEYFEYFGPDYT-LHVD-PSPMENLNTPKDMERIRNTLLEQLSGLIHAPSVQFQHTPPV-NRVLDEP------------------------EDDMETR-PKPR?WSG-------------------TA-----TYESDSDDDDKPLHGYSCRGGATTDRDSTGEDEMD------DDNPEPDVNPPSS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [471] 'gi|81294220|gb|AAI08089.1| Histone deacetylase 1 [Bos taurus] >gi|82697313|ref|NP 001032521.1| histone deacetylase 1 [Bos tauru' --------------------------------------------------------------------------------------------------------------------------------MA-------------Q---TQGTKRKVCY----------------YYD-GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMSKVM---EMFQPSA--------VVLQCG-----SDSLSGDRLGCF--NLTIKGHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCWTYETAVALD--TEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AIPEESGD--------------------ED-EEDPDKR-ISICSSDK--------------RIACEEE-----FSDSDEE----------GEGGRKN-----SSNFKK-------------AKRVKT-------------------------------------------------EDEKEKDPE----------------------------------------------------------------------EKK----EVTEEEKTK-------------------EEKQEAKG------VKEEV-------KLA---------------------------------------------------------------------------------- [482] 'gi|6680193|ref|NP 032254.1| histone deacetylase 1 [Mus musculus] >gi|1771286|emb|CAA66870.1| histone deacetylase [Mus musculus]' --------------------------------------------------------------------------------------------------------------------------------MA-------------Q---TQGTKRKVCY----------------YYD-GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMSKVM---EMFQPSA--------VVLQCG-----SDSLSGDRLGCF--NLTIKGHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCWTYETAVALD--TEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AIPEESGD--------------------ED-EEDPDKR-ISICSSDK--------------RIACEEE-----FSDSDEE----------GEGGRKN-----SSNFKK-------------AKRVKT-------------------------------------------------EDEKEKDPE----------------------------------------------------------------------EKK----EVTEEEKTK-------------------EEKPEAKG------VKEEV-------KLA---------------------------------------------------------------------------------- [482] 'gi|67678279|gb|AAH97943.1| Histone deacetylase 1 [Rattus norvegicus] >gi|70794768|ref|NP 001020580.1| histone deacetylase 1 [Ra' --------------------------------------------------------------------------------------------------------------------------------MA-------------Q---TQGTKRKVCY----------------YYD-GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMSKVM---EMFQPSA--------VVLQCG-----SDSLSGDRLGCF--NLTIKGHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCWTYETAVALD--TEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AIPEESGD--------------------ED-EEDPDKR-ISICSSDK--------------RIACEEE-----FSDSDEE----------GEGGRKN-----SSNFKK-------------AKRVKT-------------------------------------------------EDEKEKDPE----------------------------------------------------------------------EKK----EVTEEEKTK-------------------EEKPEAKG------VKEEV-------KMA---------------------------------------------------------------------------------- [482] 'gi|82994453|ref|XP 930837.1| PREDICTED: skip [Mus musculus]' --------------------------------------------------------------------------------------------------------------------------------MA-------------Q---TQGTKRKVCY----------------YYD-GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEATFKP-VMSKVM---EMFQPSA--------VVLQCG-----SDSLSGDRLGCF--NLTIKGHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCWTYETAVALD--TEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AIPEESGD--------------------ED-EEDPDKR-ISICSSDK--------------RIACEEE-----FSDSDEE----------GEGGRKN-----SSNFKK-------------AKRVKT-------------------------------------------------EDEKEKDPE----------------------------------------------------------------------EKK----EVTEEEKTK-------------------EEKPEAKG------VKEEV-------KLA---------------------------------------------------------------------------------- [482] 'gi|73949981|ref|XP 544435.2| PREDICTED: similar to histone deacetylase 1 isoform 1 [Canis familiaris]' --------------------------------------------------------------------------------------------------------------------------------MA-------------Q---TQGTRRKVCY----------------YYD-GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMSKVM---EMFQPSA--------VVLQCG-----SDSLSGDRLGCF--NLTIKGHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCWTYETAVALD--TEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQVIPED-AIPEESGD--------------------ED-EEDPDKR-ISICSSDK--------------RIACEEE-----FSDSDEE----------GEGGRKN-----SSNFKK-------------AKRVKT-------------------------------------------------EDEKEKDPE----------------------------------------------------------------------EKK----EVTEEEKTK-------------------EEKQEAKG------VKEEV-------KLA---------------------------------------------------------------------------------- [482] 'gi|55630864|ref|XP 519834.1| PREDICTED: similar to histone deacetylase 1; reduced potassium dependency, yeast homolog-like 1 [P' --------------------------------------------------------------------------------------------------------------------------------MA-------------Q---TQGTRRKVCY----------------YYD-GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMSKVM---EMFQPSA--------VVLQCG-----SDSLSGDRLGCF--NLTIKGHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCWTYETAVALD--TEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AIPEESGD--------------------ED-EEDPDKR-ISICSSDK--------------RIACEEE-----FSDSEEE----------GEGGRKN-----SSNFKK-------------AKRVKT-------------------------------------------------EDEKEKDPE----------------------------------------------------------------------EKK----EVTEEEKTK-------------------EEKPEAKG------VKEEV-------KLA---------------------------------------------------------------------------------- [482] 'gi|55716026|gb|AAH85375.1| Histone deacetylase 1 [Danio rerio]' --------------------------------------------------------------------------------------------------------------------------------MA-------------L-S-SQGTKKKVCY----------------YYD-GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSAGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-IMSKVM---EMYQPSA--------VVLQCG-----ADSLSGDRLGCF--NLTIKGHAKCVEYMKSFNLPLLM-LGGGGYTIRNVARCWTFETAVALD--STIPNELPYSDYFEYFGPDFK-LHIS-PSNMTNQNTNDYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AVQEDSGD--------------------EE--DDPDKR-ISIRAHDK--------------RIACDEE-----FSDSEDE----------GQGGRRN-----AANYKK-------------PKRVKT-------------------------------------------------EEEKDG--E----------------------------------------------------------------------EKK----DVKEEEKAS-------------------EEKMDTKG------PKEEL-------KTV---------------------------------------------------------------------------------- [480] 'gi|30583783|gb|AAP36140.1| Homo sapiens histone deacetylase 1 [synthetic construct] >gi|61369536|gb|AAX43347.1| histone deacety' --------------------------------------------------------------------------------------------------------------------------------MA-------------Q---TQGTRRKVCY----------------YYD-GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMSKVM---EMFQPSA--------VVLQCG-----SDSLSGDRLGCF--NLTIKGHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCWTYETAVALD--TEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AIPEESGD--------------------ED-EDDPDKR-ISICSSDK--------------RIACEEE-----FSDSEEE----------GEGGRKN-----SSNFKK-------------AKRVKT-------------------------------------------------EDEKEKDPE----------------------------------------------------------------------EKK----EVTEEEKTK-------------------EEKPEAKG------VKEEV-------KLAL--------------------------------------------------------------------------------- [483] 'gi|12653071|gb|AAH00301.1| Histone deacetylase 1 [Homo sapiens] >gi|48479080|gb|AAT44863.1| histone deacetylase 1 [Homo sapiens' --------------------------------------------------------------------------------------------------------------------------------MA-------------Q---TQGTRRKVCY----------------YYD-GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMSKVM---EMFQPSA--------VVLQCG-----SDSLSGDRLGCF--NLTIKGHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCWTYETAVALD--TEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AIPEESGD--------------------ED-EDDPDKR-ISICSSDK--------------RIACEEE-----FSDSEEE----------GEGGRKN-----SSNFKK-------------AKRVKT-------------------------------------------------EDEKEKDPE----------------------------------------------------------------------EKK----EVTEEEKTK-------------------EEKPEAKG------VKEEV-------KLA---------------------------------------------------------------------------------- [482] 'gi|19526271|gb|AAL89665.1| histone deacetylase [Takifugu rubripes]' --------------------------------------------------------------------------------------------------------------------------------MA-------------L-T-SQGTKKKVCY----------------YYD-GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKANGEEMTKYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSVGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-IMAKVM---EMYQPSA--------VVLQCG-----ADSLSGDRLGCF--NLTIKGHAKCVEYMKSFNLPLLM-LGGGGYTIRNVARCWTYETAVALD--ASIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTNDYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AVQEDSGD--------------------EE-AEDHNKR-ISIRAHDK--------------RIACEEE-----FSDSEDE----------GEGGRRN-----SVSFKK-------------AKRAKT-------------------------------------------------EGEKEGEEK----------------------------------------------------------------------EKK----EVKEEEKVP-------------------EE------------PKEES-------KTP---------------------------------------------------------------------------------- [477] 'gi|2827430|gb|AAB99850.1| histone deacetylase 1 [Gallus gallus]' --------------------------------------------------------------------------------------------------------------------------------MA-------------V---MQGTKRKVCY----------------YYD-GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VISKVM---ETFQPSA--------VVLQCG-----SDSLSGDRLGCF--NLTIKGHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCWTYETAVALD--TEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQPIPED-AVQEDSGD--------------------EE-EEDPEKR-ISIRNSDK--------------RISCDEE-----FSDSEDE----------GEGGRKN-----VANFKK-------------AKRVKT-------------------------------------------------EEEKEE--E----------------------------------------------------------------------EKK----DEKEEEKAK-------------------EEKAEPKG------VKEET-------KST---------------------------------------------------------------------------------- [480] 'gi|2829214|gb|AAC00504.1| erythrocyte histone deacetylase [Gallus gallus] >gi|2791684|gb|AAB96923.1| histone deacetylase-1; HD-' --------------------------------------------------------------------------------------------------------------------------------MA-------------L---TQGTKRKVCY----------------YYD-GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VISKVM---ETFQPSA--------VVLQCG-----SDSLSGDRLGCF--NLTIKGHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCWTYETAVALD--TEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQPIPED-AVQEDSGD--------------------EE-EEDPEKR-ISIRNSDK--------------RISCDEE-----FSDSEDE----------GEGGRKN-----VANFKK-------------AKRVKT-------------------------------------------------EEEKEE--E----------------------------------------------------------------------EKK----DEKEEEKAK-------------------EEKAEPKG------VKEET-------KST---------------------------------------------------------------------------------- [480] 'gi|27545221|ref|NP 775343.1| histone deacetylase 1 [Danio rerio] >gi|21105403|gb|AAM34645.1| histone deaceytlase 1 [Danio rerio' --------------------------------------------------------------------------------------------------------------------------------MA-------------L-S-SQGTKKKVCY----------------YYD-GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-IMSKVM---EMYQPSA--------VVLQCG-----ADSLSGDRLGCF--NLTIKGHAKCVEYMKSFNLPLLM-LGGGGYTIKNVARCWTFETAVALD--STIPNELPYNDYFEYFGPDFK-LHIS-PFNMTNQNTNDYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AVQEDSGD--------------------EE--DDPDKR-ISIRAHDK--------------RIACDEE-----FSDSEDE----------GQGGRRN-----AANYKK-------------PKRVKT-------------------------------------------------EEEKDG--E----------------------------------------------------------------------EKK----DVKEEEKAS-------------------EEKMDTKG------PKEEL-------KTV---------------------------------------------------------------------------------- [480] 'gi|1665723|dbj|BAA08909.1| RPD3 protein [Homo sapiens] >gi|60819522|gb|AAX36503.1| histone deacetylase 1 [synthetic construct]' --------------------------------------------------------------------------------------------------------------------------------MA-------------Q---TQGTRRKVCY----------------YYD-GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMSKVM---EMFQPSA--------VVLQCG-----SDSLSGDRLGCF--NLTIKGHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCRTYETAVALD--TEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AIPEESGD--------------------ED-EDDPDKR-ISICSSDK--------------RIACEEE-----FSDSEEE----------GEGGRKN-----SSNFKK-------------AKRVKT-------------------------------------------------EDEKEKDPE----------------------------------------------------------------------EKK----EVTEEEKTK-------------------EEKPEAKG------VKEEV-------KLA---------------------------------------------------------------------------------- [482] 'gi|60688073|gb|AAH90604.1| Hdac1 predicted-prov protein [Xenopus tropicalis] >gi|71896231|ref|NP 001025564.1| hdac1 predicted-p' --------------------------------------------------------------------------------------------------------------------------------MA-------------L---SQGTKKKVCY----------------YYD-GDVGNYYYGQGHPIKPHRIRMTHNLLLNYGLY--RKMEIYRPHKASAEEMTKYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASSVKLNKQQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMSKVM---EMYQPSA--------VVLQCG-----ADSLSGDRLGCF--NLTIKGHAKCVEFIKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALD--SEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-SVHDDSGE--------------------ED-EEDPDKR-ISIRSSDK--------------RIACDEE-----FSDSEDE----------GEGGRRN-----VASFKK-------------VKRVKT-------------------------------------------------EEEKDG--E----------------------------------------------------------------------EKK----DVKEEEKPK-------------------DEKTDSKR------VKEET-------KSA---------------------------------------------------------------------------------- [480] 'gi|3023928|sp|O42227|HDA1B XENLA Probable histone deacetylase 1-B (HD1) (RPD3 homolog) >gi|2444430|gb|AAC60346.1| deacetylase [' --------------------------------------------------------------------------------------------------------------------------------MA-------------L---SQGTKKKVCY----------------YYD-GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKASAEEMTKYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVVYIDI-------DIHH--GDGVEEAFYTTDRVMSVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMTKVM---EMFQPSA--------VVLQCG-----ADSLSGDRLGCF--NLTIKGHAKCVEFIKTFNLPMLM-LGGGGYTIRNVARCWTYETAVALD--SEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-SVHDDSGE--------------------ED-EEDPDKR-ISIRSSDK--------------RIACDEE-----FSDSEDE----------GEGGRKN-----VANFKK-------------VKRVKT-------------------------------------------------EEEKEG--E----------------------------------------------------------------------DKK----DVKEEEKAK-------------------DEKTDSKR------VKEET-------KSV---------------------------------------------------------------------------------- [480] 'gi|27735466|gb|AAH41296.1| MGC53583 protein [Xenopus laevis]' --------------------------------------------------------------------------------------------------------------------------------MA-------------L---SQGTKKKVCY----------------YYD-GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKASAEEMTKYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVVYIDI-------DIHH--GDGVEEAFYTTDRVMSVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMTKVM---EMFQPSA--------VVLQCG-----ADSLSGDRLGCF--NLTIKGHAKCVEFIKTFNLPMLM-LGGGGYTIRNVARCWTYETAVALD--SEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-SVHDDSGE--------------------ED-EEDPDKR-ISIRSSDK--------------RIACDEE-----FSDSEDE----------GEGGRRN-----MASFKK-------------LKRVKT-------------------------------------------------EEEKEA--D----------------------------------------------------------------------DKK----DVKEEEKLK-------------------DDKTDSKR------VKEET-------KSA---------------------------------------------------------------------------------- [480] 'gi|51704120|gb|AAH81136.1| AB21 protein [Xenopus laevis] >gi|602098|emb|CAA55211.1| yeast RPD3 homologue [Xenopus laevis] >gi|3' --------------------------------------------------------------------------------------------------------------------------------MA-------------L---TLGTKKKVCY----------------YYD-GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIFRPHKASAEDMTKYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVVYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYALRDGIDDESYEAIFKP-VMSKVM---EMFQPSA--------VVLQCG-----ADSLSGDRLGCF--NLTIKGHAKCVEFIKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALD--SEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAVAED-SIHDDSGE--------------------ED-EDDPDKR-ISIRSSDK--------------RIACDEE-----FSDSEDE----------GEGGRKN-----VANFKK-------------VKRVKT-------------------------------------------------EEEKEG--E----------------------------------------------------------------------DKK----DVKEEEKAK-------------------DEKTDSKR------VKEET-------KSV---------------------------------------------------------------------------------- [480] 'gi|47551069|ref|NP 999711.1| histone deacetylase [Strongylocentrotus purpuratus] >gi|2654077|gb|AAB87685.1| histone deacetylase' --------------------------------------------------------------------------------------------------------------------------------M----------------A-STGTKKRVCY----------------YYD-GDVGNYYYGQGHPMKPHRIRMTHNLILNYGLY--RKMEIYRPHKAVMEEMTKYHSDDYVKFLRTIRPDNMSE--YTKQMQRFNVGE--DCPVFDGLYEFCQLSSGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYDKIFKP-IMCKVM---EMYQPSA--------ICLQCG-----ADSLSGDRLGCF--NLTLKGHAKCVEFMKQYNLPLLL-MGGGGYTIRNVARCWTYETSTALG--VEIANELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTGEYLDKIKTRLYENMRMIPHAPGVQMQPIPED-AIPDDSDA--------------------EDEAENPDKR-ISIMAQDK--------------RIQRDDE-----FSDSEDE-GETRL---PGEGGRRD-----HRSHK--------------AKRSKI-------------------------------------------------DDSPGKEAD----------------------------------------------------------------------KEA----KSSDASKEA-------------------KPAAEPQA------VPMDTTPAPPPKKSEDKPEASKPTEVKAKPAEKEPGEGEASPADLVVPVPKVSAPSEGATLPAVTIPPSSGTSQPPADPPVSAPTPTPASAPAEKQD [576] 'gi|47213589|emb|CAF93492.1| unnamed protein product [Tetraodon nigroviridis]' --------------------------------------------------------------------------------------------------------------------------------MA-------------YTT-ATGTKKKVCY----------------YYD-GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKATAEEMTKYHSDDYIKFLRSIRPDNMSE--FSKQMQRFNVGE--DCPVFDGLFEFCQLSAGGSAAGSVKLNRQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYEHIFKP-VMAKVM---EMYQPSA--------VVLQCG-----ADSLSGDRLGCF--NLTIRGHAKCVEYMKSFNLPLLM-LGGGGYTIRNVARCWTYETAVALD--TDIPDELPYNDYFEYFGPDFKAAHSV-HRNMTNQNTQEYMDKIKQRLFENLRMLPHAPGVQMQAIPED-AVPDDNVD--------------------ED-TEDPDKR-LSIRATDK--------------RIACDEE-----FSDSEDE----------GEGGRKN-----VANHKK--------G----AKRPRV-------------------------------------------------DEDKKDGEE----------------------------------------------------------------------KKI----EIKEEENTK----------------DISAEKTDSKS------VKTEQ-------TTSA--------------------------------------------------------------------------------- [490] 'gi|87162464|ref|NP 032255.2| histone deacetylase 2 [Mus musculus]' --------------------------------------------------------------------------------------------------------------------------------MA-------------Y-S-QGGGKKKVCY----------------YYD-GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM---EMYQPSA--------VVLQCG-----ADSLSGDRLGCF--NLTVKGHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALD--CEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHEDSGD--------------------ED-GEDPDKR-ISIRASDK--------------RIACDEE-----FSDSEDE----------GEGGRRN-----VADHKK--------G----AKKARI-------------------------------------------------EEDKKETED----------------------------------------------------------------------KKT----DVKEEDKSK----------------DNSGEKTDPKG------AKSEQ-------LSNP--------------------------------------------------------------------------------- [488] 'gi|71051977|gb|AAH31055.2| HDAC2 protein [Homo sapiens]' F-----------------------------------------GGPLLASWCRCHLRFRAFGTSAGWYRAFPAPPPLLPPACPSPRDYR----PHVSLSHFLSRPSRGGSSSSSSSRRRSPVAAVAGEPMA-------------Y-S-QGGGKKKVCY----------------YYD-GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM---EMYQPSA--------VVLQCG-----ADSLSGDRLGCF--NLTVKGHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTHETAVALD--CEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHEDSGD--------------------ED-GEDPDKR-ISIRASDK--------------RIACDEE-----FSDSEDE----------GEGGRRN-----VADHKK--------G----AKKARI-------------------------------------------------EEDKKETED----------------------------------------------------------------------KKT----DVKEEDKSK----------------DNSGEKTDTKG------TKSEQ-------LSNP--------------------------------------------------------------------------------- [571] 'gi|55961192|emb|CAI15363.1| HDAC2 [Homo sapiens] >gi|55960368|emb|CAI14207.1| HDAC2 [Homo sapiens] >gi|68068066|sp|Q92769|HDAC2' --------------------------------------------------------------------------------------------------------------------------------MA-------------Y-S-QGGGKKKVCY----------------YYD-GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM---EMYQPSA--------VVLQCG-----ADSLSGDRLGCF--NLTVKGHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALD--CEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHEDSGD--------------------ED-GEDPDKR-ISIRASDK--------------RIACDEE-----FSDSEDE----------GEGGRRN-----VADHKK--------G----AKKARI-------------------------------------------------EEDKKETED----------------------------------------------------------------------KKT----DVKEEDKSK----------------DNSGEKTDTKG------TKSEQ-------LSNP--------------------------------------------------------------------------------- [488] 'gi|89268122|emb|CAJ81536.1| histone deacetylase 2 [Xenopus tropicalis]' --------------------------------------------------------------------------------------------------------------------------------MA-------------Y-T-QGGAKKKVCY----------------YYD-GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM---EMYQPSA--------VVLQCG-----ADSLSGDRLGCF--NLTVKGHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALD--CEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVQEDSGD--------------------EE-GEDPDKR-ISIRASDK--------------RIACDEE-----FSDSEDE----------GEGGRRN-----VADHKK--------G----AKKARL-------------------------------------------------EEDKKETDD----------------------------------------------------------------------KKS----DVKEEDKSK----------------DNIAEKMDTKG------VKSEQ-------PSNP--------------------------------------------------------------------------------- [488] 'gi|62666128|ref|XP 342150.2| PREDICTED: histone deacetylase 2 [Rattus norvegicus]' MVISYHKLSRNKPSSLFPDIFKSGSGDLCFPLRAAAVVPPNSQPRRPEAYPCRVSRVGAAANPALRSRALPAPARRPAPGCPCCEGRRARRLPQPSCLAAGPRRARAAGGGAAARRRRP-------EPMA-------------Y-S-QGGGKKKVCY----------------YYD-GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAVLELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM---EMYQPSA--------VVLQCG-----ADSLSGDRLGCF--NLTVKGHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALD--CEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHEDSGD--------------------ED-GEDPDKR-ISIRASDK--------------RIACDEE-----FSDSEDE----------GEGGRRN-----VADHKK--------G----AKKARI-------------------------------------------------EEDKKEAED----------------------------------------------------------------------KRT----DVKEEDKSK----------------DNSGEKTDTKG------AKSEQ-------LNNP--------------------------------------------------------------------------------- [609] 'gi|3023934|sp|P70288|HDAC2 MOUSE Histone deacetylase 2 (HD2) (YY1 transcription factor-binding protein) >gi|1667396|gb|AAC52889' --------------------------------------------------------------------------------------------------------------------------------MA-------------Y-S-QGGGKKKVCY----------------YYD-GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM---EMYQPSA--------VVLQCG-----ADSLSGDRLGCF--NLTVKGHAKCVEVAKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALD--CEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHEDSGD--------------------ED-GEDPDKR-ISIRASDK--------------RIACDEE-----FSDSEDE----------GEGGRRN-----VADHKK--------G----AKKARI-------------------------------------------------EEDKKETED----------------------------------------------------------------------KKT----DVKEEDKSK----------------DNSGEKTDPKG------AKSEQ-------LSNP--------------------------------------------------------------------------------- [488] 'gi|49257716|gb|AAH74509.1| Histone deacetylase 1 [Xenopus tropicalis] >gi|53749670|ref|NP 001005432.1| histone deacetylase 1 [X' --------------------------------------------------------------------------------------------------------------------------------MA-------------Y-T-QGGAKKKVCY----------------YYD-GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM---EMYQPSA--------VVLQCG-----ADSLSGDRLGCF--NLTVKGHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALD--CEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVQEDSGD--------------------EE-GEDPDKR-ISIRASDK--------------RIACDEE-----FSDSEDE----------GEGGRRN-----VADHKK--------G----AKKARL-------------------------------------------------EEEKKETDD----------------------------------------------------------------------KKS----DVKEEDKSK----------------DNIAEKMDTKG------VKSEQ-------PSNP--------------------------------------------------------------------------------- [488] 'gi|60654411|gb|AAX29896.1| histone deacetylase 2 [synthetic construct]' --------------------------------------------------------------------------------------------------------------------------------MA-------------Y-S-QGGGKKKVCY----------------YYD-GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM---EMYQPSA--------VVLQCG-----ADSLSGDRLGCF--NLTVKGHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTHETAVALD--CEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHEDSGD--------------------ED-GEDPDKR-ISIRASDK--------------RIACDEE-----FSDSEDE----------GEGGRRN-----VADHKK--------G----AKKARI-------------------------------------------------EEDKKETED----------------------------------------------------------------------KKT----DVKEEDKSK----------------DNSGEKTDTKG------TKSEQ-------LSNPL-------------------------------------------------------------------------------- [489] 'gi|51703484|gb|AAH81054.1| Hdac2 protein [Xenopus laevis]' --------------------------------------------------------------------------------------------------------------------------------MA-------------Y-T-QGGAKKKVCY----------------YYD-GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM---EMYQPSA--------VVLQCG-----ADSLSGDRLGCF--NLTVKGHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALD--CEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVQEDSGD--------------------EE-GEDPDKR-ISIRASDK--------------RIACDEE-----FSDSEDE----------GEGGRRN-----VADHKK--------G----AKKARL-------------------------------------------------EEDKKETDD----------------------------------------------------------------------KKS----DVKEEDKSK----------------DNIAEKMDTKG------VKSEQ-------PINP--------------------------------------------------------------------------------- [488] 'gi|62655265|ref|XP 576595.1| PREDICTED: histone deacetylase 1 [Rattus norvegicus]' --------------------------------------------------------------------------------------------------------------------------------MA-------------Q---TQGTERKVCY----------------YYD-GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHYAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHHGDGDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMSKVM---EMFQPSA--------VVLQCG-----SDSLSGDRLGCF--NLTIKGHAKCVEFVKSFNLPMLM-LGGDGYTIHNVARCWTYETAVALD--TEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTNEYLEKIKQRLFENLRMLPHTPGVQMQAIPED-AIPEESGD--------------------ED-EEDPDKP-ISICSSDK--------------CIACEEE-----FPDSDEE----------GEGGREN-----SSNFKK-------------AKRVKT-------------------------------------------------EDEKEKDPE----------------------------------------------------------------------EKK----EVTEEEKTK-------------------EEKPEAKG------VKEEV-------KMA---------------------------------------------------------------------------------- [484] 'gi|32450592|gb|AAH54208.1| Hdac2 protein [Xenopus laevis]' --------------------------------------------------------------------------------------------------------------------------------MA-------------Y-T-QGGAKKKVCY----------------YYD-GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM---EMYQPSA--------VVLQCG-----PDSLSGDRLGCF--NLTVKGHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALD--CEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVQEDSGD--------------------EE-GEDPDKR-ISIRASDK--------------RIACDEE-----FSDSEDE----------GEGGRRN-----VADHKK--------K----KKKKKK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [447] 'gi|4557641|ref|NP 001518.1| histone deacetylase 2 [Homo sapiens] >gi|1667394|gb|AAC50814.1| transcriptional regulator homolog R' --------------------------------------------------------------------------------------------------------------------------------MA-------------Y-S-QGGGKKKVCY----------------YYD-GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE--YSKQMHIFNVGE--DCPAFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKYEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMCDGIDDESYGQIFKP-IISKVM---EMYQPSA--------VVLQCG-----ADSLSGDRLGCF--NLTVKGHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALD--CEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHEDSGD--------------------ED-GEDPDKR-ISIRASDK--------------RIACDEE-----FSDSEDE----------GEGGRRN-----VADHKK--------G----AKKARI-------------------------------------------------EEDKKETED----------------------------------------------------------------------KKT----DVKEEDKSK----------------DNSGEKTDTKG------TKSEQ-------LSNP--------------------------------------------------------------------------------- [488] 'gi|21299237|gb|EAA11382.1| ENSANGP00000004321 [Anopheles gambiae str. PEST] >gi|31217962|ref|XP 316539.1| ENSANGP00000004321 [A' --------------------------------------------------------------------------------------------------------------------------------M------------------QSHSKKRVCY----------------YYD-SDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKATADEMTKFHSDDYIRFLRSIRPDNMSE--YNKHMQRFNVGE--DCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYH------------------QRVLYIDI-------DVHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGRGKYYAVNIPLRDGMDDESYDSIFVP-IISKVM---ETFQPSA--------VVLQCG-----ADSLTGDRLGCF--NLTVKGHGKCVEFVKKYNLPFLM-VGGGGYTIRNVSRCWTYETSVALG--VEIANELPYNDYFEYFGPDFK-LHIS-PSNMSNQNTTEYLEKIKNRLFENLRMLPHAPGVQVQPIPED-AINDESED--------------------ED-KVDKDER-LPQQDKDK--------------RIVPDNE-----FSDSEDE----------GEGGRRD-----NRSFKGGQGAGQQQS----RKRPRI-------------------------------------------------EKDGKAE-------------------------------------------------------------------------------EVKDEKE------------------------------------------------------------------------------------------------------------------------------------ [466] 'gi|19070647|gb|AAL83942.1| putative histone deacetylase [Physarum polycephalum]' ---------------------------------------------------------------------------------------------------------------------------------------------------MASNKPKVAY----------------FYD-ADVGNYYYGQGHPMKPHRIRMTHNLLLNYGPY--KKMQIYRPRRATELDMTKFHSDDYIQFLRLVSPDNMNE--YAKQLQRFNVVE--DCPIFEGMFNFFQISAGGSVGGAVKLNNNDANVAMNWAGGLHQAKKSEASGFCYVNDIVLAILELLKHH------------------QRILYIDV-------DIHH--GDGVEEAFYTTDRVMTVSFHKFGD-YFPGTGDIRDVGAGKGKYYAVNFPLKDGIDDESYQSVFKP-IIQAVI---EFYRPGA--------IVFQSG-----AHSLSGDRLGGF--NLSIRGHAECLTFLKQFNLPLLV-LGGGGYTIRNVARCWAYDTGVVLD--TELDDELPYNDYLEYFGPDYR-LHYT-PNNMENQNGREYLEKCKNKILENLRHLQNAPGVAMHEVPPD-AM-DDSDD--------------------SD-DDDPDSR-QNQRDLDR--------------RVSHEDN-----LSDSDEE-DGRRNMEDEPNGGYSS-----SNSHRA-------------SRRKRTGKISIMAGDKERAPMSRNARSVIPPPHSPISTHGSTLIPPHSPVPPPVDDDDMVDAEE----------------------------------------------------------------------AEVDIQGDSGEVPFST----------------NNNNNNTNNNGNSNNNNNNNNNINTNNNDNNMTSNATTTTSTTNADNNSNNSTKS----------------------------------------------------------- [579] 'gi|3659524|gb|AAC61494.1| putative histone deacetylase [Drosophila melanogaster]' --------------------------------------------------------------------------------------------------------------------------------M------------------QSHSKKRVCY----------------YYD-SDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKATADEMTKFHSDEYVRFLRSIRPDNMSE--YNKQMQRFNVGE--DCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYH------------------QRVLYIDI-------DVHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVP-IISKVM---ETFQPAA--------VVLQCG-----ADSLTGDRLGCF--NLTVKGHGKCVEFVKKYNLPFLM-VGGGGYTIRNVSRCWTYETSVALA--VEIANELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTSEYLEKIKNRLFENLRMLPHAPGVQIQAIPED-AINDESDD--------------------ED-KVDKDDR-LPQSDKDK--------------RIVPENE-----YSDSEDE----------GEGGRRD-----NRSYKG--------Q----RKRPRL-------------------------------------------------DKDTNSNKA-----------------------------------------------------------------------SSETSSEIKDEKEKG----------------DGADGEESTASNTNSNNNSNNKSDNDAGATANAGSGSGTGSGAGAKGAKENNI------------------------------------------------------------- [521] 'gi|24657891|ref|NP 647918.2| Rpd3 CG7471-PA [Drosophila melanogaster] >gi|16197909|gb|AAL13716.1| GM14158p [Drosophila melanoga' --------------------------------------------------------------------------------------------------------------------------------M------------------QSHSKKRVCY----------------YYD-SDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKATADEMTKFHSDEYVRFLRSIRPDNMSE--YNKQMQRFNVGE--DCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYH------------------QRVLYIDI-------DVHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVP-IISKVM---ETFQPAA--------VVLQCG-----ADSLTGDRLGCF--NLTVKGHGKCVEFVKKYNLPFLM-VGGGGYTIRNVSRCWTYETSVALA--VEIANELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTSEYLEKIKNRLFENLRMLPHAPGVQIQAIPED-AINDESDD--------------------ED-KVDKDDR-LPQSDKDK--------------RIVPENE-----YSDSEDE----------GEGGRRD-----NRSYKG--------Q----RKRPRL-------------------------------------------------DKDTNSNKA-----------------------------------------------------------------------SSETSSEIKDEKEKG----------------DGADGEESTASNTNSNNNSNNKSDNDAGATANAGSGSGSGSGAGAKGAKENNI------------------------------------------------------------- [521] 'gi|66828287|ref|XP 647498.1| hypothetical protein DDB0189724 [Dictyostelium discoideum] >gi|60475530|gb|EAL73465.1| hypothetica' --------------------------------------------------------------------------------------------------------------------------------M---------------------STRKVSY----------------FYD-NEVGNHYYGPNHPMKPHRMRMTHDLVLNYGIY--KKMQIFRPRKASELELTNFHSDDYINFLKLVTPDNMHD--YSKQLVKFNVRE--DCPVFDGMYNFCQISSGGSIGCAVKVNSKESDVAINWAGGLHHAKKSEASGFCYTNDIVLSILELLKHH------------------ERVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGD-YFPGTGDVKDIGADKGKYYSLNFPLKDGIDDESYQSIFRP-IIRSVM---DFYRPGA--------VVIQCG-----ADSLTGDRLGCF--NLTLRGHAQCIEFLKSFNVPLVV-LGGGGYTIKNVARCWTYETSILVD--SELKDELPYNDYLEYYGPEYR-LHIT-PNNMENQNTKDYLEKLKIQLLENLRNLNHAPAAAHHDIPPD-SFNYSDD---------------------ED-DEDPDVR-ISEADRDK--------------KVHHQGE-----LSDSDEE-DGRRNYSNGLEATSTSRRNQVSISAYD-------------KERPSY----------------------------------------------------------------------------------------------------------------------------------------------------------------NSRNNNNNNNNNNNNNNNNNNNSNNNNSHHHNEDADVDMDSG------------------------------------------------------------------------ [495] 'gi|54641397|gb|EAL30147.1| GA20378-PA [Drosophila pseudoobscura]' --------------------------------------------------------------------------------------------------------------------------------M------------------QSHSKKRVCY----------------YYD-SDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKATADEMTKFHSDEYVRFLRSIRPDNMTE--YNKQMQRFNVGE--DCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYH------------------QRVLYIDI-------DVHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVP-IISKVM---ETFQPAA--------VVLQCG-----ADSLTGDRLGCF--NLTVKGHGKCVDFVKKYNLPFLM-VGGGGYTIRNVSRCWTYETSVALA--VDIANELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTSEYLEKIKNRLFENLRMLPHAPGVQIQAIPED-AINDESDD--------------------ED-KVDKDDR-LPQSDKDK--------------RIVPENA-----YSDSEDE----------GEGGRRD-----NRAYKG--------Q----RKRPRL-------------------------------------------------DKDNNSNKA-----------------------------------------------------------------------SSEVSSEIKDEKEKV----------------DGADGEESTASN------------------------------------------------------------------------------------------------------ [480] 'gi|73974025|ref|XP 532270.2| PREDICTED: similar to Histone deacetylase 2 (HD2) [Canis familiaris]' --------------------------------------------------------------------------------------------------------------------------------MP-----------------------TVKY----------------FWDASDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM---EMYQPSA--------VVLQCG-----ADSLSGDRLGCF--NLTVKGHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALD--CEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHEDSGD--------------------ED-GEDPDKR-ISIRASDK--------------RIACDEE-----FSDSEDE----------GEGGRRN-----VADHKK--------G----AKKARI-------------------------------------------------EEDKKETED----------------------------------------------------------------------KKA----DVKEEDKSK----------------DSSGEKTDTKG------AKSEQ-------LSNP--------------------------------------------------------------------------------- [481] 'gi|72026657|ref|XP 798972.1| PREDICTED: similar to histone deacetylase 1 [Strongylocentrotus purpuratus]' ----------------------------------------------------------------------------------------------------------------------------------------------------------MFF----------------NFS-GDVGNYYYGQGHPMKPHRIRMTHNLILNYGLY--RKMEIYRPHKAVMEEMTKYHSDDYVKFLRTIRPDNMSE--YTKQMQRFNVGE--DCPVFDGLYEFCQLSSGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYDKIFKP-IMCKVM---EMYQPSA--------ICLQCG-----ADSLSGDRLGCF--NLTLKGHAKCVEFMKQYNLPLLL-MGGGGYTIRNVARCWTYETSTALG--VEIANELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTGEYLDKIKTRLYENMRMIPHAPGVQMQPIPED-AIPDDSDA--------------------EDEAENPDKR-ISIMAQDK--------------RIQRDDE-----FSDSEDE-GETRL---PGEGGRRD-----HRSHK--------------AKRSKI-------------------------------------------------DDSPGKEAD----------------------------------------------------------------------KGE----QICSV-------------------------------------------------------------------------------------------------------------------------------------- [458] 'gi|45382275|ref|NP 990162.1| histone deacetylase 2 [Gallus gallus] >gi|2791686|gb|AAB96924.1| histone deacetylase-2; HD-2 [Gall' --------------------------------------------------------------------------------------------------------------------------------MA-------------Y-S-QGGGKKKVCY----------------YYD-GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSEVSMVN-NFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM---EMYQPSA--------VVLQCG-----ADSLSGDRLGCF--NLTVKGHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALD--CEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHEDSGD--------------------ED-GEDPDKR-ISIRASDK--------------RIACDEE-----FSDSEDE----------GEGGRRN-----VADHKK--------G----AKKARI-------------------------------------------------EEDKKETED----------------------------------------------------------------------KKA----DVKEEDKSK----------------DNSGEKTDTKG------AKSEQ-------LSNP--------------------------------------------------------------------------------- [488] 'gi|1666637|emb|CAA70455.1| histone deacetylase [Drosophila melanogaster]' --------------------------------------------------------------------------------------------------------------------------------M------------------QSHSKKRVCY----------------YYD-SDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMDI-RPHKATADEMTKFHCDEYVRFLRSIRPDNMSE--YNKQMQRFNVGE--DCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYH------------------QRVLYIDI-------DVHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVP-IISKVM---ETFQPAA--------VVLQCG-----ADSLTGDRLGCF--NLTVKGHGKCVEFVKKYNLPFLM-VGGGGYTIRKVSRCWTYETSVALA--VEIANELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTSEYLEKIKNRLFENLRMLPHAPGVQIQAIPED-AINDESDD--------------------ED-KVDKDDR-LPQSDKDK--------------RIVPENE-----YSDSEDE----------GEGGRRD-----NRSYKG--------Q----RKRPRL-------------------------------------------------DKDTNSNKA-----------------------------------------------------------------------SSETSSEIKDEKEKG----------------DGADGEESTASNTNSNNNSNNKSDNDAGATANAGSGSGSGSGAGAKGAKENNI------------------------------------------------------------- [520] 'gi|2583090|gb|AAC23917.1| putative histone deacetylase HDAC1 [Drosophila melanogaster]' --------------------------------------------------------------------------------------------------------------------------------M------------------QSHSKKRVCY----------------YYD-SDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKATADEMTKFHSDEYVRFLRSIRPDNMSE--YNKQMQRFNVGE--NCPVFDGLYDFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYH------------------QRVLYIDI-------DVHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVP-IISKVM---ETFQPAA--------VVLQCG-----ADSLTGDRLGCF--NLTVKGHGKCVEFVKKYNLPFLMVVGGGGYTIRKVSRCWTYETSVALA--VEIANELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTSEYLEKIKNRLFENLRMVPHAPGVQIQAIPED-AINDESDD--------------------ED-KVDKDDR-LPQSDKDK--------------RIVPENE-----YSDSEDE----------GEGGRRD-----NRSYKG--------Q----RKRPRL-------------------------------------------------DKDTNSNKA-----------------------------------------------------------------------SSETSSEIKDEKEKG----------------DGADGEESTASNTNSNNNSNNKSDNDAGATANAGSGSGTGSGAGAKGAKENNI------------------------------------------------------------- [522] 'gi|40555832|gb|AAH64650.1| Hdac1 protein [Danio rerio]' --------------------------------------------------------------------------------------------------------------------------------MA-------------L-S-SQGTKKKVCY----------------YYD-GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-IMSKVM---EMYQPSA--------VVLQCG-----ADSLSGDRLGCF--NLTIKGHAKCVEYMKSFNLPLLM-LGGGGYTIRNVARCWTFETAVALD--STIPNELPYNDYFEYFGPDFK-LHIS-PSNMTN---------------------------QMQAIPED-AVQEDSGD--------------------EE--DDPDKR-ISIRAHDK--------------RIACDEE-----FSDSEDE----------GQGGRRN-----AANYKK-------------PKRVKT-------------------------------------------------EEEKDG--E----------------------------------------------------------------------EKKGEPTDVKEEEKAS-------------------EEKMDTKG------PKEEL-------KTV---------------------------------------------------------------------------------- [457] 'gi|55627246|ref|XP 518700.1| PREDICTED: similar to transcriptional regulator homolog RPD3 [Pan troglodytes]' -----------------------------------MRPPPRGLRRWFGGPLLASWCRCHLRFRAFGTSAGWYRIFPAPPPLLPPACPSPRDYRPHVSLSPFLSRPSRGGSSSSSSRRRSPEAAVAGEPMA-------------Y-S-QGGGKKKVCY----------------YYD-GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYF------------------EREICRGTYEFGRSQYIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM---EMYQPSA--------VVLQCG-----ADSLSGDRLGCF--NLTVKGHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALD--CEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHEDSGD--------------------ED-GEDPDKR-ISIRASDK--------------RIACDEE-----FSDSEDE----------GEGGRRNEKPLSLKDFLK-------------EKRFFFFFGVSLLGEGVAPSSAL--------------------------------GEDVEEAADAASPSAAVAPPWRPTRRPRAKRRRLPSRRIYLSVRFGRRRGHSRLPRPLRGGFSLRCGLGELGTHAGFFNKET----QQIQEGKQRASGWCNDWASSSSGGGGNSGSGTHTGGRGVGVVERTEQNRLNTLRIKKF--------------------------------------------------------------------------------- [708] 'gi|47219554|emb|CAG09908.1| unnamed protein product [Tetraodon nigroviridis]' --------------------------------------------------------------------------------------------------------------------------------MA-------------L-T-SQGTKKKVCY----------------YYD-GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKANGEEMTKYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSVGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-ARARLLLSVTEVVPRADNGQGDGDVPAQCGGSPVRSDSLSGDRLGCF--NLTIKGHAKCVEYMKSFNLPLLM-LGGGGYTIRNVARCWTYETAVALD--ASIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTNDYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AVQEDSGD--------------------EE-EEDPNKR-ISIRAHDK--------------RIACEEE-----FSDSEDE----------GEGGRRN-----SASFKK-------------AKRAKT-------------------------------------------------EGDKEGEEK----------------------------------------------------------------------EKK----EVKEEEKVP-------------------EEE------------------------------------------------------------------------------------------------------------ [486] 'gi|66515540|ref|XP 394976.2| PREDICTED: similar to ENSANGP00000004321 [Apis mellifera]' --------------------------------------------------------------------------------------------------------------------------------MS---------------ALPHISRENILHVQRDCQNVFVISALNIYIL-GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKATADEMTKFHSDDYIRFLRSIRPDNMSE--YNKQMQRFNVGE--DCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYH------------------QRVLYIDI-------DVHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESIFVP-IISKVM---ETFQPSA--------VVLQCG-----ADSLTGDRLGCF--NLTVRGHGKCVEFVKKYNLPFLM-VGGGGYTIRNVSRCWTYETSVALG--SEIANELPYNDYFEYFGPDFK-LHIS-PSNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQSIPEDGAVIEDSEA--------------------EE-KVNPDER-LPQRDLDK--------------RIQHENE-----YSDSEEE----------GEGGRRD-----NRSFKG--------S----RKRPRL-------------------------------------------------EKGQEENEK---------------------------------------------------------------------DEKT----NITNEETKK----------------DGGANP------------------------------------------------------------------------------------------------------------ [492] 'gi|55586155|ref|XP 513092.1| PREDICTED: similar to Histone deacetylase 1 (HD1) [Pan troglodytes]' --------------------------------------------------------------------------------------------------------------------------------M------------------PNCVSEAVAL----------------SSS-GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMSKVM---EMFQPSA--------VVLQCG-----SDSLSGDRLGCF--NLTIKGHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCWTYETAVALD--TEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTNEYLEKIK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [361] 'gi|17017402|gb|AAL33655.1| histone deacetylase [Zea mays]' --------------------------------------------------------------------------------------------------------------------------------ML--------------------EKDRISY----------------FYD-GDVGNVYFGPNHPMKPHRLCMTHHLVLSYGLH--QKMEIYRPHKAYPIELAQFHSADYVEFLHRITPDSQHL--YASELTRYNLGE--DCPVFDNLFEFCQIYAGGTLDAARRLNHKICDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH------------------ARVLYIDI-------DVHH--GDGVEEAFYFTDRVMTVSFHKYGDLFFPGTGDIKDIGEREGKYYAINIPLKDGIDDTSFTRLFKT-IIAKVV---ETYLPGA--------IVLQCG-----ADSLARDRLGCF--NLSIEGHAECVKFVKKFNIPLLV-TGGGGYTKENVARCWAVETGVLLD--TELPNEIPKNEYIEYFAPDYT-LKVP-NLNMDNLNSKTYLSSIKVQVMESLRYIQHAPGVQMQEVPPD-FYIPDFD---------------------ED-ELDPDER-VDQHTQDK--------------QIHRDDE-----YYEGDND-NDHDDGTR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [430] 'gi|76668103|ref|XP 869380.1| PREDICTED: similar to Histone deacetylase 2 (HD2) isoform 2 [Bos taurus]' --------------------------------------------------------------------------------------------------------------------------------MA-------------Y-S-QGGGKKKVCY----------------YYD-GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPGIFKKKL---SLDDEAS--------LVAQCG-----GDGIPRRRIDAF--ELSVLGHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALD--CEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHEDSGD--------------------ED-GEDPDKR-ISIRASDK--------------RIACDEE-----FSDSEDE----------GEGGRRN-----VTDHKK--------G----AKKARI-------------------------------------------------EEDKKETED----------------------------------------------------------------------KKA----DVKEEDKSK----------------DNSGEKTDTKG------AKSEQ-------LSNP--------------------------------------------------------------------------------- [489] gnl|CMER|CMJ129C_histone_deacetylase --------------------------------------------------------------------------------------------------------------------------------MK-----AEAGTSESRVGTLEAFPSRVAY----------------FYD-HDVGNYYYALGHPMKPHRMRMVHELLIAYGVH--EKLQVLQPPRATERDLTRFHSDEYIEFLRRITPETAQK--QLDQLQRFGLFE--DSPCFDDIYRFCQISAGGSLAGAARLNRGFCDVAINWSGGLHHAKKSEASGFCYVNDCVLAILELLKHH------------------ARVLYCDI-------DVHH--GDGVEEAFYTTNRVMTCSFHKFGN-FFPGTGDVRDIGYGPGRHYALNFPLQDGIDDVCYREIFAP-IMSRVM---EWYQPTA--------VVLQCG-----ADSLSGDRLGCF--NLSLDGHAQCVRFFQRYGVQLML-LGGGGYTIRNVARCWAYETALAAG--VVLDDMIPYNPYYEYYGPDFR-LRIR-PSNMENLNTPSYLHRMMVQLLESLRSLPHTPSVPFHSVPAD-VISDPLLRKFSA---------------------------PVPLSDDE--------------HSVCSSD-----WDD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [428] 'gi|17561978|ref|NP 506599.1| Histone DeAcetylase family member (hda-1) [Caenorhabditis elegans] >gi|3023926|sp|O17695|HDA1 CAEE' --------------------------------------------------------------------------------------------------------------------------------MN------------SNGPLMEHGKRRVAY----------------YYD-SNIGNYYYGQGHVMKPHRIRMTHHLVLNYGLY--RNLEIFRPFPASFEDMTRFHSDEYMTFLKSANPDNLKS--FNKQMLKFNVGE--DCPLFDGLYEFCQLSSGGSLAAATKLNKQKVDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYH------------------KRVLYVDI-------DVHH--GDGVEEAFYTTDRVMTVSFHKYGD-FFPGTGDLKDIGAGKGKLYSVNVPLRDGITDVSYQSIFKP-IMTKVM---ERFDPCA--------VVLQCG-----ADSLNGDRLGPF--NLTLKGHGECARFFRSYNVPLMM-VGGGGYTPRNVARCWTYETSIAVD--KEVPNELPYNDYFEYFGPNYR-LHIE-SSNAANENSSDMLAKLQTDVIANLEQLTFVPSVQMRPIPED-ALSALNDDSLI-----------------AD-QANPDKR-LPPQITDG--------------MIQDDGD-----FYDGEREGDDRRNESDAKRAAQFESEGGEKRQKTE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [461] 'gi|47214117|emb|CAG00682.1| unnamed protein product [Tetraodon nigroviridis]' ------------------------------------------------------------------------------------------------------------------------------------------------------MTNRTSY----------------FYD-PDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLY--KKMMVFKPYKASQHDMCRFHSEDYIDFLQKVSPNNMQG--FTKSLNTFNVGD--DCPVFPGLFEFCSRYTGASLQGATQLNHKICDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYH------------------PRVLYIDI-------DIHH--GDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQP-VIKQVV---DFYQPTC--------IVLQCG-----ADSLGCDRLGCF--NLSIRGHGECVEFVKSFKIPLLV-LGGGGYTVRNVARCWTFETSLLLE--ESISDELPYSEYFEYFAPDFT-LHPDVSTRIENQNSRQYLEQIRQTVFENLKMLNHAPSVQIHDVPSD-MLNYERND-----------------------EPDPDER-GAEENYTR---------------PEAANE-----FYDGDHD-NDKESDVEI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [428] 'gi|76668101|ref|XP 877730.1| PREDICTED: similar to Histone deacetylase 2 (HD2) isoform 6 [Bos taurus]' --------------------------------------------------------------------------------------------------------------------------------MA-------------Y-S-QGGGKKKVCY----------------YYD-GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-VISSVI---EGFYPNK---------LWKIL-----KEMGIADHLTCLLRNLSVLGHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALD--CEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHEDSGD--------------------ED-GEDPDKR-ISIRASDK--------------RIACDEE-----FSDSEDE----------GEGGRRN-----VTDHKK--------G----AKKARI-------------------------------------------------EEDKKETED----------------------------------------------------------------------KKA----DVKEEDKSK----------------DNSGEKTDTKG------AKSEQ-------LSNP--------------------------------------------------------------------------------- [489] 'gi|39589878|emb|CAE60876.1| Hypothetical protein CBG04588 [Caenorhabditis briggsae]' --------------------------------------------------------------------------------------------------------------------------------MN------------SNGPLQEHGKRRVAY----------------YYD-SNIGNYYYGQGHVMKPHRIRMTHHLVLNYGLY--RSMEIFRPFPATFDDMTRFHSEEYMLFLKSANPDNLKS--FNKQMLKFNVGE--DCPLFDGLYEFCQLSSGGSLAAATKLNKQKVDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYH------------------KRVLYVDI-------DVHH--GDGVEEAFYTTDRVMTVSFHKYGD-FFPGTGDLKDIGAGKGKLYSVNVPLRDGITDSSYQSIFKP-IMTKVM---ERFDPSA--------VVLQCG-----ADSLNGDRLGPF--NLTLKGHGECARFFRSYNVPLMM-VGGGGYTPRNVARCWTYETSIAVD--REVANELPYNDYFEYFGPNYR-LHIE-QSNANNENNPELLTKLQADVIANLEKLTFVPSVQMRPIEDD-ALRSMNDSSAL-----------------VD-MADPDRR-LPAEVTDQ--------------MIQDEGD-----FYDGEREGDDRRNESDGKRAAQLDSEGGK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [455] 'gi|27882115|gb|AAH44543.1| Similar to histone deacetylase 3 [Danio rerio] >gi|41055869|ref|NP 957284.1| histone deacetylase 3 [' ------------------------------------------------------------------------------------------------------------------------------------------------------MTNRTAY----------------FYD-PDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLY--KKMMVFKPYKASQHDMCRFHSEDYIDFLQKVSPNNMQG--FTKSLNTFNVGG--DCPVFPGLFEFCSRYTGASLQGATQLNHKICDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYH------------------PRVLYIDI-------DIHH--GDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQP-VIKQVV---DFYQPTC--------IVLQCG-----ADSLGCDRLGCF--NLSIRGHGECVEFVKGFKIPLLV-LGGGGYTVRNVARCWTFETSLLVE--ESISDELPYSEYFEYFAPDFT-LHPDVSTRIENQNSRQYLEQIRQTVFENLKMLNHAPSVQIRDVPSD-LLSYERPD-----------------------EADPEER-GSEENFSR---------------PEAANE-----FYDGDHD-HDKESDVEI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [428] 'gi|45382059|ref|NP 990078.1| histone deacetylase 3 [Gallus gallus] >gi|2791688|gb|AAB96925.1| histone deacetylase-3; HD-3 [Gall' ------------------------------------------------------------------------------------------------------------------------------------------------------MAKTVAY----------------FYD-PDVGNFHYGAGHPMKPHRLALTHSLVLHYGLY--KKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPNNMQG--FTKSLNAFNVGD--DCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYH------------------PRVLYIDI-------DIHH--GDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYALNVPLRDGIDDQSYKHLFQP-VINQVV---DYYQPTC--------IVLQCG-----ADSLGRDRLGCF--NLSIRGHGECVEYVKSFNIPLLV-LGGGGYTVRNVARCWTYETSLLVD--EAISEELPYSEYFEYFAPDFT-LHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPSD-LLSYDRTD-----------------------EPDPEER-GSEENYSR---------------PEAANE-----FYDGDHD-NDKESDVEI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [428] 'gi|12963264|gb|AAK11184.1| histone deacetylase 3 [Rattus norvegicus] >gi|16758192|ref|NP 445900.1| histone deacetylase 3 [Rattu' ------------------------------------------------------------------------------------------------------------------------------------------------------MAKTVAY----------------FYD-PDVGNFHYGAGHPMKPHRLALTHSLVLHYGLY--KKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQG--FTKSLNAFNVGD--DCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYH------------------PRVLYIDI-------DIHH--GDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQP-VISQVV---DFYQP?C--------IVLQCG-----ADSLGCDRLGCF--NLSIRGHGECVEYVKSFNIPLLV-LGGGGYTVRNVARCWTYETSLLVE--EAISEELPYSEYFEYFAPDFT-LHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPAD-LLTYDRTD-----------------------EADAEER-GPEENYSR---------------PEAPNE-----FYDGDHD-NDKESDVEI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [428] 'gi|76623288|ref|XP 873571.1| PREDICTED: similar to histone deacetylase 3 isoform 2 [Bos taurus] >gi|12653663|gb|AAH00614.1| His' ------------------------------------------------------------------------------------------------------------------------------------------------------MAKTVAY----------------FYD-PDVGNFHYGAGHPMKPHRLALTHSLVLHYGLY--KKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQG--FTKSLNAFNVGD--DCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYH------------------PRVLYIDI-------DIHH--GDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQP-VINQVV---DFYQPTC--------IVLQCG-----ADSLGCDRLGCF--NLSIRGHGECVEYVKSFNIPLLV-LGGGGYTVRNVARCWTYETSLLVE--EAISEELPYSEYFEYFAPDFT-LHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPAD-LLTYDRTD-----------------------EADAEER-GPEENYSR---------------PEAPNE-----FYDGDHD-NDKESDVEI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [428] 'gi|3676558|gb|AAC67258.1| histone deacetylase 3 [Mus musculus] >gi|3639054|gb|AAC36305.1| histone deacetylase 3 [Mus musculus]' ------------------------------------------------------------------------------------------------------------------------------------------------------MAKTVAY----------------FYD-PDVGNFHYGAGHPMKPHRLALTHSLVLHYGLY--KKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQG--FTKSLNAFNVGD--DCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYH------------------PRVLYIDI-------DIHH--GDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQP-VISQVV---DFYQPTC--------IVLQCG-----ADSLGCDRLGCF--NLSIRGHGECVEYVKSFNIPLLV-LGGGGYTVRNVARCWTYETSLLVE--EAISEELPYSEYFEYFAPDFT-LHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPAD-LLTYDRTD-----------------------EADAEER-GPEENYSR---------------PEAPNE-----FYDGDHD-NDKES--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [424] 'gi|38541400|gb|AAH61988.1| Hdac3 protein [Rattus norvegicus] >gi|89257352|ref|NP 034541.2| histone deacetylase 3 [Mus musculus]' ------------------------------------------------------------------------------------------------------------------------------------------------------MAKTVAY----------------FYD-PDVGNFHYGAGHPMKPHRLALTHSLVLHYGLY--KKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQG--FTKSLNAFNVGD--DCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYH------------------PRVLYIDI-------DIHH--GDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQP-VISQVV---DFYQPTC--------IVLQCG-----ADSLGCDRLGCF--NLSIRGHGECVEYVKSFNIPLLV-LGGGGYTVRNVARCWTYETSLLVE--EAISEELPYSEYFEYFAPDFT-LHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPAD-LLTYDRTD-----------------------EADAEER-GPEENYSR---------------PEAPNE-----FYDGDHD-NDKESDVEI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [428] 'gi|62859851|ref|NP 001016883.1| histone deacetylase 3 [Xenopus tropicalis] >gi|89272754|emb|CAJ81493.1| histone deacetylase 3 [' ------------------------------------------------------------------------------------------------------------------------------------------------------MAKTVAY----------------FYD-PDVGNFHYGTGHPMKPHRLSLTHSLVLHYGLY--KKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPNNMQG--FTKSLNAFNVGD--DCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYH------------------PRVLYVDI-------DIHH--GDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRHLFQP-VIKQVI---DFYQPTC--------IVLQCG-----ADSLGCDRLGCF--NLSIRGHGECVQYVKSFNIPLLV-LGGGGYTVRNVARCWTYETSLLVD--ETISEELPYSEYFEYFAPDFT-LHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPSD-ILSYERTD-----------------------EPDPEER-GSEDNYSR---------------PEASNE-----FYDGDHD-NDKESDVEI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [428] 'gi|66735114|gb|AAY53803.1| histone deacetylase 3 [Toxoplasma gondii]' --------------------------------------------------------------------------------------------------------------------------------MA-----------------LSALRKRVAY----------------FYD-PDIGSYYYGPGHPMKPQRIRMAHALVLSYDLY--KHMEVYRPHKSIEPELCLFHSSDYISFLSSVSPENYKE--FSLQLKNFNVGEATDCPVFDGLFTFQQACAGASIDAAKKLNHHQADICVNWSGGLHHAKRSEASGFCYINDIVLGILELLKYH------------------ARVMYIDI-------DIHH--GDGVEEAFYVSHRVMTVSFHKFGD-FFPGTGDVTDVGASQGKYYAVNVPLNDGMDDDSFVALFKP-VITKCV---DVYRPGA--------IVLQCG-----ADSLTGDRLGKF--NLTIKGHAACVAFVKSLDIPLLV-LGGGGYTIRNVARCWAYETGVVLDRHREMSPHVPLNDYYDYYAPDFQ-LHLT-PSSIPNSNSPEHLEKIKTRVLSNLSYLEHAPGVQFAYVPPD-FFGEDNDD--------------------ED--EFMQNQ-VDNEGGGRAAGATAHTAANAPYRIRRKDY-----ANDFEDM-ADRDQKVPI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [451] 'gi|76668097|ref|XP 588868.2| PREDICTED: similar to Histone deacetylase 2 (HD2) isoform 1 [Bos taurus]' --------------------------------------------------------------------------------------------------------------------------------MA-------------Y-S-QGGGKKKVCY----------------YYD-GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE--YSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH------------------QRVLYIDI-------DIHH--GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-VI-------ELFQ------------ILKDD-----AVKAERRRIDAF--ELSVLGHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALD--CEIPNELPYNDYFEYFGPDFK-LHIS-PSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHEDSGD--------------------ED-GEDPDKR-ISIRASDK--------------RIACDEE-----FSDSEDE----------GEGGRRN-----VTDHKK--------G----AKKARI-------------------------------------------------EEDKKETED----------------------------------------------------------------------KKA----DVKEEDKSK----------------DNSGEKTDTKG------AKSEQ-------LSNP--------------------------------------------------------------------------------- [480] 'gi|49524335|emb|CAG57932.1| unnamed protein product [Candida glabrata CBS138] >gi|50285207|ref|XP 445032.1| unnamed protein pro' --------------------------------------------------------------------------------------------------------------------------------MV-----YESKPFDPITV-KPNDKKRVAY----------------FYD-ADVGNYAYGAGHPMKPHRIRMTHSLIMNYGLY--KKMEIYRAKPATKQEMCQFHTDEYIDFLSRVTPDNLEM--FKKESVKFNVGD--DCPVFDGLYEYCSISGGGSMEGAARLNRGKCDVAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYH------------------PRVLYIDI-------DVHH--GDGVEEAFYTTDRVMTCSFHKYGE-FFPGTGELRDIGVGKGKYYAVNVPLRDGIDDATYRSVFEP-VIGKIM---EWYQPSA--------VVLQCG-----GDSLSGDRLGCF--NLSMEGHANCVNYVKSFGIPMMV-VGGGGYTMRNVARTWCFETGLLNN--VVLDQELPYNEYYEYYGPDYK-LDVR-PSNMYNVNTPEYLDKILLGIFQNLENTKYAPSVQLNNVPND-PEDKGDEE--------------------EDTNEAKDTKGGSQYARDN--------------MVQNDTE-----FY-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [433] 'gi|55728482|emb|CAH90984.1| hypothetical protein [Pongo pygmaeus]' ------------------------------------------------------------------------------------------------------------------------------------------------------MAKTVAY----------------FYD-PDVGNFHYGAGHPMKPHRLALTHSLVLHYGLY--KKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQG--FTKSLNAFNVGD--DCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYH------------------PRVLYIDI-------DIHH--GDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQP-VINQVV---DFYQPTC--------IVLQCG-----ADSLGCDRLGCF--NLSIRGHGECVEYVKSFNIPLLV-LGGGGYTVRNVARCWTYETSLLVE--EAISEELPYSEYFEYFAPDFT-LHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIRDVPAG-LLTYDRTD-----------------------EADAEER-GPEENYSR---------------PEAPNE-----FYDGDHD-NDKESDVEI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [428] 'gi|2326173|gb|AAC52038.1| histone deacetylase 3 [Homo sapiens]' ------------------------------------------------------------------------------------------------------------------------------------------------------MAKTVAY----------------FYD-PDVGNFHYGAGHPMKPHRLALTHSLVLHYGLY--KKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQG--FTKSLNAFNVGD--DCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYH------------------PRVLYIDI-------DIHH--GDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQP-VINQVV---DFYQPTC--------IVLQCG-----ADSLGCDRLGCF--NLSIRGHGECVEYVKSFNIPLLV-LGGGGYTVRNVARCWTYETSLLVE--EAISEELPYSEYFEYFAPDFT-LHPDVSTRIENQNSRQYLDQILQTIFENLKMLNHAPSVQIHDVPAD-LLTYDRTD-----------------------EADAEER-GPEENYSR---------------PEAPNE-----FYDGDHD-NDKESDVEI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [428] 'gi|30692236|ref|NP 190054.2| HDA9; histone deacetylase [Arabidopsis thaliana] >gi|30387509|gb|AAP31920.1| At3g44680 [Arabidopsi' --------------------------------------------------------------------------------------------------------------------------------MR--------------------SKDKISY----------------FYD-GDVGSVYFGPNHPMKPHRLCMTHHLILAYGLH--SKMEVYRPHKAYPIEMAQFHSPDYVEFLQRINPENQNL--FPNEMARYNLGE--DCPVFEDLFEFCQLYAGGTIDAARRLNNKLCDIAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHH------------------PRVLYIDI-------DVHH--GDGVEEAFYFTDRVMTVSFHKFGDKFFPGTGDVKEIGEREGKFYAINVPLKDGIDDSSFNRLFRT-IISKVV---EIYQPGA--------IVLQCG-----ADSLARDRLGCF--NLSIDGHAECVKFVKKFNLPLLV-TGGGGYTKENVARCWTVETGILLD--TELPNEIPENDYIKYFAPDFS-LKIP-GGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPD-FYIPDFD---------------------ED-EQNPDVR-ADQRSRDK--------------QIQRDDE-----YFDGDND-NDAS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [426] 'gi|7108465|gb|AAF36425.1| histone deacetylase-3 [Mus musculus]' ------------------------------------------------------------------------------------------------------------------------------------------------------MAKTVAY----------------FYD-PDVGNFHYGAGHPMKPHRLALTHSLVLHYGLY--KKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQG--FTKSLNAFNVGD--DCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILEPLKYH------------------PRVLYIDI-------DIHH--GDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQP-VISQVV---DFYQPTC--------IVLQCG-----ADSLGCDRLGCF--NLSIRGHGECVEYVKSFNIPLLV-LGGGGYTVRNVARCWTYETSLLVE--EAISEELPYSEYFEYFAPDFT-LHPDVSTRIENQNSRQYLDQICQTIFENLKMLNHAPSVQIHDVPAD-LLTYDRTD-----------------------EADGEER-GPEENYSR---------------PEAPNE-----FYDGDHD-NDKESDVEI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [428] 'gi|66514075|ref|XP 395811.2| PREDICTED: similar to ENSANGP00000012089 [Apis mellifera]' --------------------------------------------------------------------------------------------------------------------------------MS--------------------YNKKVSY----------------FYN-PDVGNFHYGPGHPMKPHRLAVIHSLVLNYGLH--KKMQIYRPYRASTHDMCRFHSDEYVEFLQRVTPQNLQG--YTKYLSHFNVGD--DCPVFEGLFDFCSMYTGASLEGATKLNNNCCDIAINWSGGLHHAKKFEASGFCYINDIVIAILELLKYH------------------ARVLYIDI-------DVHH--GDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDTSYVQVFKP-VISHVM---EFFQPTA--------IVLQCG-----ADSLANDRLGCF--SLSTKGHGECVKFVRDLNVPLLT-VGGGGYTLRNVARCWTYETSLLVD--EQISNELPYTEYLEYFAPDFT-LHPDVVTRQDNANSKQYLEAITRHVYDNLKMIQHSPSVQMQDVPCD-ALSPEEER--------------------QP-EPDLDSR-QNVQDTDK--------------IIEPANE-----YYSGEKD-QDKMDVSET----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [433] 'gi|47682973|gb|AAH70873.1| LOC432017 protein [Xenopus laevis]' -------------------------------------------------------------------------------------------------------------------------------------SAGASTCRSIRPVCGSEMAKTVAY----------------FYD-PDVGNFHYGTGHPMKPHRLSLTHSLVLHYGLY--KKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPNNMQG--FTKSLNAFNVGD--DCPVFPGLFEFCSRYTGASLQGATLLNNKNCDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYH------------------PRVLYIDI-------DIHH--GDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRHLFQP-VIKQVI---DFYQPTC--------IVLQCG-----ADSLGCDRLGCF--NLSIRGHGECVQYVKSFNIPLLV-LGGGGYTVRNVARCWTYETSLLVD--ETISEELPYSEYFEYFAPDFT-LHPDVSTRIENQNSRQYLDQIRQTVFESLKMLNHAPSVQIHDVPSD-ILNYERTD-----------------------EPDPEER-GGEDNYSR---------------PEASNE-----FYDGDHD-NDKESDVEI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [445] 'gi|14333978|gb|AAK58884.1| reduced potassium dependency 3 Rpd3p [Kluyveromyces lactis]' --------------------------------------------------------------------------------------------------------------------------------MV-----YEAKPFDPITV-KANEKKRVAY----------------FYD-ADVGNYAYGAGHPMKPHRIRMTHSLIMNYGLY--KKMEIYRAKPATKQEMCQFHTDEYIDFLSRVTPDNLDM--FQKESVKFNVGD--DCPVFDGLYEYCSISGGGSMEGAARLNRGKCDVAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYH------------------PRVLYIDI-------DVHH--GDGVEEAFYTTDRVMTCSFHKYGE-FFPGTGELRDTGVGKGKYYAVNVPLRDGIDDATYKSVFEP-VIGKIM---EWYQPSA--------VVLQCG-----GDSLSGDRLGCF--NLSMKGHANCVNYMKSFGVPLMI-VGGGGYTMRNVARTWAFETGILNN--VILDEELPYNDYYEYYGPDYK-LDVR-PSNMYNVNTPEYLDKVLLNIFSNLKHTKYAPSVQLNHVPRD-AEDKGDAE--------------------EDTAAAKDTRGGSQYARDI--------------TIENATE-----F--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [432] 'gi|50308073|ref|XP 454037.1| unnamed protein product [Kluyveromyces lactis] >gi|49643172|emb|CAG99124.1| unnamed protein produc' --------------------------------------------------------------------------------------------------------------------------------MV-----YEAKPFDPITV-KANEKKRVAY----------------FYD-ADVGNYAYGAGHPMKPHRIRMTHSLIMNYGLY--KKMEIYRAKPATKQEMCQFHTDEYIDFLSRVTPDNLDM--FQKESVKFNVGD--DCPVFDGLYEYCSISGGGSMEGAARLNRGKCDVAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYH------------------PRVLYIDI-------DVHH--GDGVEEAFYTTDRVMTCSFHKYGE-FFPGTGELRDTGVGKGKYYAVNVPLRDGIDDATYKSVFEP-VIGKIM---EWYQPSA--------VVLQCG-----GDSLSGDRLGCF--NLSMKGHANCVNYMKSFGVPLMI-VGGGGYTMRNVARTWAFETGILNN--VILDEELPYNDYYEYYGPDYK-LDVR-PSNMYNVNTPEYLDKVLLNIFSNLEHTKYAPSVQLNHVPRD-AEDKGDAE--------------------EDTAAAKDTRGGSQYARDI--------------TIENATE-----F--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [432] 'gi|6840851|gb|AAF28798.1| histone deacetylase 3 [Mus musculus]' ------------------------------------------------------------------------------------------------------------------------------------------------------MAKTVAY----------------FYD-PDVGNFHYGAGHPMKPHRLALTHSLVLHYGLY--KKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQG--FTKSLDAFNVGD--DCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWARGLHHAKKFEASGFCYVNDIVIGILELLKYH------------------PRVLYIDI-------DIHH--GDGVQEAFYLTDRVMTVSFHKYGNYFFPGAGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQP-VISQVV---DFYQPTC--------IVLQCG-----ADSLGCDRLGCF--NLSIRGHGECVEYVKSFNIPLLV-LGGGGYTVRNVARCWTYETSLLVE--EAISEELPYSEYFEYFAPDFT-LHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPAD-LLTYDRTD-----------------------EADAEER-GPEENYSR---------------PEAPNE-----FYDGDHD-NDKESDVEI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [428] ; END; BEGIN CODONS; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE=unord PolyTcount=MINSTEPS ; EXSET * UNTITLED = 1-154 158-173 177 209-212 217 248-253 264-265 295 335-352 361-367 372-373 398 439 444-467 470-474 487-488 512 520-1008; END; BEGIN MacClade; Version 4.0 87; LastModified -1034947464; FileSettings editor '0' '0' '1' '1'; Singles 100; Editor 00011001111111100100010010 '1' '8' Geneva '8' '490' '1' all; EditorPosition '68' '-5' '999' '1317'; TreeWindowPosition '46' '6' '1131' '1550'; ListWindow Characters closed Geneva '9' '50' '10' '273' '366' 000; ListWindow Taxa closed Geneva '9' '50' '10' '276' '490' 100000000; ListWindow Trees closed Geneva '9' '50' '10' '276' '490' ; ListWindow TypeSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow ExSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow CharSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow TaxSets closed 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