#NEXUS 
[MacClade 4.08 registered to Tomoaki Nishiyama, National Institute for Basic Biology]


BEGIN DATA;
	DIMENSIONS  NTAX=19 NCHAR=1055;
	FORMAT DATATYPE=PROTEIN  SYMBOLS = " 1 2 3 4"  MISSING=? GAP=- ;
MATRIX
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'gi|42562994|ref|NP 176791.2| MMD1 (MALE MEIOCYTE DEATH 1); DNA binding / protein binding / zinc ion binding [Arabidopsis thalia'    M------------------------------------------------------------------------------------------------------------------PVPIIETCRKRKRKPKVYNLQRFGEDGFPI-------------QRNGAFRDQIRVFLRDCAEI----------EDYDIRGMTVWCTLLS-------HETKSSLIPLYIVEENVKHS--SEPYCDHCRCTGWSNHFVSKRKYHFIIPIDTEWS---------------------------------------------------------------------------LPLEDDAFDSQSHVLHGLIHCNGFGHLVCVNGM--ESGS-----------------------------------KYLCGREIVDFWDRLCNSLGARMITVEDLAKKRSVELRLLYGVAYGHSWFGRWGYKFCCGSFGVTKNEYENAIEALGSLEI-DQIEFDFGELRQSKEINQVFRYYREM--SEGHLKTFRDLLRFML---IIKSHASPQKLLPVTPPLLTDSPHQKRSSRLLLKKSDVADNDKSPK----------------------------YRNYSTVAANLGSRWPVRRLIFAAEVIVESLKEMKALKQNGMTRQDVRDSARLHIGDTGLLDYVLKSMNNVVVG--DVLVRRYVDPITRILHYTIQDLDDAVKAKEPKKKEAVVLEEITPLRIL-TPLKPGADVYGDLLLLYTNVLLNYPE------------SELVRSATQAILDSKHFIKEWPIWDNN-----------DTVLQFLCRINPSLVDVRSEQTTELPPGELVTVPLQATVYDLKQAIEETFRDTYCILSNFVVTEI-------DEVEEDMSLIGSCSALTVRGHGID-------------LESKLKCQGGCDTWMVKCICRARDDDGERMISCDVCEVWQHTRCCGIDDSDTLPPLFVCSNCCEE---------FAEQQRKV----LQPKYEFPSSENVFLLESADDFFGDQRCLGMIFPEENYLL   [704]
'gi|12322609|gb|AAG51303.1| PHD-finger protein, putative [Arabidopsis thaliana]'                                    M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GFRYNGTELFAIKLG-------HETKSSLIPLYIVEENVKHS--SEPYCDHCRCTGWSNHFVSKRKYHFIIPIDTEWS---------------------------------------------------------------------------LPLEDDAFDSQSHVLHGLIHCNGFGHLVCVNGM--ESGS-----------------------------------KYLCGREIVDFWDRLCNSLGARMITVEDLAKKRSVELRLLYGVAYGHSWFGRWGYKFCCGSFGVTKNEYENAIEALGSLEI-DQIEFDFGELRQSKEINQVFRYYREM--SEGHLKTFRDLLRFML---IIKSHASPQKLLPVTPPLLTDSPHQKRSSRLLLKKSDVADNDKSPK----------------------------YRNYSTVAANLGSRWPVRRLIFAAEVIVESLKEMKALKQNGMTRQDVRDSARLHIGDTGLLDYVLKSMNNVVVG--DVLVRRYVDPITRILHYTIQDLDDAVKAKEPKKKEAVVLEEITPLRIL-TPLKPGADVYGDLLLLYTNVLLNYPE------------SELVRSATQAILDSKHFIKEWPIWDNN-----------DTVLQFLCRINPSLVDVRSEQTTELPPGELVTVPLQATVYDLKQAIEETFRDTYCILSNFVVTEI-------DEVEEDMSLIGSCSALTVRGHGID-------------LESKLKCQGGCDTWMVKCICRARDDDGERMISCDVCEVWQHTRCCGIDDSDTLPPLFVCSNCCEE---------FAEQQRKV----LQPKYEFPSSENVFLLESADDFFGDQRCLGMIFPEENYLL   [653]
'gi|15226359|ref|NP 178290.1| DNA binding / protein binding / zinc ion binding [Arabidopsis thaliana] >gi|4220491|gb|AAD12714.1|'    M------------------------------------------------------------------------------------------------------------------AITAYDALTERQKAPKVLLINDFAISSSSSSPPFF--------NLAATFRDNIRSFLREYAEI----------EDYTIDGATVSTIFLG-------SQANGVVFPLYIIEQQISDSS-PNPLCDFCRCFGWGHHYVTKRKYHMIIPNRDEWN---------------------------------------------------------------------------EPLKRESLTLSSHLMHGLIHCNGFGHLLCINTDLDDP-------------------------------------NHLSGDQIMDFWDRLCSTLHTRKISLDDTSKKGAMDLRLLHGVAYGRPWFGKWDYMFSHGSFGVKKDLYWRAILTLSSIEV-DKILEELSGTSKGRVMKKIIDFYRGS--TESPLATLSDLLRFML---GFISKAPIERKTAMALVAMSLDHVSYPTLRADENSEVCTSPDQESDDNGYESGRDTVLDDHNTTTSGIKPPQ--YYSFDDLSRREHSRWPGRRLNDAAQAVLKVFKERNS----TISRQDLREAVRSSIGDTGLIDFLLKHIDKVLIG--DQIVQRSTNPKSRMLQFSLRTINSRVQEQKRKKKRKVKPQETSEC----TSTTPGLSPYDDILYLYQNLLLTYPD------------SDLYSEASQVILKCKSFVKEWSYQE-------------QNHLTVSCQVLPNHEELLRDFTRLLPPGDLVAVPENATIRELKSAAEKVLRDTYCITETFEVLEIRNRYLE-KLDDNVSLKSQGNTEFMVKGFGLD-------------IGTELRYEGGFDDWTVDCKCGARDDDGERMVACDACKVWHHTLCNSIEDDEAVPSVFLCNMCYGD---------SLRSKKRNLSIR----------------------------------------   [697]
lcl|Ppa_MMD1_3_1_unnamed_protein_product                                    ?RRGTHSFDSHLEIRSSTVLGAGKHPAFVVRRQIGLSVTNFSMATRGGYMVSRAPVSDCLMYPIASG---------SQLRLRFRSKVNRICVGADVVSEAH--SSDYLPTIACGMFATRDRAIRKRKRGERLFSFHNFADPGFPA-------------DYDGPFRDNVRTFLEECAES-----------EVTVDGLPGWCVALE------DDSKQSARVDLLVFVEGVQDT--IHPYCDQCRCIGWSHHPVSNKRYHFIIPAPDHPERSKRANGILGAKICTNCKEPLLSGYLGCPSCGD------------------------------------------EALAAGFLYSQSHLLHGVIHCNGFGHLLRINGR--EKGS-----------------------------------DSSSGREIMDLWDRMCAMLRARKVSVEDVAKKCSLELRLLHAVSYGESWYGRWGYKFGHGSFGITQQMYVKAVEAIREMPL-RVMGQHFEGVDQD--VLGIIALYQRI--SGQILQTVGDLIRFMM---ELKVRLPEHPETKGISKALKDNDRRSGSMS--------------------------------------------PAVSSSPPTDMPSRWSLKRLDLATQVIVEALKSCDRK---WMPRQDVRDAARVYIGDTGLLDYVLKSLGDRVVG--NHIVRRAVNPITKVLEYSLEDAITAAGVVRDQSRCQAPET---------ACEVGRTQVLKDIVYIYKNVLENYKPAR---TSGIKHMLTAIPTAARIILDTKQFIKDYRGELTRKSANNDWNMDDDELLRVMCTVVLNDDDPMR--NRPSPPPELVVLPPHATVRDLKLEAQRAFRETYYIMHSFCVESIPDLVG--DDEDLLFGAIESGSHVRIDGIGIH-------------TRHDWRYEGGIESWTVDCPCGTKDDDGERMIACDVCEVWQHTRCGGISDMDVIPQRFLCHRCSVNLNFYHTML-----------------------------------------------------   [794]
lcl|Ppa_MMD1_26_1_unnamed_protein_product                                    ?-------------------------------------------------CDRAPPTSSPAVPLTRSFLRMLITFYMTLKSSWKHILCFISWLHEVVMRAAGLKLDLNAHLLAGMFISRERAIRKRKRGERLFSFHSFADPGFPA-------------DYDGPFRDNVRTFLEECAES-----------EVSVDGLPGWCVTLQ------DDSKQSGRVNLLVFVEDVQDS--LHPYCDQCRCIGWSHHPVSNKRYHFIIPASDNPERSKRTNGILSAKICLNCKEPLPSGYLRCPSCGD------------------------------------------EAVPAGFLYSQSHLLHGVIHCNGFGHLLRINGR--EKGS-----------------------------------DSASGREIMDLWDRMCAMLRARKISVEDVAKKCSLELRLLHAVGYGEPWYGRWGYVFGHGSFGITQQMYVKAVEAIREMPL-RVMAQHFEGVDQD--VLNIIVLYQRI--SGQTLQTVGDLIRFMM---ELKVRLPDHPETKGMSKGLKDNHRRSSSLS--------------------------------------------PTVSSTPPTEMPSRWSLKRLDLATQVIVEALKSCDKK---WMPRQDVRDAARVYIGDTGLLDYVLKSLGNRIVG--NHIVRRAVNPITKVLEYSLEDAATAAGAVRDQSRCQAPET---------TCEIGRTEVLKDIVYIYKNVLENYKPAR---TSGIKHMLTAIPTATRIILDTKQFIKDYRGELTRKSANNDWNMDDDELLRVMCTVVLNDEDPVR--NRPSPPPELVVLPPHATVRDLKLEAQRAFRETYFIMHSFCVESIPDLVC--DDEDLLFGTIESGSHVRVEGSGIH-------------TCHDWRYEGGMESWTVDCPCGTKDDDGERMIACDVCEVWQHTRCGGISDMDVIPQRFLCHRCSINLTFYHTML-----------------------------------------------------   [756]
'gi|50918323|ref|XP 469558.1| putative collagen [Oryza sativa (japonica cultivar-group)] >gi|28301925|gb|AAO38818.1| hypothetica'    M------------------------------------------------------------------PSMRALERLASWPTPPPPPPPPPPPAKAAAAEAERPCPPSSAATTSSSSSSSASAAPAAAGAPRVYPLRDFPGREAA--------------GLGGAFRDNVRWLLRQWGGASPASPAAGGPGSASAAVAVAWRVLLS-------DDRTGVVVPIFAVEEPVASS--PKPLCDYCRWAGWSHHWVSKRKYHFIIPAPADWDR--------------------------------------------------------------------------QLAADVILGRTDHLLHGLIHSNGFGHLVMLRGR--DGGS-----------------------------------TALSGRDIMDIWDCLCSALRARAVSVVDFSQKRSLDLRLLLSVAHGDTWFTRWGYCLARGCFCVSTSTYAASVEALAALPV---------DYLRSRHVRRVVTIYRRL--SNKPLVTVREFLRCLL---DWKHLEPPLQLPPVKTCTRLQFMLPKPSVMKRHRQQP-------------------------------------CQRFEDVIDLLQCRWSKKRLLDAAEVVVDRLLEHGSGA--EMTRQAVRDAARGAIGDTGLLDFVIKSLGDTIVG--NYIVRRVPDAETRVLHFSLEEYEEPTPALLDVEVECTPLPPV-------VRWPSTVEVERDLRAVYRAMV------------------EVRSEAAQAVLDCKHWVKWWGLGDES-----------DDQLRFFVEWQPQPWEAAE-LIRPMPLGEIVVVPLHASMGELLVESEHALRDTYYFFEEFQAEGLHGIAGE-KWDPVMLGGAENGDTISVYGNGAD-------------METELRCHGGLDLWEVRCVCGAQDDDGERMIACDACDVWHHTRCVGIADSEPVPPLFLCVLCGGALMAAGPINS----------------------------------------------------   [697]
'gi|15242181|ref|NP 197618.1| MS1 (MALE STERILITY 1); DNA binding [Arabidopsis thaliana] >gi|9757806|dbj|BAB08324.1| unnamed pro'    M------------------------------------------------------------------------------------------------------------ANLIRTDHQQHIPKKRKRGESRVFRLKTFGESGHPAE------------MNELSFRDNLAKLLEFGHFE-------------SSGLMGSWSFQLE-----IQRNPNPLYVLLFVVEEPIEAS--LNLRCNHCQYVGWGNQMICNKKYHFVIPSKETMAAFLKLEGGGYAFPE-------------------------------------------------------------KESFSHLVELQGHVLHGFFHSNGFGHLLSLNGI--ETGS------------------------------------DLTGHQVMDLWDRLCTGLKARKIGLNDASHKKGMELRLLHGVAKGEPWFGRWGYRFGSGTYGVTQKIYEKALESVRNIPL-CLLNHHLTSLNRETPIL--LSKYQSL--STEPLITLSDLFRFML---HLHSRLPRDNYMSN------------------------------------------------------------SRNQIISIDSTNCRWSQKRIQMAIKVVIESLKRVEYR---WISRQEVRDAARNYIGDTGLLDFVLKSLGNQVVG--NYLVRRSLNPVKKVLEYSLEDISNLLPSSNNELITLQNQNSMGKMATNGHNKITRGQVMKDMFYFYKHILMDYKGVL----GPIGGILNQIGMASRAILDAKYFIKEYHYIRDTSAKTLHLDR--GEELGIFCTIAWKCHHHNN--EIKVPPQECIVVKKDATLSEVYGEAERVFRDIYWELRDVVVESVVGGQI--EITRVDEMALNGNKGLVLEGNVGMMMNIE--------VTKCYEDDDKKKDKRIECECGATEEDGERMVCCDICEVWQHTRCVGVQHNEEVPRIFLCQSCDQHLIPLSFLP-----------------------------------------------------   [672]
'gi|15554515|emb|CAC69664.1| male sterility 1 protein [Arabidopsis thaliana] >gi|15554513|emb|CAC69663.1| male sterility 1 prote'    M------------------------------------------------------------------------------------------------------------ANLIRTDHQQHIPKKRKRGESRVFRLKTFGESGHPAE------------MNELSFRDNLAKLLEFGHFE-------------SSGLMGSWSFQLE-----IQRNPNPLYVLLFVVEEPIEAS--LNLRCNHCQYVGWGNQMICNKKYHFVIPSKETMAAFLKLEGGGYAFPE-------------------------------------------------------------KESFSHLVELQGHVLHGFFHSNGFGHLLSLNGI--ETGS------------------------------------DLTGHQVMDLWDRLCTGLKARKIGLNDASHKKGMELRLLHGVAKGEPWFGRWGYRFGSGTYGVTQKIYEKALESVRNIPL-CLLNHHLTSLNRETPIL--LSKYQSL--STEPLITLSDLFRFML---HLHSRLPRDNYMSN------------------------------------------------------------SRNQIISIDSTNCRWSQKRIQMAIKVVIESLKRVEYR---WISRQEVRDAARNYIGDTGLLDFVLKSLGNQVVG--NYLVRRSLNPVKKVLEYSLEDISNLLPSGNNELITLQNQNSMGKMATNGHNKITRGQVMKDMFYFYKHILMDYKGVL----GPIGGILNQIGMASRAILDAKYFIKEYHYIRDTSAKTLHLDR--GEELGIFCTIAWKCHHHNN--EIKVPPQECIVVKKDATLSEVYGEAERVFRDIYWELRDVVVESVVGGQI--EITRVDEMALNGNKGLVLEGNVGMMMNIE--------VTKCYEDDDKKKDKRIECECGATEEDGERMVCCDICEVWQHTRCVGVQHNEEVPRIFLCQSCDQHLIPLSFLP-----------------------------------------------------   [672]
'gi|51535875|dbj|BAD37958.1| putative male sterility 1 protein [Oryza sativa (japonica cultivar-group)]'                             M---------------------------------------------------------------------------------------------------------------APKMVISLGSSRRRKRGEMLFRFEAFCQPGYPANF-----------AGAGGFRDNVRTLLGFAHLE-----------AGVHGETKCWSFQLE------LHRHPPTVVRLFVVEEEVAAS--PHRQCHLCRHIGWGRHLICSKRYHFLLPRRESAAEADGLCFAINHGGGGGAEKAS------------------------------------------------------SKGTTTTASSRGHLLHGVVHLNGYGHLVALHGL--EGGS-----------------------------------DFVSGHQIMDLWDRICSALHVRTVSLVDTARKGHMELRLLHGVAYGETWFGRWGYRYGRPSYGVALPSYRQSLHVLGSMPL-CVLVPHLSCFSQELPMV--VTKYQAI--SGHKLLSLGDLLRFML---ELRARLPATSVTAM--------------------------------------------------------------DYRGIMSEASCRWSAKRVDMAARAVVDALRRAEPAAR-WVTRQEVRDAARAYIGDTGLLDFVLKSLGNHIVG--NYVVRRTMNPVTKVLEYCLEDVSSVLPAVAAGGGVPAQGKMRV------RFQLTRAQLMRDLVHLYRHVLKEPSQAL------TGGAFGAIPVAVRMVLDIKHFVKDYHEGQAAASSNGGGGFG-HPHINLCCTLLVSNGSPEL-----APPYETVTLPAHATVGELKWEAQRVFSEMYLGLRSFAADSVVGVGAD-QEGLPVLGLVDVGSAVVVQGSVGEQINGEDHERKEEAAAAAVCEGSGGGERVVDCACGAVDDDGERMACCDICEAWQHTRCAGIADTEDAPHVFLCSRCDNDVVSFPSFNC----------------------------------------------------   [679]
lcl|Smo_MMD1_13_1_unnamed_protein_product                                    M---------------------------------------------------------------------------------------------------------------------VLYRPPKRARVVERFSLERFGSGGYPA-------------DFSGPFRSNVRAFLNEFGQM----------MAAPMPGVQRWCVPLV--------SQRGAEQSLLVLEELPFES--GALGCSHCRIIGWSHHPVCGARYHFILHAPGKLEALGVGKGHKLCSHCGSVIASSIT----------------------------------------------------SSSRTIVLENTSHLLHGIIHSNGYGHLLRVNGF--EGGS-----------------------------------SSLSGREIMNLWDRLCTMMRARKVSVLDASKKFGTSFRLLHAVAKGQPWYGLWGYQFGRGSFGITDAAYKKAVNQIASTPLSFFLDLGDERLRRI------ATYYRNG-----RTGNLQELVSHFM---ELLHALSSKATGSKATVPAGVNA---------------------------------------------------PPAPAPAPNRNSQRWSAKRLDKTLDVLLTALRQFGLNE--WMPRIKLREQARLHIGDTGLLDHSLCSFVGKIVG--DLVVQRRRDEQFRQLEYRLARIESPEIQDKKEE----------------ADAPEFSKVLDDLRYLYSKVL----------AGGLLPEDDPLAQASRTVLDTKHFIKDYNGNSETDPCDEPG----AEVFRVQCRMESVEQGGDQ----GGAPSELVVLPASATVGDLKREAAKAFRDVYPSLGQLRVTSIPVLEGEADERPLKLVKIQRTAEVAIRATGIDN------------RFSAGRFEKGVDDWVVNCRCGARDDDGERMAACDSCGVWSHTRCAHIRDGDDVPEQFFCGGCT---------------------------------------------------------------   [638]
'gi|18398841|ref|NP 564424.1| DNA binding / protein binding / zinc ion binding [Arabidopsis thaliana] >gi|14334762|gb|AAK59559.1'    M-------------------------------------------------------------------------------------------------------------AVMNGGRATKRARRSNRISADLYDFSTFPTAEINGES-----------TTLPPFRDGVRTFLATHARV-------TFPPSTLFSSLMTWQIMLRPGDSTDGSDLSSKLVSLDVVEEDVTRSS-RSVYCEHCCVVGWSSHPVCRKRYRFIIRSGGDTKACTRCGNTQNLSEGSNCKWCSMALDI-------------------------------------------------ENWVYSQLEDNTHLLHGVIHSNGYAHLLCLNGR--EGGS-----------------------------------GFLTGRAIMDFWDRLCSSLAVRKASVMDVSRKYGMDYRLLHGITRGCSWYSEWGYEFKSGSYALTKEAYQSAVDTLSAIPL-SEFLFQGRKPRTQ--LHSIISFYQSL--SCSELVTVKDLFSFLL------------------------------------------------------------------------QMIRENSSKPASKSSVLCAWSKSDVERVQQTMVKILKASGRPQANWVTRWALKRSICKS-ASPQLIDYCLKHFGGVLVDDGSRVVSSRCNPGSNDFEYRLESVNNVHRLSNQD-----------------VNNASVEHVKQDLRYLYETLLHPQ----TMAEFRSRATREKMIDAATKILDCKHFIKDYLSSTVN-----------PVAINLWCCVELSDELKES----PAPPPERLVLPLNATVSDLKIEAAKAFQEVYAMFKRFEVEELLGYGSI-DDSITLKFLVGTNGVIRIKGRCSKH------------GLLRYRMERGVDNWKVDCKCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIEL----------YSKKPKQ----SKKERGSSQVPKAGFVCRGESAAMGSGSNLSVTLRVG---   [697]
'gi|34907348|ref|NP 915021.1| putative male sterility 1 protein [Oryza sativa (japonica cultivar-group)] >gi|22202666|dbj|BAC073'    M-------------------------------------------------------------------------------------------------------------------VVNSRPLKRARTRVEARDFAGFPPAGDG--------------GAAGTFREAVRGFLARYARLLPLPSIFSPAAAAAPPHLLTWRVSLR-VGEEGDEEGGGGAVELNVVEEDVLRS--RSVYCDQCRVVGWSGHPVCGKRYHFIIENDNNQVCGKRHSCCLRCGTPTVAGESR-----------------------------------------CLLCNFDMDGEELEECGYMHLDDNTHLLHAVVHANGYGHLLRVNGR--EGGS-----------------------------------RCLTGRDIMSFWDRLCKVLHVRKVTVMDISKKHGMEYRLLHAITSGHPWYGEWGYKFGAGSFALTSDTYQEAVDTLSGIQL-ALYFSHRQPIRTP--LQNTIALYWAL--SDRQLVTVRDLFRFIM---HLLHQARKKNETSKPT----------------------------------------------------------TDEHKEVASNVLCKWTKEDIDRAETAMLKVLRVVQPGQ--WVSWRALRGAASKAVDSQELLDYSLRGLGGKLMDD-GHFIAVRCNAETSAIEYRLEDNSNQSVDAA-------------------AFGPSVDHLLHDLKFLYNALLNPE----TMLASQPEVIGASSHSAAAKILDCKQFIKHYDQHTPRAPLN-------PFLLSVRCSIELLDHPKDY----TAPPVELVLLPASATLAELKIQATRAFQETYLMFQSYQVEQLPDFPNF-SDTTLVKHVLGSSQLVRVRGRCTGDNR----------RIVQFRMERGLENWTVDCTCGAKDDDGERMLACDVCGVWQHTRCSGISDFDDVPEKFICRKCASP----------RRGKGRG----GGGGNGGSRMDVSAAGRCKDEIGSSVGGAGKFGRMATVG-   [716]
lcl|Smo_MMD1_28_1_unnamed_protein_product                                    M-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EPYTVEGMPTWSLLLE-----DDRNLSSGRLNLLIMEESTANS--MHPHCDHCRCIGWSHHPVSIRRYHFIIPGPEIDDEA-------------------------------------------------------------------------AATQSSILDLQDHLLHGLLHCNGYGHLLRVNGR--EKGS-----------------------------------KLASGREIMDLWDRICAMLRARKVSVEDIAKKKGLELRLLHCVAYGESWYSRWGYKFGHGSFGITQQMYSKAIEAIRGMPL-SVMIQHFDGVDAE--VLEIVSLYQKM--SGQALQTVGDL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [228]
lcl|Smo_MMD1_9_1_unnamed_protein_product                                    M-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EPYTVEGMPTWSLLLE-----DDRNLSSGRLNLLIMEESTANS--IHPHCDHCRCIGWSHHPVSIRRYHFIIPGPEIDDEA-------------------------------------------------------------------------AATQSSILDLQDHLLHGLLHCNGYGHLLRVNGR--EKGS-----------------------------------KLASGRELMDLWDRICAMLRARKVSVEDIAKKKGLELRLLHCVAYGESWYSRWGYKFGHGSFGITQQMYSKAIEAIRGMPL-SVMIQHFDGVDAE--VLEIVSLYQKM--SGQALQTVGDL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [228]
lcl|Smo_MMD1_5_2_unnamed_protein_product                                    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNLWDRLCTMMRARKVSVLDASKKFGTSFRLLHAVAKGQPWYGLWGYQFGRGSFGITDAAYKKAVNQIASTRLSFFLDLGDERLRRI------ATYYRNG-----RTGNLQELVSHFM---ELLHALSSKATGSKATVPAGVNA---------------------------------------------------PPAPAPAPNRNSQRWSAKRLDKTLDVLLTALRQFGLNE--WMPRIKLREQARLHIGDTGLLDHSLCSFVGKIVG--DLVVQRRRDEQFRQLEYRLARIESPEIQEKKEE----------------ADAPEFSKVLDDLRYLYSKVL----------AGGLLPEDDPLAQASRTVLDTKHFIKDYNGNSETDPCDEPG----AEVFRVQCRMESVEQGGDQ----GGAPSELVVLPASATVGDLKREAAKAFRDVYPSLGQLRVTSIPVLEGEADERPLKLVKIQRTAEVAIRATGIDN------------RFSAGRFEKGVDDWVVNCRCGARDDDGERMAACDSCGVWSHTRCAHIRDGDDVPEQFFCGGCT---------------------------------------------------------------   [453]
'gi|62732779|gb|AAX94898.1| PHD-finger, putative [Oryza sativa (japonica cultivar-group)] >gi|62734539|gb|AAX96648.1| PHD-finger'    M----------------------------------------------------------------------------------------------------AVRRRGASAVAVHGGGGRVPKRARVTAEPSLLDVRAFPGQKEEGEKQPARGGGKKSSSSSSTFRAQVRGFLARCAVA-----VPASEAGELSPGMSSWHVGFT-------TAGGEAVAVMEVVEEEVARA--RRVYCEHCTVAGWSKHPVCSKRYHFIIRNENETGTSKTCRRCGFMVALQETRCPS-------------------------------------------CNHVGLSRDDPEDWDYVQLESPRHLLHGIVHENGFGHLVRINGR--EGGS-----------------------------------SVMTGSQLINFWDRLCRYLRVRKVSVIDVSKKYGADYRSLHAVATGCSWYGLWGFKLSSGSFGITPQDYSKAVESLSSVPL-SNFFPHTRSPRNQ--LQNTIAFYQSL--SRHPLTTIRELFAYIM---ELATGKSVHK------------------------------------------------------------------EKMAYDANYQEEFPEEELQRATNIALKILRAADR----WVATRTLKAVTSHPIGSPQLVDYCIKTLGGTRTDD-GMVVAIRCNSEMNTVEYRLTTETLFPPNN--------------------VCTLTQDHLFRDIKFLYDALLYPY----TMHPYMPEENYQHAKRSAMILLDCKQFIKHYDLEEDFLPQN-------PSQLHIWCQVELADQVDDP----PCIPAELITLPQAATIADLKGEAARAFRDIYLMLQSFVADQLLDCATA-SDTTQIKLLFGAKGAVHIKGRCIGGER----------RFAIYRMERGVDKWTVKCSCGATDDDGERMLSCDTCHMWMHTRCAGISDFDRVPKRYVCKSCKLT------------HKPKS----SGPRLMYSSAPNKRCKTGTGSFSNAAEGLLWPQIS-----   [715]
'gi|15226100|ref|NP 178796.1| unknown protein [Arabidopsis thaliana] >gi|20198276|gb|AAM15492.1| hypothetical protein [Arabidops'    M----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLWDRFCVNLHTRKITLEDESQKRSMDLRLLHGVAYGHSWFGKWGYRFCSGSFGVEEHHYHRAIAFLTSISLVDDITANFRENKANLNIGDIVRCYRDM--SEIQLTTLQDLLRFML---TIKSRAPPIRIPIGKI-------------------------------------------------------------------------------EAPSVVLPSMKAYGTRACPQV--------------------------------------------------------------------------------------------------------------------------KQCPKDKEKSVKCRKF------------------------------------------ALPLPLQACFHFPFRSSMTLLSGSFRS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [196]
'gi|13449333|ref|NP 085515.1| hypothetical protein Atmt p42 [Arabidopsis thaliana] >gi|1785716|emb|CAA69739.1| unnamed protein p'    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDLRLLHGVAYGHSWFGKWGYRFCSGSFGVEEHHYHRAIAFLTSISLVDDITANFRENKANLNIGDIVRCYRDM--SEIQLTTLQDLLRFML---TIKSRAPPIRIPIGKI-------------------------------------------------------------------------------EAPSVVLPSMKAYGTRACPQV--------------------------------------------------------------------------------------------------------------------------KQCPKDKEKSVKCRKF------------------------------------------ALPLPYRLAF-----TSLSVVV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [160]
lcl|6287_Cre_unnamed_protein_product                                    M------------------------------------------------------------------------------------------------------------------------------------------AQQFQKGGFPWLPTSVPAPEYYNSFKYNILDFLRQYGQL--------VPLQLEPCSTRVWLVPLR-------HKTVSGPVKLHVYEEHIDEDSGAPPTCDQCRNMGWQHHPVSNRRYHFILPSPAVLADPDQLPAVVEAAAAGKLDPSRGPLKLCMEVNAGAAAAAAAAASPGKEKGEGGEGGGEGEADD-------------EGEPTSIFDSSTHCLHGVIHCNGFGHLLRMNGR--DGEAATAAAMAAAATSDGNESSAAAVTAAAAAAAAAANVNTLAGPELMGLWDKLCSTLRAREVSVEDVSNKASMLLRLLYSAAHMCTWYGKWGYGFGRAAFNYGAEEYEAAVKAIHAAPL-SALVKDMEGVDPVAIKI--LRTYAQLPPAMPAEATLGQLLQRILFFV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SRPE-LLKEVCVY--------------------------------------------------------------   [386]
;
END;


BEGIN CODONS;
	CODESET  * UNTITLED = Universal: all ;
END;


BEGIN ASSUMPTIONS;
	OPTIONS  DEFTYPE=unord PolyTcount=MINSTEPS ;
	EXSET * UNTITLED  =  1-450 493-1055;
END;


BEGIN MacClade;
	Version 4.0  87;
	LastModified -1032947563;
	FileSettings editor  '0' '0' '1' '1';
	Singles 100;
	Editor 00011001111111100100010010 '1' '8' Geneva '8' '490' '1' all;
	EditorPosition  '47' '21' '929' '1509';
	TreeWindowPosition  '46' '6' '1131' '1550';
	ListWindow Characters closed Geneva '9' '50' '25' '273' '366' 000;
	ListWindow Taxa closed Geneva '9' '50' '10' '225' '490' 100000000;
	ListWindow Trees closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow TypeSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow ExSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow CharSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow TaxSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow CharPartitions closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow CharPartNames closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ;
	ChartWindowPosition  '52' '30' '1118' '1540';
	StateNamesSymbols closed Geneva '9' '10' '50' '30' '148' '220';
	WindowOrder  Data;
	OtherSymbols &/ 00 ?-;
	Correlation  '0' '0' '1000' '0' '0' 10011010;
	Salmo 00000001;
	EditorFile  '4';
	ExportHTML _ MOSS  '100' 110000;
	PrettyPrint 10;
	EditorToolsPosition  '820' '57' '115' '165';
	TreeWindowProgram 10;
	TreeWindow 0000;
	Continuous  '0' '3' 1;
	Calculations 0000001;
	SummaryMode  '0' '0' 0;
	Charts  Geneva '9' (normal) 0010;
	NexusOptions  '0' '0' '50' 001011001;
	TipLabel  '1';
	TreeFont  Geneva '9' (normal);
	TreeShape  1.0 1.0 0100;
	TraceLabels 0101;
	ChartColors  '0' '0' '65535' '9' '0' 1;
	ChartBiggestSpot 1;
	ChartPercent 10;
	ChartBarWidth  '10' 1;
	ChartVerticalAxis 10101;
	ChartMinMax  '0';
	TraceAllChangesDisplay  '1' 1;
	BarsOnBranchesDisplay  '0' '0' '60000' '10000' '10000' '10000' '10000' '60000' '65000' '65000' '65000' '6' '1' 0000101;
	ContinuousBranchLabels 0;
	AllStatesBranchLabels 1;
	IndexNotation  '2' 1;
	PrintTree  10.00 '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' Geneva '9' (normal) Geneva '10' (normal) Geneva '9' (normal) Geneva '9' (normal) Geneva '9' (bold ) Geneva '9' (normal) Geneva '9' (normal) '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '1' '1' '1' '1' '0' '0' '-39' '4' '-40' '0' '1' '2' '1' '8' '0' '0' '0' '2' 1000111000000000000100000111000;
	MatchChar 00 .;
	EntryInterpretation 01;
	ColorOptions 00;
	TreeTools  '0' '5' '4' '0' '10' '4' '0' 00100111111101110;
	EditorTools  '0' '0' '0' '1000' '0' '0' '6' '3' '1' 100010101110011;
	PairAlign  '2' '2' '3' '2' '1' '1' '2' '1' '3' 1010;
	BothTools  '1';
END;