#NEXUS 
[MacClade 4.08 registered to M. Hasebe, NIBB]


BEGIN DATA;
	DIMENSIONS  NTAX=7 NCHAR=3174;
	FORMAT DATATYPE=PROTEIN  SYMBOLS = " 1 2 3 4"  MISSING=? GAP=- ;
MATRIX
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'gi|42567780|ref|NP 196664.3| ALF4 (ABERRANT LATERAL ROOT FORMATION 4) [Arabidopsis thaliana] >gi|28416705|gb|AAO42883.1| At5g11'    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MESSIEGSSESTTVTTSPSRRVRELLALCFS-------------------------SV----------------------------------------------------------------------------------------------------------------EEAGGFQDFESFVTE--LVSCLDSLYENVALDANNELENDVIEEVLDEILKVLSSPQ----------------------------MDQDVIDALSFHLPKVTSKFADISSRCLQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVEEIVDRFVEACNPR-------------------------------------------------------------------------------------------------------------DMLSILCEALDAARCYHSASTCSTPLLHGLSKVFILIQRRHYEQLKVAVPIVLNVLKDISLETDVQ----VEDLFDKALGIASSIRDVSSKLNNEEEAKVRCLLCLYVIQITAIISVSIRDK-AASCIPLVIQLEPFLTSCGLTHLGLITGNDTEKLMSTVA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GDDD-EFITSFPDISLGASLLFICAKISHEVAEAANAVLGSVVDELQNNPVKRWQAYGMLKYILSSGDLLWEFKRHAIE---------------------FLLDITKGVTSSQCNDEQIDCSDYTPGIYATLQ------------------------VLSDIPA-PHRFDVLRALVTNSRSPSMTAILLGLVKDSMSKS----------------------SLQDTDCAAVD-----------------------------THVIELVELVLR-------------------------------------------------------------------------------------------------------------------------------------------------------------------PPQGGPPLLPDQSDAIL-------------------------------------------AAL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLYRFALLFESR-----ECEAGKERSKVGSDILSKK-----------------------------NLEKAY--------------------------------------------------------------------------------------------------KEWL----------------------------------------------------------------LPL------------------------------------------------------------------------------------------------------------------------------------------------------RTLVSCSIAENLKEDHGQESSLDDVGLLNPIELVLYR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CIELVEEKLKSH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [578]
gi|45476903|sp|Q84VX3|ALF4_ARATH_Aberrant_root_formation_protein_4                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVKFAIINTLTVNETWAKLKSFGVMESSIEGSSESTTVTTSPSRRVRELLALCFS-------------------------SV----------------------------------------------------------------------------------------------------------------EEAGGFQDFESFVTE--LVSCLDSLYENVALDANNELENDVIEEVLDEILKVLSSPQ----------------------------MDQDVIDALSFHLPKVTSKFADISSRCLQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVEEIVDRFVEACNPR-------------------------------------------------------------------------------------------------------------DMLSILCEALDAARCYHSASTCSTPLLHGLSKVFILIQRRHYEQLKVAVPIVLNVLKDISLETDVQ----VEDLFDKALGIASSIRDVSSKLNNEEEAKVRCLLCLYVIQITAIISVSIRDK-AASCIPLVIQLEPFLTSCGLTHLGLITGNDTEKLMSTVA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GDDD-EFITSFPDISLGASLLFICAKISHEVAEAANAVLGSVVDELQNNPVKRWQAYGMLKYILSSGDLLWEFKRHAIE---------------------FLLDITKGVTSSQCNDEQIDCSDYTPGIYATLQAVTLLIMYAPDADLRKKTFEALKRVLSDIPA-PHRFDVLRALVTNSRSPSMTAILLGLVKDSMSKS----------------------SLQDTDCAAVD-----------------------------THVIELVELVLR-------------------------------------------------------------------------------------------------------------------------------------------------------------------PPQGGPPLLPDQSDAIL-------------------------------------------AAL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLYRFALLFESR-----ECEAGKERSKVGSDILSKK-----------------------------NLEKAY--------------------------------------------------------------------------------------------------KEWL----------------------------------------------------------------LPL------------------------------------------------------------------------------------------------------------------------------------------------------RTLVSCSIAENLKEDHGQESSLDDVGLLNPIELVLYR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CIELVEEKLKSH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [626]
'gi|9795155|emb|CAC03451.1| putative protein [Arabidopsis thaliana]'                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVKFAIINTLTVNETWAKLKSFGVMESSIEGSSESTTVTTSPSRRVRELLALCFSVSFLSSSSPRFGSNEKFAANFVIFQSV----------------------------------------------------------------------------------------------------------------EEAGGFQDFESFVTE--LVSCLDSLYENVALDANNELENDVIEEVLDEILKVLSSPQ----------------------------MDQDVIDALSFHLPKVTSKFADISSRCLQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVEEIVDRFVEACNPR-------------------------------------------------------------------------------------------------------------DMLSILCEALDAARCYHSASTCSTPLLHGLSKVFILIQRRHYEQLKVAVPIVLNVLKDISLETDVQ----VEDLFDKALGIASSIRDVSSKLNNEEEAKVRCLLCLYVIQITAIISVSIRDK-AASCIPLVIQLEPFLTSCGLTHLGLITGNDTEKLMSTVA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GDDD-EFITSFPDISLGASLLFICAKISHEVAEAANAVLGSVVDELQNNPVKRWQAYGMLKYILSSGDLLWEFKRHAIE---------------------FLLDITKGVTSSQCNDEQIDCSDYTPGIYATLQAVTLLIMYAPDADLRKKTFEALKRVLSDIPA-PHRFDVLRALVTNSRSPSMTAILLGLVKDSMSKS----------------------SLQDTDCAAVD-----------------------------THVIELVELVLR-------------------------------------------------------------------------------------------------------------------------------------------------------------------PPQGGPPLLPDQSDAIL-------------------------------------------AAL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLYRFALLFESR-DKAIECEAGKERSKVGSDILSKK-----------------------------NLEKAY--------------------------------------------------------------------------------------------------KEWL----------------------------------------------------------------LPL------------------------------------------------------------------------------------------------------------------------------------------------------RTLVSCSIAENLKEDHGQESSLDDVGLLNPIELVLYR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CIELVEEKLKSH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [655]
'gi|50943587|ref|XP 481321.1| unknown protein [Oryza sativa (japonica cultivar-group)] >gi|38175670|dbj|BAD01375.1| unknown prot'    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDAGDTSAAAAVAPTPARLREALAALSKAFESGDCSDGSAAAAVS--------------------------------------------------------------------------------------------------------------------------------------------DLLNAAADAADAEADAEDEAAAGVVEEMLREVHAFLSSPS----------------------------SNQLAIDALSLELVKPVAKLGALMRNCWD-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IANAIIEFFVSNCNPR-------------------------------------------------------------------------------------------------------------DMLSILCEAVDAPLAS-NGSVYFVLLFKELAKVLVLIQRRHTEQVKVTLPAVLRVMNAVIPECDEEHGKIIVDMYNAALRIGNAIQEMCKKMVNQTNEELCSVLSLYSLQNIALVSRCKQQHILSACGSVVLQHSKILTFCGFTYLGLLTGNDVTSATDKIS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KDEDADLLECFSFAMNGANLAVIWTYMDDEISKYAGAELESALKDVKGNHTRMWQAINILRYVLSSTHYPWVIKSHSLD---------------------LLLTIANESRIEEIND-HVDVSSSGPQIFATLKAIESVMISAPDALMRKKAFATLKQVISMVPS-SQRFNILQALIKNSIFPSLTALLLDLVKDEVSREIRRADQ--------DIVESDQLQDGGEWPPPWF-----------------------------SHALELVELILK-------------------------------------------------------------------------------------------------------------------------------------------------------------------PPEGGPPCLPDHGEQVL-------------------------------------------SAL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLLRFVLIIDSR-------------GSRSRKMFGEE-----------------------------TMRKVY--------------------------------------------------------------------------------------------------SEWL----------------------------------------------------------------MPL------------------------------------------------------------------------------------------------------------------------------------------------------RPIVAGIQSESEEDGSDV--ANHIMCSLNPVQLVLYR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CIELAEEKMKGF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [607]
lcl|Ppa_At5g11030_1_1_unnamed_protein_product                                    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKDEVVKAWPRNPQQQGEPNSAIHLAGGKQQDRDTASHFLK-----------------------------EEILEVIGSVLR-------------------------------------------------------------------------------------------------------------------------------------------------------------------PKNGAPPDLPAQIDPVQ-------------------------------------------SAV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLYRFILIRESS------------GKTNYTGVLSKE-----------------------------NLAKAR--------------------------------------------------------------------------------------------------SQWL----------------------------------------------------------------LPL------------------------------------------------------------------------------------------------------------------------------------------------------REVMEGLSQQLREEDGDM--SADMGLAIDSLQSVVYR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CLELNEEALAYL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [157]
lcl|Smo_At5g11030_2_1_unnamed_protein_product                                    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VSLLLTFAKDEVDSAWR--------------------SEGRELNPFVS-----------------------------ERVLELVEIVLR-------------------------------------------------------------------------------------------------------------------------------------------------------------------PKEGAPPNLPQNLDAVV-------------------------------------------GAL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLYRFLLLREKS------------GGTNYTGILSRA-----------------------------ELVKAK--------------------------------------------------------------------------------------------------SQWL----------------------------------------------------------------EPL------------------------------------------------------------------------------------------------------------------------------------------------------RAAISAIPPD----------DPEIALHVDALQMTRSR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CLELVEAELGQP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [136]
lcl|Ppa_At5g11030_2_2_unnamed_protein_product                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------?EIARAWPPSPQQQKEPIRDANPLRERLHTGAFASPFIS-----------------------------NDVLDVIGSVLR-------------------------------------------------------------------------------------------------------------------------------------------------------------------PKNGTPPDLPDQIDSVQ-------------------------------------------SAL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLYRFILIRESS------------GKTNHTGILSKE-----------------------------ALTMAR--------------------------------------------------------------------------------------------------KQWL----------------------------------------------------------------LPL------------------------------------------------------------------------------------------------------------------------------------------------------REHLGGVSVGLMGEADEM--SSAMALAIDNLQSVVYR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CLELNEEVFAQL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [155]
;
END;


BEGIN CODONS;
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END;


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END;


BEGIN MacClade;
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