#NEXUS 
[MacClade 4.08 registered to Shinohara Naoki, ERATO]


BEGIN DATA;
	DIMENSIONS  NTAX=59 NCHAR=1757;
	FORMAT DATATYPE=PROTEIN  SYMBOLS = " 1 2 3 4"  MISSING=? GAP=- ;
MATRIX
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'gi|18412567|ref|NP 567135.1| TIR1 (TRANSPORT INHIBITOR RESPONSE 1); ubiquitin-protein ligase [Arabidopsis thaliana] >gi|6805300'    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MQ-KRIALSFPE--------------EV-LEHVFSFIQ---LDKDRNSVSLVC--------KSW--YEIERWCRRKVFIGNCYA----------------VSPATVIRRFPKVRSVELKGKPHFADFNLVPDG--W-GGYVYPWIEAM-SS--------SYTWLEEI----------------------------------RLKRMVVTDDCLELIAKSFK-----------NFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRES-DVDDV-SG---HWLSHFPDTYTSLVSLNISCLA---SEV----------------------SFSA-LERLVTRC-PNLKSLKLNRAVPLE----KLATLLQR-APQLEELGTGGYT----------------------------------AEV-------RPDVYSGLSVALSG---CKELRCLSGFWDAVPAYLPAVYSVCSRL-TTLNLSYA-TVQSYDLV---KLLCQCP-KLQRLW---------------------------------------VLDY--IEDAGLEVLASTCKDLRELRVFPSEPFV---MEPNVALTEQGLVSVSMGC-PKLESVLYF-CRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLT-----LEPLDIGFGAIVEHCK-DLRRLSL---SGLL-----TDKVFEYIGTYAKKMEMLSVAF---AGDSDLGMHHVLSGCDSLRK-----------------------------------------------------------------------------LEIRDCP-FGDKALLANASK-LETMRSLWMSSCS-VSFGACKLLGQK------MPKLN----VEVIDERGAPDSR------------PESCPV---------------------------ERVFIYRTV-AGPRFDMPGFVWNMDQDSTMRFSRQIITTNGL------------------------------------------------------------------------------------------------   [594]
'gi|18412177|ref|NP 567255.1| GRH1 (GRR1-LIKE PROTEIN 1); ubiquitin-protein ligase [Arabidopsis thaliana] >gi|4262147|gb|AAD1444'    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGLRFPP--------------KV-LEHILSFID---SNEDRNSVSLVC--------KSW--FETERKTRKRVFVGNCYA----------------VSPAAVTRRFPEMRSLTLKGKPHFADYNLVPDG--W-GGYAWPWIEAM-AA--------KSSSLEEI----------------------------------RMKRMVVTDECLEKIAASFK-----------DFKVLVLTSCEGFSTDGIAAIAATCRNLRVLELREC-IVEDL-GG---DWLSYFPESSTSLVSLDFSCLD---SEV----------------------KISD-LERLVSRS-PNLKSLKLNPAVTLD----GLVSLLRC-APQLTELGTGSFA----------------------------------AQL-------KPEAFSKLSEAFSN---CKQLQSLSGLWDVLPEYLPALYSVCPGL-TSLNLSYA-TVRMPDLV---ELLRRCS-KLQKLW---------------------------------------VMDL--IEDKGLEAVASYCKELRELRVFPSEPDL---DATNIPLTEQGLVFVSKGC-RKLESVLYF-CVQFTNAALFTIARKRPNLKCFRLCVIEPFAPDYKT-----NEPLDKGFKAIAEGCR-DLRRLSV---SGLL-----SDKAFKYIGKHAKKVRMLSIAF---AGDSDLMLHHLLSGCESLKK-----------------------------------------------------------------------------LEIRDCP-FGDTALLEHAAK-LETMRSLWMSSCF-VSFGACKLLSQK------MPRLN----VEVIDEHPPESR-------------PESSPV---------------------------ERIYIYRTV-AGPRMDTPEFVWTIHKNPENGVSHLAIK----------------------------------------------------------------------------------------------------   [585]
'gi|12658970|gb|AAK01147.1| GRR1-like protein 1 [Arabidopsis thaliana]'                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGLRFPP--------------KV-LEHILSFID---SNEDRNSVSLVC--------KSW--FETERKTRKRVFVGNCYA----------------VSPAAVTRRFPEMRSLTLKGKPHFADYNLVPDG--W-GGYAWPWIEAM-AA--------KSSSLEEI----------------------------------RMKRMVVTDECLEKIAASFK-----------DFKVLVLTSCEGFSTDGIAAIASTCRNLRVLELREC-IVEDL-GG---DWLSYFPESSTSLVSLDFSCLD---SEV----------------------KISD-LERLVSRS-PNLKSLKLNPAVTLD----GLVSLLRC-APQLTELGTGSFA----------------------------------AQL-------KPEAFSKLSEAFSN---CKQLQSLSGLWDVLPEYLPALYSVCPGL-TSLNLTYA-TVRMPDLV---ELLRRCS-KLQKLW---------------------------------------VMDL--IEDKGLEAVASYCKELRELRVFPSEPDL---DATNIPLTEQGLVFVSKGC-RKLESVLYF-CVQFTNAALFTIARKRPNLKCFRLCVIEPFAPDYKT-----NEPLDKGFKAIAEGCR-DLRRLSV---SGLL-----SDKAFKYIGKHAKKVRMLSIAF---AGDSDLMLHHLLSGCESLKK-----------------------------------------------------------------------------LEIRDCP-FGDTALLEHAAK-LETMRSLWMSSCF-VSFGACKLLSQK------MPRLN----VEVIDEHPPESR-------------PESSPV---------------------------ERIYIYRTV-AGPRMDTPEFVWTIHKNPENGVSHLAIK----------------------------------------------------------------------------------------------------   [585]
'gi|15027885|gb|AAK76473.1| putative F-box protein GRR1 protein 1, AtFBL18 [Arabidopsis thaliana]'                                   ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGLRFPP--------------KV-LEHILSFID---SNEDRNSVSLVC--------KSW--FETERKTRKRVFVGNCYA----------------VSPAAVTRRFPEMRSLTLKGKPHFADYNLVPDG--W-GGYAWPWIEAM-AA--------KSSSLEEI----------------------------------RMKRIVVTDECLEKIAASFK-----------DFKVLVLTSCEGFSTDGIAAIAATCRNLRVLELREC-IVEDL-GG---DWLSYFPESSTSLVSLDFSCLD---SEV----------------------KISD-LERLVSRS-PNLKSLKLNPAVTLD----GLVSLLRC-APQLTELGTGSFA----------------------------------AQL-------KPEAFSKLSEAFSN---CKQLQSLSGLWDVLPEYLPALYSVCPGL-TSLNLSYA-TVRMPDLV---ELLRRCS-KLQKLW---------------------------------------VMDL--IEDKGLEAVASYCKELRELRVFPSEPDL---DATNIPLTEQGLVFVSKGC-RKLESVLYF-SVQFTNAALFTIARKRPNLKCFRLCVIEPFAPDYKT-----NEPLDKGFKAIAEGCR-DLRRLSV---SGLL-----SDKAFKYIGKHAKKVRMLSIAF---AGDSDLMLHHLLSGCESLKK-----------------------------------------------------------------------------LEIRDCP-FGDTALLEHAAK-LETMRSLWMSSCF-VSFGACKLLSQK------MPRLN----VEVIDEHPPESR-------------PESSPV---------------------------ERIYIYRTV-AGPRMDTPEFVWTIHKNPENGVSHLAMK----------------------------------------------------------------------------------------------------   [585]
'gi|50949123|ref|XP 493919.1| similar to Arabidopsis thaliana transport inhibitor response 1 (TIR1) (T48087) [Oryza sativa]'         --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGRGGSRAACAAA-APPWHSLPD--------------EV-WEHAFSFLP---AAADRGAAAGAC--------SSW--LRAERRSRRRLAVANCYA----------------AAPRDAVERFPSVRAAEVKGKPHFADFGLVPPA--W-GAAAAPWIAAA-AD--------GWPLLEEL----------------------------------SFKRMVVTDECLEMIAASFR-----------NFQVLRLVSCDGFSTAGLAAIAAGCRHLRELDLQEN-EIEDC-SI---HWLSLFPESFTSLVTLNFSCLE---GEV----------------------NITV-LERLVTRC-HNLKTLKLNNAIPLD----KLASLLHK-APQLVELGTGKFS----------------------------------ADY-------HSDLFAKLEAAFGG---CKSLRRLSGAWDAVPDYLPAFYCVCEGL-TSLNLSYA-TVRGPELI---KFISRCR-NLQQLW---------------------------------------VMDL--IEDHGLAVVASSCNKLQELRVFPSDPFG------AGFLTERGLVDVSASC-PMLESVLYF-CRRMTNEALITIAKNRPNFTCFRLCILEPHTPDYIT-----REPLDAGFSAIVESCR-GLRRLSI---SGLL-----TDLVFKSIGAHADRLEMLSIAF---AGNSDLGLHYILSGCKSLKK-----------------------------------------------------------------------------LEIRDCP-FGDKPLLANAAK-LETMRSLWMSSCL-LTLGACRQLARK------MPRLS----VEIMNDPGRSCPLDSL---------PDETPV---------------------------EKLYVYRTI-AGPRSDTPACVQIV------------------------------------------------------------------------------------------------------------------   [587]
'gi|50923929|ref|XP 472325.1| OSJNBa0072K14.18 [Oryza sativa (japonica cultivar-group)] >gi|21740736|emb|CAD40545.1| OSJNBa0072K'    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTYFPE--------------EV-VEHIFSFLP---AQRDRNTVSLVC--------KVW--YEIERLSRRGVFVGNCYA----------------VRAGRVAARFPNVRALTVKGKPHFADFNLVPPD--W-GGYAGPWIEAA-AR--------GCHGLEEL----------------------------------RMKRMVVSDESLELLARSFP-----------RFRALVLISCEGFSTDGLAAVASHCKLLRELDLQEN-EVEDR-GP---RWLSCFPDSCTSLVSLNFACIK---GEV----------------------NAGS-LERLVSRS-PNLRSLRLNRSVSVD----TLAKILLR-TPNLEDLGTGNLT----------------------------------DDF-------QTESYFKLTSALEK---CKMLRSLSGFWDASPVCLSFIYPLCAQL-TGLNLSYAPTLDASDLT---KMISRCV-KLQRLW---------------------------------------VLDC--ISDKGLQVVASSCKDLQELRVFPSDFYV----AGYSAVTEEGLVAVSLGC-PKLNSLLYF-CHQMTNAALVTVAKNCPNFTRFRLCILEPGKPDVVT-----SQPLDEGFGAIVRECK-GLQRLSI---SGLL-----TDKVFMYIGKYAKQLEMLSIAF---AGDSDKGMMHVMNGCKNLRK-----------------------------------------------------------------------------LEIRDSP-FGDAALLGNFAR-YETMRSLWMSSCN-VTLKGCQVLASK------MPMLN----VEVINERDGSNEMEENH--------GDLPKV---------------------------EKLYVYRTT-AGARDDAPNFVKIL------------------------------------------------------------------------------------------------------------------   [575]
'gi|18405102|ref|NP 566800.1| ubiquitin-protein ligase [Arabidopsis thaliana] >gi|34098913|gb|AAQ56839.1| At3g26830 [Arabidopsis'    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNYFPD--------------EV-IEHVFDFVT---SHKDRNAISLVC--------KSW--YKIERYSRQKVFIGNCYA----------------INPERLLRRFPCLKSLTLKGKPHFADFNLVPHE--W-GGFVLPWIEAL-AR--------SRVGLEEL----------------------------------RLKRMVVTDESLELLSRSFV-----------NFKSLVLVSCEGFTTDGLASIAANCRHLRDLDLQEN-EIDDH-RG---QWLSCFPDTCTTLVTLNFACLE---GET----------------------NLVA-LERLVARS-PNLKSLKLNRAVPLD----ALARLMAC-APQIVDLGVGSYE----------------------------------NDP-------DSESYLKLMAVIKK---CTSLRSLSGFLEAAPHCLSAFHPICHNL-TSLNLSYAAEIHGSHLI---KLIQHCK-KLQRLW---------------------------------------ILDS--IGDKGLEVVASTCKELQELRVFPSDLLG----GGNTAVTEEGLVAISAGC-PKLHSILYF-CQQMTNAALVTVAKNCPNFIRFRLCILEPNKPDHVT-----SQPLDEGFGAIVKACK-SLRRLSL---SGLL-----TDQVFLYIGMYANQLEMLSIAF---AGDTDKGMLYVLNGCKKMKK-----------------------------------------------------------------------------LEIRDSP-FGDTALLADVSK-YETMRSLWMSSCE-VTLSGCKRLAEK------APWLN----VEIINENDNNRMEENGH--------EGRQKV---------------------------DKLYLYRTV-VGTRMDAPPFVWIL------------------------------------------------------------------------------------------------------------------   [575]
'gi|18391439|ref|NP 563915.1| IPS1; ubiquitin-protein ligase [Arabidopsis thaliana] >gi|20466151|gb|AAM20393.1| transport inhibi'    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNYFPD--------------EV-IEHVFDFVA---SHKDRNSISLVC--------KSW--HKIERFSRKEVFIGNCYA----------------INPERLIRRFPCLKSLTLKGKPHFADFNLVPHE--W-GGFVHPWIEAL-AR--------SRVGLEEL----------------------------------RLKRMVVTDESLDLLSRSFA-----------NFKSLVLVSCEGFTTDGLASIAANCRHLRELDLQEN-EIDDH-RG---QWLNCFPDSCTTLMSLNFACLK---GET----------------------NVAA-LERLVARS-PNLKSLKLNRAVPLD----ALARLMSC-APQLVDLGVGSYE----------------------------------NEP-------DPESFAKLMTAIKK---YTSLRSLSGFLEVAPLCLPAFYPICQNL-ISLNLSYAAEIQGNHLI---KLIQLCK-RLQRLW---------------------------------------ILDS--IGDKGLAVVAATCKELQELRVFPSDVHG--EEDNNASVTEVGLVAISAGC-PKLHSILYF-CKQMTNAALIAVAKNCPNFIRFRLCILEPHKPDHIT-----FQSLDEGFGAIVQACK-GLRRLSV---SGLL-----TDQVFLYIGMYAEQLEMLSIAF---AGDTDKGMLYVLNGCKKMRK-----------------------------------------------------------------------------LEIRDSP-FGNAALLADVGR-YETMRSLWMSSCE-VTLGGCKRLAQN------SPRLN----VEIINENENNGMEQNEE--------DEREKV---------------------------DKLYLYRTV-VGTRKDAPPYVRIL------------------------------------------------------------------------------------------------------------------   [577]
lcl|Smo_TIR1_1_1_unnamed_protein_product                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIREDEVVLHKDSFMELEQEKEED-----EE-EGRLTTFPD--------------EV-LENVLKFVT---GHKDRNAVSVVC--------KAW--YKAEGWNREAVFIGNCYA----------------VSPDILTRRFPRLKSMTLKGKPRFADFSLVPPN--W-GAFFHPWMPVI-VE--------SYPWLEAL----------------------------------RLKRMTVSDESLFMISQLLP-----------NFRALNLVNCDGFSTEGIAAITSHCRYLQELDLQEC-LVDDR-GG---EWLSYFPESCNTLVTLNFSCLE---SDV----------------------NFEC-LEKLVSRC-RSLKKLNLNKGVTLE----QLLRLLVK-APQLTDLGTGTYS----------------------------------QMQ-------NWSQYVELRTALSN---CKDLRHLSGFWMVEPIFIPLIYPLAQNL-LSLNLSYA-TIRATEFA---KLIQRCP-KLETLW---------------------------------------VLDS--VEDRGLQTVGETCKNLVELRVFPTDH------GGQGSVTEAGLVAVSQGC-PNLSSVLYF-CKQCTNQAIETVATNCPMLTRFRLCIITPRQRDYIT-----GETMDEGFGAIVKNCK-NLSRLAV---SGWL-----SDRAFEYIGHYAKKLETLSVAF---AGESDAAMQHVLSGCPRLRK-----------------------------------------------------------------------------LEIRDSP-FGDSALLAGLHQ-YESMRFLWMSACR-VSLAGCGWLAGA------MPRLN----VEVIREQGDAEGGEGGEKGGGELVMDCSEPV---------------------------EKLYAYRTL-AGCRSDAPSWVITL------------------------------------------------------------------------------------------------------------------   [609]
lcl|Smo_TIR1_5_1_unnamed_protein_product                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIRDDEVVLHKDSFMELEQEKEEDEREEEEE-QGRLTTFPD--------------EV-LENVLKFVT---GHKDRNAVSVVC--------KAW--YKAEGWNREAVFIGNCYA----------------VSPDILTRRFPRLKSMTLKGKPRFADFSLVPPN--W-GAFFHPWMPVI-VE--------SYPWLEAL----------------------------------RLKRMTVSDESLFMISQLLP-----------NFRALNLVNCDGFSTEGIAAITSHCRYLQELDLQEC-LVDDR-GG---EWLSYFPESCNTLVTLNFSCLE---SDV----------------------NFEC-LEKLVSRC-RSLKKLNLNKGVTLE----QLLRLLVK-APQLTDLGTGTYS----------------------------------QMQ-------NWSQYVELRTALSN---CKDLRHLSGFWMVEPIFIPLIYPLAQNL-LSLNLSYA-TIRATEFA---KLIQRCP-KLETLW---------------------------------------VLDS--VEDRGLQTVGETCKNLVELRVFPTDH------GGQGSVTEAGLVAVSQGC-PNLSSVLYF-CKQCTNQAIETVATNCPMLTRFRLCIITPRQRDYIT-----GETMDEGFGAIVKNCK-NLSRLAV---SGWL-----SDRAFEYIGHYAKKLETLSVAF---AGESDAAMQHVLSGCPRLRK-----------------------------------------------------------------------------LEIRDSP-FGDSALLAGLHQ-YESMRFLWMSACR-VSLAGCGWLAGA------MPRLN----VEVIREQGDAEGGEGGEKGGGELVMDCSEPV---------------------------EKLYAYRTL-AGCRSDAPSWVITL------------------------------------------------------------------------------------------------------------------   [614]
lcl|Ppa_TIR1_4_1_unnamed_protein_product                                    --------------------------------?ECMRTV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VASSCMTPLRVVELEVAGNCVLEEAELALLLGALGQPGSTSAKTFTALESSESVEA-VMPPSVFPD--------------EV-LEHVLVFLD---SHKDRNSVSLVC--------KSW--YKAEGWSRRKVFIGNCYA----------------VSSATLIRRFPKLVSLEMKGRPRFTDFGLVPQN--W-GGFIQPWIQVM-AE--------YYPGLEGL----------------------------------KLKRMTVSDESLRMIAVAFP-----------NFRSLRLTSCDGFSTDGITEITKNCRNLAVLDLQEN-YMDIR-NG---DWLKAFPESLTSLESLNFATVKCAVDEE----------------------AFQC-LEALVARC-RCLKTLKVNKDISLG----QLRSLLLR-APQLEELGTGIYN----------------------------------QNL-------SWGKLHELQGSLKR---CKNLRSLSGLWEVIPMCLPTMYPVCLNL-TSLDLSNV-TLMTTDFT---KFISYCT-KVRRLL---------------------------------------VQDF--VGDKGLAAAAFNCKELQELRVYPVG--------VDGYVTEQGFIAISKGC-PELRKILYF-CKQMTNAAMVSFAQNCPKMTHFRLCIMKCYMEDCET-----GQPLDEGFGAVCRLCV-DLRRLSL---SGKM-----TDKTFEYIGQYAKKLEMLSVAF---AGDSDDGMQYVLDGCPSLRK-----------------------------------------------------------------------------LEVRDCP-FGDEALLTGIEK-YESMRSLWMSSCH-LTRDGCQFLASH------NSSLN----VEIIKDVDKAPL-------------EQGQYV---------------------------EKLYVYRTI-AGPRADAPHFVETL------------------------------------------------------------------------------------------------------------------   [634]
lcl|Ppa_TIR1_14_1_unnamed_protein_product                                    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MPPSVFPD--------------EV-LEHVLVFLD---SHRDRNSVSLVC--------KAW--YKAEGWSRRRVFIGNCYA----------------ASPAHLIKRFPKLVALEMKGRPRFTDFGLVPQN--W-GAFIQPWIEAM-AE--------YYPGLEEL----------------------------------KLKRMTVSDESLRMVAVAFP-----------NFRSLRLTSCDGFSTDGITEITKNCRNLAVLDLQEN-DIDIR-SG---DWLKAFPETQTSLEWLNFATVKCMIDEE----------------------AFQC-LEALVARC-PCLKRLKLNKDISLD----QLRKLLLR-APQLEVLGTGIYN----------------------------------QNL-------SWGKLHELQGSLKR---CKNLRSLSGLWEVIPMCLPTMYPVCLNL-TSLDLSNV-TLKTTDFT---KFISYCT-K--------------------------------------------VQDF--VGDKGLAAAAVNCKDLQELRVYPID--------DDGLVTEQGFIAISEGC-PELRKILYF-CKQMTNAAMTRFAENCPKMTHFRLCIMKCYMEDCVT-----GQPLDEGFGAVCRLCV-DLRRLSL---SGKM-----TDKTFEYIGRYAKNLGMLSVAF---AGDSDVGMQYVLDGCPRLRK-----------------------------------------------------------------------------LEVRDCP-FGDEALLTGIEK-YESMRSLWMSSCH-LTRDGCQFLAAN------NPSLN----VEIIKDVEKPPH-------------EQGQYV---------------------------EKLYVYRTI-EGRRSDAPHFVETLK-----------------------------------------------------------------------------------------------------------------   [566]
'gi|77551133|gb|ABA93930.1| F-box domain, putative [Oryza sativa (japonica cultivar-group)]'                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVFFPE--------------EV-VEHILGFLA---SHRDRNAVSLVC--------REW--YRVERLSRRSVLVRNCYA----------------ARPERVHARFPGLRSLSVKGRPRF-----VPAG--W-GAAARPWVAAC-VA--------ACPGLEEL----------------------------------RLKRMVVTDGCLKLLACSFP-----------NLKSLVLVGCQGFSTDGLATVATNCRFMKELDLQES-LVEDR-DS---RWLGCFPKPSTLLESLNFSCLT---GEV----------------------NSPA-LEILVARS-PNLRSLRLNRSVPLD----VLARILCR-RPRLVDLCTGSFV----------------------------------RGN-------IVGAYAGLFNSFQH---CSLLKSLSGFWDATSLFIPVIAPVCKNL-TCLNLSSAPMVRSAYLI---EFICQCK-KLQQLW---------------------------------------VLDH--IGDEGLKIVASSCIQLQELRVFPANANA-----RASTVTEEGLVAISAGC-NKLQSVLYF-CQRMTNSALITVAKNCPRFTSFRLCVLDPGSADAVT-----GQPLDEGYGAIVQSCK-GLRRLCL---SGLL-----TDTVFLYIGMYAERLEMLSVAF---AGDTDDGMTYVLNGCKNLKK-----------------------------------------------------------------------------LEIRDSP-FGDSALLAGMHQ-YEAMRSLWLSSCN-VTLGGCKSLAAS------MANLN----IEVMNRAASINEADNA---------NDAKKV---------------------------KKLYIYRTV-AGPRGDAPEFISTF------------------------------------------------------------------------------------------------------------------   [568]
lcl|Smo_TIR1_7_1_unnamed_protein_product                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVYEFPD--------------DI-LEHVLVFLS---SHRDRNSVSLVC--------KSW--YKAEAASRANLFIGNCYS----------------VSPELVARRFPKVRSLTLKGKPRFADFNLLPPH--W-GAYLLPWIVTF-AH--------ASLPLEEL----------------------------------RLKRMCVSDEALDLLATSFP-----------SFRVIVLNNCDGFSTKGLASIARNCRNLQELNLQES-LVEDH-SG--VDWISAFPDTTTSLLALHFSCLD---AAV----------------------DFDA-LDALVARN-PQLRSLGLNKKVALW----QLQKLLQRCGPQLTDLGTGSMSGIGNLNGGGAVGQLQAQMQVQVQVQ-PQPAPEQQEMI-------QWERIQDLSACLAS---CTKLQSLSGIWEAEPPCLIALYPVCLNL-LSLNLSYA-NLRNADLL---QLLSHCH-KLQRLW---------------------------------------LQDN--VEDAGLRTVANTCKDLRELRVFPADHEG------VGVVTEQGLLAISEGC-ANLSSILYF-CRRMTNSAITAMSRACSKMRRFRLCIITTRQPDHVT-----GEPLDEGFGAIVKNCK-ELKRLAV---SGLL-----TDRAFQYIGEFGKNVETLSVAF---AADSDVGLEAVFRGCTKIRK-----------------------------------------------------------------------------LEIRDCP-FGDRALLAGLER-YETMRFLWLSGCR-VSIAGCDELSKK------LPWLN----VELVKEST-----------------EDEYTV---------------------------DMLYVYRTVMASARSDRPPSVIGLRGGEYFWRTSCVCCAICRVAFSVPLFLVRRCLLLFLGTSGRHALYLRLGKSPVFND----------------------------------------------------------   [656]
lcl|Smo_TIR1_16_1_unnamed_protein_product                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVYEFPD--------------DI-LEHVLVFLS---SHRDRNSVSLVC--------KSW--YKAEAASRANLFIGNCYS----------------VSPELVARRFPKVRSLTLKGKPRFADFNLLPPH--W-GAYLLPWIVTF-AH--------ASLPLEEL----------------------------------RLKRMCVSDEALDLLATSFP-----------GFRVIVLNNCDGFSTKGLASIARNCRNLQELNLQES-LVEDH-SS--VDWISAFPDSTTSLLALHFSCLD---AAV----------------------DFDA-LDALVARN-PQLRSLGLNKKVALW----QLQKLLHRCGPQLTDLGTGSMSGIGNLNGGGAVGQLQAQMQVQVQVQPPQPAPEQQEMI-------QWERIQDLGACLSS---CTKLQSLSGIWEAEPPCLIALYPVCLNL-LSLNLSYA-NLRNADLL---QLLSHCH-KLQRLW---------------------------------------LQDN--VEDAGLRIVANTCKDLRELRVFPADHEG------VGVVTEQGLLAISEGC-ANLSSILYF-CRRMTNSAITAMSRACSKMRRFRLCIITTRQPDHVT-----GEPLDEGFGAIVKNCK-ELKRLAV---SGLL-----TDRAFQYIGEFGKNVETLSVAF---AADSDVDLEAVFRGCTKIRK-----------------------------------------------------------------------------LEIRDCP-FGDRALLAGLER-YETMRFLWLSGCR-VSIAGCDELSKK------LPWLN----VELVKEST-----------------EDEYTV---------------------------DMLYVYRTVMASARSDRPPSVIGLRGGEYFWR------------------WVRGAA---VGTSNSSI-----------------------------------------------------------------------   [623]
lcl|Ppa_TIR1_36_2_unnamed_protein_product                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MPSLFPD--------------EV-LEHVLVFLT---GHKDRNSVSLVC--------KAW--CRAEGWSRRDVFIGNCYA----------------SSPTILLRRFPKLTSLAMKGRPRFTDFGLVPSS--W-GAFIQPWIEAL-AD--------HYNGLECL----------------------------------RLKRMTVSDESLRIVALAFP-----------NFRSLRLSSCDGFTTDGLEWITRHCRHLTELDLQEN-EIQVR-GV---GWLTAFPETQTSLESLNFANIHTPLDEY----------------------DFHS-LYALVTRC-PKLTKLKLNREITLE----QMQRLLLQ-APQLEDLGTGAYN----------------------------------QNL-------TWGRLHELQSSFRR---VRNIRTLSGFWDTVPMCLPTCFPICKEL-ITLDLSTV-ALTPADFT---KFITNCV-NIQRLL---------------------------------------VQDS--VGDRGLFYVGRSCRQLRELRVYPFN--------DQSNVTEKGLVAISDGC-REMRKILYF-CKQMTNAAMIQFARNCSNMTHFRMAMVTVYDPDCDT-----KQPLDEGFGAVCKLCK-DLRRLSL---SGLL-----TDKTFEYIGTYAKKLETLSVAF---AGDTDMGMVHVLDGCPVLRK-----------------------------------------------------------------------------LEVRDCP-FGDEALLSGIDK-YESMRALWMSSCR-VTIDGVQFLASK------NPNLN----VEVIRDIEML---------------HHPEYV---------------------------EKLYVYRSI-AEPRQDAPPFVYIYSCT---------------------------------------------------------------------------------------------------------------   [570]
lcl|Ppa_TIR1_1_1_unnamed_protein_product                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MLSVFPD--------------EV-LEHVLVFLT---DHRDRNSVSLVC--------KAW--CRTEGWSRRSVFIGNCYA----------------ASPNLLLRRFPKLTSLEMKGRPRFTDFGLVPSN--W-GAFIQPWIEAL-AE--------HYAGLECL----------------------------------RLKRMTVSDESLRIIALAFP-----------NFRSLRLASCDGFTTDGLQWITRHCRHLKELDLQEN-EIQVR-SV---GWLTAFPESQTTLESLSFANIQTPLDEY----------------------DFHS-LYALVARC-PRLKRLKLNREVTLE----QMQKLLLL-APQLEDLGTGAYN----------------------------------QKL-------TWGKLHDLQASFRK---VKNIRSLSGFWDVSPRCLPTCFPICNEL-ITLDLSTV-ALTTADFT---KSTTNCV-KLRRLL---------------------------------------VQDS--VGDEGLLHVARCCKQLTELRVYPFN--------NQSNVTEKGFIAISEGC-RDMRKILYF-CKQMSNAAMIQFARNCPNMTHFRMAMVTVYDRDCVT-----NDPLDEGFGAVCKLCK-NLRRLSL---SGLL-----TDKTFEYIGMYAKKLETLSVAF---AGDTDLGMVNVLDGCPALRK-----------------------------------------------------------------------------LEVRDCP-FGDEALLSGIEK-YESMRALWMSSCQ-LTRDGVQFLADK------NPNLN----VEIIVDVEKS---------------HDPEYV---------------------------EKLYVYRSI-AGPREDAPYFVDTL------------------------------------------------------------------------------------------------------------------   [567]
'gi|13249030|gb|AAK16647.1| F-box containing protein TIR1 [Populus tremula x Populus tremuloides]'                                   ----------------------------------MITNK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KPRSSETDSNYMRDDRTEMSEDDDRSPPSNSITHDSSPTRTCTPGPGSGSSSVPEYLAPYPDQVLE--------------NV-LENVLWFLT---SRKDRNAASLVC--------RSW--YRVEALTRSDLFIGNCYA----------------VSPKRAMSRFTRIRSVTLKGKPRFADFNLMPPY--W-GAHFAPWVSAM-AM--------TYPWLEKV----------------------------------HLKRMSVTDDDLALLAESFS-----------GFKELVLVCCEGFGTSGLAIVVSRCRQLKVLDLIES-DVSDD-E---VDWISCFPDTETCLESLIFDCVD---CPI----------------------DFDE-LERLVARS-PSLKKLRLNRYVSIG----QLYRLMIR-APHLTHLGTGSFS----------------------------------PSEDVS----QVEQGPDYASAFAA---CKSLVCLSGFREIIPDYLPAINPVCANL-TSLNFSFA-DVSAEQLK---PIISNCH-KLQIFW---------------------------------------VLDS--ICDEGLQAVAATCKELRELRVFPVDPRE----DIEGPVSEVGLQAISEGC-RKLQSILYF-CHRMTNAAVVAMSKNCPDLVVFRLCIMGRHQPDHVT-----GEPMDEGFGAIVKNCK-KLTRLAV---SGLL-----TDRAFAYIGKYGKIVRTLSVAF---AGDSDMGLKYVLEGCPRLQK-----------------------------------------------------------------------------LEIRDSP-FGDAALLSGLHH-YYNMRFLWMSACK-LSRQGCQQITQA------LPRLV----VEVIKHDDNVDMD---------------EYV---------------------------DTLYMYRSL-EGPRDDAPRFVSIL------------------------------------------------------------------------------------------------------------------   [635]
'gi|18423092|ref|NP 568718.1| ubiquitin-protein ligase [Arabidopsis thaliana] >gi|22655002|gb|AAM98092.1| AT5g49980/K9P8 12 [Ara'    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTQDRSEMSEDDDDQQSPPLDLPSTAIADPCSSSSSPNKSRNCISNS-QTFPDHVLE--------------NV-LENVLQFLD---SRCDRNAASLVC--------KSW--WRVEALTRSEVFIGNCYA----------------LSPARLTQRFKRVRSLVLKGKPRFADFNLMPPD--W-GANFAPWVSTM-AQ--------AYPCLEKV----------------------------------DLKRMFVTDDDLALLADSFP-----------GFKELILVCCEGFGTSGISIVANKCRKLKVLDLIES-EVTDD-E---VDWISCFPEDVTCLESLAFDCVE---API----------------------NFKA-LEGLVARS-PFLKKLRLNRFVSLV----ELHRLLLG-APQLTSLGTGSFS----------------------------------HDEEP-----QSEQEPDYAAAFRA---CKSVVCLSGFRELMPEYLPAIFPVCANL-TSLNFSYA-NISPDMFK---PIILNCH-KLQVFW---------------------------------------ALDS--ICDEGLQAVAATCKELRELRIFPFDPRE----DSEGPVSELGLQAISEGC-RKLESILYF-CQRMTNAAVIAMSENCPELTVFRLCIMGRHRPDHVT-----GKPMDEGFGAIVKNCK-KLTRLAV---SGLL-----TDQAFRYMGEYGKLVRTLSVAF---AGDSDMALRHVLEGCPRLQK-----------------------------------------------------------------------------LEIRDSP-FGDVALRSGMHR-YYNMRFVWMSACS-LSKGCCKDIARA------MPNLV----VEVIGSDDDDDNR---------------DYV---------------------------ETLYMYRSL-DGPRNDAPKFVTIL------------------------------------------------------------------------------------------------------------------   [619]
'gi|42573021|ref|NP 974607.1| ubiquitin-protein ligase [Arabidopsis thaliana] >gi|30686516|ref|NP 567702.2| ubiquitin-protein li'    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTEEDSSAKMSEDVEKYLNLNPPCSSSSSSSSAATFTNKSRNFKSSP-PPCPDHVLE--------------NV-LENVLQFLT---SRCDRNAVSLVC--------RSW--YRVEAQTRLEVFIGNCYS----------------LSPARLIHRFKRVRSLVLKGKPRFADFNLMPPN--W-GAQFSPWVAAT-AK--------AYPWLEKV----------------------------------HLKRMFVTDDDLALLAESFP-----------GFKELTLVCCEGFGTSGIAIVANKCRQLKVLDLMES-EVTDD-E---LDWISCFPEGETHLESLSFDCVE---SPI----------------------NFKA-LEELVVRS-PFLKKLRTNRFVSLE----ELHRLMVR-APQLTSLGTGSFS----------------------------------PDNVP-----QGEQQPDYAAAFRA---CKSIVCLSGFREFRPEYLLAISSVCANL-TSLNFSYA-NISPHMLK---PIISNCH-NIRVFW---------------------------------------ALDS--IRDEGLQAVAATCKELRELRIFPFDPRE----DSEGPVSGVGLQAISEGC-RKLESILYF-CQNMTNGAVTAMSENCPQLTVFRLCIMGRHRPDHVT-----GKPMDDGFGAIVKNCK-KLTRLAV---SGLL-----TDEAFSYIGEYGKLIRTLSVAF---AGNSDKALRYVLEGCPKLQK-----------------------------------------------------------------------------LEIRDSP-FGDVGLRSGMHR-YSNMRFVWLSSCL-ISRGGCRGVSHA------LPNVV----VEVFGADGDDDEDT-----------VTGDYV---------------------------ETLYLYRSL-DGPRKDAPKFVTIL------------------------------------------------------------------------------------------------------------------   [623]
'gi|7269289|emb|CAB79349.1| transport inhibitor response-like protein [Arabidopsis thaliana] >gi|5051781|emb|CAB45074.1| transpo'    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSEDVEKYLNLNPPCSSSSSSSSAATFTNKSRNFKSSP-PPCPDHVLE--------------NV-LENVLQFLT---SRCDRNAVSLVC--------RSW--YRVEAQTRLEVFIGNCYS----------------LSPARLIHRFKRVRSLVLKGKPRFADFNLMPPN--W-GAQFSPWVAAT-AK--------AYPWLEKV----------------------------------HLKRMFVTDDDLALLAESFP-----------GFKELTLVCCEGFGTSGIAIVANKCRQLKVLDLMES-EVTDD-E---LDWISCFPEGETHLESLSFDCVE---SPI----------------------NFKA-LEELVVRS-PFLKKLRTNRFVSLE----ELHRLMVR-APQLTSLGTGSFS----------------------------------PDNVP-----QGEQQPDYAAAFRA---CKSIVCLSGFREFRPEYLLAISSVCANL-TSLNFSYA-NISPHMLK---PIISNCH-NIRVFW---------------------------------------ALDS--IRDEGLQAVAATCKELRELRIFPFDPRE----DSEGPVSGVGLQAISEGC-RKLESILYF-CQNMTNGAVTAMSENCPQLTVFRLCIMGRHRPDHVT-----GKPMDDGFGAIVKNCK-KLTRLAV---SGLL-----TDEAFSYIGEYGKLIRTLSVAF---AGNSDKALRYVLEGCPKLQK-----------------------------------------------------------------------------LEIRDSP-FGDVGLRSGMHR-YSNMRFVWLSSCL-ISRGGCRGVSHA------LPNVV----VEVFGADGDDDEDT-----------VTGDYV---------------------------ETLYLYRSL-DGPRKDAPKFVTIL------------------------------------------------------------------------------------------------------------------   [614]
'gi|51979370|ref|XP 507533.1| PREDICTED OJ1175 B01.8-1 gene product [Oryza sativa (japonica cultivar-group)] >gi|51964402|ref|XP'    -----------------------------------MRDA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEGSDSPPSEMSEDGSGGSGDGDGDGDGGGGGGDRWMPDLRGGNGGGGGGGGGGGR-WAPPDQVLE--------------NV-LESVLEFLT---AARDRNAASLVC--------RSW--YRAEAQTRRELFIGNCYA----------------VSPRRAVERFGGVRAVVLKGKPRFADFSLVPYG--W-GAYVSPWVAAL-GP--------AYPHLERI----------------------------------CLKRMTVSNDDLALIAKSFP-----------LFKELSLVCCDGFSTLGLAAIAERCRHLRVLDLIED-YIDEE-EDELVDWISKFPESNTSLESLVFDCVS---VPF----------------------NFEA-LEALVARS-PAMRRLRMNHHVTVE----QLRRLMAR-APQLTHLGTGAFR----------------------------------SEPGPG----GALSVTELATSFAA---SRSLICLSGFRDVNPEYLPAIHPVCANL-TSLNFSFA-NLTAEELT---PIIRNCV-RLRTFW---------------------------------------VLDT--VGDEGLRAVAETCSDLRELRVFPFDATE----DSEGSVSDVGLQAISEGC-RKLESILYF-CQRMTNAAVIAMSKNCSDLVTFRLCIMGRHRPDRIT-----GEPMDDGFGAIVMNCK-KLTRLSV---SGLL-----TDKAFAYIGKYGKLIKTLSVAF---AGNSDMSLQSVFEGCTRLQK-----------------------------------------------------------------------------LEVRDSP-FSDKGLLSGLSY-FYNMRFLWMNSCR-LTMRGCRDVAQQ------MPDLV----VEVMKDHLDDEGEM--------------ETV---------------------------DKLYLYRSL-AGARNDAPSFVNIL------------------------------------------------------------------------------------------------------------------   [637]
'gi|77550669|gb|ABA93466.1| Leucine Rich Repeat, putative [Oryza sativa (japonica cultivar-group)]'                                  MAKRYLIIIDNLSAASVWDILNQAFPECTQRSRIITTTRIISVALNCCLHRSEYIFEMKPLGDDCSRKLFFKGLFGSERDCPHRFKEASNKIVQICGGLPLAIIIIASLLASQPVVSMRLWIHICNSLRPDLWTDSTSDGMKQVLNLCYNNLPHYLKNCMLYLNKYPEGYKISKDALVKAWVAEGFINVTKDLGMEKVAARYFDELIGRRFIQPIEINYNDEVSSCTVHDLVRDLIAQKSADENFIVIIDGYRKNVGLIDKVRRLSVQFFYSKYTKVPSNIKRSQVRSLTFFGLLRCMPSITDFKLIRVLNLQLVGHLGENTLDLTGISVLFQLKYLKIVCDICIELPNQMRGLQLLETMDMKTKLTAVPWDVFHLPGLLHLYLLLEPNLLDWIGQMKSTITLDASSNSSQGNLNNLQDICLSCCALPSEHLQRNMETLGSLLGAVSNLKTLSIVSSSNQNVDMVSGTSDATVAWDFLTPPRFLQRFEWLLHDCIFSKIPEWIGELDNLCILNIAVRELVKNGINILRGLPALTSLSLNVHTTSIEKVIFDKGGFSVLKYLEFRCSAPWLKFESDALPNLRKLKLVFNSLFENIHGTAPISIEHLSCLEEISAKIRGGGNVEFPLTSAISNHPGNPRINFQLVDGVFYGDEDEEHATPTMGLEGRCWETVSGDSDGVGR---------CPQPNHVLE--------------NVLLESILQFLT---TARDRNMASLVC--------RYW--YHAEAETRQELFIRNCYA----------------VSPNRVIERFRGLRSITLKGRPCFADSTLVPKG--W-GAYASPWVAAL-GP--------AYPHLKCI----------------------------------FLKRMTVSDNDLRLIAQSFP-----------QLRELSLMSCDKFSATGLAIIAEQCRHLHVLDLIND-KVEDT-VDKQVDWISMFPKPSTSLESLLFSCVD---TPC----------------------NFES-LEALVARS-PGLCQLGVNRHVTVE----QLCCLMAI-APNLTHLGTGVFR----------------------------------SKTGYPAGE-APPSVSELATYFAA---CRSLHSLSGLQDANPDYLPAIYPVCANL-TSLNISSA-TLTGQQLA---PIIRSCG-NLRTFC---------------------------------------VRDS--IGDDGLSAIAETCLDLQDLRVYRLLRGS----EHHLSVSDVGLETISKGC-QKLKTLTYY-CGSMTNAAMVIMSSNCPNLEVFRLSILKTYLPDRIT-----GEPMDEGFGAIVMNCK-KLSRLST---SGLV-----TDKAFAYIGQYGKSIKTLSVAF---SGNTDMSLRYVFEGCTRLQK-----------------------------------------------------------------------------LEVRECP-FGDEGLLSGLSH-FWNMRFLWMSSCR-VTMTGCRYVAQQ------MPNLV----AEVISGHSGNED-------------VTADNV---------------------------DHLYLYRSL-AGPRDDAPSFVKIL------------------------------------------------------------------------------------------------------------------   [1261]
'gi|34902412|ref|NP 912552.1| Putative F-box containing protein TIR1 [Oryza sativa (japonica cultivar-group)] >gi|24756871|gb|AA'    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSEEDDDQPPPLPAQKRPRA--------------------SPPPDQVLD--------------NV-LETVLQFLD---SARDRCAASLVC--------RSW--SRAESATRASVAVRNLLA----------------ASPARVARRFPAARRVLLKGRPRFADFNLLPPG--WAGADFRPWAAAVAAA--------AFPALASL----------------------------------FLKRITVTDDDLDLVSRSLPA----------SFRDLSLLLCDGFSSAGLASIASHCRGLRVLDVVDC-EMNDD-DDEVVDWVAAFPPGTTDLESLSFECYV---RPV----------------------SFAA-LEALVARS-PRLTRLGVNEHVSLG----QLRRLMAN-TPRLTHLGTGAFR----------------------------------PGDGPEDVGLDIEQMASAFASAGR---TNTLVSLSGFREFEPEYLPTIAAVSGNL-TNLDFSYC-PVTPDQFL---PFIGQCH-NLERLY---------------------------------------VLDS--VRDEGLQATARTCKKLQVLHVLPLNALE----DADELVSEVGLTAIAEGC-RGLRSTLYF-CQSMTNAAVIAISQNCVDLKVFRLCIMGRHQPDHVT-----GEPMDEGFGAIVRNCS-KLTRLST---SGHL-----TDRAFEYIGKYAKSLRTLSVAF---AGDSNLALQHILQGCSKLEK-----------------------------------------------------------------------------LEIRDCP-FGDAGLLSGMHH-FYNMRFLWMSGCN-LTLQGCKEVARR------LPRLV----VELINSQPENERT---------------DSV---------------------------DILYMYRSL-EGPREDVPPFVKIL------------------------------------------------------------------------------------------------------------------   [603]
lcl|Ppa_TIR1_37_1_unnamed_protein_product                                    --------------MGWLQLRDGVQRGNSGWSSGLEIGY----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGVGNSVCDENVEFLHPGVMLEASFPFADGSVAAWGRRICKMGSWRGAKATRVDED-HFPLLQFPD--------------EI-IEKVIGFLT---NPVDRNSTSLVC--------TRL--KAIEGESRETVLISNCYA----------------IQPGTLKSRFPNAKSITIKGKPRIVDFSLIPHAEVW-GAYATPWVDLL-KE--------HYRPIRHL----------------------------------KMKRMTISDSDIKRFVSACGY----------SLERLEFEKCSGFSTTGLQYIAGACRNLVVLNLSEA-DILQGDAP---YWMTSLVNTASSLRVLDLYLT--EVEDV----------------------EQSV-LERLAKQC----HTLRLCDALKIN----HVLPVVTAACETVRHLGIGLSF-------------------------------------------QNGDSPNQIAEALGR---CKELEGISAVWDPDEVSAMMLMPVAARL-KTLDLTYAL-LEQPELT---DLLGACV-NLEDLQ----------------------------QILTIFCDCGQCTDV--IRDRGLLEVGTCCKKLRSLVVQ---------QDAAGFVTQNGLTAVAKGC-FLLEKIIIY-AADMTNEALETLATNCPNLSDIRICLVQKYDGSHPVVELEGNSTLNLGVKALLMKCP-KARRLALCFSRFGLTNVVITDEGMKHIGEYGGNLHIITLTN---CGGSNAGLEYIAKGCNELRK-----------------------------------------------------------------------------LELRHCP-FGDASMEALARG-CKSLKQLWVQACQ-VELRGVRLLA-Q------RPGLT----VEIVEESNNDG-DITP------------------------------------------WQLIAYASVA-PPRKDLPDNIDYVHEGYCKPLYCKNYLCPSTV-----------------------------------------------------------------------------------------------   [688]
'gi|72154229|gb|AAZ66745.1| coronatine-insensitive 1 [Glycine max]'                                    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTEDRNVRKTR-------VVD--------------LV-LDCVIPYID---DPKDRDAVSQVC--------RRW--YELDSLTRKHVTIALCYT----------------TTPARLRRRFPHLESLKLKGKPRAAMFNLIPED--W-GGHVTPWVKEI-SQ--------YFDCLKSL----------------------------------HFRRMIVKDSDLRNLARDRGH----------VLHSLKLDKCSGFTTDGLFHIGRFCKSLRVLFLEES-SIVEK-DG---EWLHELALNNTVLETLNFYLT--DIAVV----------------------KIQD-LELLAKNC-PNLVSVKLTDSEILD-----LVNFFKHASA-LEEFCGGTYN-----------------------------------EEP------------EKYSAISL---PAKLCRL-GLTYIGKNELPIVFMFAAVL-KKLDLLYAM-LDTEDHC---MLIQKCP-NLEVLE---------------------------------------TRNV--IGDRGLEVLGRCCKRLKRLRIERGDDDQ-GMEDEEGTVSHRGLIALSQGC-SELEYMAVY-VSDITNASLEHIGTHLKNLCDFRLVLLDHE--EKIT-----DLPLDNGVRALLRGCN-KLRRFALYLRRGGL-----TDVGLGYIGQYSPNVRWMLLGY---VGESDAGLLEFSKGCPSLQK-----------------------------------------------------------------------------LEMRGCSFFSERALAVAATQ-LTSLRYLWVQGYG-VSPSGRDLLAMA------RPFWN----IELIPSRKV-AMNTNSDETVVVEHP---------------------------------AHILAYYSLA-GQRSDFPDTVVPLDTATCVDT----------------------------------------------------------------------------------------------------------   [590]
'gi|18405209|ref|NP 565919.1| COI1 (CORONATINE INSENSITIVE 1); ubiquitin-protein ligase [Arabidopsis thaliana] >gi|22137082|gb|A'    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEDPDIKRCK-L-SCVATVD--------------DV-IEQVMTYIT---DPKDRDSASLVC--------RRW--FKIDSETREHVTMALCYT----------------ATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPEN--W-GGYVTPWVTEI-SN--------NLRQLKSV----------------------------------HFRRMIVSDLDLDRLAKARAD----------DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEES-SFSEK-DG---KWLHELAQHNTSLEVLNFYMT--EFAKI----------------------SPKD-LETIARNC-RSLVSVKVGDFEILE-----LVGFFKAAAN-LEEFCGGSLN-----------------------------------EDIGMP---------EKYMNLVF---PRKLCRL-GLSYMGPNEMPILFPFAAQI-RKLDLLYAL-LETEDHC---TLIQKCP-NLEVLE---------------------------------------TRNV--IGDRGLEVLAQYCKQLKRLRIERGADEQ-GMEDEEGLVSQRGLIALAQGC-QELEYMAVY-VSDITNESLESIGTYLKNLCDFRLVLLDRE--ERIT-----DLPLDNGVRSLLIGCK-KLRRFAFYLRQGGL-----TDLGLSYIGQYSPNVRWMLLGY---VGESDEGLMEFSRGCPNLQK-----------------------------------------------------------------------------LEMRGCC-FSERAIAAAVTK-LPSLRYLWVQGYR-ASMTGQDLMQMA------RPYWN----IELIPSRRV-PEVNQQGEIREMEHP---------------------------------AHILAYYSLA-GQRTDCPTTVRVLKEPI--------------------------------------------------------------------------------------------------------------   [592]
lcl|Smo_TIR1_9_1_unnamed_protein_product                                    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVESTRRRVPDD-SRGLLCCID--------------DV-LEKIFGYIK---KPVERNAISAVC--------KRF--HELEARTRHHVLVYNMYA----------------VNPMKLFERFPSVRSITIKGNPRLVDFDILPRD--W-AGHAGPWIAAI----------KAHPQLNRF----------------------------------RIKRMTITDSQIEELCAACGP----------NLKIMQFDKCSGFSTKGLQALAKFCKNLTHLGLAQS-MIDNTSDT---KWLKDLVNSCPALEYLDLSLI--EMGDV----------------------DEAV-LVKLAERC-KLLKLWESETQNSER-----FLPVLQKCSSNLSDLGIERIN---------------------------------------------------SNSETSLLAKCTALEGLSGIFDLVDDGMHAFMSVSSRL-TRLDLSYSN-LTEVEIA---EVLRACP-NLQYLR---------------------------------------VLDL--AGDHGLQALGNSCKDLHRLVVESPS------AIDGGVVTHAGLMAVAQGC-RNLQKLIFY-PSFITNEAFYALAYNCPNLMDVRICLIQSSSTGENMP----WECLDEGVTALVRECR-SLYRLTLCFDVQAD-VEFLTDAGVAAIGEYGKKIRVLTLVH---CGSSDMGLVPVLRGCNKLQR-----------------------------------------------------------------------------LEIRKCR-FGDESMQEIALNSELHLKHLFVQGCE-VTIDGLSSLAYR------AKHTNSRFYVEVIGCKDGRCLEEHRYSCTDESCENHHAFSLSCSH----------------------WQILAYHSLT-EPRDDTPWFIHRFDSILSEASSLPFTRAEPGGALQLMPESSSGGIDLDLSTSGIDLNEDSSEPLQLMPESSGSGGGGGSGGIDLNEPAEESCSSFPGFERKEVFHFPDILERVAAEPTLHLGAPLVL   [722]
'gi|40218005|gb|AAR82926.1| coronatine-insensitive 1 [Lycopersicon esculentum] >gi|40218003|gb|AAR82925.1| coronatine-insensitiv'    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEERNS-TRLSSSTND--------------TV-WECVIPYIQ---ESRDRDAVSLVC--------KRW--WQIDAITRKHITMALCYT----------------AKPEQLSRRFPHLESVKLKGKPRAAMFNLIPED--W-GGYVTPWVMEI-TK--------SFSKLKAL----------------------------------HFRRMIVRDSDLELLANRRGR----------VLQVLKLDKCSGFSTDGLLHISRSCKNLRTLLMEES-YIIEK-DG---EWAHELALNNTVLENLNFYMT--DLLQV----------------------RAED-LELIARNC-KSLVSMKISECEITN-----LLGFFRAAAA-LEEFGGGAFN-----------------------------------DQPELVVENGYNEHSGKYAALVF---PPRLCQL-GLTYLGRNEMSILFPIASRL-RKLDLLYAL-LDTAAHC---FLLQRCP-NLEILE---------------------------------------TRNV--VGDRGLEVLGQYCKRLKRLRIERGADDQ-EMEDEEGAVTHRGLIDLAKGC-LELEYMAVY-VSDITNEALEVIGTYLKNLSDFRLVLLDRE--ERIT-----DLPLDNGVRALLRGCH-NLRRFALYVRPGGL-----TDVGLSYVGQYSPNVRWMLLGY---VGESDHGLLEFSKGCPSLQK-----------------------------------------------------------------------------LEVRGCC-FSERALALATLQ-LKSLRYLWVQGYR-ASSAGRDLLAMA------RPFWN----IELIPARRVIANDGNNAETVVSEHP---------------------------------AHILAYYSLA-GQRTDFPDTVKPLDPTYLLAE----------------------------------------------------------------------------------------------------------   [603]
lcl|Ppa_TIR1_8_1_unnamed_protein_product                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVCVIAVNGGARNPTNFSPSVSSQSISQSVPTRKERKKEGFVVFLHLQHDVATKPR-GGEDTTVRTYTAESSWSRLYRLWKG-IICCTKAPS---LTDTFAYKSDMCVITGDSRGEQW--RRVDGMTRKFVTIANMYA----------------TSPASLTRRFKGLEGIKLKGKPRAAEYNLVRSD--W-GGYGEPWLKVL-GR--------QYADLHIL----------------------------------QLRRLTVLDSDLELIASSTFSS---------ALHVLHLHKCVGFTTKGLLPVVRACRSLRRLSLEDS-EVEDK-GG---EWLHALALNDSTLEELHFGVL--GIEAI----------------------DIED-LTILVEKS-KSLVCLKVAEIELLD-----MIDVLQRVPS-LEDLGAGSCN-------------------------------------------YLGAKDVDDFVSIPW---PKKLNALSGMWSLMDSGLPQILPIAPNL-IKLDLKYTL-LSCEGHC---LLLSHCF-SLQELQ---------------------------------------TRNT--LGDDGMETLSRSCKGLKKLRVE---------DDETGAITQRGIVAVAQGC-EQLVQLILY-VANISNAALAMVGQGCPHLVDVRIVLEPSA--RYAP-----DFPLDDGLKLMLKGCV-NLRRLAVYLRYGGL-----TDKGMEYIGVYGKNLQWLLVGC---AGNSDVGLANFAHWAQRIQR-----------------------------------------------------------------------------LEIRDCP-FGETGMAEAVSA-MSSLKYLWVQGSR-ALEAGEKLSALS------LPCLN----VEVCPPPAGQPG----------------------------------------------GQLFAYYSLA-GPRKDGPTGLKTFISNTVK---------------DQ-------------------------------------------------------------------------------------------   [648]
lcl|Ppa_TIR1_3_1_unnamed_protein_product                                    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEFERRRAPG-AGSGIPLSD--------------ET-LACVLKYVE---NWQDRAAVSLVC--------QQW--RRVDGATRKFVTISYMYS----------------TNPELLTRRFKRLEGVKIKGKPRAEEYGLLVPN--W-GGYAEPWIREL-GR--------VYRGLQTL----------------------------------LLRRCQVSDSDLELIASSPFHS---------VLQVLHLHKCAGFSTSGLLPVAKACRSLRTLSIEDS-NVNDE-GG---EWLHVLARHNTVLEVLNFAVL--GLEDV----------------------DVAD-LALLLEKC-KSLVSLKVGEIELVD-----MVGALGKSSS-LLELGAGSCN-------------------------------------------YLNDEDSRVYASISL---PLQLTSLSGLWSMGDFGLCMILPIAPNL-KKLDLKFTF-LSRKAYC---QLFSQCH-SLEELQ---------------------------------------IRNG--VGDEGLEVLGKSCKSLRRLRIE---------HDEAGAITQRGVVAVAQGC-NNLQQLVLY-VSDISNAALAMVGQGCPHLTDFRLVLTGT---QHVV-----DLPLDDGFKLLLKGCP-NISKLAVYLRHGGL-----TDKGMSYMGDFGKNLKWVLLGC---TGESDIGLANFAYKAQKLER-----------------------------------------------------------------------------LEIRDCP-FGEAGLVAAVVA-MSSLKFLWVQGYR-APEAGYQLLGLA------RPWLN----IEISLPSGTMP-----------------------------------------------GQLIAHYAIV-AARNDYPPDVKVLVEETEELEGMLPPCTNRRTVDP--------------------------------------------------------------------------------------------   [592]
'gi|37359393|gb|AAO38719.1| COI1 [Oryza sativa (japonica cultivar-group)] >gi|56784261|dbj|BAD81943.1| COI1 [Oryza sativa (japon'    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGGEVPEPRRLNRALS-FD--DWVPD--------------EA-LHLVMGHVE---DPRDREAASRVC--------RRW--HRIDALTRKHVTVAFCYA----------------ARPARLRERFPRLESLSLKGKPRAAMYGLIPDD--W-GAYAAPWIDEL-AA--------PLECLKAL----------------------------------HLRRMTVTDADIAALVRARGH----------MLQELKLDKCIGFSTDALRLVARSCRSLRTLFLEEC-HITDK-GG---EWLHELAVNNSVLVTLNFYMT--ELKVA-----------------------PAD-LELLAKNC-KSLISLKMSECDLSD-----LISFFQTANA-LQDFAGGAFY-----------------------------------EVGEL----------TKYEKVKF---PPRLCFL-GLTYMGTNEMPVIFPFSMKL-KKLDLQYTF-LTTEDHC---QIIAKCP-NLLILE---------------------------------------VRNV--IGDRGLEVVGDTCKKLRRLRIERGDDDP-GLQEEQGGVSQLGLTAVAVGC-RELEYIAAY-VSDITNGALESIGTFCKNLYDFRLVLLDRE--RQVT-----DLPLDNGVCALLRNCT-KLRRFALYLRPGGL-----SDDGLSYIGQYSGNIQYMLLGN---VGESDHGLIRFAVGCTNLQK-----------------------------------------------------------------------------LELRSCC-FSERALSLAVLQ-MPSLRYIWVQGYR-ASQTGLDLLLMA------RPFWN----IEFTPPSPESFNHMTEDGEPCVDSH---------------------------------AQVLAYYSLA-GRRSDCPQWVIPLHPA---------------------------------------------------------------------------------------------------------------   [595]
'gi|34908378|ref|NP 915536.1| P0529E05.15 [Oryza sativa (japonica cultivar-group)]'                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MPPYETARAEPASNNKQRPISGETAAGSSRSGPDPMGGEVPEPRRLNRALS-FD--DWVPD--------------EA-LHLVMGHVE---DPRDREAASRVC--------RRW--HRIDALTRKHVTVAFCYA----------------ARPARLRERFPRLESLSLKGKPRAAMYGLIPDD--W-GAYAAPWIDEL-AA--------PLECLKAL----------------------------------HLRRMTVTDADIAALVRARGH----------MLQELKLDKCIGFSTDALRLVARSCRSLRTLFLEEC-HITDK-GG---EWLHELAVNNSVLVTLNFYMT--ELKVA-----------------------PAD-LELLAKNC-KSLISLKMSECDLSD-----LISFFQTANA-LQDFAGGAFY-----------------------------------EVGEL----------TKYEKVKF---PPRLCFL-GLTYMGTNEMPVIFPFSMKL-KKLDLQYTF-LTTEDHC---QIIAKCP-NLLILE---------------------------------------VRNV--IGDRGLEVVGDTCKKLRRLRIERGDDDP-GLQEEQGGVSQLGLTAVAVGC-RELEYIAAY-VSDITNGALESIGTFCKNLYDFRLVLLDRE--RQVT-----DLPLDNGVCALLRNCT-KLRRFALYLRPGGL-----SDDGLSYIGQYSGNIQYMLLGN---VGESDHGLIRFAVGCTNLQK-----------------------------------------------------------------------------LELRSCC-FSERALSLAVLQ-MPSLRYIWVQGYR-ASQTGLDLLLMA------RPFWN----IEFTPPSPESFNHMTEDGEPCVDSH---------------------------------AQVLAYYSLA-GRRSDCPQWVIPLHPA---------------------------------------------------------------------------------------------------------------   [630]
'gi|34902000|ref|NP 912346.1| unknown protein [Oryza sativa (japonica cultivar-group)] >gi|29893584|gb|AAP06838.1| unknown prote'    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGGEAGERRLG-RAMSFGIPD--------------VA-LGLVMGFVE---DPWDRDAISLVC--------RHW--CRVDALSRKHVTVAMAYS----------------TTPDRLFRRFPCLESLKLKAKPRAAMFNLIPED--W-GGSASPWIRQL-SA--------SFHFLKAL----------------------------------HLRRMIVSDDDLDVLVRAKAH----------MLSSFKLDRCSGFSTSSLALVARTCKKLETLFLEDS-IIAEKEND---EWIRELATNNSVLETLNFFLT--DLRAS-----------------------PAY-LTLLVRNC-RRLKVLKISECFMLD-----LVDLFRTAEI-LQDFAGGSFD------------------------------------------DQGQVEESRNYENYYF---PPSLLRL-SLLYMGTKEMQVLFPYGAAL-KKLDLQFTF-LSTEDHC---QLVQRCP-NLEILE---------------------------------------VRDV--IGDRGLEVVAQTCKKLQRLRVERGDDDQGGLEDEHGMVTQVGLMAVAQGC-PHLEYWAVH-VTDITNAALEAIGTYSSSLNDFRLVLLDRE--ANIT-----ESPLDNGVRALLRGCT-KLRRFAFYVRPGAL-----SDVGLGYIGEFSKTIRYMLLGN---VGESDQGLLQLSTGCPSLQK-----------------------------------------------------------------------------LELRGCF-FSERALAVAVLQ-LKSLRYLWVQGYK-ASPNGTDLMAMV------RPFWN----IEIIAPNQD---------EVCPDGQ---------------------------------AQILAYYSLA-GMRSDYPHSVIPLYPSV--------------------------------------------------------------------------------------------------------------   [589]
lcl|Smo_TIR1_12_1_unnamed_protein_product                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGERSCCSRTRQRNSRDGDASIIDQ-VCEHPLLLE--------------SV-LSIIFGMVD---SPAERRAMSEVC--------RQW--HAMDRETRKHVYVAFVYS----------------VSPATLTRRFPNLRSLKLKAKPRAYEFDLLPHN--W-GGHVHPWLENI-GP--------AYPQLSAL----------------------------------HLRRMEVRDQDLSAVATAYAA----------SLETLKLDFCSGFSTTGLRAITGSCKCLKVLYVENS-YVSDE-GG---QWLNELALHNRVLEVLDFQLAI-GISKV----------------------NVED-VRTIIEKC-PNLTSLKLVEGEDGL---GDGLRKALASSTSLRELGIFLTA------------------------------------QEEDDQEEIDQSTSSTGQQTMRALLPRNLTSISG-----DIPLPLYTSVAAQL-LKLDLMTTTSIEAEQHH---ALLRCCT-RLQNLQ---------------------------------------VRTV--IGDEGLAIVGECCKDLRKARIEDH-------NDEGTSVSHTGLMALARGC-SKLEKLAIY-VADMSNQALAAVGSGCPDLRDFRLILTEANDLSSMT-----ELPLDAGFDELMRGCH-RLSRLCIYVRPGAL-----SDHGLVRIGHRGANLKALLLGC---CGDSDAGFLAIARGCKRLQR-----------------------------------------------------------------------------LEIRDCP-FTDDGLLRGVGC-MEDLKLMWIQGFR-MDDYGKLDVLGG------EKYRN----VECTRRDP--------------------------------------------------IQCLIYRSLA-GPRLDCPEEVVSPQGNGMLRHNWLTPSGGLVVG----------------------------------------------------------------------------------------------   [616]
lcl|Ppa_TIR1_2_1_unnamed_protein_product                                    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEMGREKRP--SGSGTGLSD--------------ET-LACVLKYVE---SAEDRASVSLVC--------KQW--RLVDGATRKFVTIAYMYS----------------TSPEMLTRRFKRLEGLKLKGKPRAAEYDLLVPD--W-GGYAEPWIRDL-GR--------AYTSLQTL----------------------------------QLRRCQVSNADLTLIASSPCQA---------SLQVLYLHKCAGFSTAGLLPVAKSCRSLKSLSVEDS-DVTDE-GG---EWLFELARNNSVLEVLNFAVL--GLEDV----------------------DAAD-LVLLVERC-KSLVSLKVGEVEMVD-----MISAISRASS-LTEFGTGSCN-------------------------------------------FFGDEDSRTHVSISL---PSSLTGLS----------------APNL-RKLDLKFTL-LSRKAYC---QLFSQCH-ALEELQ---------------------------------------VRNA--VGDEGMEVIGKTCKSLRRLRVE---------HDNAGAITQRGVVAVAQGC-ARMQQLIVY-VSDITNAALAMLGQCCAQLTDFRLVLETAA--RRVV-----DLPLDDGIKLLLKGCR-KISKLAVYLRHGGL-----TDRGMGYIGEFGTNLKWLLLGC---TGESDIGLASLAYKAQRIER-----------------------------------------------------------------------------LECRDCP-FGEAGLAAAVVA-MSSLKFIWIQGYR-APWAGEHLLALS------RPYLN----IEVISSTDTQP-----------------------------------------------GQLIAHYTTV-GPRTDNPLEVKQLTLNPDDHLQEMRPSLHSPGSTRH-------------------------------------------------------------------------------------------   [577]
'gi|53749250|gb|AAU90110.1| putative LRR-containing F-box protein [Oryza sativa (japonica cultivar-group)]'                          -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGGEAPEARRLDRAMS-FGGAGSIPE--------------EA-LHLVLGYVD---DPRDREAVSLVC--------RRW--HRIDALTRKHVTVPFCYA----------------ASPAHLLARFPRLESLAVKGKPRAAMYGLIPED--W-GAYARPWVAEL-AA--------PLECLKAL----------------------------------HLRRMVVTDDDLAALVRARGH----------MLQELKLDKCSGFSTDALRLVARSCRSLRTLFLEEC-SIADN-GT---EWLHDLAVNNPVLETLNFHMT--ELTVV-----------------------PAD-LELLAKKC-KSLISLKISDCDFSD-----LIGFFRMAAS-LQEFAGGAFI-----------------------------------EQGEL----------TKYGNVKF---PSRLCSL-GLTYMGTNEMPIIFPFSALL-KKLDLQYTF-LTTEDHC---QLIAKCP-NLLVLA---------------------------------------VRNV--IGDRGLGVVADTCKKLQRLRVERGDDDP-GLQEEQGGVSQVGLTTVAVGC-RELEYIAAY-VSDITNGALESIGTFCKNLCDFRLVLLDRE--ERIT-----DLPLDNGVRALLRGCT-KLRRFALYLRPGGL-----SDTGLGYIGQYSGIIQYMLLGN---VGETDDGLIRFALGCENLRK-----------------------------------------------------------------------------LELRSCC-FSEQALARAIRS-MPSLRYVWVQGYK-ASKTGHDLMLMA------RPFWN----IEFTPPSSENANRMREDGEPCVDSQ---------------------------------AQILAYYSLA-GKRSDCPRSVVPLYPA---------------------------------------------------------------------------------------------------------------   [597]
lcl|Ppa_TIR1_9_1_unnamed_protein_product                                    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAAEVVWRED---GNIRSRFFRGNEHGPTK-KCIFNQLPE--------------SV-IELIFDRLG---SKGDRRAISQVC--------KQW--HRVDGLTRKNIYIFNCYS----------------IAPSNLSKRFPNLEKIKIKGKPRAYEFGLLVES--W-GAHAGPWIEEI-AS--------VYPNLEGL----------------------------------ALRRMDITDKDLMLLASRCP-----------NLRKLKLHKCSGFSTRGLEFITRSCRTLRVLDIDESHDMEDT-GG---PWLQLLEKGDGKLESLNIASA--GLEEE----------------------SIKEVLLKLAPSL-KCISSLRVSDMELGS-----FFKILDNSEVPVVELGLGCYS--------------------------------------------------------LSQEDPKEL-------------VPSFSSRLSKL-KILDLKFTT-LNAEIQI---ELLRHCC-SVEELE---------------------------------------LRSV--VGDWGMQVISENCKQLKKIRVDQDTS-----PYMTNHVTQKGMISICEGC-RELDFLVMY-LTDVNNAALAAVGQYLPKLSDFRIVLLEDQ--DDVE-----DLPLDDGIRLLLQGCP-MLSRFSVYLRPGGL-----SNKGLGYIGEFGSKLKWVLLGS---SGESDEGFRLMAEGCRQLER-----------------------------------------------------------------------------LELRNCP-FSDKQLAISILNNLPHLKYLWVQGFG-ATSGLGVALVTQ------MPGFV----VEVMATD---------------------------------------------------QQILGYYTVT-HPRTDSPDSVCVINYDPLLDNSAEVCE------EGSQGDACSYYAERLYSEHIYSYLR---VDEEAPYPGVNKNSHLPKIDENTLYSGVVGLEMYLAGDDNSASSEFCEDSACIC------------   [660]
lcl|Ppa_TIR1_5_1_unnamed_protein_product                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MANLGRRRRSTVESE-HCSLLQCPD--------------EI-LEKIVDLIS---DTADRSAISLVC--------KSL--KVLEGHTRGVVLVSNCYA----------------IQPLTLKDRFPNAWSITIKGKPRIVDFALIPHAEVW-GAYATPWMEIL-VN--------FDRPIRHL----------------------------------RMKRMTVSDSDIQLLVSRCGE----------GLQRLELEKCSGFSTFGLEIIARACRNLIELNISES-EIQNGGHR---SWLTTLVNTAKSLQVLDLSLT--DVEHV----------------------EQSV-LEKLAGQC----HTLKLSAALEIE----RVLPVVEAANHSMRHLGTRFYS-------------------------------------------QNIENPHQIAEAFGR---CRVLEGISAPLDLDEGSMMM----------------------------------------------------------------------------------CTDV--IGDRGLRVIGTHCQKLRRLVVQ---------QDAQGFVTQHGLTAVANGC-FLLEKIIIY-AADMTNAALETLANNCPGLSDIRICLVQKYHPSHPVIELEGNSTLNLGVRALLMRCR-RARRLALCFSRFGLSNVVITDEGIRYIGEYGGNLHIITLTN---CGSSDAGLESIAKGCTNLRR-----------------------------------------------------------------------------FELRHCP-FGDRSMEFLATS-CHSLKQLWVQACQ-VELNGVRVLA-R------RKDLV----VEVVKESTNENGDPIP------------------------------------------WQFIAYASVA-SPRNDRPENIDYVHSQYDTPLRSEYFMCPSTGAELIDDLEDGLQNV---------------------------------------------------------------------------------   [589]
lcl|Smo_TIR1_21_2_unnamed_protein_product                                    MASMKISRRWIHAD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDP-DSINSRLPD--------------DL-LKIIFSRLG---DNQDHASVARVC--------RQW--RDAESATREKITVNFSYA----------------VSPGYVIDRFGQLRALKIKGKPRASDFGLIPVD--W-GGYGGPWIAAL-AL---ARARSLYGALASL----------------------------------HFKRMEISDEDLALLAETFRD----------ALQVLKLEKCSGFSSLGLESIARSCRDLRVLSLDES-DIEDKGS----QWLRELIHSCASLEALNLSMT--GLELG----------------------DIRL-VEEIVSSS--KLKSLKLNDLEDPS-----RNRRLDLRQSSLQELGFCGLI---------------------------------------------------------QVSLPSSLSSFSG-----DLQLAMEPNLASAL-TSLDLLYTT-ANHEQHL---EIIKGCR-NLQVFK-----------------------ASFLPGMDFLALVLAMARDI--IGDVGLELLASHCKGLQRIRIENMRQQ----EQHGFSISNSGMLALAKSC-VHLQSFSMY-VHDAANSSLEAFAESCPGLLDFRLGILETAPDM--------AEPLDAGVQSLLQRCP-SITKLALYLKEGGL-----TDRGLESIGRLGQQLKWILLGCLSDSDTSDRGLVSLARGCSNLRK-----------------------------------------------------------------------------LEVRNCP-FSDAAIVCGIRG-LPLLRYLWFQCYHRVSDRHFALL---------GPEWR----TELMPEF---------------------------------------------------YSVLCYRALVSGSRSDHPPSVRPMLGGGAGGG----------------------------------------------------------------------------------------------------------   [592]
lcl|Smo_TIR1_10_1_unnamed_protein_product                                    ?ISMALLSAPAPAPSPLLPRFFFIQMPYYESPNLHREKI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RFLSSFCCLDPSLSSNKKRMVHRKGEKKMAFISQELEAVTFTINHSLPHSRFHSAN-PSPMEWMSD--------------EL-LDSIFSFID---HPMDRRALSEVC--------KRW--YLADARTRKSITVGFSYA----------------IEPSNLSRRFGNIQALKIKGKPRVSEFGMVVKD--W-GAYCEPWIQEL-VSQRHPSSATAFASLTSL----------------------------------HFRRMEVSDTALRLLARGFGC----------SLQVLRLDKCSGFSTAGLEAVARECKSLRVLYLEES-VIEDD-GS---QWLHELAVSNSALEVLNFFLT--GLDLS----------------------NLSD-LAHIIANC-KSLTSLKLGEISTGV--VDLPADIFIAAKS-LKELAV---------------------------------------------------IFARNNISVNL---PKTLTSFAG-----DLLFPLDPHVCSNF-RELDLMSTT-LSAEEHM---QVIQCCP-NLEVLKVENPLLVVKKYLIFVFFFCFPKVRSESSQSLMCLFAVEQVRNI--IGDAGVATLASLCPKLRRIRIENL-------EDAHGFCSYNGLISLASRC-VNLQHVAIY-VSDIANSALRAFGTHCPHMLDFRIVLLEST--LPVT-----ELPLDSGVRALLQGCR-KITRLAIYLRNGGL-----TDAGLAAIGSLGEHLTWLLLGC---VGSTDQGLIDLASGCRSLQK-----------------------------------------------------------------------------LELRDCP-FTERGIAVSVRL-LASLRFLWIQKYR-ESNPYDLLQ---------MGDWV----VEYIVPSSDTTP----------------------------------------------SQVVAYRSTV-GHRSDFPEEVIPLSQIAWAFGGEFHI-----------------------------------------------------------------------------------------------------   [705]
lcl|Ppa_TIR1_7_1_unnamed_protein_product                                    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSEVASWGDSPQLSNKKGKNRLANESTPST-ECKFNLLPE--------------PI-IESIFNRVE---ARGDRNAMSQVC--------KLW--QKMDGMTRKNIYISNCYS----------------IAPSDVSRRFKSLQKIKIKGKPRAYEFGLLVER--W-GGHAGPWIGEM-SR--------AYPELLGL----------------------------------SMRRMDVTDNDLRILASRCP-----------KLQKLKLHKCCGFSTGGLEHITRSCRTLRVLDIEESDDIEDT-GG---PWLELLENSDGRLESLNIASA--GLEEE----------------------NIKEVLPVVGRSL-KCISSLKVSDMELGS-----FFKILDNSNVPVVELGLGCYC--------------------------------------------------------SSPEDPKEL-------------ASSFALRLSKV-KVLDLKFAT-LNAEIQI---ELLRHCS-SLEELE--------------------------HDSDVECTWCDEQLRSA--VGDRGMQVIGETCKQLKRIRVDQDTS-----EYMTDYITQKGMIAICEGC-RELDFLVMY-LSDVNNEALAAVGRCLPKLTDFRIVLLEVR--NDVK-----DLPLDEGVRLLLQGCP-ILTRFSVYLRQGGL-----SDKGVGYIGQFGTKLKWVLLGC---SGETDKGLRLMAEGCRQLER-----------------------------------------------------------------------------LELRCCP-FTELQLASSILNSWRHLKYLWVQGVG-ATSGLGVDLVTH------KSGFL----VEFMGET---------------------------------------------------QQILGYYSAT-RPRTDNPRSVCLINYVPPEDRPEADAKGFQGNTHASQGDAHSFYSD--YAD---GYVRNSCSEAEAFYPGFNENNLYPDADENAFYTGVVDAGLYLGVGDSCGYPEFGEDEAFIY------------   [680]
lcl|Smo_TIR1_6_1_unnamed_protein_product                                    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEERSSNKKKK-KSAVLWLCD--------------EL-LERILALIA---DPCDRAAVSEVN--------RQW--YRVEARTRSRLVVKCSYA----------------VHPWRLAQRFTGLASVTIKGRPRIYDWGLLGDD--W-GGTADAWIRVL-VA--------CCPSLAAI----------------------------------HLRRFDVPDSAIAAIATAAFAS---------SLQVLKLDRCSGFSTRGLLEIARHCKNLRVLSLDES-IVDGG-GE---QWLRALADTATKLEVLSFSLT--GIEVR----------------------GLDD-VAAIVSRN-KRLASLRLDEVRTTNDAISRARGILRDAAS-LQEMLLLYRS----------------------------------------------VDESSIIEKLEL---PKTVTSLAG-----DISIPLDCGLASRL-LKLDLMLTT-LDSSQLSLLHQTFQACP-NLEELK---------------------------------------VRNS--IGDEGVEAIAKHCRKLKRIRIENL-------EDNHHSVSQRGLITLASSC-PHLRTVAIY-ASDVSNAAFAAFGHCCRDLYDFRIAVLDSP--TPLT-----DTPLDAGVKSLLQGCR-GLRKLALYLKRGGL-----SDHGLAEMGVLAGNLKWLLLGC---AGYSDAGFVGLAAGCARLTK-----------------------------------------------------------------------------LELRHCP-FSEAGMAAGVAR-MERLRYVWSQGYR-EVDA--RELLAL------GPAWN----IEYMPSRDAAV-----------------------------------------------TQFVAYRSLL-GPRMDCPPRVMQLVG----------------------------------------------------------------------------------------------------------------   [574]
lcl|Smo_TIR1_11_1_unnamed_protein_product                                    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLVVSSWAIVVTKEFFIVDSGLQRCKVLAMEERSNNKKKK-KSTVLWLCD--------------EL-LERILALIA---DPCDRAAVSEVN--------RQW--YRVEARTRSRLVVKCSYA----------------VHPWRLAQRFTGLASVTIKGRPRIYDWGLLGDD--W-GGAADTWIRVL-VA--------CCPSLAAI----------------------------------HLRRFDVPDSAIAAIATAAFAS---------SLQVLKLDRCSGFSTRGLLEIARHCKNLRVLSLDES-IVDGG-GE---QWLRALADTATKLEVLSFSLT--GIEVR----------------------GLDD-VAAIVSRN-KRLASLRLDEVRTTNDAISRARGILCDAAS-LQEMLLLYRS----------------------------------------------LDESSIIEKLEL---PKTVTSLAG-----DISIPLDSGLAFRL-LKLDLMLTT-LDSSQLSLLHQTFQACP-NLEELK---------------------------------------VRNS--IGDEGVEAIAKHCRKLKRIRIENL-------EDNHHSVSQHGLIALASSC-AHLRTVAIY-ASDVSNAAFAAFGICCRDLYDFRIAVLDSP--TPLT-----DTPLDAGVKSLLQGCR-GLRKLALYLKRGGL-----SDHGLAEMGVLAANLKWLLLGC---AGYSDAGFVGLAAGCARLTK-----------------------------------------------------------------------------LELRHCP-FSEAGMAAGVAR-MERLRYVWSQGYR-EVDA--RDLLAL------GPAWN----IEYMPSRDAAV-----------------------------------------------TQFVAYRSLL-GPRRDCPPRVMQLVG----------------------------------------------------------------------------------------------------------------   [603]
lcl|Smo_TIR1_2_1_unnamed_protein_product                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGERSCCSRTRQRNSRDGDASIIDQ-VCEHPLLLE--------------SV-LSIIFGMVD---SPAERRAMSEVC--------RQW--HAMDRETRKHVYVAFVYS----------------VSPATLTRRFPNLRSLKLKAKPRAYEFDLLPHN--W-GGHVHPWLENI-GP--------AYPQLSAL----------------------------------HLRRMEVRDQDLSAVATAYAA----------SLETLKLDFCSGFSTTGLRAITGSCKCLKVLYVENS-YVSDE-GG---QWLNELALHNRVLEVLDFQLAI-GISKV----------------------NVED-VRTIIEKC-QNL?----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [240]
lcl|Smo_TIR1_3_1_unnamed_protein_product                                    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVESTRRRVPDD-SRGLLCCID--------------DV-LEKIFGYIK---KPVERNAISAVC--------KRF--HELEARTRHHVLVYNMYA----------------VNPMKLFERFPSVRSITIKGNPRLVDFDILPRD--W-AGHAGPWIAAI----------KAHPQLNRF----------------------------------RIKRMTITDSQIEELCAACGP----------NLKIMQFDKCSGFSTQGLQALAKFC?----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [166]
lcl|Smo_TIR1_4_1_unnamed_protein_product                                    MASMKISRRWIHAD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDP-DSINSRLPD--------------DL-LKIIFSRLG---DDQDHASVARVC--------RQW--RDAESATREKITVNFSYA----------------VSPGYVIDRFGQLRALKIKGKPRASDFGLIPVD--W-GGYGGPWIAAL-AL---ARARSLFGALASL----------------------------------HFKRMEISDEDLALLAETFRD----------ALQVLKLEKCSGFTSLGLESIARSCRYVRN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PRSMDE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [187]
lcl|Smo_TIR1_8_1_unnamed_protein_product                                    ?ISMALLSAPAPAPSPLLPRFFFIPMPYYESPNLHREKI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RFLSSFSCLDPSLSSNKKRMVHRKGEKKMAFISQELEAVAFTI----------AAN-PSPMEWMSD--------------EL-LDSIFSFID---HPMDRRALSEVC--------KRW--YLADARTRKSITIGFSYA----------------IEPSSLSRRFGNIQALKIKGKPRVSEFGMVVKD--W-GAYCEPWIQEL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [183]
lcl|Smo_TIR1_17_1_unnamed_protein_product                                    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKGH-DLLNDVLPD--------------EA-LIHILSYLD---VPSDRGSCSLVC--------KRW--WQLESETRHSIRIGASGN--------------PDACVTAVVRRFTGLRDDAEKGQRRSEFFP-------WRFSKFGFSLIQNGDATSRRGRKRRRGADELS------------------------------PLLTESLWSSLSDSGLMLLGQGCP-----------RLEKLTLVWCSAISSTGFKSLAENCCGLKNLELQGC-YVGDD-------GLKAIGQFCK-LEDLNLRFCDGVTDLG---------------------------LMAIATGCAKSLKALIISVCPRVT-----------------------------------------------------------------------------------------------------DATLAAVGKNCSLL-ERLTLDSEG-FKSDGVQ---AVARGCP-RLKYLR---------------------------------------MLCV-NVEDEALDSVGRYCRSLETLALH-----------SFQKF-DKGFLAIGHGC-KQLTSLTLSDCYFLTDTTLAAIASGCTELSSLEINGC--------------HNISTSGVRAVGRSCR-KLTEVVL-KYCQKI-----GDDGLSEIGRGCKLLQALILVDC--SAIGDSSIRSIAGGCPGLKR-----------------------------------------------------------------------------LHIRRCYKIGDKAIVAVGQH-CERLTDLSMRFCD?-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [463]
lcl|Smo_TIR1_51_1_unnamed_protein_product                                    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MADRKMSKNSG-DSVIDLLDD--------------NI-LLQILERLE---DRFDRQAWCLSC--------KHF--LRLEASTRNRIQLMRHEV------------------LEGILHRYTRLEHLDLSHCIQLVDENLA-----LVGQIAGNRLASINLSRVGGFTSAGLGLLARSCCASLTDVDLSYCSNLKDSDVLALAQISNLQALRLTGCHSITDIGLGCLAAGCK-----------MLKLLTLKGCLGITDIGIALVAVNCKQLRTLDLSYT-EVTDE-------GLASIATL-HSLEVLNLVSCNNVDDGG---------------------------LRSLKRSC-RSLLKLDVSRCSNVS-----------------------------------------------------------------------------------------------------DAGLAALATSHLSL-EQLTLSYCS---------------IFD-HLQSIV---------------------------------------LDGC-EIARNGLPFIARGCKQLKELSLS-----------KCRGVTDRGIAAVAQGC-TALHKLNLTCCRELTDASLCRISKDCKGLESLKMESC--------------SLITEDGLCGLGEGCP-RLEELDF-TEC-NM-----SDTGLKYISK-CTALRSLKLGFC--STITDKGVAHIGARCCNLRELDFY----------------------------SKITDCSLQSLSQLRELQRVELRGCVLVSSTGLAVMASGCKRLTEIDIKRCSQIGNAGVSALSFF-CPGLRMMNISYCP-ISNAGLLSL-PR------LSCLQSVRLVHLKNVTVDCFVTVLQN-CKSLKNVKLPS-YLRTLLPPGIAEEMESRGCRIRWMDKALEEDDVLEPH---------------------------------------------------------------------------------------------------------------------------------   [618]
'gi|77552216|gb|ABA95013.1| F-box protein family, AtFBL4 [Oryza sativa (japonica cultivar-group)]'                                   -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRGA-DLINLLLPD--------------EI-LDEVLRRVAVSGAKRDLDACALVC--------RRW--RRHDRATRRSAKLAASGA-------------RADEVLRLVAERFPALVEVSVDERISVEAAAAGPSCAAARSRRRPMYDVSPSGRRRRMSRSSNFGAHMSP------------------------FPLDQPGSDNETERTCLTDVGLTSLARGCK-----------GLEKLSLVWCSSITSTGLVRISENCKNLSSLDLQAC-YIGDP-------GLIAIGEGCKLLRNLNLRFVEGTSDEG---------------------------LIGLIKNCGQSLVSLGVATCAWMT-----------------------------------------------------------------------------------------------------DASLHAVGSHCPNL-EFLSLESDH-IKNEGVV---SVAKGCR-LLKTLK---------------------------------------LQCM-GAGDEALDAIGLFCSFLESLSLN-----------NFEKFTDRSLSSIAKGC-KNLTDLILNDCHLLTDRSLEFVARSCKKLARLKINGC--------------QNMETAALEHIGRWCP-GLLELSL-IYCPRI-----QDSAFLEVGRGCSLLRSLYLVDC--SRISDDALCYIAQGCKNLTELSIRRGYEIGDKALISFAENCKSLRELTLQFCERVSDAGLTAIAEGCPLRKLNLCGCQLITDNGLTAIARGCPDLVYLDISVLRSIGDMALAEIGEG-CSQLKDIALSHCPEVTDVGLGHLVRG------CLPLQSCQMVYCRRVSSTGIATIVSG-CPKLKKLLVEEWKVSERTRRRAGSVLSFLCTGL-------------------------------------------------------------------------------------------------------------------------------------------------   [630]
lcl|Smo_TIR1_35_1_unnamed_protein_product                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRLEADIWSLSN--------------HL-LVKILEKLD---EVVDRKSWRLTC--------KRF--YAAGAESQKTMRLFNSEL------------------LPRALARHTGIESLDLSSCIKITDEDLA-----LVGELAGTRLRSLGLARMGGFTVAGIVALARD-CSALVELDLRCCNSLGDLELAAVCQLGNLRKLDLTGCYMISDAGLGCLAAGCK-----------KLQVVVLKGCVGISDAGLCFLASNCKELTTIDVSYT-EITDD-------GVRCLSNL-PSLRVLNLAACSNVGDAG------------------------------LTRTS-TSLLELDLSCCRSVT-----------------------------------------------------------------------------------------------------NVGISFLSKRSL---QFLKLGFCS-PITGQLL---EAVGKLT-QIQTLK---------------------------------------LAGC-EIAGDGLRFVGSCCLQLSDLSLS-----------KCRGVTDSGMASIFHGC-KNLRKLDLTCCLDLTEITAYNIARSSAGLVSLKIEAC--------------RILTENNIPLLMERCS-CLEELDV-TDC-NI-----DDAGLECIAK-CKFLKTLKLGFC---KVSDNGIEHVGRNCSDLIELDLYRSGNVGDAGVASIAAGCRKLRILNLSYCPNITDASIVSISQLSHLQQLEIRGCKRV---GLEKKLPEFKNLVELDLKHCG-IGDRGMTSIVYC-FPNLQQLNLSYCR-ISNAGLVML-GN------LRCLQNVKLVQIGDVSIEVLAAALLS-CVCLKKAKLFCNALLNDSINARYQQLEDRGCRIRWMIKPER-----------------------------------------------------------------------------------------------------------------------------------------   [631]
lcl|Smo_TIR1_33_1_unnamed_protein_product                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRLEADIWSLNN--------------HL-LVKILEKLD---EVVDRKSWRLTC--------KRF--YAAGAESQKTMRLFNSEL------------------LPRALARHTGIESLDLSSCIKITDEDLA-----LVGELAGTRLRSLGLARMGGFTVAGIVALARN-CSALVELDLRCCNSLGDLELAAVCQLGSLRKLDLTGCYMISDAGLGCLAAGCK-----------KLQVVVLKGCVGISDAGLCFLASNCKELTTIDVSYT-EITDD-------GVRCLSNL-PSLRVLNLAACSNVGDAG------------------------------LTRTS-TSLLELDLSCCRSVT-----------------------------------------------------------------------------------------------------NVGISFLSKRSL---QFLKLGFCS-PITGQLL---EAVGKLT-QIQTLK---------------------------------------LAGC-EIAGDGLRFVGSCCLQLSDLSLS-----------KCRGVTDSGMASIFHGC-KNLRKLDLTCCLDLTEITACNIARSSAGLVSLKIEAC--------------RILTENNIPLLMERCS-CLEELDV-TDC-NI-----DDAGLECIAK-CKFLKTLKLGFC---KVSDNGIEHVGRNCSDLIELDLYRSGNVGDAGVASIAAGCRKLRILNLSYCPNITDASIVSISQLSHLQQLEIRGCKGV---GLEKKLPEFKNLVELDLKHCG-IGDRGMTSIVHC-FPNLQQLNLSYCR-ISNAALVML-GN------LRCLQN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [570]
'gi|77548336|gb|ABA91133.1| F-box family protein AtFBL3, putative [Oryza sativa (japonica cultivar-group)]'                          ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MASPMPTPTHRVKRRRLDL--SP-PPHLNDLAD--------------EL-LFLILDRAA-AHDPRALKSFSLVS--------RAC--HAAESRHRRVLRPFRPDL------------------LPAALARYPALSRLDLSLCPRLPDAALA-------ALPAAPSVSAVDLSRSRGFGAAGLAALVAA-CPNLTDLDLSNGLDLGDAAAAEVAKARRLQRLSLSRCKRITDMGLGCIAVGCP-----------DLRELSLKWCIGVTHLGLDLLALKCNKLNILDLSYT-MIVKK-------CFPAIMKL-QSLQVLLLVGCNGIDDDA---------------------------LTSLDQECSKSLQVLDMSNYYNVT-----------------------------------------------------------------------------------------------------HVGVLSIVKAMPNL-LELNLSYCS-PVTPSMS---SSFEMIH-KLQTLK---------------------------------------LDGC-QFMDDGLKSIGKSCVSLRELSLS-----------KCSGVTDTDLSFVVPRL-KNLLKLDVTCCRKITDVSLAAITTSCPSLISLRMESC--------------SLVSSKGLQLIGRRCT-HLEELDL-TDT-DL-----DDEGLKALSG-CSKLSSLKIGIC--LRITDEGLRHVSKSCPDLRDIDLYRSGAISDEGVTHIAQGCPMLESINLSYCTKLTDCSLRSLSKCIKLNTLEIRGCPMVSSAGLSEIATGCRLLSKLDIKKCFEINDMGMIFLSQF-SHNLRQINLSYCS-VTDIGLISL-SS------ICGLQNMTIVHLAGVTPNGLIAALMV-CG-LRKVKLHE-AFKSMVPSHMLKVVEARGCLFQWINKPYQVAVEPCDVWKQQSQDLLVQ----------------------------------------------------------------------------------------------------------------------   [677]
'gi|30679379|ref|NP 568094.2| ubiquitin-protein ligase [Arabidopsis thaliana] >gi|21689699|gb|AAM67471.1| putative F-box family'     ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKKVKQIRV-LKPFDLLSE--------------EL-VFIILDLIS--PNPSDLKSFSLTC--------KSF--YQLESKHRGSLKPLRSDY------------------LPRILTRYRNTTDLDLTFCPRVTDYALS-----VVGCLSGPTLRSLDLSRSGSFSAAGLLRLALK-CVNLVEIDLSNATEMRDADAAVVAEARSLERLKLGRCKMLTDMGIGCIAVGCK-----------KLNTVSLKWCVGVGDLGVGLLAVKCKDIRTLDLSYL-PITGK-------CLHDILKL-QHLEELLLEGCFGVDDDS---------------------------LKSLRHDC-KSLKKLDASSCQNLT-----------------------------------------------------------------------------------------------------HRGLTSLLSGAGYL-QRLDLSHCSSVISLDFA---SSLKKVS-ALQSIR---------------------------------------LDGC-SVTPDGLKAIGTLCNSLKEVSLS-----------KCVSVTDEGLSSLVMKL-KDLRKLDITCCRKLSRVSITQIANSCPLLVSLKMESC--------------SLVSREAFWLIGQKCR-LLEELDL-TDN-EI-----DDEGLKSISS-CLSLSSLKLGIC--LNITDKGLSYIGMGCSNLRELDLYRSVGITDVGISTIAQGCIHLETINISYCQDITDKSLVSLSKCSLLQTFESRGCPNITSQGLAAIAVRCKRLAKVDLKKCPSINDAGLLALAHF-SQNLKQINVSDTA-VTEVGLLSL-AN------IGCLQNIAVVNSSGLRPSGVAAALLG-CGGLRKAKLHA-SLRSLLPLSLIHHLEARGCAFLWKDNTLQAELDPKYWKQQLEEMAP------------------------------------------------------------------------------------------------------------------------   [665]
'gi|77553392|gb|ABA96188.1| F-box family protein AtFBL3, putative [Oryza sativa (japonica cultivar-group)]'                          ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAS--PAPTHHAKRRRLALPPPP-PPHLNDLAD--------------EL-LFLILDRAA-AHDPRALKSFSLVS--------RAC--HAAESRHRRVLRPFRPDL------------------LPAALARYPAISHLDLSLCPRLPDAALA-------ALPAAPFVSAVDLSRSRGFGAAGLAALVAA-FPNLTDLDLSNGLDLGDAAAAEVAKARRLQRLSLSRCKRITDMGLGCIAVGCP-----------DLRELSLKWCIGVTHLGLDLLALKCNKLNILDLSYT-MIVKK-------CFPAIMKL-QNLQVLLLVGCNGIDDDA---------------------------LTSLDQECSKSLQVLDMSNSYNVT-----------------------------------------------------------------------------------------------------HVGVLSIVKAMPNL-LELNLSYCS-PVTPSMS---SSFEMIH-KLQKLK---------------------------------------LDGC-QFMDDGLKSIGKSCVSLRELSLS-----------KCSGVTDTDLSFVVPRL-KNLLKLDVTCCRKITDVSLAAITTSCPSLISLRMESC--------------SLVSSKGLQLIGRRCT-HLEELDL-TDT-DL-----DDEGLKALSG-CSKLSSLKIGIC--LRITDEGLRHVSKSCPDLRDIDLYRSGAISDEGVTHIAQGCPMLESINMSYCTKLTDCSLRSLSKCIKLNTLEIRGCPMVSSAGLSEIATGCRLLSKLDIKKCFEINDMGMIFLSQF-SHNLRQINLSYCS-VTDIGLISL-SS------ICGLQNMTIVHLAGVTPNGLIAALMV-CG-LRKVKLHE-AFKSMVPSHMLKVVEARGCLFQWINKPYQVLLYFFSGYTK------------------------------------------------------------------------------------------------------------------------------   [669]
'gi|77553393|gb|ABA96189.1| F-box family protein AtFBL3, putative [Oryza sativa (japonica cultivar-group)]'                          ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAS--PAPTHHAKRRRLALPPPP-PPHLNDLAD--------------EL-LFLILDRAA-AHDPRALKSFSLVS--------RAC--HAAESRHRRVLRPFRPDL------------------LPAALARYPAISHLDLSLCPRLPDAALA-------ALPAAPFVSAVDLSRSRGFGAAGLAALVAA-FPNLTDLDLSNGLDLGDAAAAEVAKARRLQRLSLSRCKRITDMGLGCIAVGCP-----------DLRELSLKWCIGVTHLGLDLLALKCNKLNILDLSYT-MIVKK-------CFPAIMKL-QNLQVLLLVGCNGIDDDA---------------------------LTSLDQECSKSLQVLDMSNSYNVT-----------------------------------------------------------------------------------------------------HVGVLSIVKAMPNL-LELNLSYCS-PVTPSMS---SSFEMIH-KLQKLK---------------------------------------LDGC-QFMDDGLKSIGKSCVSLRELSLS-----------KCSGVTDTDLSFVVPRL-KNLLKLDVTCCRKITDVSLAAITTSCPSLISLRMESC--------------SLVSSKGLQLIGRRCT-HLEELDL-TDT-DL-----DDEGLKALSG-CSKLSSLKIGIC--LRITDEGLRHVSKSCPDLRDIDLYRSGAISDEGVTHIAQGCPMLESINMSYCTKLTDCSLRSLSKCIKLNTLEIRGCPMVSSAGLSEIATGCRLLSKLDIKKCFEINDMGMIFLSQF-SHNLRQINLSYCS-VTDIGLISL-SS------ICGLQNMTIVHLAGVTPNGLIAALMV-CG-LRKVKLHE-AFKSMVPSHMLKVVEARGCLFQWINKPYQVAVEPCDVWKQQSQDLLVQ----------------------------------------------------------------------------------------------------------------------   [677]
'gi|18421172|ref|NP 568502.1| ubiquitin-protein ligase [Arabidopsis thaliana] >gi|29028992|gb|AAO64875.1| At5g27920 [Arabidopsis'    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSTS-PSILSVLSE--------------DL-LVRVYECLD----PPCRKTWRLIS--------KDF--LRVDSLTRTTIRILRVEF------------------LPTLLFKYPNLSSLDLSVCPKLDDDVVLRLA--LDGAISTLGIKSLNLSRSTAVRARGLETLARM-CHALERVDVSHCWGFGDREAAALSSATGLRELKMDKCLSLSDVGLARIVVGCS-----------NLNKISLKWCMEISDLGIDLLCKICKGLKSLDVSYL-KITND-------SIRSIALL-VKLEVLDMVSCPLIDDGG---------------------------LQFLENGS-PSLQEVDVTRCDRVS-----------------------------------------------------------------------------------------------------LSGLISIVRGHPDI-QLLKASHCVSEVSGSFL---KYIKGLK-HLKTIW---------------------------------------IDGA-HVSDSSLVSLSSSCRSLMEIGLS-----------RCVDVTDIGMISLARNC-LNLKTLNLACCGFVTDVAISAVAQSCRNLGTLKLESC--------------HLITEKGLQSLGCYSM-LVQELDL-TDCYGV-----NDRGLEYISK-CSNLQRLKLGLC--TNISDKGIFHIGSKCSKLLELDLYRCAGFGDDGLAALSRGCKSLNRLILSYCCELTDTGVEQIRQLELLSHLELRGLKNITGVGLAAIASGCKKLGYLDVKLCENIDDSGFWALAYF-SKNLRQINLCNCS-VSDTALCMLMSN------LSRVQDVDLVHLSRVTVEGFEFALRACCNRLKKLKLLA-PLRFLLSSELLETLHARGCRIRWD----------------------------------------------------------------------------------------------------------------------------------------------   [642]
lcl|Smo_TIR1_37_1_unnamed_protein_product                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MACSSSSGSRRPS-ACLLDFVDE--------------HI-LLEVLGKIS---DSFDRRSWRMVC--------RTF--YKLECSVRRRLQLLRAEL------------------LPQALDRYERLEELDLTCCAGVTDENLI-----HVADKAGKRLAAIYLNRICGFTSTGLRYLSQH-CLSLVEMDLSYCSYVEDDGLLGLARLNRIEKLKLTGCIRVTDMGLESLAAGCH-----------RLKTLVLKGCVAITDAGIKLVAARSEELMILDLSFT-EVTDE-------GVKYVSEL-KALRTLNLMACNNVGDRA---------------------------LSYLQENC-KSL------------------------------------------------------------------------------------------------------------------------------------------VVTEDAF---LDFEKPN-GIQTLR---------------------------------------LDGC-EFTHDSLDRVAAGCQELKELSLC-----------KSRGVTDKRIDRLITSC-KSLKKLDLTCCFDVTEISLLSIARSSTSIKSLKLESS--------------LMVSDNSLPMVFESCH-LLEELDV-TDC-NL-----TGAGLEPIGN-CVLLRVLKLAFC---NISDYGIFFVGAGCHKLMELDLYRCRSVGDAGVISVVNGCQDLRVLNLSYCSRISDASMTAIARLSKLSQLEIRGCTLVTSDGLTQVAAGCKRLVELDIKRCTRIGDPGLLALEHL-CPDLRQINVSYCP-LTNNGMMAL-AK------LGCMQNMKLVHLKNVSMECFGNALLN-CGSLKK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [580]
;
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