#NEXUS 
[MacClade 4.08 registered to Hirai, ERATO]


BEGIN DATA;
	DIMENSIONS  NTAX=20 NCHAR=755;
	FORMAT DATATYPE=PROTEIN  SYMBOLS = " 1 2 3 4"  MISSING=? GAP=- ;
MATRIX
[                                                                                                                                             10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750   ]
[                                                                                                                                             .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .     ]

'gi|18405258|ref|NP 565922.1| ELF4 (EARLY FLOWERING 4) [Arabidopsis thaliana] >gi|17065630|gb|AAL33809.1| unknown protein [Arabi'    ----M-------------------------------------------------------------------------------------------------------KRNGETKRRRNVA-EEAEQGEDP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVNMYSDLNT-SFSSGF--HGGKNGHDGGGAAGTRA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [111]
'gi|56694219|gb|AAW22881.1| putative EARLY flowering 4 protein [Lycopersicon esculentum]'                                    ----M---------------------------------------------------------------------------------EDTFKRHRQTLAKPQSLTTDDRRRPRDLSTEEGNS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DVWNNFSNRFRQVQSVLDRNRSLIQQVNENHQSRTTDNMVRNVSLIQELNGNISKVVSLYSDIST-NFSTMF--RQGNDFIGDDTNNH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [121]
'gi|34499881|gb|AAQ73526.1| early flowering 4 [Mesembryanthemum crystallinum]'                                    ----M-----------------------------------------------------------------------MSYSGAESSMEDGGNHHRQTLA-------GNRRRRSNNNNNNNNG-EEYFSGGDP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AEWNAFAESFSKVQSVLDRNRMLIQQANENHQSRVPDNMVKNVAIIQELNGNISKVASIYSDLSV-NFTGVV--GQHRQQGGNSKSGGSNGRSS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [139]
'gi|15227672|ref|NP 180556.1| unknown protein [Arabidopsis thaliana] >gi|49823506|gb|AAT68736.1| hypothetical protein At2g29950'     ----M-------------------------------------------------------------------------------------------EASRNRSLVGNNRSPEMNENDGEDV-AASAAVEDV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIPDNVSRNVGLINEINGNISQVMEIYSDLSL-NFAKKF--DQRRRTTKDGDTTTTTTGS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [125]
'gi|4680201|gb|AAD27564.1| hypothetical protein [Sorghum bicolor]'                                    ----M-------------------------------------------------------------------------------------------------------------------A-NGGGQAVDG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLIQTFHKSFVQVQSLLDQNRMLISEINQNHESRAPDNLTRNVGLIRELNNNIRRVVGLYADLSA-SFARTM--DASSDGDSSGTAIRSSAAAAAA---------------AGHKRIRWDGWKNFGWVTKQGYSSKHLEWKLFAAQFQVYYCTRRTLVETLQMGQLRSHSYKMSLHIKNDDYRLESLHYPHRKVTTTSMATILLTHWCTFCFQIRDSLLGSTDIVDHASFYKSCSHIIKYSWLHNEHRNSGNEHHARAISSRDVHPPGAILFSCLVTYSSIFMQSCLQNMITINLCSEPSELDQRLKQRLKSCRKALLIDKDEPETTVNRKYGTLSNRSKSPTLCGPSQLPPRPQAHYRTNSVQLQIDHHELQQYLFNGRAWRSSKRIEVLLHATKIPVYICCHSQGRHSHIKDLNDRYAQPTGSLALHPIVCNQEVVLPQKYCC   [438]
'gi|77552028|gb|ABA94825.1| expressed protein [Oryza sativa (japonica cultivar-group)] >gi|77552027|gb|ABA94824.1| expressed pro'    ----M-------------------------------------------------------------------------------------------------------------EGDSFSG-MANGGQVDN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLIQTFHKSFVQVQSILDQNRMLINEINQNHESRAPDNLTRNVGLIRELNNNIRRVVGLYADLSA-SFARTM--DASSEGDSSGTLRSSDGAG-----------------RSGQKRVRPG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [117]
'gi|4680489|gb|AAD27669.1| hypothetical protein [Oryza sativa]'                                    ----M-------------------------------------------------------------------------------------------------------------EGDSFSG-MANGGQVDN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLIQTFHKSFVQVQSILDQNRMLINEINQNHESRAPDNLTRNVGLIRELNNNIRRVVGLYADLSA-SFARTM--DASSEGDSSGTLRSSDGAG-----------------RTGQKRVRPG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [117]
'gi|50944925|ref|XP 481990.1| unknown protein [Oryza sativa (japonica cultivar-group)] >gi|38637104|dbj|BAD03359.1| unknown prot'    ----M-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EEDSVISNGGREEEVVVANGSGGGVGGTARS---SGGGGGKVVQVLQRNFGEVQGILEQNRVLIQEISQNHEARDADGLTRNVALIRELNTNIARVVDLYANLSG-SFSRSV--TAAASANNTNATNSTSPSAAAA--------------AKASKRSRATDTE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [144]
'gi|12323759|gb|AAG51839.1| hypothetical protein; 65517-65170 [Arabidopsis thaliana] >gi|21554047|gb|AAM63128.1| unknown [Arabid'    ----M-------------------------------------------------------------------------------------------------------------EGDVYSG-FGERYQMDG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRNVGLIRELNNNIRTVASLYGDLSH-SFARSV--DASSEGESTGTLKSDGKA-------------------NNQKRFRSG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [115]
'gi|18410139|ref|NP 565044.1| unknown protein [Arabidopsis thaliana] >gi|19310623|gb|AAL85042.1| unknown protein [Arabidopsis th'    MESRM-------------------------------------------------------------------------------------------------------------EGDVYSG-FGERYQMDG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRNVGLIRELNNNIRTVASLYGDLSH-SFARSV--DASSEGESTGTLKSDGKA-------------------NNQKRFRSG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [119]
'gi|18396289|ref|NP 565334.1| unknown protein [Arabidopsis thaliana] >gi|20197919|gb|AAM15312.1| Expressed protein [Arabidopsis'     ----M-------------------------------------------------------------------------------------------------------------EGDTISRMMGSGVQMDG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRNVGLIRELNNNVRRVAHLYVDLSN-NFSKSM--EASSEGDSSE--------------------------GRGNRRIRPA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [109]
lcl|Smo_ELF4_1_1_unnamed_protein_product                                    ----M-------------------------------------------------------------------------------------------------------------EADASSA-PAKAPPVDR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KMWAAFERGFSQVQFLLDHNRLLINEINQNQESKVPESLSRNVVLIKELNKNIGQVVSLYSTISS-SFVKSF--ENSQEGDSIPAPGTAKAMDSPA-------------AAAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [115]
lcl|Smo_ELF4_2_1_unnamed_protein_product                                    ----M-------------------------------------------------------------------------------------------------------------EADASSA-PAKAPPVDR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KMWAAFERGFSQVQFLLDHNRLLINEINQNQESKVPESLSRNVVLIKELNKNIGQVVSLYSTISS-SFVKSF--ENSQEGDSIPPPATAKAMDSPA-------------AAAGAENVVLQELDDLVLIVELGNVHWSFAVHVSYSPVGTRNKEKLVQSKRERTKRLSRH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [170]
'gi|50916469|ref|XP 468631.1| expressed protein [Oryza sativa (japonica cultivar-group)] >gi|37991859|gb|AAR06305.1| expressed p'    ----M----------------------------------------------------------------------------------------------------------------DGDT-LSAAAAEDG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVLHAFQTSFVQVQSLLDQNRVLINEINQNHESKVPGDLSRNVGLIRELNNNIRRVVDLYADLSS-LFAASSPGPAASEGASVGTAVR----------------------HAGHKRVRSTHLD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [114]
'gi|9665116|gb|AAF97300.1| Hypothetical protein [Arabidopsis thaliana] >gi|8778455|gb|AAF79463.1| F1L3.15 [Arabidopsis thaliana]'    ----M-------------------------------------------------------------------------------------------------------------EGDVLSG-FGDRHNMDG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNVGLIKELNNNIRRVASLYGDLSH-SFARSV--DASSEGESSGTLKSDGKA--------------------NQKRFRSDISLFADVATSRSFPHNYTDPNWHSEIE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [141]
'gi|18394486|ref|NP 564024.1| unknown protein [Arabidopsis thaliana] >gi|62318582|dbj|BAD94981.1| hypothetical protein [Arabidop'    ----M-------------------------------------------------------------------------------------------------------------EGDVLSG-FGDRHNMDG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNVGLIKELNNNIRRVASLYGDLSH-SFARSV--DASSEGESSGTLKSDGKA--------------------NQKRFRSG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [114]
lcl|Ppa_ELF4_1_1_unnamed_protein_product                                    ----M----------------------------------------------------------------------------------------------------------------DRER-GDKAPPVDR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RVSSIFNNVSRQVQFLLDHNRLLINEINQNHEAKIPEGLTRNVMLIRQLNSNIGKVVDLYANLSS-NFSNVF--ENLQEVNSDPINTTSRPVSNSSGRSVPGVAATQSSGQNPHKKLRSTDFP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [134]
lcl|Smo_ELF4_5_1_unnamed_protein_product                                    ----?--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGAVQAPTPDVLRGRAAENRDGEDPETDRGGALPVWQEKLRVLIKLAFAEPRTGHRKDLHSDFQRRRKAGKRESDRAHKGFSSQKKTHRFEPRCLPSRRETKNTVKRTFHQVQFLLDHNRLLIKEINVNQESQIPESLSRNVMLIKELNYNIKRVVELYAGLPT-SFIRSF--SNLP------SQVTAATGTYPA--------------EQGLKRARST-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [197]
'gi|50944927|ref|XP 481991.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] >gi|38637105|dbj|BAD03360.1| hypothe'    ----MRAGTAGCGGFGGGGGARARAGGGRGARKAMTGGPHPSARAAGGPACQRRARGEEPMGRRRGERGREEKWAEPAQERKGGKRTSFRAWHDGPDTSPPRFPPLPPRRHATSPSPASLL-KSSSAPPDSASASAPPLCLLQSPTPVGQRRYASGRRQAPIGRLPRRLGPGAQSGGRPHPLEREEREALKRRRHSAGGRSEQSIRLDLGM----------------------------------------------------------MEEDSFINNDVGEEVVVANGGDGEGVGGMARSDDGGDGGGGNVVQDPPLSLGEVRGILEQNHTLIQEISQNHKARDADRLTRNVALIRDLNTNIARVVDLYANLTGSSHSHTT--SDVASATNTNATNSSSPSAAAA-------------TAEVSKQPHTTDTDAK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [357]
lcl|4131_Cre_unnamed_protein_product                                    ----M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTEYTPSWPGFQR-LESVQEVLDRNKLLISEINRNHELRTPESLLRNVTLIRELNGNMATVVEAYRQLATLIDIPGS--APAA------NQQ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [85]
;
END;


BEGIN CODONS;
	CODESET  * UNTITLED = Universal: all ;
END;


BEGIN ASSUMPTIONS;
	OPTIONS  DEFTYPE=unord PolyTcount=MINSTEPS ;
	EXSET * UNTITLED  =  1-321 375-755;
END;


BEGIN MacClade;
	Version 4.0  87;
	LastModified -1055336237;
	FileSettings editor  '0' '0' '1' '1';
	Singles 100;
	Editor 00011001111111100100010010 '1' '16' Geneva '14' '410' '1' all;
	EditorPosition  '44' '29' '565' '1555';
	TreeWindowPosition  '46' '6' '993' '1630';
	ListWindow Characters closed Geneva '9' '50' '25' '273' '359' 000;
	ListWindow Taxa closed Geneva '9' '50' '10' '193' '490' 100000000;
	ListWindow Trees closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow TypeSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow ExSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow CharSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow TaxSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow CharPartitions closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow CharPartNames closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ;
	ChartWindowPosition  '52' '30' '968' '1620';
	StateNamesSymbols closed Geneva '9' '10' '50' '30' '148' '220';
	WindowOrder  Data;
	OtherSymbols &/ 00 ?-;
	Correlation  '0' '0' '1000' '0' '0' 10011010;
	Salmo 00000001;
	EditorFile  '4';
	ExportHTML _ MOSS  '100' 110000;
	PrettyPrint 10;
	EditorToolsPosition  '861' '81' '115' '165';
	TreeWindowProgram 10;
	TreeWindow 0000;
	Continuous  '0' '3' 1;
	Calculations 0000001;
	SummaryMode  '0' '0' 0;
	Charts  Geneva '9' (normal) 0010;
	NexusOptions  '0' '0' '50' 001011001;
	TipLabel  '1';
	TreeFont  Geneva '9' (normal);
	TreeShape  1.0 1.0 0100;
	TraceLabels 0101;
	ChartColors  '0' '0' '65535' '9' '0' 1;
	ChartBiggestSpot 1;
	ChartPercent 10;
	ChartBarWidth  '10' 1;
	ChartVerticalAxis 10101;
	ChartMinMax  '0';
	TraceAllChangesDisplay  '1' 1;
	BarsOnBranchesDisplay  '0' '0' '60000' '10000' '10000' '10000' '10000' '60000' '65000' '65000' '65000' '6' '1' 0000101;
	ContinuousBranchLabels 0;
	AllStatesBranchLabels 1;
	IndexNotation  '2' 1;
	PrintTree  10.00 '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' Geneva '9' (normal) Geneva '10' (normal) Geneva '9' (normal) Geneva '9' (normal) Geneva '9' (bold ) Geneva '9' (normal) Geneva '9' (normal) '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '1' '1' '1' '1' '0' '0' '-39' '4' '-40' '0' '1' '2' '1' '8' '0' '0' '0' '2' 1000111000000000000100000111000;
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	BothTools  '1';
END;