#NEXUS [MacClade 4.08 registered to Hirai, ERATO] BEGIN DATA; DIMENSIONS NTAX=45 NCHAR=77; FORMAT DATATYPE=PROTEIN SYMBOLS = " 1 2 3 4" MISSING=? GAP=- ; MATRIX [ 10 20 30 40 50 60 70 ] [ . . . . . . . ] 'gi|30678240|ref|NP 849576.1| FUS5 (FUSCA 5); MAP kinase kinase [Arabidopsis thaliana] >gi|18056669|gb|AAL58108.1| CSN complex s' MDIEQKQAEIIDQLVKRASTCKSEALGPLIIEATSHPSLFAFSEILALPNVAQLEGTTDSVYLDLLRLFAHGTWGDY [77] 'gi|42571297|ref|NP 973739.1| FUS5 (FUSCA 5); MAP kinase kinase [Arabidopsis thaliana]' MDIEQKQAEIIDQLVKRASTCKSEALGPLIIEATSHPSLFAFSEILALPNVAQLEGTTDSVYLDLLRLFAHGTWGDY [77] 'gi|18378920|ref|NP 563645.1| FUS5 (FUSCA 5); MAP kinase kinase [Arabidopsis thaliana] >gi|22137006|gb|AAM91348.1| At1g02090/T7I' MDIEQKQAEIIDQLVKRASTCKSEALGPLIIEATSHPSLFAFSEILALPNVAQLEGTTDSVYLDLLRLFAHGTWGDY [77] lcl|Ppa_FUS5_1_1_unnamed_protein_product MEVEQKQADLVQQFVLLAANARGRAAVELITHATSHPQLFAFSELLASPHIAELKGTEHSASLDLLRLFAHGTWSDY [77] lcl|Smo_FUS5_2_1_unnamed_protein_product MEVEERQSELVEQFVMLAKSARGRAAAELIAHATSHPSLFAFAELLAMPHIGELQGTEHSSSLDVLKLFAHGTWSDY [77] 'gi|50509216|dbj|BAD30468.1| putative COP9 complex subunit, FUS5 [Oryza sativa (japonica cultivar-group)]' MDAERRQAELIEQFSAQAAALSSSALAALVLEATSHPALFAFSELLSLPALSKLTGTQYASSLDVLRLFAYGTLKDY [77] lcl|Ppa_FUS5_2_1_unnamed_protein_product MEVEQKQGDLVQQFVLLATSARGRAAVELITHATSHPQLFAFSELLASPHIAELKGTEHSASLDLLRLFAHGTWTDY [77] 'gi|66824645|ref|XP 645677.1| hypothetical protein DDB0202834 [Dictyostelium discoideum] >gi|83776754|gb|ABC46699.1| COP9 signal' MTETLTDGNALKQFVVLAKSSKGRAIVSIIEKALNHPSVFVFGELLDMPNVQQLKETEFKNYYDLLLIFAYGSFIDY [77] 'gi|15215085|gb|AAH12659.1| Cops7b protein [Mus musculus]' MAEQKPSSNLLEQFILLAKGTSGSALTTLISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLLNLFAYGTYPDY [77] 'gi|73994134|ref|XP 852665.1| PREDICTED: similar to COP9 constitutive photomorphogenic homolog subunit 7B [Canis familiaris] >gi' MAEQKPSSNLLEQFILLAKGTSGSALTALISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLLNLFAYGTYPDY [77] 'gi|12232385|ref|NP 073567.1| COP9 constitutive photomorphogenic homolog subunit 7B [Homo sapiens] >gi|10434205|dbj|BAB14170.1|' MAEQKPSSNLLEQFILLAKGTSGSALTALISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLLNLFAYGTYPDY [77] 'gi|60552478|gb|AAH91493.1| COPS7B protein [Homo sapiens]' MAEQKPSSNLLEQFILLAKGTSGSALTALISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLLNLFAYGTYPDY [77] 'gi|74220003|dbj|BAE40581.1| unnamed protein product [Mus musculus] >gi|26349105|dbj|BAC38192.1| unnamed protein product [Mus mu' MAEQKPSSNLLEQFILLAKGTSGSALTTLISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLLNLFAYGTYPDY [77] 'gi|74206679|dbj|BAE41591.1| unnamed protein product [Mus musculus]' MAEQKPSSNLLEQFILLAKGTSGSALTTLISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLLNLFAYGTYPDY [77] 'gi|3309176|gb|AAC33904.1| COP9 complex subunit 7b [Mus musculus]' MAEQKPSSNLLEQFILLAKGTSGSALTTLISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLLNLFAYGTYPDY [77] 'gi|55234258|gb|EAA00161.2| ENSANGP00000011626 [Anopheles gambiae str. PEST] >gi|58393550|ref|XP 320160.2| ENSANGP00000011626 [A' MTQQYSAHNPIEQYVLLAKGAKGAACTELIKQVLEAPGVHVFGELLAMPNIKELQNGPHANYYNTLNLFAYGTYRQY [77] 'gi|62655356|ref|XP 343615.2| PREDICTED: similar to Cops7b protein [Rattus norvegicus]' MAEQKPSSNLLEQFILLAKGTSGSALTTLISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLLNLFAYGTYPDY [77] 'gi|62897317|dbj|BAD96599.1| COP9 constitutive photomorphogenic homolog subunit 7B variant [Homo sapiens]' MAEQKPSSNLLEQFILLAKGTSGSALTALISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLLNLFAYGTYPDY [77] 'gi|71679865|gb|AAI00202.1| Unknown (protein for MGC:114836) [Xenopus laevis]' MAEQKPSSSILEQFILLAKGTKGSALPALVNQVLEAPGVYVFGELLDLPHVQELGDGPHSGYLKLLNLFAYGTYPDY [77] 'gi|76779768|gb|AAI06399.1| Unknown (protein for MGC:131019) [Xenopus laevis]' MAEQKPSSSILEQFILLAKGTKGSALPALVNQVLEAPGVYVFGELLDLPHVQELGDGPHSGYLKLLNLFAYGTYPDY [77] 'gi|51703898|gb|AAH81067.1| MGC81975 protein [Xenopus laevis]' MAEQKPPSNALEQFILLAKGTKGSALPALVNQVLEAPGVYVFGELLDLPNVLELGDGPHSGYLKLLNLFAYGTYPDY [77] 'gi|54635467|gb|EAL24870.1| GA15197-PA [Drosophila pseudoobscura]' MTPSKSKETFLEKFCVLAKNATGPALLDVLKQVLEAPNVFVFGELLVEPNVAELKDGPDAKYYNTLNLFAYGTYKEY [77] 'gi|66546468|ref|XP 395310.2| PREDICTED: similar to ENSANGP00000011626 [Apis mellifera]' MTTEKSANNPLEQFVLLAKTAKGAAAIELIKQAVETPGVHVFGELLDMPNIKELENGPYVQYWNTLNLFAYGTYKEY [77] 'gi|46409094|gb|AAS93704.1| RH63621p [Drosophila melanogaster]' MTPSKSKETFLEKFCVLAKSSTGAALLDVIRQALEAPNVFVFGELLAEPSVLQLKDGPDSKHFETLNLFAYGTYKEY [77] 'gi|22024078|ref|NP 610379.2| COP9 complex homolog subunit 7 CG2038-PA [Drosophila melanogaster] >gi|21627682|gb|AAF59097.2| CG2' MTPSKSKETFLEKFCVLAKSSTGAALLDVIRQALEAPNVFVFGELLAEPSVLQLKDGPDSKHFETLNLFAYGTYKEY [77] 'gi|72008467|ref|XP 785591.1| PREDICTED: similar to COP9 constitutive photomorphogenic homolog subunit 7B [Strongylocentrotus pu' MNSSLNSPCSLEQYLLLAKTAKGAAMVALIKQCVEVSGVHVFGELLEMPNVTELADGPNVNYVELLNLFAFGTYSDY [77] 'gi|50752333|ref|XP 422740.1| PREDICTED: similar to Cops7b protein [Gallus gallus]' MAEQKPSCNLLEQFILLAKGTSGSALTALINQVLEAPGVYVFGELLELTNVQELAEGSNAAYFQLLNLFAYGTYPDY [77] 'gi|71896827|ref|NP 001025946.1| COP9 complex subunit 7a [Gallus gallus] >gi|53133726|emb|CAG32192.1| hypothetical protein [Gall' MAEGKVTGQSQEQFLLLAKAARGAALASLIHQVLEAPGIYVFGELLDMPAVRELADSEFSPVFHLLTIFAYGTYADY [77] 'gi|76611003|ref|XP 875421.1| PREDICTED: similar to COP9 constitutive photomorphogenic homolog subunit 7B [Bos taurus]' MAEQKPSSNLLEQFILLAKGTSGSALTALISQVLEAPGVYVFGELLELANVQELAEGANAAYLQLLNLFAYGTYPDY [77] 'gi|6120135|gb|AAF04307.1| COP9 complex subunit 7a [Homo sapiens]' MSEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADY [77] 'gi|7022499|dbj|BAA91620.1| unnamed protein product [Homo sapiens]' MSEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADY [77] 'gi|73997739|ref|XP 543849.2| PREDICTED: similar to COP9 signalosome complex subunit 7a (Signalosome subunit 7a) (SGN7a) (JAB1-c' MSEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADY [77] 'gi|7242142|ref|NP 036133.1| COP9 (constitutive photomorphogenic) homolog, subunit 7a [Mus musculus] >gi|13277626|gb|AAH03724.1|' MSEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADY [77] 'gi|55637729|ref|XP 508964.1| PREDICTED: similar to COP9 complex subunit 7a; COP9 (constitutive photomorphogenic, Arabidopsis, h' MSEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADY [77] 'gi|7705330|ref|NP 057403.1| COP9 complex subunit 7a [Homo sapiens] >gi|15080010|gb|AAH11789.1| COPS7A protein [Homo sapiens] >g' MSEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADY [77] 'gi|62204486|gb|AAH93015.1| COPS7A protein [Homo sapiens]' MSEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADY [77] 'gi|76616462|ref|XP 581310.2| PREDICTED: similar to COP9 signalosome complex subunit 7a (Signalosome subunit 7a) (SGN7a) (JAB1-c' MSEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADY [77] 'gi|62648151|ref|XP 232351.3| PREDICTED: similar to COP9 signalosome complex subunit 7a (Signalosome subunit 7a) (SGN7a) (JAB1-c' MSEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELADSDFASTFRLLTVFAYGTYADY [77] 'gi|12859161|dbj|BAB31554.1| unnamed protein product [Mus musculus]' MSEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADY [77] 'gi|12850341|dbj|BAB28682.1| unnamed protein product [Mus musculus]' MSEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADY [77] lcl|Smo_FUS5_1_1_unnamed_protein_product MEVEERQSELVEQFVMLAKSARGRAAAELIAHATSHPSLFAFAELLAMPHIGELQGTEHSSSLDVLKLFAHGTWSDY [77] 'gi|71018815|ref|XP 759638.1| hypothetical protein UM03491.1 [Ustilago maydis 521] >gi|46099396|gb|EAK84629.1| hypothetical prot' MAAPLTSTDRLEALLLVARSTKGAAAVNLIHQAVSAPGVFFFGELFDVAGVAELSMSSLVAGYQLLCLFSYGTYTDY [77] 'gi|67526331|ref|XP 661227.1| hypothetical protein AN3623.2 [Aspergillus nidulans FGSC A4] >gi|40740641|gb|EAA59831.1| hypotheti' MDVHHRALDALQSFIALSSSATSRYIASIITNATSSPHTYVFAELLERPAVQALTPAEFQSYLTLLEIFAWGTWQDY [77] 'gi|84996679|ref|XP 953061.1| hypothetical protein TA08215 [Theileria annulata strain Ankara] >gi|65304057|emb|CAI76436.1| hypot' VEADLAYKFWKKRVECLPDLTTNMATVTFVVRSLRSEDILYFDQLLLMPAVAHLKETRYAPLISLLEIFIRGNLEDL [77] 'gi|71028776|ref|XP 764031.1| hypothetical protein TP04 0396 [Theileria parva strain Muguga] >gi|68350985|gb|EAN31748.1| hypothe' VEADLAYKFWKKRVECLPDLTTNMATVTFVVRSLRSEDILYFDQLLLMPAVAHLKETRYAPLISLLEIFIRGNLEDL [77] ; END; BEGIN CODONS; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE=unord PolyTcount=MINSTEPS ; END; BEGIN MacClade; Version 4.0 87; LastModified -1063533143; FileSettings editor '0' '0' '1' '1'; Singles 100; Editor 00011001111111100100010010 '1' '8' Geneva '12' '842' '1' all; EditorPosition '64' '1' '931' '1559'; TreeWindowPosition '46' '6' '985' '1630'; ListWindow Characters closed Geneva '9' '50' '10' '273' '359' 000; ListWindow Taxa closed Geneva '9' '50' '10' '276' '490' 100000000; ListWindow Trees closed Geneva '9' '50' '10' '276' '490' ; ListWindow TypeSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow ExSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow CharSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow TaxSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow CharPartitions closed Geneva '9' '50' '10' '276' '490' ; ListWindow CharPartNames closed Geneva '9' '50' '10' '276' '490' ; 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