#NEXUS [MacClade 4.08 registered to Tomoaki Nishiyama, National Institute for Basic Biology] BEGIN DATA; DIMENSIONS NTAX=85 NCHAR=1930; FORMAT DATATYPE=PROTEIN SYMBOLS = " 1 2 3 4" MISSING=? GAP=- ; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 1510 1520 1530 1540 1550 1560 1570 1580 1590 1600 1610 1620 1630 1640 1650 1660 1670 1680 1690 1700 1710 1720 1730 1740 1750 1760 1770 1780 1790 1800 1810 1820 1830 1840 1850 1860 1870 1880 1890 1900 1910 1920 1930] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .] 'gi|15229321|ref|NP 187112.1| FLK; nucleic acid binding [Arabidopsis thaliana] >gi|6175183|gb|AAF04909.1| putative RNA-binding p' MAE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AEDQQNFVAHNGDQVPDQGSDELHNGLPYQVHDETLVHQPYEVEDPILEPQQYEVPDPTLEPQQYEVPDQT-LEPQQYEVDDQLEYHQYQLQDQANEDVQDHSQDDLQYQPQNQEQFQ---------LQDEAHDQAQYQAQGDVQDHNGDEVQDKVEDE------EGIP--EHLESLQKSEP--EEDATVGGEEKRWPGWPG--------ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKIL---DGPP-GTTER-----------------AVMVSGKEE--------------------------------------------------------------------------------------------PESSLPP---SMDGLLRVHMRIV--D-------GLDGEAS---------Q---APP-------PSK-VSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLG--------------------------------SE-DLPVFA--LQDDRVV-----------------EVVGEPTSVHRALELIASHLRK----FLVDRSII------------------PFFENQ----------MQKPTRQMD---------------------------------------------------------HMPPP----HQSWGPPQ-----------------------------G---HAPSVGGGGYGHNPPPYMQPPPRHDSYYP-PPEMRQPPMEKQP-----------HQGIS---AYGR--E--PPM------N-------------------------------------------------------VHVSSA---------------------------------------------PP------------------------MVAQ-----QVTQQMQIPLSYADAVI-----GTSGSNISYTRRLSGATVTIQ-ETRG---------------VPGEMT----------------------------------------VEV-----------------------------------------------SGT-GSQVQ----TAVQLI-----QNFMAEAG-----------------------------------A-----------------PAPAQPQT-VAPE-QQGYNPY--------------------------------------ATHGSVYAAAPTN--P-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGGYATD-----YSSGYG-------------------------------Y [577] 'gi|61661326|gb|AAX51269.1| FLK [Arabidopsis thaliana] >gi|61661324|gb|AAX51268.1| FLK [Arabidopsis thaliana]' MAE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AEDQQNFVAHNGDQVPDQGSDEVHNGLPYQVHDETLVHQPYEVEDPILEPQQYEVPDPTLEPQQYEVPDQT-LEPQQYEVDDQLEYHQYQLQDQANEDVQDHSQDDLQYQPQNQEQFQ---------LQDEAHDQAQYQAQGDVQDHNGDEVQDKVEDE------EGIP--EHLESLQKSEP--EEDATVGGEEKRWPGWPG--------ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKIL---DGPP-GTTER-----------------AVMVSGKEE--------------------------------------------------------------------------------------------PESSLPP---SMDGLLRVHMRIV--D-------GLDGEAS---------Q---APP-------PSK-VSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLG--------------------------------SE-DLPVFA--LQDDRVV-----------------EVVGEPTSVHRALELIASHLRK----FLVDRSII------------------PFFENQ----------MQKPTRQMD---------------------------------------------------------HMPPP----HQSWGPPQ-----------------------------G---HAPSVGGGGYGHNPPPYMQPPPRHDSYYP-PPEMRQPPMEKQP-----------HQGIS---AYGR--E--PPM------N-------------------------------------------------------VHVSSA---------------------------------------------PP------------------------MVAQ-----QVTQQMQIPLSYADAVI-----GTSGSNISYTRRLSGATVTIQ-ETRG---------------VPGEMT----------------------------------------VEV-----------------------------------------------SGT-GSQVQ----TAVQLI-----QNFMAEAG-----------------------------------A-----------------PAPAQPQT-VAPE-QQGYNPY--------------------------------------ATHGSVYAAAPTN--P-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGGYATD-----YSSGYG-------------------------------Y [577] 'gi|77556446|gb|ABA99242.1| KH domain, putative [Oryza sativa (japonica cultivar-group)]' M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DGNIEN-PAEDMSGIASNLDNEEQAIPLSDVPEQYKED----PENTYDEE---------TKDSSYEESGIPYNEDQVNINDGNVGHQHEED------QAIP--SEEGHAYGGEAQGEQQANAVTDEKKWPGWPG--------ESVFRILVPAQKVGAVIGRKGEFIKKMCEESRARIKVL---DGPP-GVPDR-----------------AVMISAKDE--------------------------------------------------------------------------------------------PDAPLPP---AVDGLLRVHKRIT--D-------GLDGESD---------QPQRAAG-------TVG--PTRLLVPASQAGSLIGKQGATIKSIQDASKCVLRILE--------------------------------S---VPPVA--LSDDRVV-----------------EIQGEPLDVHKAVELIASHLRK----FLVDRSVL------------------PLFEMQ----------MKVHNAHRE---------------------------------------------------------QPMPP----PQTWGPPP-----------------------------PWG-HPSNVPPGGPGYGGNPQFMPPRPQDHYYP-PPDV--PPVEKQP-----------HYGIS---SYGR--DAPPTGA----PP-------------------------------------------------------ASGNQH---------------------------------------------PP------------------------HGSS-----QITHSMQVPLSYADAVI-----GAAGASISYIRRHSGATISIQ-E--G---------------VPGEMT----------------------------------------VEI-----------------------------------------------SGS-ASQVQ----TAQQLIKQHLLQNFMAEAS-----------------------------------P-----------------QGPPQAPAPPAQPVDTGYSSY--------------------------------------PPY---GGTSYGSPPG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAG--PH-----NGGSYGAVTGTPCSMPVHVLQDPGTRDLQRQPRGFGGA [542] 'gi|50901642|ref|XP 463254.1| putative RNA binding protein [Oryza sativa] >gi|16924113|gb|AAL31692.1| putative RNA binding prote' M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DGLVENFDADDLGEMPQNHYNEEQLIPYSDVSHPYNEE----PDNM-----------------DNVEEGNPYIQ-QVSLYSEEPENQYNEE------PSNPYQEESDNAYNGEVK-QQDSLPVEADKKWPGWPG--------ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKIL---DGPP-GVPER-----------------TVMISAKDE--------------------------------------------------------------------------------------------PDAPISP---AMDGLFRVYKRIT--D-------GSDGDSG---------QPERNIS-------NVG--PTRLLVPASQAGSLIGKQGATIKSIQDSSKSIVRIVE--------------------------------T---LPLVA--LNDDRVV-----------------EIQGEPVGVQKALESIASHLRK----FLVDRSVL------------------PLFEGQ----------MKMHNAQRE---------------------------------------------------------QAMAA----PQPWGPPQ-----------------------------PWGPPPSHLPPGGPGYGGHPQFMPPRPQDNYYP-PPDV--PSMEKQP-----------HYGIS---AYGR--EA-PTGV-----S-------------------------------------------------------ASGNQP---------------------------------------------PS------------------------HVAS-----QVTHNMQIPLSYADAVI-----GAAGASISYIRRHSGATVTIQ-ESRG---------------APGEMT----------------------------------------VEI-----------------------------------------------IGS-ASQVQ----TAQQLV-----QNFMAEAP-----------------------------------Q-----------------GPPPPASNPPAPAVDLSYGSY--------------------------------------PPP---YGASYGSAAS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGPAPH-----NGGSYGGTT-----YPSY------------------GY [510] lcl|Ppa_FLK_1_1_unnamed_protein_product MAE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEAMEVIEVAEVTVVT------------TPAKEEPQQEEEYVPVCIVEDEHVLPLPEDVASP--PQEVQPAVSAEALLVKEEKETEPQTEDEAPRAPSPIDVKPDSLLDGNSLARGPTTP---------TGSKRSRDGGEEKDGEKKWAGWPG--------DNVFRLVVPVQKVGGIIGRKGEFVKRMCEETRSRIKIL---EGVP-GTAER-----------------IVMVSARED--------------------------------------------------------------------------------------------PEAAISP---AMEGLLRVHRRVI--E-------GAEPESV---------DAEIAPG------------------AATQAGSLIGRQGATIKSIQDTSGANVRVLP--------------------------------------------ADDRVV-----------------EVQGDPRNVQRAMELVVSHLRK----FLVDRSVL------------------PLFELN----------RAVANQNNQ---------------------------------------------------------------QSTGSQWQQPS----------------------------------------------STQQQQPPSYSSNDST-YYGGADISHHSQTQQQSHDLANQHHHGVS---MYGR--D--PTLGG------------------------------------------------------------SIAPPP---------------------------------------------PA------------------------PVIT-----QVTQHMQIPLSYADAII-----GSAGANISYMRRTSGATITIQ-ETRS---------------VPGEMT----------------------------------------VEI-----------------------------------------------HGS-ASQVQ----TAQQLI-----QNFMTGAS-----------------------------------S------------------GPPPYTSTYSSTVDTNYSSY--------------------------------------PSQPSMYSTTPATGPP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AASYASH-----YNTSYD----------------------------ISYV [511] lcl|Ppa_FLK_18_1_unnamed_protein_product MAE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEATEVIQVTEVIQVTEVIQLTEVAVAPVSANDQPPQEESHLSASSVEDQNVPLLPEQVLPPSESEEGQTAAALEIAPLEQEQGAEAQLEEKALLSPPPIDVKADTALDESTPARGSTPP---------AGAKRIREGGEEKDGEKKWAGWPG--------DNVFRLIVPVQKVGGIIGRKGEFVKRMCEETRSRIKIL---EGVP-GTAER-----------------IVMVSARED--------------------------------------------------------------------------------------------PEAAISP---AMEGLLRVHRRVI--E-------GAEPESA---------DAEIAPG-------GAP-VSSRLLVAATQAGSLIGRQGATIKSIQDSSGATVRVLP--------------------------------------------ADDRVV-----------------EVTGEPRNVQRATELVVAHLRK----FLVDRSVL------------------PLFELN----------RAVANQSNQ---------------------------------------------------------------QSTASQWQQPS----------------------------------------------STQQQQPPNYSSNDSS-YYGAAELPHHSQPQQQSHDLAN-HHHGLS---LYGR--D--PTLGG------------------------------------------------------------TIVPPT---------------------------------------------PA------------------------PVIT-----QVTQHMQIPLSYADAII-----GGAGANISYMRRTSGATITIQ-ETRS---------------VPGEMT----------------------------------------VEI-----------------------------------------------HGS-ASQVQ----TAQQLI-----Q---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [473] 'gi|37536904|ref|NP 922754.1| putative nucleic acid binding protein [Oryza sativa (japonica cultivar-group)] >gi|12597878|gb|AAG' MAD---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAAAAAAAEFGDPDS-----PPAPAAEEAEAAAAVGEE-AVPAAEAAAAKRWPGWPG--------DSVFRLVVPVLKVGSIIGRKGELIKRLVEETKAKVRVL---EGPV-GATER-----------------IVLVSGKED--------------------------------------------------------------------------------------------PALELPP---AMDALMRVFKRVS--G-------ITDGAAE---------GTQAATA-------PGV-CAARLLVPGAQAINLIGKQGASIKAIQEGTGATIRVISID------------------------------ER-ERPFYV--IEDERIV-----------------EIQGETEKVLKALQAVSNHLRK----FLVDHSVL------------------PLFEKT----------N-ATVTQDR---------------------------------------------------------STDAW----TD-ISHPS-----------------------------I---VSAQI------------NQPPPVVDEYIL-PMKRDPLFLEREP----LIDHNIHRSGVS---LYGR--D--PALSTLRTSG-------------------------------------------------------IHGGGP---------------------------------------------GG------------------------PLLS-----QITQTMQIPLTYAEDII-----GVKGANIAYIRANSGAVVTIQ-ESLG---------------SPDDIT----------------------------------------VEM-----------------------------------------------KGT-SSQVQ----AAYQLI-----QDSLAAHR-----------------------------------D--SVRSSYAGLDPVYRPSYSQYGSS-----------TY--------------------------------------PSSS--LP-SYSSMDG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGYSSSGLGG--YGSSYR-------------------------------Y [458] lcl|Smo_FLK_9_2_unnamed_protein_product ?AH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LS---------------------------------------------------------------ELLQCYNLAGCLVVTLLNTFLLEPRLTKCVFDKVRIEKEEGRALDPGPGERGGGSGVDDHARRTQLGDVMTR----------------------------------VRALHFCSSAANLAMLEETPPGERKWPGWPG--------DNVFRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKIL---DGVP-GTLERIPLQVLASSHAMQLV--QVLVSAKED--------------------------------------------------------------------------------------------PEATISP---AMDGLLRVHRRVT--E-------GSSGDGE---------PVEHIIL-------PSGLVQSRLLVTATQAGSLIGRQEE-----------------------------------------------------LPLCA--LADDRMV-----------------EVQGEILKVQKAMELVVSHLRK----FLVDRSVL------------------QLFEFNVSFAGSRSIGYKVHNGELQ---------------------------------------------------------RAMSSQVQGQQAAAIAT-----------------------------SWATPTV-------------AATTPYSSTDYY--------ADQAQSQ-----------HYAVS---MYGG--D--PGR------V-------------------------------------------------------DVTSTT---------------------------------------------PA------------------------PPAE-----SVSQQLQVPLLYADAII-----GTAGANINYMRRTSGATISIQ-ETPN---------------APGEMT----------------------------------------IEV-----------------------------------------------HGQ-STQVQ----TAQQLL-----QNFMAGAA-----------------------------------G-----------------TTAATTCT-------TSDYSY--------------------------------------TTQNTLYASGMSYSP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAYGSQ-----YSSGYV----------------------------YYGS [494] lcl|Smo_FLK_1_1_unnamed_protein_product MYK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HHASG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCRDAII-----GTAGANINYMRRTSGATISIQ-ETPN---------------APGEMT----------------------------------------IEV-----------------------------------------------HGQ-STQVQ----TAQQLL-----QNFMAGAA-----------------------------------G-----------------TTAATTCT-------TSDYSY--------------------------------------TTQNTLYASGMSYSP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAYGSQ-----YSSGYV----------------------------YYGT [117] 'gi|15236094|ref|NP 194330.1| nucleic acid binding [Arabidopsis thaliana] >gi|21280915|gb|AAM45112.1| putative nucleic acid bind' MAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VA-----------------------------------------------------------------------------------------------------------------------------DSVENNGSINLPENENLIPAGFSAAALL-DENS-----GAFPELNQPDSLAA-AET-TFPDTNDSAEERWPGWPG--------DCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVL---DGPV-NTPDR-----------------IVLISGKEE--------------------------------------------------------------------------------------------PEAYMSP---AMDAVLRVFRRVS--G-------LPDNDDD---------DVQNAGS-------V-F-SSVRLLVASTQAINLIGKQGSLIKSIVENSGASVRILS--------------------------------EE-ETPFYA--AQDERIV-----------------DLQGEALKILKALEAIVGHLRR----FLVDHTVV------------------PLFEKQ----------YLARVSQTR---------------------------------------------------------QEEPL----AESKSSLH-----------------------------T---ISSNL------------MEP-----DFSL-LARREPLFLERDS----RVDSRVQPSGVS---IYSQ--D--PVLSARHSPG-------------------------------------------------------L--ARV---------------------------------------------SS------------------------AFVT-----QVSQTMQIPFSYAEDII-----GVEGANIAYIRRRSGATITIK-ES-P---------------HPDQIT----------------------------------------VEI-----------------------------------------------KGT-TSQVQ----TAEQLI-----QEFIINHK-----------------------------------EPVSVSGGYARIDSGYVPAYPPQLSNRQEPLPSTYMGTE--------------------------------------PVQY--RPTAYSQLGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------PSTYTPTLTGQTYGSEYR-------------------PASDVGGYSSYNL [495] 'gi|78708635|gb|ABB47610.1| KH domain, putative [Oryza sativa (japonica cultivar-group)]' M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NSYCDKKEVTVAFSKTKRQEEDEVIW---------RMVEQGATDDEE-CGGTNCSAGENRDPGWPG--------TSVFRMLIPATKVGAVIGHSGERLRRLCEETKACVRVI---GGHF-AAAER-----------------AVIIFAKEQ--------------------------------------------------------------------------------------------PDEPKPP---AIDALLRVYECIINDD-------GLDVRYN---------NI----------------VVARILTPSEQAASLIGDQGSVINYIKKASKTNIHVI---------------------------------DG-DLPPVA--LEDDMII-----------------EIWGLPARVHQALELVACHLRK----YLVHRSVI------------------PLFDPH----------VSIPISPVDMPPFHYSDHHEGLLHEASPGYYSLYAEAFQLEHPWTDTSYSRYPMENFTHADIFEYRQEAPVFFGRYRSVTPPHYGHEAEAYLSSPMELCLHNNLNTYGWQATPPIGRSDTVERIRSLISVYGKQAHPHPLRQTYQ-STKM-----EKHP-----------HSGIS---LYRR--DDHPTRVSPSPATELPPSPAVSAYKWQVSPSLKMYPSTNVENLQHCRVSACAPEE-------LPNVVVPSLTSQ---------------------------------------------SP------------------------AVTS-----QVIMKMQVPIFYAEAVI-----GPTGARIDYIRQASGSSVVIK-DLDD-----------------SAMS----------------------------------------IEI-----------------------------------------------TGSAATDVQ----IAEQLI-----KNFMAEAA-----------------------------------A-----------------ASPDHSYDFIPSHLPAPRSPE--------------------------------------PDIPTTSLTRRASCFT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------EPRLQAT------------------------------------------Y [586] 'gi|37534332|ref|NP 921468.1| unknown protein [Oryza sativa (japonica cultivar-group)]' M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NSYCDKKEVTVAFSKTKRQEEDEVIW---------RMVEQGATDDEE-CGGTNCSAGENRDPGWPG--------TSVFRMLIPATKVGAVIGHSGERLRRLCEETKACVRVI---GGHF-AAAER-----------------AVIIFAKEQ--------------------------------------------------------------------------------------------PDEPKPP---AIDALLRVYECIINDD-------GLDVRYN---------NI----------------VVARILTPSEQAASLIGDQGSVINYIKKASKTNIHVIGNFLTLMHLLEPLVPSIDKFDISGLQLSIYTDADG-DLPPVA--LEDDMII-----------------EIWGLPARVHQALELVACHLRK----YLVHRSVI------------------PLFDPH----------VSIPISPVDMPPFHYSDHHEGLLHEASPGYYSLYAEAFQLEHPWTDTSYSRYPMENFTHADIFEYRQEAPVFFGRYRSVTPPHYGHEAEAYLSSPMELCLHNNLNTYGWQATPPIGRSDTVERIRSLISVYGKQAHPHPLRQTYQ-STKM-----EKHP-----------HSGIS---LYRR--DDHPTRVSPSPATELPPSPAVSAYKWQVSPSLKMYPSTNVENLQHCRVSACAPEE-------LPNVVVPSLTSQ---------------------------------------------SP------------------------AVTS-----QVIMKMQVPIFYAEAVI-----GPTGARIDYIRQASGSSVVIK-DLDD-----------------SAMS----------------------------------------IEI-----------------------------------------------TGSAATDVQ----IAEQLI-----KNFMAEAA-----------------------------------A-----------------ASPDHSYDFIPSHLPAPRSPE--------------------------------------PDIPTTSLTRRASCFT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------EPRLQAT------------------------------------------Y [619] 'gi|15217969|ref|NP 175569.1| nucleic acid binding [Arabidopsis thaliana] >gi|31711718|gb|AAP68215.1| At1g51580 [Arabidopsis tha' M----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EFSTSKRPATTATAAE--------SVHFRLLCPATRTGAIIGKGGSVIRHLQSVTGSKIRVI---DDIPVPSEER-----------------VVLIIAPSGKKKDESNVCDSENPGS-------------EEPKQEKGSECAGTSGGD---------------------------------------------DEEAPSS---AQMALLRVFERIVF---------GDDAATV---------DGDELDK-------GESEGLCRMIVRGNQVDYLMSKGGKMIQKIREDSGAIVRISS--------------------------------TD-QIPPCA--FPGDVVI-----------------QMNGKFSSVKKALLLVTNCLQE----S----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAPPTWDECPFPQPGYPPEYHSMEYHPQWDHPPPNPMPEDVGPFNRPVVEEEVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSD-PTHD--SEERIIVISARE-------------------------NLERRHSLAQDGVMRVHNRIVE------------------------IGFEPSA--AVVARLLVHSPYIGRLL-----GKGGHLISEMRRATGASIRVF-AKDQ---------------ATKYESQHDEI-----------------------------------VQV-----------------------------------------------IGN-LKTVQ----DALFQILCRLREAMFPG-------------------------------------------RLPFQGMGGPPPPFMGPYPEPPPPFGPRQYPAS--------------------------------------PDRYHSPVGPFHERHC----HGPGFDRPPGPGFDRPPSPMSWTPQPGIDGHPGGMVPPDVNHGFALRNEP------------------------------------------------------------------------IGSENPVMTSANVEIVIPQAYLGHVYGENCSNLNYIKQVSGANVVVHDPKAGTTEGLVVVSGTSDQAHFAQSLLHAFILCGQS-------------- [621] lcl|Ppa_FLK_9_1_unnamed_protein_product ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTQHMQIPLSYADAII-----GGAGANISYMRRTSGATITIQ-ETRS---------------VPGEMT----------------------------------------VEI-----------------------------------------------HGS-ASQVQ----TAQQLI-----QNFMAGAS-----------------------------------S------------------GPPQYSSTYSSTVDTSYSSY--------------------------------------PSQPAMYSTTPATVPP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TASYASH-----YSTSYG-------------------------------Y [123] 'gi|30685276|ref|NP 197031.3| nucleic acid binding [Arabidopsis thaliana] >gi|30685269|ref|NP 851040.1| nucleic acid binding [Ar' M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SPDHRMSPDHRDSHRKRSRPQSDYD----------------------------------DNGGSKRRYRGDDRDSLVIDRD--------DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIG---EAIP-GCDER-----------------VITIYSPSD----------------------------------------ETNAFGD---------------------------------------------GEKVLSP---AQDALFRIHDRV-V---------ADDARSE------------DSPE-------GEKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVK--------------------------------DR-NMPLCA--LNSDELI-----------------QISGEVLIVKKALLQIASRLHE----N-----------PSRSQN--------LLSSS---------------------------------------------------------------------------------------------------------------------------------------GGYPAGSLMSHAGGP-------------RLVGLAPLMGSYGRDAGD----W----------SRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKGGALINQLRQETRATIKVDS-SRTE--GNDCLITISARE-------------------------VFEDAYSPTIEAVMRLQPKCSD------------------------KVERDSGLVSFTTRLLVPSSRIGCIL-----GKGGAIITEMRRMTKANIRIL-GKEN---------------LPKVASDDDEM-----------------------------------VQI-----------------------------------------------SGE-LDVAK----EALIQITSRLRANVFDR--------------------------------------EGAVSALM------------------------PVLPYV--------------------------------------PVAPDAGDRFDYDS---------------RDSRRLERGNPYPGGY-GSSGVSA-EGYSPYG-A----------------------------------------------------------------------------------------PVGGSSSTPYGVYGGYASGRSSSSG---------------------------------------------LSSHSST---YRRRNYDY [548] 'gi|7671496|emb|CAB89337.1| putative protein [Arabidopsis thaliana]' M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SPDHRMSPDHRDSHRKRSRPQSDYD----------------------------------DNGGSKRRYRGDDRDSLVIDRD--------DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIG---EAIP-GCDER-----------------VITIYSPSD----------------------------------------ETNAFGD---------------------------------------------GEKVLSP---AQDALFRIHDRV-V---------ADDARSE------------DSPE-------GEKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVK--------------------------------DR-NMPLCA--LNSDELI-----------------QISGEVLIVKKALLQIASRLHE----N-----------PSRSQN--------LLSSS---------------------------------------------------------------------------------------------------------------------------------------GGYPAGSLMSHAGGP-------------RLVGLAPLMGSYGRDAGD----W----------SRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKGGALINQLRQETRATIKVDS-SRTE--GNDCLITISARE-------------------------VFEDAYSPTIEAVMRLQPKCSD------------------------KVERDSGLVSFTTRLLVPSSRIGCIL-----GKGGAIITEMRRMTKANIRIL-GKEN---------------LPKVASDDDEMVQVNFMVLLLKFSLQFLLSRLRYFTWSVNSNSNFDVQI-----------------------------------------------SGE-LDVAK----EALIQITSRLRANVFDR--------------------------------------EGAVSALM------------------------PVLPYV--------------------------------------PVAPDAGDRFDYDS---------------RDSRRLERGNPYPGGY-GSSGVSA-EGYSPYG-A----------------------------------------------------------------------------------------PVGGSSSTPYGVYGGYASGRSSSSG--------------------------------------------------------------- [568] 'gi|56783855|dbj|BAD81267.1| HEN4 -like [Oryza sativa (japonica cultivar-group)]' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSTDSCCEIRVSK----------------------------------DKLPLCA--LPRDELC-----------------QITGELDSVRKGLNTVAQLLFT----H-----------PPKESD--------VLGAHNSG----------------------------------------------------------------------------------------------------------------------------------SSRSFFNQPDVLPPGMQPNLHLP-FQGPNVAHLPNFP----------------------------EALMHGHGSVPPEPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLD-TVPK--SEDRIVFISGPA-------------------------HPGDGISPAQNAILHVQRKIVP------------------------TSNTKEG--PAICRLIVSPNQVGCLL-----GKGGSIIAEMRKLSGAHIIVL-SKDK---------------IPKGVPENDEV-----------------------------------VQI-----------------------------------------------SGA-SEAIQ----EALMQITARLRNHLFRD--------------------------------------RMASTVPNVQPPFGLVDPQFGSYAGNHDSISPRIFPNV-----PQFHKDFIGRPLDEMSAPWTMKGMQVVGDPISLPDIPGMAHRGMGGFPG-------------------------------------------------------------------------------------------------------------------------------PGQPSIVSTITADVMVPKLVLPSLCGEDGGCLNRIREFSGAKITVADPMGNAMDTAILISGTPDQMHAARSLIQAFVLSEPLAP------------ [449] 'gi|54290950|dbj|BAD61631.1| putative HEN4 [Oryza sativa (japonica cultivar-group)]' M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRPRSSKRGYH-----------------------------------YDQD---SPPPRSKPRFDRR----GGPNPNNS------YHRRGPPGGGGGDRRGGFQLPPDAAPPPPPPPPPSSAAAGGGGPGMTTSFRILCPQSK---VYGFPPSFIAKVRDDTNAVVTIH---LPYP-GDAVR-----------------VIETSDGAR------------------------------------------READG---------------------------------------------RPPSFSP---AQEALLMVHRRI-L-ETEPDDGDEDGEYGP---------RAKDARD-------RGK-VTTRLIVPRLHVGCLLGKGGKIIEQMRAETKTHIRILP--------------------------------RDQHTPRCV--SLSEEVV-----------------QVVGEGNCVKKAVAIISDRLKE----S-----------LHRDRG--------PFRGRMNS----------------------------------------------------------------------------------------------------------------------------------PEHRFPQEDEYYGGAQQMPAYEE-PYGRPDQIRNNTSMELPGYEFDSN--GGK---INDH--TE----------ILFDDIIFRILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLTD-SLDG--SDERIIIITSRE-------------------------GPDHELFPAQEALLHLQTHIVD------------------------LGPDKDN--IITTRLLVPSSEIACFE-----GRDGS-LSDIQRQTSANVQIL-PRQA---------------LPSCALESDEL-----------------------------------IQI-----------------------------------------------VGE-IRAAR----DALVQITAKLRSYFYRE--------------------------------------IPGPNQLGNITVHGSISPAKGSPRG-------PYQGSD--------------------------------------IPMPSYQQAQHVPASW-------------KDSGGGANMSFEQGSNINDDMRQ---SAAK------------------------------------------------------------------------------------RFAVPLVTRSTLEVVIPKSAVASLTMRAGSKLAQISEMSGATVTLADERPDAIEKVVRISGTPEQADKAQSLLQGFILSIQ--------DDIPSG- [662] lcl|Smo_FLK_3_1_unnamed_protein_product M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VPMAAGKRSYGHMLMNDPGTYPSSDTSKRHQSSFRRS------------------------------------DSSRGAAIPASQQQLIQQQQ--------EELFRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIA---DAIP-GSDER-----------------VIIIGAFDAEGGGDEDYPAGSGGGAPAAL---------------DKDDRAMDEYTN---------------------------------------------GRDVACP---AQLALFKVHSRILDADKY-----EDDLDDS---------DSVEEDL-------SEK-VVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILP--------------------------------RE-QLPVCA--LPTDEVV-----------------QVVGDRPSVKRALNAISTRLLD----N-----------PPKDRP--------SSASFQSGNFGGGS----------------------------------------------------------------------------------------------------------------------------RSSGFPASEPYIP-----------------QHTSLAPQTRLRAEPRSDSGDNGYQLLRPTAPGLSEFGTGRHLVPMDEELVFRILCPSEKIGNIIGK---FIQTLQEETGAKINVPD-AVPG--CEERVIIVSAVEVITGLVSFSRLLPPCDDEELFLSVQSPDDDLSPAQEAVFHIQDKLRD------------------------DGGETSE--RVVTRLLVPSNHVGCLL-----GKGGNIISEMRNSTRAIIRVL-DREQ---------------LPLCALDNDEVVQVWFCFSLSAFVCDATRSLD--------------FQV-----------------------------------------------LGE-IRVAR----DALVQITSRLRANLYREKT-----------------------------------DR--------------------------------------------------------------------------------------------------------SDDYGYQRSTSPLSNFGLQASQPPGIQAPRSPPSWLLQQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [596] 'gi|78708846|gb|ABB47821.1| RNA-binding protein, putative [Oryza sativa (japonica cultivar-group)]' M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DHDRSRRHKSNTSRKRPHFNSD-----------------------------------DGKRKRLNSRHDDGTISSEPI--------ETIYRILCPVKKIGSVLGRGGDIVKALRDTTKAKIRVA---DSIP-GADER-----------------VIIIFNYSS-----------------------------------QTEEAAQNISTD---------------------------------------------GFEDMKPHCFAQDALLKIHDKIAA---------DEDLHAG---------IVHEKSE-------NVDDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRVLP--------------------------------SE-NLPQCA--LKSDELV-----------------QISGSSSLVRKALYEISTRLHQ----H-----------PRKDNP--------PLEEIIDA----------------------------------------------------------------------------------------------------------------------------------STQRKHQAPPQLPHANPMLPH---------LHVDHSPQIPLLDPYRN--------------------RPLQYHSAEAEEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNA--SEERLIVVSSQE-------------------------IPDDPVSPTIEALILLHSKV--------------------------STLAENH--HLTTRLVVPSNKVGCII-----GEGGKVITEMRRRTGAEIRVY-SKAD---------------KPKYLSFDEEL-----------------------------------VQV-----------------------------------------------AGL-PAIAR----GALTEIASRLRTRTLRD--------------------------------------GSSSNNPTPFAPFDGPPVDILPNREFMLYGRSANSPPYGGPPNDPPYGRPAIDPPYGRPAIDPPYGRPAIDPPYRRPANDTSYGGLNNDGPRDPYTAYPVEYFSKREYPSGNSKVTPSASY----------DRYAATTRLPNRELPSSISPGADYMSRRSYLDQVPTDRYSSRGTLQLGLSRAGNSNVQQLGITRAGNSNAYDYTEVHFQCVSLPLLCKWPSPDMFPLET------------------------------------------------------------------------------------- [677] 'gi|37535668|ref|NP 922136.1| putative RNA-binding protein [Oryza sativa (japonica cultivar-group)] >gi|22128716|gb|AAM92828.1|' M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DHDRSRRHKSNTSRKRPHFNSD-----------------------------------DGKRKRLNSRHDDGTISSEPI--------ETIYRILCPVKKIGSVLGRGGDIVKALRDTTKAKIRVA---DSIP-GADER-----------------VIIIFNYSS-----------------------------------QTEEAAQNISTD---------------------------------------------GFEDMKPHCFAQDALLKIHDKIAA---------DEDLHAG---------IVHEKSE-------NVDDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRVLP--------------------------------SE-NLPQCA--LKSDELV-----------------QISGSSSLVRKALYEISTRLHQ----H-----------PRKDNP--------PLEEIIDA----------------------------------------------------------------------------------------------------------------------------------STQRKHQAPPQLPHANPMLPH---------LHVDHSPQIPLLDPYRN--------------------RPLQYHSAEAEEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNA--SEERLIVVSSQE-------------------------IPDDPVSPTIEALILLHSKV--------------------------STLAENH--HLTTRLVVPSNKVGCII-----GEGGKVITEMRRRTGAEIRVY-SKAD---------------KPKYLSFDEEL-----------------------------------VQV-----------------------------------------------AGL-PAIAR----GALTEIASRLRTRTLRD--------------------------------------GSSSNNPTPFAPFDGPPVDILPNREFMLYGRSANSPPYGGPPNDPPYGRPAIDPPYGRPAIDPPYGRPAIDPPYRRPANDTSYGGLNNDGPRDPYTAYPVEYFSKREYPSGNSKVTPSASY----------DRYAATTRLPNRELPSSISPGADYMSRRSYLDQVPTDRYSSRGTLQLGLSRAGNSNVQQLGITRAGNSNAYDYTEAAEQIHGREDYRRLSGLTGYPGGSVEFRIPNSYLESVIGAGGVNLAEIRQISGARVKLHEAHPGSSESIVEIQGIPDQVKAAQSLLQGFIGASSNSRQAPQSSRMAHYF [762] 'gi|50920709|ref|XP 470715.1| putative nucleic acid binding protein [Oryza sativa] >gi|18921324|gb|AAL82529.1| putative nucleic' M----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VGPGHRNSHGKR---HSDYA----------------------------------ENGGGKRRNPGD--DTYAPGPD--------DTVYRYLCPSRKIGSIIGRGGEIAKQMRADTQAKIRIG---ESVS-GCDER-----------------VITIFSSSR----------------------------------------ETNTLVD---------------------------------------------AEDKVCP---AQDALFRVHEKLSI---------DDDIGNE------------ESDE-------GLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLS--------------------------------NE-NLPACA--ISGDELL-----------------QISGDSTVVRKALLQVSSRLHD----N-----------PSRSQH--------LLASS-------------------------------------------------------------------------------------------------------------------------------------MTQPYPVGSHLGSSSTA-------------PVVGITPLISSYGGYKGDVAGDW----------P-SIYQPRREESSAKEFSLRLLCAASNVGGVIGKGGGIIKQIRQESGAFIKVDS-SNTE---DDCIITVSAKE-------------------------FFEDPVSPTINAAVHLQPRCSE------------------------KTDPESAIPSYTTRLLVSTSRIGCLI-----GKGGSIITEIRRTSRANIRIL-SKEN---------------VPKVAAEDEEM-----------------------------------VQI-----------------------------------------------SGD-LDVVR----HALLQITTRLKANFFER--------------------------------------EGALSGFP------------------------PVIPYH--------------------------------------PLPVGVSEGPKYLG---------------RDTKPLGHDYPYSSGYRGSDDIGPIDSYASYGSS----------------------------------------------------------------------------------------QVSGGG---YGAYGGYS-GRSGSSG---------------------------------------------LSGPSSF---SYGKRHGY [542] 'gi|53749469|gb|AAU90323.1| putative KH domain containing protein [Solanum demissum]' M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGQRNNYGKRMQSESDYS----------------------------------RSDGSKRRTPTDEKESNSIGPE--------DTVFRYLCPTGKIGSIIGVGGDIAKQLRTETNSKIRIS---ETIP-GCEER-----------------VVTIYSGSE----------------------------------------ETNVSED---------------------------------------------TGDLISP---AQDALFRVHDRVL----------AEDLRMD------------EDLE-------DHQQITVRMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVLS--------------------------------SE-HLPPCA--LNSDELL-----------------QITGEGAVVKKALYQVAARLHD----N-----------PSRSQH--------QLLSS-------------------------------------------------------------------------------------------------------------------------------------PSIFRSGAGFVNPHAGT-------------QVMGVTSLMGPYASYKSD---------------------GRSKSSSVKEFAVRLVCPTENVGAVIGKGGGIIKQLRQESGASIKVDS-AAAE--GDDCIIFVSAKE-------------------------AFEDQ-SPTIDATMRLQPRSSE------------------------KTEKESGDAILTTRLLVPSSRVGCLI-----GKGGSIINEMRNSTRASIRVL-SKEN---------------LPKVASEDDEM-----------------------------------VQI-----------------------------------------------TGD-ANVAT----NALLQVLMRLRANTFEM--------------------------------------EGSFPAFS------------------------PGLSYV--------------------------------------PMSASMPDGSRYGN---------------RDNRSRRHGYSSYSGGHDYNDLSPSDSYG---------------------------------------------------------------------------------------------GSQVGGGGNYAPYGVYSSGRPSSAG---------------------------------------------VSSHNPS---AYGKSYGY [533] 'gi|56744290|gb|AAW28569.1| putative KH domain containing protein [Solanum demissum]' M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGQRNNYGKRMQSESDYS----------------------------------RSDGSKRRTPTDEKESNSIGPE--------DTVFRYLCPTGKIGSIIGVGGDIAKQLRTETNSKIRIS---ETIP-GCEER-----------------VVTIYSGSE----------------------------------------ETNVSED---------------------------------------------TGDLISP---AQDALFRVHDRVL----------AEDLRMD------------EDLE-------DHQQITVRMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVLS--------------------------------SE-HLPPCA--LNSDELL-----------------QITGEGAVVKKALYQVAARLHD----N-----------PSRSQH--------QLLSS-------------------------------------------------------------------------------------------------------------------------------------PSIFRSGAGLVNPHAGT-------------QVMGVTSLMGPYASYKSD---------------------GRSRSSSVKEFAVRLVCPTENVGAVIGKGGGIIKQLRQESGASIKVDS-AAAE--GDDCIIFVSAKE-------------------------AFEDQ-SPTIDATMRLQPRSSE------------------------KTEKESGDAILTTRLLVPSSRVGCLI-----GKGGSIINEMRNSTRASIRVL-SKEN---------------LPKVASEDDEM-----------------------------------VQI-----------------------------------------------TGD-ANVAA----NALLQVLMRLRANTFEM--------------------------------------EGSFPAFS------------------------PGLSYV--------------------------------------PMSASMPDGSRYGN---------------RDNRSRRHSHSSYSGGHDYNDLSPSDSYG---------------------------------------------------------------------------------------------GSQVGGGGNYAPYGVYSSGRPSSAGPLPAPFDEASSLRTEDQTNKIEKLVAILALLKMHAKHTYYVKLKRLDGHNRTPFVALKVNSVC [581] lcl|Ppa_FLK_2_1_unnamed_protein_product M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRGYNGKRPHPLYDGDFPDRNGRQ-----------KRRNEGSYSSRELGGGQFVSRDLP---LPMVAANLAD--------DVVFRILCPAPKIGSVIGKGGSIIKTLRQESGAKIKIA---DAIP-GVDER-----------------VILISSTDRGNDRGRGKDGSGRESRSGVRGRDGRSRERDGGKEGDKKDTERDSAQR---------------------------------------------DSEELTP---AQEALFKVHARIIADV--------ETSGID---------GSDQEEE-------PSQQVVTRLLVPNNQIGCLLGKGGKIIEQMRQTTGAQIRVLP--------------------------------KD-QLPGCA--LPTDELV-----------------QVSGDVSTLKKALLFISARLQE----N-----------PPRDRP--------QSYAAPAPAFV-------------------------------------------------------------------------------------------------------------------------------PVTDYLAKDSYRSKGTG-------------HVFGLGPEPLEGRSWTISSGNLS-------LDRQDNRRSKEGRDSGENELVFRLLCPSDKIGSVIGKGGSIIHNLRKDTGARIKIAN-AVPG--SDERVIIVSALE-------------------------LPGDSFSPALEAMIQVQSRITAE-----------------------MGGDKDG--IITTRLLVPTNQIGCLL-----GKGGSIIEDMRRATRANIRVL-PKDT---------------LPRCALDTDEL-----------------------------------VQLSRDFKIDYICHECYYFNYISALANVRRSRFGHRKKRENHIDVYEMQIVGD-TTVAR----EALFQVISRLRNNAFRESG-----------------------------------SETGRGGGGGRDFGHSMPPLSMSRESYSSSYDFG?----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [603] 'gi|8809595|dbj|BAA97146.1| RNA-binding protein-like [Arabidopsis thaliana]' M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERSR-SKRNYH-----------------------------------YDQDYDGDSMPRSKPRYNNNYHFGGGGGGNNR------Y--RGGGGGGGGNGR-------------PSKSHPETMA--------TTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVH---ELVP-GDAER-----------------IIEISDNRR------------------------------------------RDPDG---------------------------------------------RMPSFSP---AQEALFSVHDRI-L-ESEA----QFGYGGP---------PPEEEEDYGGVRPGGGR-VVTRLVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILP--------------------------------RESNLPRCV--SLSEEIV-----------------QIVGELNAVKNALAIVSSRLRE----S-----------QHRDRS--------NFQGRSHS----------------------------------------------------------------------------------------------------------------------------------PERSFAAAGDDY-----MP-----------QLRRQSSDRFPRGNFRNNNFSSR---QSNY--AEEAPAVPVGENVYSEELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSD-PVAG--SDEQIITISSEE-------------------------APDDPFFPAQEALLHIQTQIID------------------------LIPDKDN--LITTRLLVPSRDSICLE-----GKAGS-VSEISRLTGTSVQIL-AREE---------------IPRCASINDVV-----------------------------------IQI-----------------------------------------------TGE-IRAAR----EALVELTLLLRSHMFKE--------------------------------------LS----------QKETPPASTSTTG-------PLEGVA--------------------------------------GVMEVASSNNTIQS---------------REGPTSSNLNLQQVSTILPQFKEGFGSVAKAGESEHREEVPVTT---------------------------------------------------------------------SRMAVPLVTRSTLEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTIVEDRPEETQNIIRISGTPEQAERAQSLLQGFILSSKFLSFQTFISVLY--- [660] 'gi|30696273|ref|NP 200118.3| nucleic acid binding [Arabidopsis thaliana] >gi|30725478|gb|AAP37761.1| At5g53060 [Arabidopsis tha' M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERSR-SKRNYH-----------------------------------YDQDYDGDSMPRSKPRYNNNYHFGGGGGGNNR------Y--RGGGGGGGGNGR-------------PSKSHPETMA--------TTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVH---ELVP-GDAER-----------------IIEISDNRR------------------------------------------RDPDG---------------------------------------------RMPSFSP---AQEALFSVHDRI-L-ESEA----QFGYGGP---------PPEEEEDYGGVRPGGGR-VVTRLVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILP--------------------------------RESNLPRCV--SLSEEIV-----------------QIVGELNAVKNALAIVSSRLRE----S-----------QHRDRS--------NFQGRSHS----------------------------------------------------------------------------------------------------------------------------------PERSFAAAGDDY-----MP-----------QLRRQSSDRFPRGNFRNNNFSSR---QSNY--AEEAPAVPVGENVYSEELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSD-PVAG--SDEQIITISSEE-------------------------APDDPFFPAQEALLHIQTQIID------------------------LIPDKDN--LITTRLLVPSRDSICLE-----GKAGS-VSEISRLTGTSVQIL-AREE---------------IPRCASINDVV-----------------------------------IQI-----------------------------------------------TGE-IRAAR----EALVELTLLLRSHMFKE--------------------------------------LS----------QKETPPASTSTTG-------PLEGVA--------------------------------------GVMEVASSNNTIQS---------------REGPTSSNLNLQQVSTILPQFKEGFGSVAKAGESEHREEVPVTT---------------------------------------------------------------------SRMAVPLVTRSTLEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTIVEDRPEETQNIIRISGTPEQAERAQSLLQGFILSIQ--------EDGP--- [652] 'gi|21753335|dbj|BAC04327.1| unnamed protein product [Homo sapiens]' MGE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GDAFWAPSVLPHSTLSTLSHHPQPQFGRRMESKV-SEGGLNV--------TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS---EG---NCPER-----------------IVTITGPTD---------------------------------------------------------------------------------------------------------AIFKAFAMIAYKF-------EEDIINS---------MSNSPAT-------SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAV-----------------TISGTPDAIIQCVKQICVVMLE----S---P---------------------P--------KG--ATIPYRPKPASTPVIFAGG-------------------Q----------------------------------------------------------------------------------------------AYTIQGQY-AIPHPDQLTKLHQLAMQQTPFPPLGQ-TNP-AFP--------------------GLDASPP------------------------------------------------------------------------------------------------------------------------------------------ASTHELTIPNDLIGCII-----GRQGTKINEIRQMSGAQIKIA-NATE---------------GSSERQ----------------------------------------ITI-----------------------------------------------TGT-PANIS----LAQYLINARLTS------------------------------------------------------------------------------------------------------------------EVTGMGTL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [351] 'gi|50927011|gb|AAH79196.1| Poly(rC) binding protein 3 (predicted) [Rattus norvegicus] >gi|58865460|ref|NP 001011945.1| poly(rC)' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MESKV-SEGGLNV--------TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS---EG---NCPER-----------------IVTITGPTD---------------------------------------------------------------------------------------------------------AIFKAFAMIAYKF-------EEDIINS---------MSNSPAT-------SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAV-----------------TISGTPDAIIQCVKQICVVMLE----S---P---------------------P--------KG--ATIPYRPKPASTPVIFAGG-------------------Q----------------------------------------------------------------------------------------------AYTIQGQY-AIPHPDQLTKLHQLAMQQTPFPPLGQ-TNP-AFP--------------------GLDASPP------------------------------------------------------------------------------------------------------------------------------------------ASTHELTIPNDLIGCII-----GRQGTKINEIRQMSGAQIKIA-NATE---------------GSSERQ----------------------------------------ITI-----------------------------------------------TGT-PANIS----LAQYLINARLTS------------------------------------------------------------------------------------------------------------------EVTGMGAL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [319] 'gi|56566054|gb|AAV98363.1| poly(rC) binding protein 3 [Homo sapiens]' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MESKV-SEGGLNV--------TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS---EG---NCPER-----------------IVTITGPTD---------------------------------------------------------------------------------------------------------AIFKAFAMIAYKF-------EEDIINS---------MSNSPAT-------SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAV-----------------TISGTPDAIIQCVKQICVVMLE----S---P---------------------P--------KG--ATIPYRPKPASTPVIFAGG-------------------QVRADPLAASTAN---------------LSLLLQHP--------------------------------------------------------PLPAYTIQGQY-AIPHPD-LTKLHQLAMQQTPLPPLGQ-TNP-AFPGEKLPLHSSEEAQNLMGQSSGLDASPP------------------------------------------------------------------------------------------------------------------------------------------ASTHELTIPNDLIGCII-----GRQGTKINEIRQMSGAQIKIA-NATE---------------GSSERQ----------------------------------------ITI-----------------------------------------------TGT-PANIS----LAQYLINARLTS------------------------------------------------------------------------------------------------------------------EVTGMGTL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [361] 'gi|26330216|dbj|BAC28838.1| unnamed protein product [Mus musculus]' MGE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GDAIWAPPILPHSTLGTLSHHPELHFGGKMESKV-SEGGLNV--------TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS---EG---NCPER-----------------IVTITGPTD---------------------------------------------------------------------------------------------------------AIFKAFAMIAYKF-------EEDIINS---------MSNSPAT-------SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAV-----------------TISGTPDAIIQCVKQICVVMLE----S---P---------------------P--------KG--ATIPYRPKPASTPVIFAGG-------------------Q----------------------------------------------------------------------------------------------AYTIQGQY-AIPHPD-LTKLHQLAMQQTPFPPLGQ-TNP-AFPGEKLPLHSSEEAQNLMGQSSGLDASPP------------------------------------------------------------------------------------------------------------------------------------------ASTHELTIPNDLIGCII-----GRQGTKINEIRQMSGAQIKIA-NATE---------------GSSERQ----------------------------------------ITI-----------------------------------------------TGT-PANIS----LAQYLINARLTS------------------------------------------------------------------------------------------------------------------EVTGMGAL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [370] 'gi|50942071|ref|XP 480563.1| putative KH domain protein [Oryza sativa (japonica cultivar-group)] >gi|38636959|dbj|BAD03220.1| p' ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSFDNFV-----------------QITGDARAVRKALFAVSTIIYK----C-----------PSKETI--------PLETSVSDLP-PSIIVPSEL--PV----------------------------------------------------------------------------------------------------------------YPSSNFYSPSDAAISSGHPSL-----------SILGSTPHVPELTVSADAHSRLP---IY-Q--SVLPVIPAYNTPKCSGELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDD-SKND--REESIITITSNE-------------------------ATDDAKSAAVEAVLLLQSKIND------------------------DNEG-----KMNLRLLVPGKVIGCLI-----GKGGSIVNDMRSKTKAAIYIS-KGEK----------------PRKASSSDEL-----------------------------------VEV-----------------------------------------------FGE-VENLR----DALVQIVLRLRDDVLRDSV-----------------------------------DRQNSEKDGKLTVATTDPLYASS-----YPLP-ALLPYR--------------------------------------QQITPLGYDH-----R-------------GDIERGLEVYPHS-SLYGYSSLQAIDDGYSAVSSYA-----------------------------------------------------------------------------SKGYGGRPPH--MEMTIPASGLSKVMGKHGTNLDNIIKISGAHIEIIESKSSRHGHVARISGTTEQKQSAENLIKAFIMST---------------- [441] 'gi|50736109|ref|XP 419049.1| PREDICTED: similar to Poly(rC)-binding protein 3 (Alpha-CP3) [Gallus gallus]' MNP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KDSKV-SEGGLNV--------TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS---EG---SCPER-----------------IVTITGPTD---------------------------------------------------------------------------------------------------------AIFKAFSMIALKF-------EEDINAS---------MTNSTVT-------SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAV-----------------TISGTPDAIIQCVKQICVVMLE----S---P---------------------P--------KG--ATIPYRPKPASAPIIFAGG-------------------QVRADTILASAGN---------------HTVLAQPQ--------------------------------------------------------PAPAFTIQGQY-AIPHPD-LTKLHQLAMQHPPFTPLGQ-TTP-GFP--------------------GLDATSP------------------------------------------------------------------------------------------------------------------------------------------TSSHELTIPNDLIGCII-----GRQGSKINEIRQMSGAQIKIA-NATE---------------GSAERQ----------------------------------------VTI-----------------------------------------------TGS-PANIS----LAQYLINAR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [333] 'gi|62665831|ref|XP 574735.1| PREDICTED: poly(rC) binding protein 3 (predicted) [Rattus norvegicus]' MGE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GDAIWAPSILPHSTLSTLSHHPELHFGGKMESKV-SEGGLNV--------TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS---EG---NCPER-----------------IVTITGPTD---------------------------------------------------------------------------------------------------------AIFKAFAMIAYKF-------EEDIINS---------MSNSPAT-------SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAV-----------------TISGTPDAIIQCVKQICVVMLE----S---P---------------------P--------KG--ATIPYRPKPASTPVIFAGG-------------------Q----------------------------------------------------------------------------------------------AYTIQGQY-AIPHPDQLTKLHQLAMQQTPFPPLGQ-TNP-AFPGEKLPLHSSEEAQNLMGQSSGLDASPP------------------------------------------------------------------------------------------------------------------------------------------ASTHELTIPNDLIGCII-----GRQGTKINEIRQMSGAQIKIA-NATE---------------GSSERQ----------------------------------------ITI-----------------------------------------------TGT-PANIS----LAQYLINARLTS------------------------------------------------------------------------------------------------------------------EVTGMGAL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [371] 'gi|26348076|dbj|BAC37686.1| unnamed protein product [Mus musculus]' MGE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GDAIWAPPILPHSTLGTLSHHPELHFGGKMESKV-SEGGLNV--------TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS---EG---NCPER-----------------IVTITGPTD---------------------------------------------------------------------------------------------------------AIFKAFAMIAYKF-------EEDIINS---------MSNSPAT-------SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAV-----------------TISGTPDAIIQCVKQICVVMLE----S---P---------------------P--------KG--ATIPYRPKPASTPVIFAGG-------------------Q----------------------------------------------------------------------------------------------AYTIQGQY-AIPHPDQLTKLHQLAMQQTPFPPLGQ-TNP-AFPGEKLPLHSSEEAQNLMGQSSGLDASPP------------------------------------------------------------------------------------------------------------------------------------------ASTHELTIPNDLIGCII-----GRQGTKINEIRQMSGAQIKIA-NATE---------------GSSERQ----------------------------------------ITI-----------------------------------------------TGT-PANIS----LAQYLINARLTS------------------------------------------------------------------------------------------------------------------EVTGMGAL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [371] 'gi|46577695|sp|P57722|PCBP3 MOUSE Poly(rC)-binding protein 3 (Alpha-CP3)' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MESKV-SEGGLNV--------TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS---EG---NCPER-----------------IVTITGPTD---------------------------------------------------------------------------------------------------------AIFKAFAMIAYKF-------EEDIINS---------MSNSPAT-------SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAV-----------------TISGTPDAIIQCVKQICVVMLE----S---P---------------------P--------KG--ATIPYRPKPASTPVIFAGG-------------------Q----------------------------------------------------------------------------------------------AYTIQGQY-AIPHPDQLTKLHQLAMQQTPFPPLGQ-TNP-AFPGEKLPLHSSEEAQNLMGQSSGLDASPP------------------------------------------------------------------------------------------------------------------------------------------ASTHELTIPNDLIGCII-----GRQGTKINEIRQMSGAQIKIA-NATE---------------GSSERQ----------------------------------------ITI-----------------------------------------------TGT-PANIS----LAQYLINARLTS------------------------------------------------------------------------------------------------------------------EVTGMGAL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [339] 'gi|10092617|ref|NP 065389.1| poly(rC) binding protein 3 [Homo sapiens] >gi|9957165|gb|AAG09240.1| alphaCP-3 [Homo sapiens] >gi|' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MESKV-SEGGLNV--------TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS---EG---NCPER-----------------IVTITGPTD---------------------------------------------------------------------------------------------------------AIFKAFAMIAYKF-------EEDIINS---------MSNSPAT-------SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAV-----------------TISGTPDAIIQCVKQICVVMLE----S---P---------------------P--------KG--ATIPYRPKPASTPVIFAGG-------------------Q----------------------------------------------------------------------------------------------AYTIQGQY-AIPHPDQLTKLHQLAMQQTPFPPLGQ-TNP-AFPGEKLPLHSSEEAQNLMGQSSGLDASPP------------------------------------------------------------------------------------------------------------------------------------------ASTHELTIPNDLIGCII-----GRQGTKINEIRQMSGAQIKIA-NATE---------------GSSERQ----------------------------------------ITI-----------------------------------------------TGT-PANIS----LAQYLINARLTS------------------------------------------------------------------------------------------------------------------EVTGMGTL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [339] 'gi|10947014|ref|NP 067543.1| poly(rC) binding protein 3 [Mus musculus] >gi|9957161|gb|AAG09238.1| alphaCP-3 [Mus musculus]' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MESKV-SEGGLNV--------TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS---EG---NCPER-----------------IVTITGPTD---------------------------------------------------------------------------------------------------------AIFKAFAMIAYKF-------EEDIINS---------MSNSPAT-------SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAV-----------------TISGTPDAIFQCVKQICVVMLE----S---P---------------------P--------KG--ATIPYRPKPACTPVIFAGG-------------------Q----------------------------------------------------------------------------------------------AYTIQGQY-AIPHPDQLTKLHQLAMQQTPFPPLGQ-TNP-AFPGEKLPLHSSEEAQNLMGQSSGLDASPP------------------------------------------------------------------------------------------------------------------------------------------ASTHELTIPNDLIGCII-----GRQGTKINEIRQMSGAQIKIA-NATE---------------GSSERQ----------------------------------------ITI-----------------------------------------------TGT-PANIS----LAQYLINARLTS------------------------------------------------------------------------------------------------------------------EVTGMGAL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [339] 'gi|54037961|gb|AAH84195.1| HnRNP-E2 protein [Xenopus laevis]' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDTSV-IEGGLNV--------TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS---EG---NCPER-----------------IITLAGPTN---------------------------------------------------------------------------------------------------------AIFKAFSMIIDKL-------EEDISSS---------MTNSTAS-------SKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAI-----------------TIAGIPQSIIECVKQICVVMLE----S---P---------------------P--------KG--VTIPYRPKPSSSPVIFAGG-------------------QVSRQAGGHACETDLWEGRRSHTGGVSLDAVDLHG------------------------------------------------------------AYIIQGQY-AIPQPD-LTKLHQLAMQQSHF-PMSHSGNT-GFS-------------------GGIDASAQ------------------------------------------------------------------------------------------------------------------------------------------TTSHELTIPNDLIGCII-----GRQGAKINEIRQMSGAQIKIA-NPVE---------------GSNDRQ----------------------------------------VTI-----------------------------------------------TGS-TASIS----LAQYLINVRLSS------------------------------------------------------------------------------------------------------------------EAGGMGSS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [353] 'gi|34904418|ref|NP 913556.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]' M----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GVHLMTARPTTPARAAAAVEAPVVHGNWELSASFLLLSVSFYTSWARHLMGVVAGEDMASRSTPSKRPFQKNSSEQNGRGKWQKTKHNSLQQPQLIVQPG--------VPIFRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVD---EVVP-GCDER-----------------VIVITAIDKDREVSHVQTKENDGGVACSVDGNHGMEKDHTKEEKDESNKEMDDSEKGLGKEEKDDLEKDHDKEDRDESGKDNDKKADDSSVAKDTNSEPEAQLELEKGMPLAVKAILLVFDRIFVNEMEN--------------------GTGDASG-------ERNHVSLRLLVLDSQVGWLLGKNGSVIKQMSTDSCCEIRVSK----------------------------------DKLPLCA--LPRDELCQILHQKIITYSLHISFLQITGELDSVRKGLNTVAQLLFT----H-----------PPKESD--------VLGAHNSG----------------------------------------------------------------------------------------------------------------------------------SSRSFFNQPDVLPPGMQPNLHLP-FQGPNVAHLPNFP----------------------------EALMHGHGSVPPEPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLD-TVPK--SEDRIVFISGPA-------------------------HPGDGISPAQNAILHVQRKIVP------------------------TSNTKEG--PAICRLIVSPNQVGCLL-----GKGGSIIAEMRKLSGAHIIVL-SKDK---------------IPKGVPENDEV-----------------------------------VQI-----------------------------------------------SGA-SEAIQ----EALMQITARLRNHLFRD--------------------------------------RMASTVPNVQPPFGLVDPQFGSYAGNHDSISPRIFPNV-----PQFHKDFIGRPLDEMSAPWTMKGMQVVGDPISLPDIPGMAHRGMGGFPG-------------------------------------------------------------------------------------------------------------------------------PGQPSIVSTITADVMVPKLVLPSLCGEDGGCLNRIRSDHGLVELLVMMIVWAMKLVTLCVHIYEYACPVCRLAYGRRG------------------ [774] 'gi|73985369|ref|XP 533807.2| PREDICTED: similar to Poly(rC)-binding protein 4 (Alpha-CP4) isoform 1 [Canis familiaris]' MSG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDAGLEEEPELSI--------TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITIS---EG---SCPER-----------------ITTITGSTA---------------------------------------------------------------------------------------------------------AVFHAVSMIAFKL-------DEDLCAA---------PANGGNV-------SRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAG--------------------------------------DLLP-NSTERAV-----------------TVSGVPDAIILCVRQICAVILE----S---P---------------------P--------KG--ATIPYHPSLSLGTVLLSANQVRWNMTGHSNPSSPVLSPQ----------------------------------------------------------------------------------------------GFSVQGQYGAVTPAE-VTKLQQLSGHAVPF------ASP-SMV-------------------PGLDPGAQ------------------------------------------------------------------------------------------------------------------------------------------TSSQEFLVPNDLIGCVI-----GRQGSKISEIRQMSGAHIKIG-NQAE---------------GAGERH----------------------------------------VTI-----------------------------------------------TGS-PVSIA----LAQYLITACLETAKSTSGG-----------------------------------TPGSAPTDLPAPFSPPLTALPTAPPGLLG------------------TPYAISLSNFIGLKPVPFLALPPASPGPPPGLAAYTAKMAAANGSKKAERQK----------------------------FSP-Y---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [422] 'gi|49250542|gb|AAH74565.1| Poly(rC) binding protein 2 [Xenopus tropicalis] >gi|53749712|ref|NP 001005451.1| poly(rC) binding pr' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDTGV-IEGGLNV--------TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS---EG---NCPER-----------------IITLAGPTN---------------------------------------------------------------------------------------------------------AIFKAFSMIIDKL-------EEDISSS---------MTNSTAS-------SKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAI-----------------TIAGIPQSIIECVKQICVVMLE----S---P---------------------P--------KG--VTIPYRPKPSSSPVIFAGG-------------------QVSRQAGGHACETDLWEGRRSHTGGVSLDAVDLHG------------------------------------------------------------AYTIQGQY-AIPQPD-LTKLHQLAMQQSHF-PMSHSGNT-GFS-------------------GGIDASAQ------------------------------------------------------------------------------------------------------------------------------------------TTSHELTIPNDLIGCII-----GRQGAKINEIRQMSGAQIKIA-NPVE---------------GSNDRQ----------------------------------------VTI-----------------------------------------------TGS-TASIS----LAQYLINVRLSS------------------------------------------------------------------------------------------------------------------EAGGMGSS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [353] 'gi|27370875|gb|AAH41241.1| Hnrnp-e2 protein [Xenopus laevis]' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDTGV-IEGGLNV--------TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS---EG---NCPER-----------------IITLAGPTN---------------------------------------------------------------------------------------------------------AIFKAFSMIIDKL-------EEDISSS---------MTNSTAS-------SKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAI-----------------TIAGIPQSIIECVKQICVVMLE----S---P---------------------P--------KG--VTIPYRPKPSSSPVIFAGG-------------------QVSRQAGGHACETDLWEGRRSHTGGVSLDAVDLHG------------------------------------------------------------AYTIQGQY-AIPQPD-LTKLHQLAMQQSHF-PMSHSGNT-GFS-------------------GGIDASAQ------------------------------------------------------------------------------------------------------------------------------------------ATSHELTIPNDLIGCII-----GRQGAKINEIRQMSGAQIKIA-NPVE---------------GSNDRQ----------------------------------------VTI-----------------------------------------------TGS-TASIS----LAQYLINVRLSS------------------------------------------------------------------------------------------------------------------EAGGMGSS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [353] 'gi|5459450|emb|CAB50743.1| hnRNP-E2 protein [Xenopus laevis]' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDTSV-IEGGLNV--------TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS---EG---NCPER-----------------IITLAGPTN---------------------------------------------------------------------------------------------------------AIFKAFSMIIDKL-------EEDISSS---------MTNSTAS-------SKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAI-----------------TIAGIPQSIIECVKQICVVMLE----S---P---------------------P--------KG--VTIPYRPKPSSSPVIFAGG-------------------QVSRQAGGHACETDLWEGRRSHTGGVSLDAVDLHG------------------------------------------------------------AYTIQGQY-AIPQPD-LTKLHQLAMQQSHF-PMSHSGNT-GFS-------------------GGIDASAQ------------------------------------------------------------------------------------------------------------------------------------------TTSHELTIPNDLIGCII-----GRQGAKINEIRQMSGAQIKIA-NPVE---------------GSNDRQ----------------------------------------VTI-----------------------------------------------TGS-TASIS----LAQYLINVRLSS------------------------------------------------------------------------------------------------------------------EAGGMGSS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [353] 'gi|55656181|ref|XP 531502.1| PREDICTED: hypothetical protein XP 531502 [Pan troglodytes]' MCP--------------EDYSAYDFGKLGIPAFDSSELVVVEHLWVQCQARWFSHSLPALPWSQPREAKEAQVSGMKDKKAVLGAEDRPEVFGKRPVPALSAPSGIVHREQHSWTPAKIVRGCVTAQSKTGTMQTAGEMDSPSLHRQLHTRDAAVPLRPAATPPLSVAVGAGLMTVFGLHSEAAGSDPSEQGRSVPPLALTGLLVALSQRLLLPILGPVEAPAPVPLLPLGCSFPVTPSAPPFTSAVAWYLLLVRNSLILQFTRTCKSITSQAQVSPAVRVGTCFMPTPPMADRRQQQQKLAAPPWTPPRPLGHPGVIFSSSFSSFLLFRLGPYCDLRSAEDPGRWPAPWGSTVQGSREAGSCVSCFPPPQPSMETLMTAACSLVRPDPPGQGRGVWKEKQVAPYLQSLLEAAVPEPNRATRMQNQLKRGQGHCPLPALGASMAATIFLVPRPLTLWEEASPDLPLSSEPQFHGGKWSSLLSVQALEPALGLRSQCPCHCVAVGMVQPACGFGIPSRHCVGPCGFRCPCPLCCCSLLLASGCVTSSGVALDSRESVQVPNREWLEAGVLQECLGQPPVQTVSHLQTMAVPTAPHPRCRVGTEESTLSALSHHPQPQFGRRMESKV-SEGGLNV--------TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS---EG---NCPER-----------------IVTITGPTD---------------------------------------------------------------------------------------------------------AIFKAFAMIAYKF-------EEDIINS---------MSNSPAT-------SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAV-----------------TISGTPDAIIQCVKQICVVMLE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AYTIQGQY-AIPHPDQLTKLHQLAMQQTPFPPLGQ-TNP-AFPGEKLPLHSSEEAQNLMGQSSGLDASPP------------------------------------------------------------------------------------------------------------------------------------------ASTHELTIPNDLIGCII-----GRQGTKINEIRQMSGAQIKIA-NATE---------------GSSERQ----------------------------------------ITI-----------------------------------------------TGT-PANIS----LAQYLINAR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [909] 'gi|76617800|ref|XP 883985.1| PREDICTED: similar to poly(rC) binding protein 2 isoform 21 [Bos taurus] >gi|73996239|ref|XP 85795' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDTGV-IEGGLNV--------TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS---EG---NCPER-----------------IITLAGPTN---------------------------------------------------------------------------------------------------------AIFKAFAMIIDKL-------EEDISSS---------MTNSTAA-------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAI-----------------TIAGIPQSIIECVKQICVVMLE----S---P---------------------P--------KG--VTIPYRPKPSSSPVIFAGG-------------------QDRYSTGSDSASF-------PHTTPSMCLNPDLEGP--------------------------------------------------------PLEAYTIQGQY-AIPQPD-LTKLHQLAMQQSHF-PMTH-GNT-GFS-------------------AGLDASAQ------------------------------------------------------------------------------------------------------------------------------------------TTSHELTIPNDLIGCII-----GRQGAKINEIRQMSGAQIKIA-NPVE---------------GSTDRQ----------------------------------------VTI-----------------------------------------------TGS-AASIS----LAQYLINVRLSS------------------------------------------------------------------------------------------------------------------ETGGMGSS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [349] 'gi|15082311|gb|AAH12061.1| PCBP3 protein [Homo sapiens]' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MESKV-SEGGLNV--------TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS---EG---NCPER-----------------IVTITGPTD---------------------------------------------------------------------------------------------------------AIFKAFAMIAYKF-------EEDIINS---------MSNSPAT-------SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAV-----------------TISGTPDAIIQCVKQICVVMLE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AYTIQGQY-AIPHPD-LTKLHQLAMQQTPFPPLGQ-TNP-AFPGEKLPLHSSEEAQNLMGQSSGLDASPP------------------------------------------------------------------------------------------------------------------------------------------ASTHELTIPNDLIGCII-----GRQGTKINEIRQMSGAQIKIA-NATE---------------GSSERQ----------------------------------------ITI-----------------------------------------------TGT-PANIS----LAQYLINARLTS------------------------------------------------------------------------------------------------------------------EVTGMGTL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [313] 'gi|79317957|ref|NP 001031044.1| nucleic acid binding [Arabidopsis thaliana]' M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASTLRNIH---------------------------------------------------------------------------DTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRIN---EALP-GCEER-----------------VVTMYSTNE----------------------------------------ELNHFGD---------------------------------------------DGELVCP---ALDALFKVHDMVVADAD------QDDGTDD------------DNDL------GEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVI---------------------------------KD-HLPACALTLSHDELL-----------------LIIGEPLVVREALYQVASLLHD----N-----------PSRFQH--------LLLSS------------------------------------------------------------------------------------------------------------------------------------------SSSSMHQPGAMLMS----------------AALTSSHRN-----------------------YAVRRDIADAREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNT-SETD--DDDCIIFISSKE-------------------------FYEDQ-SPAVNAAIRLQQRCSE------------------------KVGKDANDLAISTRLLVSSSQIGCLI-----GKGGAVISEMRSVTRANIRIL-QKED---------------VPKIAREDEEM-----------------------------------VQI-----------------------------------------------TGS-PDAAM----KALTQVILRLRANSFDM--------------------------------------DHGLVLLP------------------------TSFPYI--------------------------------------PQVTESSSKSKYAK---------------RDDHSKLNSNSKRRNHVS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [446] 'gi|30683629|ref|NP 172869.2| nucleic acid binding [Arabidopsis thaliana] >gi|30102666|gb|AAP21251.1| At1g14170 [Arabidopsis tha' M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASTLRNIH-----------------------------------------------------------DQNVIASE--------DTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRIN---EALP-GCEER-----------------VVTMYSTNE----------------------------------------ELNHFGD---------------------------------------------DGELVCP---ALDALFKVHDMVVADAD------QDDGTDD------------DNDL------GEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVI---------------------------------KD-HLPACALTLSHDELL-----------------LIIGEPLVVREALYQVASLLHD----N-----------PSRFQH--------LLLSS------------------------------------------------------------------------------------------------------------------------------------------SSSSMHQPGAMLMS----------------AALTSSHRN-----------------------YAVRRDIADAREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNT-SETD--DDDCIIFISSKE-------------------------FYEDQ-SPAVNAAIRLQQRCSE------------------------KVGKDANDLAISTRLLVSSSQIGCLI-----GKGGAVISEMRSVTRANIRIL-QKED---------------VPKIAREDEEM-----------------------------------VQI-----------------------------------------------TGS-PDAAM----KALTQVILRLRANSFDM--------------------------------------DHGLVLLP------------------------TSFPYI--------------------------------------PQVTESSSKSKYAK---------------RDDHSKLNSNSKRRNHVS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [454] 'gi|5080792|gb|AAD39302.1| Unknown protein [Arabidopsis thaliana]' M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASTLRNIHGKRSNLQSEFT----------------------------------GNGGSKRRNLHDETDQNVIASE--------DTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRIN---EALP-GCEER-----------------VVTMYSTNE----------------------------------------ELNHFGD---------------------------------------------DGELVCP---ALDALFKVHDMVVADAD------QDDGTDD------------DNDL------GEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVI---------------------------------KD-HLPACALTLSHDELL-----------------LIIGEPLVVREALYQVASLLHD----N-----------PSRFQH--------LLLSS------------------------------------------------------------------------------------------------------------------------------------------SSSSMHQPGAMLMS----------------AALTSSHRN-----------------------YAVRRDIADAREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNT-SETD--DDDCIIFISSKE-------------------------FYEDQ-SPAVNAAIRLQQRCSE------------------------KVGKDANDLAISTRLLVSSSQIGCLI-----GKGGAVISEMRSVTRANIRIL-QKED---------------VPKIAREDEEM-----------------------------------VQI-----------------------------------------------TGS-PDAAM----KALTQVILRLRANSFDM--------------------------------------DHGLVLLP------------------------TSFPYI--------------------------------------PQVTESSSKSKYAK---------------RDDHSKLNSNSKRRNHVS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [479] 'gi|74149644|dbj|BAE36444.1| unnamed protein product [Mus musculus]' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDTGV-IEGGLNV--------TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS---EG---NCPER-----------------IITLAGPTN---------------------------------------------------------------------------------------------------------AIFKAFAMIIDKL-------EEDISSS---------MTNSTAA-------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAI-----------------TIAGIPQSIIECVKQICVVMLETLSQS---P---------------------P--------KG--VTIPYRPKPSSSPVIFAGG-------------------Q----------------------------------------------------------------------------------------------AYTIQGQY-AIPQPD-LTKLHQLAMQQSHF-PMTH-GNT-GFS-------------------AGLDASAQ------------------------------------------------------------------------------------------------------------------------------------------TTSHELTIPNDLIGCII-----GRQGAKINEIRQMSGAQIKIA-NPVE---------------GSTDRQ----------------------------------------VTI-----------------------------------------------TGS-AASIS----LAQYLINVRLSS------------------------------------------------------------------------------------------------------------------ETGGMGSS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [322] 'gi|460773|emb|CAA55015.1| hnRNP-E2 [Homo sapiens] >gi|50926841|gb|AAH78906.1| Poly(rC) binding protein 2 (predicted) [Rattus no' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDTGV-IEGGLNV--------TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS---EG---NCPER-----------------IITLAGPTN---------------------------------------------------------------------------------------------------------AIFKAFAMIIDKL-------EEDISSS---------MTNSTAA-------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAI-----------------TIAGIPQSIIECVKQICVVMLETLSQS---P---------------------P--------KG--VTIPYRPKPSSSPVIFAGG-------------------QDRYSTGSDSASF-------PHTTPSMCLNPDLEGP--------------------------------------------------------PLEAYTIQGQY-AIPQPD-LTKLHQLAMQQSHF-PMTH-GNT-GFSG------IESSSPEVKGYW-GLDASAQ------------------------------------------------------------------------------------------------------------------------------------------TTSHELTIPNDLIGCII-----GRQGAKINEIRQMSGAQIKIA-NPVE---------------GSTDRQ----------------------------------------VTI-----------------------------------------------TGS-AASIS----LAQYLINVRLSS------------------------------------------------------------------------------------------------------------------ETGGMGSS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [365] 'gi|14141168|ref|NP 005007.2| poly(rC)-binding protein 2 isoform a [Homo sapiens] >gi|47940610|gb|AAH71942.1| Poly(rC)-binding p' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDTGV-IEGGLNV--------TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS---EG---NCPER-----------------IITLAGPTN---------------------------------------------------------------------------------------------------------AIFKAFAMIIDKL-------EEDISSS---------MTNSTAA-------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAI-----------------TIAGIPQSIIECVKQICVVMLETLSQS---P---------------------P--------KG--VTIPYRPKPSSSPVIFAGG-------------------QDRYSTGSDSASF-------PHTTPSMCLNPDLEGP--------------------------------------------------------PLEAYTIQGQY-AIPQPD-LTKLHQLAMQQSHF-PMTH-GNT-GFSG------IESSSPEVKGYWAGLDASAQ------------------------------------------------------------------------------------------------------------------------------------------TTSHELTIPNDLIGCII-----GRQGAKINEIRQMSGAQIKIA-NPVE---------------GSTDRQ----------------------------------------VTI-----------------------------------------------TGS-AASIS----LAQYLINVRLSS------------------------------------------------------------------------------------------------------------------ETGGMGSS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [366] 'gi|6997239|ref|NP 035172.1| poly(rC) binding protein 2 [Mus musculus] >gi|1360003|emb|CAA66619.1| nuclear poly(C)-binding prote' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDTGV-IEGGLNV--------TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS---EG---NCPER-----------------IITLAGPTN---------------------------------------------------------------------------------------------------------AIFKAFAMIIDKL-------EEDISSS---------MTNSTAA-------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAI-----------------TIAGIPQSIIECVKQICVVMLE----S---P---------------------P--------KG--VTIPYRPKPSSSPVIFAGG-------------------QDRYSTGSDSASF-------PHTTPSMSLNPDLEGP--------------------------------------------------------PLEAYTIQGQY-AIPQPD-LTKLHQLAMQQSHF-PMTH-GNT-GFS-------------------AGLDASAQ------------------------------------------------------------------------------------------------------------------------------------------TTSHELTIPNDLIGCII-----RRQGAKINEIRQMSGAQIKIA-NPVE---------------GSTDRQ----------------------------------------VTI-----------------------------------------------TGS-AASIS----LAQYLINVRLSS------------------------------------------------------------------------------------------------------------------ETGGMGSS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [349] 'gi|55638165|ref|XP 522406.1| PREDICTED: similar to nuclear poly(C)-binding protein, splicevariant E [Pan troglodytes]' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDTGV-IEGGLNV--------TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS---EG---NCPER-----------------IITLAGPTN---------------------------------------------------------------------------------------------------------AIFKAFAMIIDKL-------EEDISSS---------MTNSTAA-------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAI-----------------TIAGIPQSIIECVKQICVVMLE----------------------------------------------------------------------------------DRYSTGSDSASF-------PHTTPSMCLNPDLEGP--------------------------------------------------------PLEAYTIQGQY-AIPQPD-LTKLHQLAMQQSHF-PMTH-GNT-GFS-------------------AGLDASAQ------------------------------------------------------------------------------------------------------------------------------------------TTSHELTIPNDLIGCII-----GRQGAKINEIRQMSGAQIKIA-NPVE---------------GSTDRQ----------------------------------------VTI-----------------------------------------------TGS-AASIS----LAQYLINVR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [313] 'gi|15236863|ref|NP 193572.1| nucleic acid binding [Arabidopsis thaliana] >gi|22136632|gb|AAM91635.1| unknown protein [Arabidops' M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VERKKRKQIQRNNSESNRNQKRRISHDK-----INRDE--------LVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVF---DQLH-GCSQR-----------------VITIYCSVKEKQEEIGFTKS---------------------------------------------------------------------------------ENE---PLCCAQDALLKVYDAIVASDEEN--------------------NTKTNVD-------RDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVS--------------------------------KDVSDPSHVCAMEYDNVV-----------------VISGEPESVKQALFAVSAIMYK----I-----------NPRENI--------PLDSTSQDVPAASVIVPSDLSNSV----------------------------------------------------------------------------------------------------------------YPQTGFYSNQDHILQQGAGVP-----------SYFNALSVSDFQGYAETAANPVP---VFA---SSLPVTHGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVND-SRTKCGDDECVIIVTATE-------------------------SPDDMKSMAVEAVLLLQEYIND------------------------EDAE-----NVKMQLLVSSKVIGCVI-----GKSGSVINEIRKRTNANICIS-KGKK-----------------------DDL-----------------------------------VEV-----------------------------------------------SGE-VSSVR----DALIQIVLRLREDVLGD--------------------------------------KDSVATRKPPARTDNCSFL-SGSSNAGYTLP-SFMSSM-----------------------------------------------------------------------------ASTSGFHGYGSFPAGDNVLGSTGPYS--------------------------------------------------------------------------------YGRLPSSSALEILIPAHAMSKVMGKGGGNLENIRRISGAMIEISASKTSHGDHIALLSGTLEQMRCAENLVQAFVMST---------------- [606] 'gi|30684386|ref|NP 849406.1| nucleic acid binding [Arabidopsis thaliana] >gi|24762211|gb|AAN64172.1| putative KH domain protein' M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VERKKRKQIQRNNSESNRNQKRRISHDK-----INRDE--------LVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVF---DQLH-GCSQR-----------------VITIYCSVKEKQEEIGFTKS---------------------------------------------------------------------------------ENE---PLCCAQDALLKVYDAIVASDEEN--------------------NTKTNVD-------RDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVS--------------------------------KDVSDPSHVCAMEYDNVV-----------------VISGEPESVKQALFAVSAIMYK----I-----------NPRENI--------PLDSTSQDVPAASVIVPSDLSNSV----------------------------------------------------------------------------------------------------------------YPQTGFYSNQDHILQQGAGVP-----------SYFNALSVSDFQGYAETAANPVP---VFA---SSLPVTHGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVND-SRTKCGDDECVIIVTATE-------------------------SPDDMKSMAVEAVLLLQEYIND------------------------EDAE-----NVKMQLLVSSKVIGCVI-----GKSGSVINEIRKRTNANICIS-KGKK-----------------------DDL-----------------------------------VEV-----------------------------------------------SGE-VSSVR----DALIQIVLRLREDVLGD--------------------------------------KDSVATRKPPARTDNCSFL-SGSSNAGYTLP-SFMSSM-----------------------------------------------------------------------------ASTSGFHGYGSFPAGDNVLGSTGPYS--------------------------------------------------------------------------------YGRF------------------------------------------------------------------------------------------ [532] 'gi|7268630|emb|CAB78839.1| putative protein [Arabidopsis thaliana] >gi|2832642|emb|CAA16717.1| putative protein [Arabidopsis th' M----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALASSKAFSSIFNTLSPINQSKFVLACSGSNHVDVIDRRRRIMIFGSSLALTSSLLGSNQQRLPMESAIALEQFKEKEEELEEEEERNVNLFQKTSPSVVYIEAIELPKTSSGDILTDEENGKIEGTGSGFVWDKLGHIVTNYHVIAKLATDQFGLQRCKVSLVDAKGTRFSKEGKIVGLDPDNDLAVLKIETEGRELNPVVLGTSNDLRVGQSCFAIGNPYGYENTLTIGVVSGLGREIPSPNGKSISEAIQTDADINSGNSGGPLLDSYGHTIGVNTATFTRKGSGMSSGLIETDSEVLNSVYLTMVERKKRKQIQRNNSESNRNQKRRISHDK-----INRDE--------LVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVF---DQLH-GCSQR-----------------VITIYCSVKEKQEEIGFTKS---------------------------------------------------------------------------------ENE---PLCCAQDALLKVYDAIVASDEEN--------------------NTKTNVD-------RDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVS--------------------------------KDVSDPSHVCAMEYDNVV-----------------VISGEPESVKQALFAVSAIMYK----I-----------NPRENI--------PLDSTSQDVPAASVIVPSDLSNSV----------------------------------------------------------------------------------------------------------------YPQTGFYSNQDHILQQGAGVP-----------SYFNALSVSDFQGYAETAANPVP---VFA---SSLPVTHGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVND-SRTKCGDDECVIIVTATE-----------ILFCCLSTPFVFMQSPDDMKSMAVEAVLLLQEYIND------------------------EDAE-----NVKMQLLVSSKVIGCVI-----GKSGSVINEIRKRTNANICIS-KGKK-----------------------DDL-----------------------------------VEV-----------------------------------------------SGE-VSSVR----DALIQIVLRLREDVLGD--------------------------------------KDSVATRKPPARTDNCSFL-SGSSNAGYTLP-SFMSSM-----------------------------------------------------------------------------ASTSGFHGYGSFPVKSCILDFH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [846] 'gi|76617796|ref|XP 883927.1| PREDICTED: similar to Poly(rC)-binding protein 2 (Alpha-CP2) (Putative heterogeneous nuclear ribon' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDTGV-IEGGLNV--------TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS---EG---NCPER-----------------IITLAGPTN---------------------------------------------------------------------------------------------------------AIFKAFAMIIDKL-------EEDISSS---------MTNSTAA-------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAI-----------------TIAGIPQSIIECVKQICVVMLE----S---P---------------------P--------KG--VTIPYRPKPSSSPVIFAGG-------------------QDRYSTGSDSASF-------PHTTPSMCLNPDLEGP--------------------------------------------------------PLE----------------LTKLHQLAMQQSHF-PMTH-GNT-GFSG------IESSSPEVKGYWAGLDASAQ------------------------------------------------------------------------------------------------------------------------------------------TTSHELTIPNDLIGCII-----GRQGAKINEIRQMSGAQIKIA-NPVE---------------GSTDRQ----------------------------------------VTI-----------------------------------------------TGS-AASIS----LAQYLINVRLSS------------------------------------------------------------------------------------------------------------------ETGGMGSS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [348] 'gi|76617802|ref|XP 884012.1| PREDICTED: similar to Poly(rC)-binding protein 2 (Alpha-CP2) (Putative heterogeneous nuclear ribon' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDTGV-IEGGLNV--------TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS---EG---NCPER-----------------IITLAGPTN---------------------------------------------------------------------------------------------------------AIFKAFAMIIDKL-------EEDISSS---------MTNSTAA-------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAI-----------------TIAGIPQSIIECVKQICVVMLE----S---P---------------------P--------KG--VTIPYRPKPSSSPVIFAGG-------------------QDRYSTGSDSASF-------PHTTPSMCLNPDLEGP--------------------------------------------------------PLEAYTIQGQY-AIPQPD-LTKLHQLAMQQSHF-PMTH-GNT-GFSG------IESSSPEVKGYWAGLDASAQ------------------------------------------------------------------------------------------------------------------------------------------TTSHELTIPNDLIGCII-----GRQGAKINEIRQMSGAQIKIA-NPVE---------------GSTDRQ----------------------------------------VTI-----------------------------------------------TGS-AASIS----LAQYLINVRLSS------------------------------------------------------------------------------------------------------------------ETGGMGSS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [362] 'gi|28317389|tpe|CAD29864.1| TPA: hnRNP-E2 b [Xenopus laevis]' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDTGV-IEGGLNV--------TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS---EG---NCPER-----------------IITLAGPTN---------------------------------------------------------------------------------------------------------AIFKAFSMIIDKL-------EEDISSS---------MTNSTAS-------SKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAI-----------------TIAGIPQSIIECVKQICVVMLE----S---P---------------------P--------KG--VTIPYRPKPSSSPVIFAGG-------------------Q----------------------------------------------------------------------------------------------AYTIQGQY-AIPQPD-LTKLHQLAMQQSHF-PMSHSGNT-GFS-------------------GGIDASAQ------------------------------------------------------------------------------------------------------------------------------------------ATSHELTIPNDLIGCII-----GRQGAKINEIRQMSGAQIKIA-NPVE---------------GSNDRQ----------------------------------------VTI-----------------------------------------------TGS-TASIS----LAQYLINVRLSS------------------------------------------------------------------------------------------------------------------EAGGMGSS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [319] 'gi|73996213|ref|XP 857432.1| PREDICTED: similar to Poly(rC)-binding protein 2 (Alpha-CP2) (Putative heterogeneous nuclear ribon' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDTGV-IEGGLNV--------TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS---EG---NCPER-----------------IITLAGPTN---------------------------------------------------------------------------------------------------------AIFKAFAMIIDKL-------EEDISSS---------MTNSTAA-------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAI-----------------TIAGIPQSIIECVKQICVVMLE----S---P---------------------P--------KG--VTIPYRPKPSSSPVIFAGG-------------------QDRYSTGSDSASF-------PHTTPSMCLNPDLEGP--------------------------------------------------------PLEAYTIQGQY-AIPQPD-LTKLHQLAMQQSHF-PMTH-GNT-GFSG------IESSSPEVKGYWAGLDASAQ------------------------------------------------------------------------------------------------------------------------------------------TTSHELTIPNDLIGCII-----GRQGAKINEIRQMSGAQIKIA-NPVE---------------GSTDRQ----------------------------------------VTI-----------------------------------------------TGS-AASIS----LAQYLINVSLENAKPSSQA-----------------------------------ASVTIPDHLSINLSQPSTPSSSSSSSTTTPSLATAGTSDAPSSLPNPLPTAPCVSSLLGMKPIPLLALNVVSAAKGTGASATTTTTSAVPCVTNKLKGEKQRFSPY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [467] 'gi|42573788|ref|NP 974990.1| HEN4 (HUA ENHANCER 4); nucleic acid binding [Arabidopsis thaliana]' M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERNSVKFHAEKRSGAFDPGSGFGSSKRVKTHHTQLLSALVVPVG--------HAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVE---EPPS-GSPDR-----------------VITIIAQAD--------------------------SKSRVKLGANNNGNAEGEKKE---------------------------------------------EEVEVSK---AQGALIKVFELLAAEA-------------------------------------DSDTVVCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISI----------------------------------RIENLPICA--DTDDEMV-----------------EVEGNAIAVKKALVSISRCLQN----CQSIDKVRMVGNRPLEKEFQASLHRPIETIIQESLPRSVEVNPYDYRLRNDEIFPRGTVARANDVIPHDTLHLRRIEAVPQGALRMHIEADRQDVLRRHVEADRQDALRRRIDVVPQETLYMPSDVLRGDCFRQHRERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQETLRGQSAD-YLAHRYSTLDTHPHSFTTSASMANTATMK--------------PPPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGN-TLDD--CEERLIAVTASE-------------------------NPECQSSPAQKAIMLIFSRLFELATN--------------------KILDNGPRSSITARLVVPTSQIGCVL-----GKGGVIVSEMRKTTGAAIQIL-KVEQ---------------NPKCISENDQV-----------------------------------VQI-----------------------------------------------TGE-FPNVR----EAIFHITSRLRDSVFSNSM-----------------------------------KNSLAKSSSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSLHRRSEDSFLSGSHSSVNYSRSVGTDPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDNSHHLTEAPSRLWASPPPAAPRGLSDASGGLSSARAGHVLG-----------------------------------------------------------------------------SGHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQVSHFLFT--------------------------NLLLVFPIASSKRG------------ [824] 'gi|22328051|ref|NP 201244.2| HEN4 (HUA ENHANCER 4); nucleic acid binding [Arabidopsis thaliana]' M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERNSVKFHAEKRSGAFDPGSGFGSSKRVKTHHTQLLSALVVPVG--------HAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVE---EPPS-GSPDR-----------------VITIIAQAD--------------------------SKSRVKLGANNNGNAEGEKKE---------------------------------------------EEVEVSK---AQGALIKVFELLAAEA-------------------------------------DSDTVVCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISI----------------------------------RIENLPICA--DTDDEMV-----------------EVEGNAIAVKKALVSISRCLQN----CQSIDKVRMVGNRPLEKEFQASLHRPIETIIQESLPRSVEVNPYDYRLRNDEIFPRGTVARANDVIPHDTLHLRRIEAVPQGALRMHIEADRQDVLRRHVEADRQDALRRRIDVVPQETLYMPSDVLRGDCFRQHRERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQETLRGQSAD-YLAHRYSTLDTHPHSFTTSASMANTATMK--------------PPPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGN-TLDD--CEERLIAVTASE-------------------------NPECQSSPAQKAIMLIFSRLFELATN--------------------KILDNGPRSSITARLVVPTSQIGCVL-----GKGGVIVSEMRKTTGAAIQIL-KVEQ---------------NPKCISENDQV-----------------------------------VQI-----------------------------------------------TGE-FPNVR----EAIFHITSRLRDSVFSNSM-----------------------------------KNSLAKSSSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSLHRRSEDSFLSGSHSSVNYSRSVGTDPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDNSHHLTEAPSRLWASPPPAAPRGLSDASGGLSSARAGHVLG-----------------------------------------------------------------------------SGHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARVIIHEPPLGTSDRIIVISGTPDQTQAAQNLLHAFILTGETSLSKKYNLN----- [857] 'gi|66911068|gb|AAH97410.1| Pcbp2 protein [Rattus norvegicus] >gi|78395095|gb|AAI07689.1| PCBP2 protein [Homo sapiens]' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDTGV-IEGGLNV--------TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS---EG---NCPER-----------------IITLAGPTN---------------------------------------------------------------------------------------------------------AIFKAFAMIIDKL-------EEDISSS---------MTNSTAA-------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAI-----------------TIAGIPQSIIECVKQICVVMLETLSQS---P---------------------P--------KG--VTIPYRPKPSSSPVIFAGG-------------------Q----------------------------------------------------------------------------------------------AYTIQGQY-AIPQPD-LTKLHQLAMQQSHF-PMTH-GNT-GFSG------IESSSPEVKGYWAGLDASAQ------------------------------------------------------------------------------------------------------------------------------------------TTSHELTIPNDLIGCII-----GRQGAKINEIRQMSGAQIKIA-NPVE---------------GSTDRQ----------------------------------------VTI-----------------------------------------------TGS-AASIS----LAQYLINVRLSS------------------------------------------------------------------------------------------------------------------ETGGMGSS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [335] 'gi|460771|emb|CAA55016.1| hnRNP-E1 [Homo sapiens] >gi|5453854|ref|NP 006187.1| poly(rC) binding protein 1 [Homo sapiens]' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDAGV-TESGLNV--------TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINIS---EG---NCPER-----------------IITLTGPTN---------------------------------------------------------------------------------------------------------AIFKAFAMIIDKL-------EEDINSS---------MTNSTAA-------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAI-----------------TIAGVPQSVTECVKQICLVMLE----TLSQS---------------------P--------QGRVMTIPYQPMPASSPVICAGG-------------------QDR---CSDAVGY-------PHAT------HDLEGP--------------------------------------------------------PLDAYSIQGQH-TISPLD-LAKLNQVARQQSHF-AMMH-GGT-GFAG------IDSSSPEVKGYWASLDASTQ------------------------------------------------------------------------------------------------------------------------------------------TT-HELTIPNNLIGCII-----GRQGANINEIRQMSGAQIKIA-NPVE---------------GSSGRQ----------------------------------------VTI-----------------------------------------------TGS-AASIS----LAQYLINARLSS------------------------------------------------------------------------------------------------------------------EK-GMGCS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [356] 'gi|15237393|ref|NP 199431.1| nucleic acid binding [Arabidopsis thaliana] >gi|21280941|gb|AAM44907.1| unknown protein [Arabidops' M----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VERGKRTHNRFRDNNNDNNRNQRRRLSYESEEKKIDNKDD-------LVVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVV---DPFP-GCSER-----------------VITIFCSVSEKKDIVDIEYS---------------------------------------------------------------------------------ELDYSVPLCSAQAALLKVHDAIVASLATA--------------------AENTKID-------RDDFRECRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVS--------------------------------KDVSDPSHTCAMDFDNIV-----------------MISGETESVKKALFAVSAIMYK----V-----------SPREQI--------PLDTTVQEVP-ASIIIPSDL--SI----------------------------------------------------------------------------------------------------------------YPQAGLYPSQDSIFQHGANVS-----------SFIGTLP----QGYGENAANPVP---VFSA--SALPVVHGFGGSSRSEKLAIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVND-SRTN-HDDDCVITVTATE-------------------------SPDDLKSMAVEAVLLLQEKIND------------------------EDED-----KVKMQLLVSSKVIGCII-----GKSGSIISEIRKRTKADIHIS-KGNN---------------TPKCADPNDEL-----------------------------------VEI-----------------------------------------------SGE-VSNVR----DALIQIVLRLRDDVLRD--------------------------------------RETGSRNQPPARSENNNFFSSSSSNTGLALPQSFMSSV--------------------------------------PQVASVDFNRR------------------PETGSSMSMLPSSGGIYGYGSFPVGNTSYGSNSSYS-----------------------------------------------------------------------------SNLYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDNIRRISGAMIEISDSKNSHGGRVALISGTSEQKRTAENLFQAFIMST---------------- [644] 'gi|9759415|dbj|BAB09870.1| unnamed protein product [Arabidopsis thaliana]' M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERNSVKFHAEKRSGAFDPGSGFGSSKRVKTHHTQLLSALVVPVG--------HAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVE---EPPS-GSPDR-----------------VITIIAQAD--------------------------SKSRVKLGANNNGNAEGEKKE---------------------------------------------EEVEVSK---AQGALIKVFELLAAEA-------------------------------------DSDTVVCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISI----------------------------------RIENLPICA--DTDDEMV-----------------EVEGNAIAVKKALVSISRCLQN----CQSIDKVRMVGNRPLEKEFQASLHRPIETIIQESLPRSVEVNPYDYRLRNDEIFPRGTVARANDVIPHDTLHLRRIEAVPQGALRMHIEADRQDVLRRHVEADRQDALRRRIDVVPQETLYMPSDVLRGDCFRQHRERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQETLRGQSAD-YLAHRYSTLDTHPHSFTTSASMANTATMK--------------PPPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGN-TLDD--CEERLIAVTASE-------------------------NPECQSSPAQKAIMLIFSRLFELATN--------------------KILDNGPRSSITARLVVPTSQIGCVL-----GKGGVIVSEMRKTTGAAIQIL-KVEQ---------------NPKCISENDQV-----------------------------------VQI-----------------------------------------------TGE-FPNVR----EAIFHITSRLRDSVFSNSM-----------------------------------KNSLAKSSSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSLHRRSEDSFLSGSHSSVNYSRSVGTDPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDNSHHLTEAPSRLWASPPPAAPRGLSDASGGLSSARAGHVLGSLHARLVFS--------------------------------------------------------------------SGHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQVSHFLFT--------------------------NLLLVFPIASSKRG------------ [833] 'gi|62087230|dbj|BAD92062.1| poly(rC)-binding protein 2 isoform b variant [Homo sapiens]' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLKVQLPRTLLDMDTGV-IEGGLNV--------TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS---EG---NCPER-----------------IITLAGPTN---------------------------------------------------------------------------------------------------------AIFKAFAMIIDKL-------EEDISSS---------MTNSTAA-------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAI-----------------TIAGIPQSIIECVKQICVVMLE----S---P---------------------P--------KG--VTIPYRPKPSSSPVIFAGG-------------------QDRYSTGSDSASF-------PHTTPSMCLNPDLEGP--------------------------------------------------------PLEAYTIQGQY-AIPQPD-LTKLHQLAMQQSHF-PMTH-GNT-GFSG------IESSSPEVKGYW-GLDASAQ------------------------------------------------------------------------------------------------------------------------------------------TTSHELTIPNDLIGCII-----GRQGAKINEIRQMSGAQIKIA-NPVE---------------GSTDRQ----------------------------------------VTI-----------------------------------------------TGS-AASIS----LAQYLINVRLSS------------------------------------------------------------------------------------------------------------------ETGGMGSS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [373] 'gi|21553916|gb|AAM62999.1| unknown [Arabidopsis thaliana]' M----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VERGKRTHNRFRDNNNDNNRNQRRRLSYESEEKKIDNKDD-------LVVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVV---DPFP-GCSER-----------------VITIFCSVSEKKDIVDIEYS---------------------------------------------------------------------------------ELDYSVPLCSAQAALLKVHDAIVASLATA--------------------AENTKID-------RDDFRECRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVS--------------------------------KDASDPSHTCAMDFDNIV-----------------MISGETESVKKALFAVSAIMYK----V-----------SPREQI--------PLDTTVQEVP-ASIIIPSDL--SI----------------------------------------------------------------------------------------------------------------YPQAGLYPSQDSIFQHGANVS-----------SFIGTLP----QGYGENAANPLP---VFSA--SALPVVHGFGGSSRSEKLAIKVICASSKIGRVIGKGGLTIKGIRQASGSHIEVND-SRTN-HDDDCVITVTATE-------------------------SPDDLKSMAVEAVLLLQEKIND------------------------EDED-----KVKMQLLVSSKVIGCII-----GKSGSIISEIRKRTKADIHIS-KGNN---------------TPKSADPNDEL-----------------------------------VEI-----------------------------------------------SGE-VSNVR----DALIQIVLRLRDDVLRD--------------------------------------RETGSRNQPPARSENNNFFSSSSSNTGLALPQSFMSSV--------------------------------------PQVASVDFDRR------------------PETGSSMSMLPSSGGIYGYGSFPVGNTSYGSNSSYS-----------------------------------------------------------------------------SNLYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDNIRRISGAMIEISDSKNSHGGRVALISGTSEQKRTAENLFQAFIMST---------------- [644] 'gi|3702642|emb|CAA21234.1| SPCC757.09c [Schizosaccharomyces pombe] >gi|19075184|ref|NP 587684.1| hypothetical protein SPCC757.0' MAY-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NHFSIPKNIEEKENSFFDVTFQDEPDETTSTATGIAKVSIPTPKPSTPLSTLTNGSTIQQSMTNQPEPTSQVPPISAKPPMDDATYATQ--------QLTLRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVT---KAVP-NVHDR-----------------VLTISGPLE---------------------------------------------------------------------------------------------------------NVVRAYRFIIDIF-------AKNSTNP---------DG-TPSD-------ANTPRKLRLLIAHSLMGSIIGRNGLRIKLIQDKCSCRMIASK--------------------------------------DMLP-QSTERTV-----------------EIHGTVDNLHAAIWEIGKCLID----DWERG---------------------------------AGTVFYNPV-----------------------------------------------------------------------------------------------------------------------------SRLTQPLPSLASTAS-PQQVSPPAAPSTTSGEAIPENFV------------------------------------------------------------------------------------------------------------------SYGAQVFPATQMPF--------------------------------LQQP-----KVTQNISIPADMVGCII-----GRGGSKISEIRRTSGSKISIAKEPHD---------------ETGERM----------------------------------------FTI-----------------------------------------------TGT-HEENE----KALFLLYQQLEMEKDRRSH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [398] 'gi|57093423|ref|XP 538537.1| PREDICTED: similar to Poly(rC)-binding protein 1 (Alpha-CP1) (hnRNP-E1) isoform 1 [Canis familiari' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDAGV-TESGLNV--------TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINIS---EG---NCPER-----------------IITLTGPTN---------------------------------------------------------------------------------------------------------AIFKAFAMIIDKL-------EEDINSS---------MTNSTAA-------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAI-----------------TIAGVPQSVTECVKQICLVMLE----TLSQS---------------------P--------QGRVMTIPYQPMPASSPVICAGG-------------------QDR---CGDAAGY-------PHAT------HDLEGP--------------------------------------------------------PLDAYSIQGQH-TISPLD-LAKLNQVARQQSHF-AMMH-GGT-GFAG------IDSSSPEVKGYWASLDASTQ------------------------------------------------------------------------------------------------------------------------------------------TT-HELTIPNNLIGCII-----GRQGANINEIRQMSGAQIKIA-NPVE---------------GSSGRQ----------------------------------------VTI-----------------------------------------------TGS-AASIS----LAQYLINARLSS------------------------------------------------------------------------------------------------------------------EK-GMGCS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [356] 'gi|73985371|ref|XP 860240.1| PREDICTED: similar to Poly(rC)-binding protein 4 (Alpha-CP4) isoform 5 [Canis familiaris]' MSG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDAGLEEEPELSI--------TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITIS---EG---SCPER-----------------ITTITGSTA---------------------------------------------------------------------------------------------------------AVFHAVSMIAFKL-------DEDLCAA---------PANGGNV-------SRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAG--------------------------------------DLLP-NSTERAV-----------------TVSGVPDAIILCVRQICAVILE----S---P---------------------P--------KG--ATIPYHPSLSLGTVLLSAN-------------------Q----------------------------------------------------------------------------------------------GFSVQGQYGAVTPAE-VTKLQQLSGHANHV------QSPFSSF-------------------PGLDPGAQ------------------------------------------------------------------------------------------------------------------------------------------TSSQEFLVPNDLIGCVI-----GRQGSKISEIRQMSGAHIKIG-NQAE---------------GAGERH----------------------------------------VTI-----------------------------------------------TGS-PVSIA----LAQYLITACLETAKSTSGG-----------------------------------TPGSAPTDLPAPFSPPLTALPTAPPGLLG------------------TPYAISLSNFIGLKPVPFLALPPASPGPPPGLAAYTAKMAAANGSKKAERQK----------------------------FSP-Y---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [404] 'gi|73996235|ref|XP 857871.1| PREDICTED: similar to Poly(rC)-binding protein 2 (Alpha-CP2) (Putative heterogeneous nuclear ribon' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDTGV-IEGGLNV--------TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS---EG---NCPER-----------------IITLAGPTN---------------------------------------------------------------------------------------------------------AIFKAFAMIIDKL-------EEDISSS---------MTNSTAA-------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAI-----------------TIAGIPQSIIECVKQICVVMLE----V---S---------------------PQAHAENGGRG--VTIPYRPKPSSSPVIFAGG-------------------QDRYSTGSDSASF-------PHTTPSMCLNPDLEGP--------------------------------------------------------PLEAYTIQGQY-AIPQPD-LTKLHQLAMQQSHF-PMTH-GNT-GFSG------IESSSPEVKGYWAGLDASAQ------------------------------------------------------------------------------------------------------------------------------------------TTSHELTIPNDLIGCII-----GRQGAKINEIRQMSGAQIKIA-NPVE---------------GSTDRQ----------------------------------------VTI-----------------------------------------------TGS-AASIS----LAQYLINVRLSS------------------------------------------------------------------------------------------------------------------ETGGMGSS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [370] 'gi|38566984|emb|CAE76284.1| related to hnRNP protein E2 [Neurospora crassa] >gi|85111179|ref|XP 963814.1| hypothetical protein' MSA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SPQPTQSAKRPLDESSSPS-RNDQPEA------------KRLALDKVVKD-AQEEVEAPVPEDSHNADETAGSATPTPAP---------------------------------------------------------------ESNGT--KVKGDKSE-GQDAQGDTVVPDAP--------QSKATKDHGARSRAQPPVSA---QPHDETA--------WIHVRSVISSPEAATIIGKGGENVSKIREMSNAKCTVS---DYQK-GAVER-----------------ILTVSGVVD---------------------------------------------------------------------------------------------------------AVAKAFGLIIRTL-------NNEPLAE---------PSNTHSK-------TYP---LRLLIPHVLIGSIIGKGGARIKEIQEASGARLNASD--------------------------------------SCLP-LSTERSL-----------------VVMGVADAVHIATYYVGSTLLE----QLNERFGGPAASAYATRSGGPAASIP--------GG--LQVVPYVPQ------------------PAGGNFGNRDYYQRNRGPDPRSHH-----------------------------------------------------------------------GMPPSQYP-APYGAPH-PAQPNPA-----VPMHYGAHAAGGYGAAAPHVAP--HVGH---AGPA---PHA-AGPHGAPVAGA------------------------------------------------------------------------------------------------------------------------------------------ALTQQIYIPNDMVGAII-----GKGGQKINEIRQISGSVIKIN-EPQD---N-----------SNE-RL----------------------------------------VTI-----------------------------------------------TGT-EECNR----MALYLLYQRLGELQNNGRD-----------------------------------SQQPNH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [489] 'gi|13435897|gb|AAH04793.1| Poly(rC) binding protein 1 [Mus musculus] >gi|2644966|emb|CAA05814.1| hnRNP-E1 protein [Oryctolagus' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDAGV-TESGLNV--------TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINIS---EG---NCPER-----------------IITLTGPTN---------------------------------------------------------------------------------------------------------AIFKAFAMIIDKL-------EEDINSS---------MTNSTAA-------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAI-----------------TIAGVPQSVTECVKQICLVMLE----TLSQS---------------------P--------QGRVMTIPYQPMPASSPVICAGG-------------------QDR---CSDAAGY-------PHAT------HDLEGP--------------------------------------------------------PLDAYSIQGQH-TISPLD-LAKLNQVARQQSHF-AMMH-GGT-GFAG------IDSSSPEVKGYWASLDASTQ------------------------------------------------------------------------------------------------------------------------------------------TT-HELTIPNNLIGCII-----GRQGANINEIRQMSGAQIKIA-NPVE---------------GSSGRQ----------------------------------------VTI-----------------------------------------------TGS-AASIS----LAQYLINARLSS------------------------------------------------------------------------------------------------------------------EK-GMGCS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [356] 'gi|73985375|ref|XP 860317.1| PREDICTED: similar to Poly(rC)-binding protein 4 (Alpha-CP4) isoform 7 [Canis familiaris]' MSG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDAGLEEEPELSI--------TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITIS---EG---SCPER-----------------ITTITGSTA---------------------------------------------------------------------------------------------------------AVFHAVSMIAFKL-------DEDLCAA---------PANGGNV-------SRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAG--------------------------------------DLLP-NSTERAV-----------------TVSGVPDAIILCVRQICAVILE----S---P---------------------P--------KG--ATIPYHPSLSLGTVLLSAN-------------------Q----------------------------------------------------------------------------------------------GFSVQGQYGAVTPAE-VTKLQQLSGHAVPF------ASP-SMV-------------------PGLDPGAQ------------------------------------------------------------------------------------------------------------------------------------------TSSQEFLVPNDLIGCVI-----GRQGSKISEIRQMSGAHIKIG-NQAE---------------GAGERH----------------------------------------VTI-----------------------------------------------TGS-PVSIA----LAQYLITACLETAKSTSGG-----------------------------------TPGSAPTDLPAPFSPPLTALPTAPPGLLG------------------TPYAISLSNFIGLKPVPFLALPPASPGPPPGLAAYTAKMAAANGSKKAEGQPKEGTLLGSWGSGMEAGAEFSAADTLYSFFNPCF---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [432] 'gi|37681899|gb|AAQ97827.1| poly(rC) binding protein 2 [Danio rerio] >gi|41055221|ref|NP 957486.1| poly(rC) binding protein 2 [D' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDSGV-IEGGLNV--------TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS---EG---NCPER-----------------IITLAGPTT---------------------------------------------------------------------------------------------------------AIFKAFSMIIEKL-------EEDISSS---------MSNSTAT-------SKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAI-----------------TIAGTPLSIIECVKQICVVMLE----S---P---------------------P--------KG--VTIPYRPKPSGSPVIFAGG-------------------Q----------------------------------------------------------------------------------------------AYAVQGQH-AIPQPD-LTKLHQLAMQQSPF-PLAP-SSQ-GFT-------------------AGMDASAQ------------------------------------------------------------------------------------------------------------------------------------------TGSHELTIPNDLIGCII-----GRQGAKINEIRQMSGAQIKIA-NPVE---------------GSSDRQ----------------------------------------VTI-----------------------------------------------TGS-PASIS----LAEYLINARLSS------------------------------------------------------------------------------------------------------------------EATGMAAN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [318] 'gi|73985379|ref|XP 860380.1| PREDICTED: similar to Poly(rC)-binding protein 4 (Alpha-CP4) isoform 8 [Canis familiaris] >gi|7398' MSG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDAGLEEEPELSI--------TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITIS---EG---SCPER-----------------ITTITGSTA---------------------------------------------------------------------------------------------------------AVFHAVSMIAFKL-------DEDLCAA---------PANGGNV-------SRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAG--------------------------------------DLLP-NSTERAV-----------------TVSGVPDAIILCVRQICAVILE----S---P---------------------P--------KG--ATIPYHPSLSLGTVLLSAN-------------------Q----------------------------------------------------------------------------------------------GFSVQGQYGAVTPAE-VTKLQQLSGHAVPF------ASP-SMV-------------------PGLDPGAQ------------------------------------------------------------------------------------------------------------------------------------------TSSQEFLVPNDLIGCVI-----GRQGSKISEIRQMSGAHIKIG-NQAE---------------GAGERH----------------------------------------VTI-----------------------------------------------TGS-PVSIA----LAQYLITACLETAKSTSGG-----------------------------------TPGSAPTDLPAPFSPPLTALPTAPPGLLG------------------TPYAISLSNFIGLKPVPFLALPPASPGPPPGLAAYTAKMAAANGSKKAERQK----------------------------FSP-Y---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [403] 'gi|2673961|gb|AAB88661.1| astrocytic NOVA-like RNA-binding protein [Homo sapiens]' LSQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AP---------------------PMEPEAPDSRKRPLETPPEVVCTK-------RSNT--------------------------------------------------------------------------------GEEG--------EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP-GTTER-----------------VCLVQGTAE---------------------------------------------------------------------------------------------------------ALNAVHSFIAEKV-------REIPQAMTKPEVVNILQPQTTMN-------PDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQ--------------------------------------KPEGINLQERVV-----------------TVSGEPEQVHKAVSAIVQKVQE----DPQSSSCLNISYA------------------------------------------------------------------------------------------------------------------------------------------------------------NVAGPVANSNPTGSPYAS-PADVLPAAAAASARAASGLLGPAGLAGVG--------------AFTATLPAFSGTDLLAISTALNTLASYGYNTNSLGLGLNSAAASGVLAAVAAGANPAAAAAANLLASYAGEAGAGPAGGAAPPPPPPPGALGSFALAAAANGYLGAGAGGGAG-GGGGPLVAAAAAAGAAGGFLTAEKLAAESA-----KELVEIAVPENLVGAIL-----GKGGKTLVEYQELTGARIQIS-KKGEFLPG-----------TRN-RR----------------------------------------VTI-----------------------------------------------TGS-PAATQ----AAQYLISQRVTYEQGVRAS-----------------------------------NPQKVG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [498] 'gi|5902724|ref|NP 002507.1| neuro-oncological ventral antigen 2 [Homo sapiens] >gi|3851553|gb|AAC72355.1| RNA-binding protein N' -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEPEAPDSRKRPLETPPEVVCTK-------RSNT--------------------------------------------------------------------------------GEEG--------EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP-GTTER-----------------VCLVQGTAE---------------------------------------------------------------------------------------------------------ALNAVHSFIAEKV-------REIPQAMTKPEVVNILQPQTTMN-------PDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQ--------------------------------------KPEGINLQERVV-----------------TVSGEPEQVHKAVSAIVQKVQE----DPQSSSCLNISYA------------------------------------------------------------------------------------------------------------------------------------------------------------NVAGPVANSNPTGSPYAS-PADVLPAAAAASAAAASGLLGPAGLAGVG--------------AFPAALPAFSGTDLLAISTALNTLASYGYNTNSLGLGLNSAAASGVLAAVAAGANPAAAAAANLLASYAGEAGAGPAGGAAPPPPPPPGALGSFALAAAANGYLGAGAGGGAG-GGGGPLVAAAAAAGAAGGFLTAEKLAAESA-----KELVEIAVPENLVGAIL-----GKGGKTLVEYQELTGARIQIS-KKGEFLPG-----------TRN-RR----------------------------------------VTI-----------------------------------------------TGS-PAATQ----AAQYLISQRVTYEQGVRAS-----------------------------------NPQKVG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [492] 'gi|71023653|ref|XP 762056.1| hypothetical protein UM05909.1 [Ustilago maydis 521] >gi|46101621|gb|EAK86854.1| hypothetical prot' MGTIGIPVKLIHEAVGHVITVELKGGAAYRGTLYDAEDNFNIAMKDITVTAPDGKQSHLENVYIRGNMLRFIIVPDMLQQAPMFKRIGPNAMKGRGIGSARGRATVLRGEFCVHLGFPCLCKPTDVLTVPAFSFSQLQHKHDADEADHRIQAAVALLALDHPFADKRSLGSSTITDNLASLFRQTHCRIPRYCRFRAGSCAVTADEARTSTELCDSDAIRKALPTPQLSQLLCWIDDIQARLWHPKEMQLFSIHLPSSVEDERRHATFRCLLANKLKLDETSLYWCIAASPLYPSWALVWRACVSTSVSLLWFRHQAAITKARRSRDCRLATRGKEESVNAITMRTIVNVDSHEGISVTESFAENSRSPLFARSRYPFIYIFNQRALVLRQQSHLHQSAASSSPTILRYNGNQSKSPFFGSTAFASLGQTMSEVAKRQRDTSSTPEPEAKRPYVDAEKNADHRTSFSSATTADKSPS---------------------------------------------------------------------------------------TTRTMASDTLPKPVSEEKDAVDLGSVTADATSSNDIKVDNGSVSNGHDGDQVAGSAGSVGD-SSETQAT--------QISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNIS---EIIP-GNPER-----------------ILTVSGPLD---------------------------------------------------------------------------------------------------------AVSKAFGLIVRRI-------NDEPFDL---------ASVPGSK----------SVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGARLTAGE--------------------------------------AMLP-GSTERVL-----------------SISGVADAVHIAVYYVGSILLE----HPDRN---------------------------------ANNLPYRPT-----------------------------------------------------------------------------------------------------------------------------------AGGPSTRAG-AAGANPYAAPQQPFGYGAPAAGF-------------------GGAPAGAGGAPQ-------------------------------------------------------------------------------------------------------LP------------------------PG-------SQTQQIFIPNDLVGCII-----GKGGSKINEIRSMSASHIKIM-EPGAGIAAGG---------SGNERL----------------------------------------VTI-----------------------------------------------TGP-PPNIQ----MAVSLLYQRLEQEKMRLAQ-----------------------------------GGAP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [850] 'gi|73996207|ref|XP 857309.1| PREDICTED: similar to poly(rC) binding protein 2 isoform 3 [Canis familiaris]' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDTGV-IEGGLNV--------TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS---EG---NCPER-----------------IITLAGPTN---------------------------------------------------------------------------------------------------------AIFKAFAMIIDKL-------EEDISSS---------MTNSTAA-------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAI-----------------TIAGIPQSIIECVKQICVVMLE----S---P---------------------P--------KG--VTIPYRPKPSSSPVIFAGG-------------------Q----------------------------------------------------------------------------------------------AYTIQGQY-AIPQPD-LTKLHQLAMQQSHF-PMTH-GNT-GFS-------------------AGLDASAQ------------------------------------------------------------------------------------------------------------------------------------------TTSHELTIPNDLIGCII-----GRQGAKINEIRQMSGAQIKIA-NPVE---------------GSTDRQ----------------------------------------VTI-----------------------------------------------TGS-AASIS----LAQYLINVSLENAKPSSQA-----------------------------------ASVTIPDHLSINLSQPSTPSSSSSSSTTTPSLATAGTSDAPSSLPNPLPTAPCVSSLLGMKPIPLLALNVVSAAKGTGASATTTTTSAVPCVTNKLKGEKQRFSPY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [423] 'gi|76617792|ref|XP 883866.1| PREDICTED: similar to poly(rC) binding protein 2 isoform 17 [Bos taurus] >gi|73996231|ref|XP 85779' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDTGV-IEGGLNV--------TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS---EG---NCPER-----------------IITLAGPTN---------------------------------------------------------------------------------------------------------AIFKAFAMIIDKL-------EEDISSS---------MTNSTAA-------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG--------------------------------------DMLP-NSTERAI-----------------TIAGIPQSIIECVKQICVVMLE----S---P---------------------P--------KG--VTIPYRPKPSSSPVIFAGG-------------------Q----------------------------------------------------------------------------------------------AYTIQGQY-AIPQPD-LTKLHQLAMQQSHF-PMTH-GNT-GFS-------------------AGLDASAQ------------------------------------------------------------------------------------------------------------------------------------------TTSHELTIPNDLIGCII-----GRQGAKINEIRQMSGAQIKIA-NPVE---------------GSTDRQ----------------------------------------VTI-----------------------------------------------TGS-AASIS----LAQYLINVRLSS------------------------------------------------------------------------------------------------------------------ETGGMGSS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [318] 'gi|4235140|gb|AAD13116.1| RNA-binding protein Nova-2 [AA 29-492]; astrocytic NOVA-like RNA-binding protein [Homo sapiens]' ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EEG--------EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP-GTTER-----------------VCLVQGTAE---------------------------------------------------------------------------------------------------------ALNAVHSFIAEKV-------REIPQAMTKPEVVNILQPQTTMN-------PDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQ--------------------------------------KPEGINLQERVV-----------------TVSGEPEQVHKAVSAIVQKVQE----DPQSSSCLNISYA------------------------------------------------------------------------------------------------------------------------------------------------------------NVAGPVANSNPTGSPYAS-PADVLPAAAAASAAAASGLLGPAGLAGVG--------------AFPAALPAFSGTDLLAISTALNTLASYGYNTNSLGLGLNSAAASGVLAAVAAGANPAAAAAANLLASYAGEAGAGPAGGAAPPPPPPPGALGSFALAAAANGYLGAGAGGGAG-GGGGPLVAAAAAAGAAGGFLTAEKLAAESA-----KELVEIAVPENLVGAIL-----GKGGKTLVEYQELTGARIQIS-KKGEFLPG-----------TRN-RR----------------------------------------VTI-----------------------------------------------TGS-PAATQ----AAQYLISQRVTYEQGVRAS-----------------------------------NPQKVG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [464] ; END; BEGIN CODONS; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE=unord PolyTcount=MINSTEPS ; EXSET * UNTITLED = 1-1401 1406-1410 1416 1432 1434-1435 1437-1497 1501-1547 1551 1557-1560 1567-1930; END; BEGIN MacClade; Version 4.0 87; LastModified -1035721319; FileSettings editor '0' '0' '1' '1'; Singles 100; Editor 00011001111111100100010010 '1' '8' Geneva '10' '490' '1' all; EditorPosition '44' '69' '1027' '1169'; TreeWindowPosition '46' '6' '1131' '1550'; ListWindow Characters closed Geneva '9' '50' '10' '273' '366' 000; ListWindow Taxa closed Geneva '9' '50' '10' '177' '490' 100000000; ListWindow Trees closed Geneva '9' '50' '10' '276' '490' ; ListWindow TypeSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow ExSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow CharSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow TaxSets closed Geneva '9' '50' '10' '276' '490' ; 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