#NEXUS [MacClade 4.08 registered to Masaki Ishikawa, ERATO Hasebe Project] BEGIN DATA; DIMENSIONS NTAX=93 NCHAR=831; FORMAT DATATYPE=PROTEIN SYMBOLS = " 1 2 3 4" MISSING=? GAP=- ; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] 'gi|15223075|ref|NP 177178.1| CYCD1;1; cyclin-dependent protein kinase regulator [Arabidopsis thaliana] >gi|28950911|gb|AAO63379' ---------------------------------------------------------------------------------------------------------------------------------------------------MRSYRFSDYLHMSVSFSNDMDLFCG--ED----SGV-FSGESTV-----------DFSSS------------------------------------------------------------EVD-S------------------------------------------WPGDSIACFI--EDER----HFV---PGHD-------------YLSRF-QT-RS----L--DA-SAREDSVAWILK---------------------VQ--AYYNFQPLTAYLAVNYMDRFLYARRLP---------E---T-SGWPMQLLAVACLSLAAKMEEILVPSLF-DFQ---VA-GVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKIDPSG-T----------FLGFFI--SHATEIILSNIK-------------------EASF-LEY---------WPSSIAAAAILCV--ANEL-PSL----SSVVNPHESPETWCDGLSKEKIVRCYRLMKAMAIE--------------------------------------------NNRLNTPKV-IAKLRVSVRASSTLTRPSDESSFS------------------------------SSSPCKRRKLSGYSWVGDETSTSN---------------------------- [339] 'gi|2995130|emb|CAA58285.1| cyclin delta-1 [Arabidopsis thaliana]' ---------------------------------------------------------------------------------------------------------------------------------------------------MRSYRFSDYLHMSVSFSNDMDLFCG--ED----SGV-FSGESTV-----------DFSSS------------------------------------------------------------EVD-S------------------------------------------WPGDSIACFI--EDER----HFV---PGHD-------------YLSRF-QT-RS----L--DA-SAREDSVAWILK---------------------VQ--AYYNFQPLTAYLAVNYMDRFLYARRLP---------E---T-SGWPMQLLAVACLSLAAKMEEILVPSLF-DFQ---VA-GVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKIDPSG-T----------FLGFFI--SHATEIILSNIK-------------------EASF-LEY---------WPSSIAAAAILCV--ANEL-PSL----SSVVNPHESPETWCDGLSKEKIVRCYRLMKAMAIE--------------------------------------------NNRLNTPKV-IAKLRVSVRASSTLTRPSDE----------------------------------SSSPCKRRKLSGYSWVGDETSTSN---------------------------- [335] 'gi|1076311|pir||S51650 cyclin delta-1 - Arabidopsis thaliana' ---------------------------------------------------------------------------------------------------------------------------------------------------MRSYRFSDYLHMSVSFSNDMDLFCG--ED----SGV-FSGESTV-----------DFSSS------------------------------------------------------------EVD-S------------------------------------------WPGDSIACFI--EDER----TFV---PGHD-------------YLSRF-QT-RS----L--DA-SAREDSVAWILK---------------------VQ--AYYNFQPLSAYLAVNYMDRFLYARRLP---------E---T-SGWPMQLLAVACLSLAAKMEEILVPSLF-DFQ---VA-GVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKIDLRV-P----------FSG-SL--SPMLQSILSNIK-------------------EASF-LEY---------WPSSIAAAAILCV--ANEL-PSL----SSVVNPHESPETWCDGLSKEKIVRCYRLMKAMAIE--------------------------------------------NNRLNTPKV-IAKLRVSVRASSTLTRPSDE----------------------------------SSSPCKRRKLSGYSWVGDETSTSN---------------------------- [334] 'gi|25989347|gb|AAL47479.1| cyclin D1 [Helianthus tuberosus]' -------------------------------------------------------------------------------------------------------------------------------------------------------------MSISCSDCFSDLLCC--ED----SGI-LSGD--------------DRPECSYDFEYSG----------------------------------------------------DFD-----------------------------------------------DSIAEFI--EQER----KFV---PGID-------------YVERF-QS-QV----L--DA-SAREESVAWILK---------------------VQ--RFYGFQPLTAYLSVNYLDRFIYCRGFP---------V---A-NGWPLQLLSVACLSLAAKMEETLIPSIL-DLQ---VE-GAKYIFEPKTIRRMEFLVLSVLDWRLRSVTPFSFIGFFSHKIDPSG-M----------YTGFLI--SRATQIILSNIQ-------------------EASL-LEY---------WPSCIAAATILCA--ASDL-SKF----SLI-NADHAE-SWCDGLSKEKITKCYRLVQSPKIL--------------------------------------------------PVH-VRVMTARV------STESGDSSSS----------------------------SSSPSPYKKRKLNNYSWIEEDKR------------------------------- [315] 'gi|6448480|emb|CAB61221.1| cyclin D1 [Antirrhinum majus]' -------------------------------------------------------------------------------------------------------------------------------------------------------------MSLSCSDCFSDLLCG--ED----SNI-IFSGGGD-----------DLPEYTSDVESIPT---------------------------------------------------DVD-----------------------------------------------ESIAGLL--EDER----DLA--------------------GVNSSSSN-QS----V--DS-STRTESTAWILK---------------------VQ--RYYGFQPLTAYLAVSYFDRFLNAHHLP---------K---L-NGWPMQLLSVACLSLAAKMEESLVPSLL-DLQ---VE-GANFIFEPRNIQRMELLVLRVLDWRLRSISPFCYLSFFALKIDPTG-T----------YTGFLT--SRAKEIILSTVQ-------------------ETSL-IEY---------RPSCIAAATMLSS--ANDL-PKF----SFI-TAQHAE-AWCDGLHKDNIASCIKLIQGVESN--------------------------------------------NRPKKQPKV-LPQLRVMTRA----SLASSESSSS----------------------------TSSSPSYKRRKLNNSSRADDDKESSDYGV------------------------- [330] 'gi|50900038|ref|XP 450807.1| putative cyclin D1 [Oryza sativa (japonica cultivar-group)] >gi|49387642|dbj|BAD25836.1| putative' --------------------------------------------------------------------------------------------------------------------------------------------------------------MPADDDDASYLLCA--ED----AGAAVFDVAVDISTCTT----------------------------------------------------------------------EDDECCSVGGEEL----------------------------------YSAASIAELI--GGEA----EYS---PRSD-------------YPDRL-RS-RS----I--DP-AARAESVSWILK---------------------VQ--EYNGFLPLTAYLAVNYMDRFLSLRHLPVFVLFPSMQE---G-QGWAMQLLAVACLSLAAKMEETLVPSLL-DLQASTVE-CSRYVFEPRTICRMEFLILTALNWRLRSVTPFTFIDFFACK-------------------------HISNAMVQNANS-------------------DIQF-LDH---------CPSSMAAAAVLCA--TGET-PSL----AFV-NPELAV-NWCIGLAEEGISSCYQLMQQLVIG---------------------------------------------NVQRSAAA-AAAV----------NLFSDEGLSY---------------------------DSSSPPPPKRRKRSPPGT------------------------------------- [320] 'gi|51535854|dbj|BAD37938.1| putative cyclin D1 [Oryza sativa (japonica cultivar-group)]' ------------------------------------------------------------------------------------------------------------------------------------------MMYKHVGDDARGSSAGVVCCVDVVDDDVDALLCG--ED----AGE-LEREGE--------------PAQGSSPSSSLSCAAAAAAAADDDDE-------------------------------------DEDEH------------------------------------------GVHGEVVQVTPGGEEHCYDYDYDVDVPV---------------GAELVMPACSPPRTAV--HR-PGWSESVSWILK---------------------VR--SVHGFQPATAYLAVSYMDRFMSSRSLP-------------D-HGWASQLLCVACLSLAAKMEESSAPPLL-DLQ---IE-GTRFIFEPRTIQRMELIVLVELDWRLRSVTPFAFVDFFACKVGSSG-R----------SSRILA--LRACQIILSAIH-------------------ELEF-LNH---------CASSMAAAAVLFA--VNES-PAAMSHRSSV-SSESAA-SWCIGLTEERISSCYQLLQRALNATA------------------------------------------RKRKRHPM--ILAACSSVT--------------------------------------------SSSSRSKRRKLDGHFGED----------------------------------- [363] 'gi|25809160|emb|CAD32542.1| cyclin D protein [Physcomitrella patens] >gi|26190151|emb|CAD21955.1| cyclin D [Physcomitrella pate' --------------------------------------------------------------------------------------------------------------------------------------------------------------MSPSVDCLASLYCA--ED----VSG-TAWNE-------------SEMCGAADRV----------------------------------FESQPAVFMDFPV--------EDD-----------------------------------------------EAIATLL--MKEA----QFM---PEAD-------------YLERY-QS-RK----L--SL-EARLAAIEWILK---------------------VH--SFYNYSPLTVALAVNYMDRFLSRYYFP---------E---G-KEWMLQLLSVACISLAAKMEESDVPILL-DFQ---VE-QEEHIFEAHTIQRMELLVLSTLEWRMSGVTPFSYVDYFFHKLGVSD-L----------LLRALL--SRVSEIILKSIR-------------------VTTS-LQY---------LPSVVAAASIICA--LEEV-TTI----RTG-DLLRTF--NELLVNVESVKDCYIDMRQSEIG----------PYCVRMGLKRKILH--------------------ASEPQSPVG-VLEAADV-------SSPSGTVLGF---------------SSRESSPDVTDSPPSTNSQRKRRKLCLHNESCLHVESASL--------------------------- [360] 'gi|1076312|pir||S51651 cyclin delta-2 - Arabidopsis thaliana' --------------------------------------------------------------------------------------------------------------------------------------------------------------------MAENLACG--ET----ASHGSLTTT------------------------------------------------------------------------------MMISTMAADFTNEIDYNHQLFAKDDNFGGNGSIPMMGSSSSS-----LSEDRIKEML--VREI----EFC---PGTD-------------YVKRL-LS-GD----L--DL-SVRNQALDWILK---------------------VC--AHYHFGHLCICLSMNYLDRFLTSYELP---------K---D-KDWAAQLLAVSCLSLASKMEETDVPHIV-DLQ---VE-DPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKISGH-------------VSENLI--YRSSRFILNTTK-------------------AIEF-LDF---------RPSEIAAAAAVSVSISGET--------ECI-DEEKAL-SSLIYVKQERVKRCLNLMRSLTGE------ENVRGTSLSQEQARVAV---------------------RAVPASPVG-VLEAT--CL-----SYRS-EERTV---ESCTNSSQS-----------SPDNNNNNNNSKQEEEKTMRENKRVIHCLLQPKTTSTHDI------------------- [383] lcl|Ppa_CYCD11_1_1_unnamed_protein_product --------------------------------------------------------------------------------------------------------------------------------------------------------------MSPSVDCLASLYCA--ED----VSG-TAWNE-------------SEMCGAADRV----------------------------------FESQPAVFMDFPV--------EDD-----------------------------------------------EAIATLL--MKEA----QFM---PEAD-------------YLERY-QS-RK----L--SL-EARLAAIEWILKVKYASF---------------VH--SFYNYSPLTVALAVNYMDRFLSRYYFP---------E---G-KEWMLQLLSVACISLAAKMEESDVPILL-DFQ---VE-QEEHIFEAHTIQRMELLVLSTLEWRMSGVTPFSYVDYFFHKLGVSD-L----------LLRALL--SRVSEIILKSIR-------------------VTTS-LQY---------LPSVVAAASIICA--LEEV-TTI----RTG-DLLRTF--NELLVNVESVKDCYIDMRQSEIG----------PYCVRMGLKRKILH--------------------ASEPQSPVG-VLEAADV-------SSPSGTVLGF---------------SSRESSPDVTDSPPSTNSQRKRRKLSLHNESCLHVESASL--------------------------- [366] 'gi|15227224|ref|NP 179835.1| CYCD2;1; cyclin-dependent protein kinase regulator/ protein binding [Arabidopsis thaliana] >gi|454' --------------------------------------------------------------------------------------------------------------------------------------------------------------------MAENLACG--ET----SESWIIDND------------------------------------------------------------------------------DDDINYGGGFTNEIDYNHQLFAKDDNFGGNGSIPMMGSSSSS-----LSEDRIKEML--VREI----EFC---PGTD-------------YVKRL-LS-GD----L--DL-SVRNQALDWILK---------------------VC--AHYHFGHLCICLSMNYLDRFLTSYELP---------K---D-KDWAAQLLAVSCLSLASKMEETDVPHIV-DLQ---VE-DPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKISGH-------------VSENLI--YRSSRFILNTTK-------------------AIEF-LDF---------RPSEIAAAAAVSVSISGET--------ECI-DEEKAL-SSLIYVKQERVKRCLNLMRSLTGE------ENVRGTSLSQEQARVAV---------------------RAVPASPVG-VLEAT--CL-----SYRS-EERTV---ESCTNSSQS-----------SPDNNNNNNNSNKRRRKQ----------------------------------------- [361] lcl|Ppa_CYCD11_2_1_unnamed_protein_product --------------------------------------------------------------------------------------------------------------------------------------------------------------MSPSVDCVASLYCA--ED----VSA-ATWGDED-----------SGKCAYLESV----------------------------------SELQPTVFLDFSV--------EDD-----------------------------------------------DAVSTLL--LKEA----QYM---PEPD-------------YSERY-HS-RE----L--SN-GARLDAVRWIQK---------------------VQ--AFYNYSPLTVALAVNYMDRFLSRHHLP---------E---G-KDWMLQLLSVSCISLAAKMEESEVPILL-DLQ---VE-QQEHIFEAHTIQRMELLVLSTLEWRMSVVTPFSYIDYFFHKLGISE-L----------LLRALL--SRVSEIIMKAIE-------------------DTTF-LQY---------LPSVVAAASLIFS--LEEV-TAL----HTD-DLIRIF--SDLSVDVDAIKDCYHDMQVAVMD----------PYCQGPSLKRKALR--------------------GSEPQSPIG-VLEAAAL-------SSATEGTLGF---------------SSRESSPGICDLPPSTFPQRKRRKLSLDDDTSTLLERTHL--------------------------- [362] 'gi|1770190|emb|CAA71244.1| cyclin-D like protein [Chenopodium rubrum]' ------------------------------------------------------------------------------------------------------------------------------------------------------------------MAPSFDLLCA--ED----NSS-IFDEVDDNYYGV-----------------------------------------------------------------------VDDDVLQICNLQQQHGNLRNFDDFTLILLIIIKEHNFEALISGFFV-ANHECLASLF--DNER----QHF---LGLD-------------YLKRF-RN-GD----L--DL-GARNLVIDWIHK---------------------VQ--SHYNFGPLCVYLSVNYLDRFLSAYELP-------------G-KAWMMQLLGVACLSLAAKVDETDVPLIL-DLQ---VS-ESKFVFEAKTIQRMELLVLSTLKWRMQSVTPFSFIDYFLYKLSGDK-M----------PSKSLI--FQAIQLILSTIK-------------------GIDL-MEF---------RPSEIAAAVAISV--TQQT--------QIVEFTDKAFSFLTDHVEKERLMKCVEIMHDLRMS----------------SRSNGALAS-------------------TSVPQSPIG-VLDASA-CL-----SYKS-DDTSTTPSGSCGNSAHS---------------SPASAPPPKRRKLDRTSQIS----------------------------------- [372] 'gi|34906810|ref|NP 914752.1| putative D-type cyclin [Oryza sativa (japonica cultivar-group)] >gi|22296414|dbj|BAC10182.1| putat' -------------------------------------------------------------------------------------------------------------------------------------------------------------MGVLCFGASNILLCA--ED----SSS-VLGLGGF------------------------------------------------------------------------------------------GGGGGEVAAELGCGGGGGFDFFGFGGGAVFPI-DSDEFVALLV--EKEM----DHQ---PQRG-------------YLEKL-EL-GG----L--EC-SWRKDAIDWICK---------------------VH--SYYNFGPLSLYLAVNYLDRFLSSFNLP---------H---D-ESWMQQLLSVSCLSLATKMEETVVPLPM-DLQ---VF-DAEYVFEARHIKRMELIVMKTLKWRLQAVTPFSFIGYFLDKFNEGK-P----------PSYTLA--SWCSDLTVGTLK-------------------DSRF-LSF---------RPSEIAAAVVLAV--LAEN--------QFL-VFNSALGESEIPVNKEMVMRCYELMVEKALV------KKIRNSNAS-----------------------------SSVPHSPIT-VLDAA--CF-----SFRS-DDTTL---GSSQSNSNN-----------KDYNSQDSAPASKRRRLNTTPI------------------------------------- [356] 'gi|19070611|gb|AAL83926.1| D-type cyclin [Zea mays]' ------------------------------------------------------------------------------------------------------------------------------------------------------------MVP-GYDCAASVLLCA--ED----NAA-ILG--------------------------------------------------------------------------------LDDDGEESSW-AAAATPPRDTVAAAAAT-----GVAVDGILTEFPL-LSDDCVATLV--EKEV----EHM---PAEG-------------YLQKLQRRHGD----L--DLAAVRKDAIDWIWK---------------------VI--EHYNFAPLTAVLSVNYLDRFLSTYEFP---------E---G-RAWMTQLLAVACLSLASKIEETFVPLPL-DLQ---VA-EAKFVFEGRTIKRMELLVLSTLKWRMHAVTACSFVEYFLHKLSDHG-A----------PSLLAR--SRSSDLVLSTAK-------------------GAEF-VVF---------RPSEIAASVALAA--IGEC--------RSS-VIERAA-SSCKYLDKERVLRCHEMIQEKITA------GSIVLKSAGSSI--------------------------SSVPQSPIG-VLDAAA-CL-----SQQS-DDATV---------------------G-SPAVCYHSSSTSKRRRITRRLL------------------------------------- [358] 'gi|42362309|gb|AAS13370.1| cyclin d2 [Glycine max]' --------------------------------------------------------------------------------------------------------------------------------------------------------------MAPSFDFASSLLCT--ED----STV------------------------------------------------------------------------------------FDESHNNGGTIMTAMGVYEDTRSPR--------RPHFDEEPDDLPL-LSDESLVMMV--EKEC----QHW---SGLR-------------YLNKF-QT-GD----L--DF-GARMEAIDWIHK---------------------VR--SHFGFGPLCGYLSINYLDRFLFAYELP---------K---G-RVWTMQLLAVACVSLAAKLDETEVPLSL-DLQ---VG-ESKFLFEAKTIQRMELLVLSTLKWRMQAITPFTFLDYFLCKINDDQ-S----------PLRSSI--MRSIQLISSTAR-------------------GIDF-LEFKPSEIAAAVKPSEIAAAVAMYV--MGET--------QTV-DTGKAISVLIQHVEKERLLKCVQMIQELSCN--------------SGSAKDSSASV-------------------TCLPQSPIG-VLDAL--CF-----NYKS-DDTNA---SSCVNSSHN-------------------SPVAKRRKLNKTCGAEQL--------------------------------- [361] 'gi|78217447|gb|ABB36799.1| D-type cyclin [Zea mays]' ------------------------------------------------------------------------------------------------------------------------------------------------------------MVP-GYDCAASVLLCA--ED----NAA-VLG--------------------------------------------------------------------------------LDD---ESSW-AAAATPPRDTVVAAAAA-----GVAVDGFLTEFPL-LSDDCVAALV--EKEV----EHM---PAEG-------------YLQKLQRRHGD----L--DLAAVRKDAVDWIWK---------------------VI--EHYSFAPLTAVLSVNYLDRFLSTYDFP---------E---G-RAWMTQLLAVACLSLASKIEETFVPLPL-DLQ---VA-EAKFVFEGRTIKRMELLVLRTLKWRMHAVTACSFVEYFLHKLSDHG-A----------PSLLAR--SRSSDLVLSTAK-------------------GAEF-VVF---------RPSEIAASVALAA--IGEC--------SSS-VIERAA-TSCNYLDKERVLRCHEMIQEKIAV------GSIVLKSAGSSI--------------------------SSVPRSPIG-VLDAAA-CL-----SQQS-DDATV---------------------G-SPAVCYHSSSTSKRRRITRRLL------------------------------------- [355] 'gi|54043089|gb|AAV28532.1| D-type cyclin [Saccharum officinarum]' ------------------------------------------------------------------------------------------------------------------------------------------------------------MAPSSYEMAASILLCA--ED----SSS-ILDLEA------------------------------------------------------------------------------EAEEEEVMLARSSRTRG--------------------DPSVVFPV-PSEECVAGFV--EAEA----AHM---PRED-------------YAERL-RG-GG----M--DL-RVRMDAVDWIWK---------------------VH--AYYGFGPLTACLAVNYLDRFLSLYQLP---------E---G-KAWTTQLLSVACLSLAAKMEETYVPPSL-DLQ---IG-DARYVFEAKTIQRMELLVLSTLKWRMQAVTPFSYIDYFLHRLNGGD-A----------PSRRAV--LRSAELILCTAR-------------------GTHC-LDF---------RPSEIAAAVAAAV--AGEE--------HAV-DIDKAC--CTHRVHKERVSRCLEAIQATVALP-------------------------------------------GTVPRSPTG-VLDAAG-CL-----SYRS-DDTAV---AAAAAASHASSSSWCDEDD-----DSSPVVCSKRRKISR---------------------------------------- [343] 'gi|50945843|ref|XP 482449.1| putative cyclin D1 [Oryza sativa (japonica cultivar-group)] >gi|25553718|dbj|BAC24951.1| putative' -------------------------------------------------------------------------------------------------------------------------------------------------MGAPATAASGGGDDDDRDVVFEYLLCT--EEDAASAGS-FFQQLQG-----------PAPAVSSSPSTTTATAPAAAGSCDDGGEE------------------------------------EEEEV------------------------------------------WTVDVVAELIGGEAER----SHS---PRAD-------------YPGRL-RSGRP----A--DL-AARADSVAWILK---------------------VR--ELYGMLPVTAYLAVSYMDRFLSLHRLP--------------------------------------------------ME-DARYIFEHRTIFRMELLVLDALDWRLRSITPFTFMYLFADKVDPNG-K----------HIRELI--HQATQVTLATIH-------------------DTEF-LDH---------CPSSIAAAAVLCA--SSEI-MQL----VSI-DHGTLVSWRIIGLDEEAIIRCYRLMQQLISS--------------------------------------------NNVGRESTE-ITMATTTTT-----ATTAVSSEEV----------------------------VSSSPPSKRRKM------------------------------------------ [322] 'gi|19070615|gb|AAL83928.1| D-type cyclin [Zea mays]' ------------------------------------------------------------------------------------------------------------------------------------------------------------MAPSCYDAAASMLLCA--EE----HSS-ILWYDE------------------------------------------------------------------------------EEEELEAVGRRRGRSP----------------GYGDDFGADLFPP-QSEECVAGLV--ERER----DHM---PGPC-------------YGDRL-RG-GG----G--CL-CVRREAVDWIWK---------------------AY--THHRFRPLTAYLAVNYLDRFLSLSEVP---------D---G-KDWMTQLLAVACVSLAAKMEETAVPQCL-DLQ---VG-DARYVFEAKTVQRMELLVLTTLNWRMHAVTPFSYVDYFLNKLSNGGSTA---------PRSCWL--LQSAELILRAAR-------------------GTGC-VGF---------RPSEIAAAVAAAV--AGDV--------DDA---DGVENACCAHVDKERVLRCQEAIGSMASSAAIDGDATVPPKSAR-RRSSPVPVP-------------------VPVPQSPVG-VLDAAA-CL-----SYRS-EEAAT--ATATSAASHGPPGS--------SSSSSTSPVTSKRRKLASRCDGSCSDRSKRAPAQWTKE-------------------- [390] 'gi|33324661|gb|AAQ08041.1| cyclin D2 [Triticum aestivum]' ------------------------------------------------------------------------------------------------------------------------------------------------------------MVPSGYDCAASVLLCA--ED----NAA-ILG--------------------------------------------------------------------------------LDDDEEDCSWAAAAATPPRIAADAAA---------AAEGFLVDHPV-QSDECVAALV--ETEK----EHM---PADG-------------YPQMLLRRPGA----L--DLAAVRRDAIDWIWE---------------------VI--EHFNFAPLTAVLSVNYLDRFLSVYPLP---------E---G-KAWVTQLLAVACLSLASKMEETYVPLPV-DLQ---VV-EANSAFEGRTIKRMELLVLSTLKWRMQAVTACSFIDYFLRKFNDHD-A----------PSMLAF--SRSTDLILSTAK-------------------GADF-LVF---------RPSEIAASVALAA--FGER--------NTS-VVERAT-TTCKFINKERVLRCYELIQDKVAM------GTIVLKSAGSSM--------------------------FSVPQSPIG-VSDAAA-CL-----SQQS-DDTAV---------------------G-SPATCYQASSASKRRRIGR---------------------------------------- [353] 'gi|50946891|ref|XP 482973.1| putative D-type cyclin [Oryza sativa (japonica cultivar-group)] >gi|42408572|dbj|BAD09749.1| putat' ---------------------------------------------------------------------------------------------------------------------------------------------------------MAPSSSSCHDAAASMLLCA--ED----NSS-ILWL--------------------------------------------------------------------------------EDEEGEVGERRSGGCRSMVGDLAAGGGGGSG-GGGVEEEEDMFPR-QSEECVASLV--EREQ----AHM---PRAD-------------YGERLRGGGGD----V--DL-RVRSEAIGWIWE---------------------VY--TYYNFSSVTAYLAVNYLDRFLSQYELP---------E---G-RDWMTQLLSVACLSIAAKMEETVVPQCL-DLQ---IG-EPRFLFEVETIHRMELLVLTNLNWRMQAVTPFSYIDYFLRKLNSGN-A----------APRSWL--LRSSELILRIAA-------------------GTGF-LEF---------RPSEIAAAVAATV--AGEA--------TGV--VEEDIAEAFTHVDKGRVLQCQEAIQDHHYSMATI--NTVQPKPASTRRGSASASS-------------------SSVPESPVA-VLDAG--CL-----SYKS-DDTDA-----ATIASHGGGRR-------KSCFDSSPVTSKKRRKLSR---------------------------------------- [383] 'gi|50920917|ref|XP 470819.1| putative cyclin [Oryza sativa (japonica cultivar-group)] >gi|40539012|gb|AAR87269.1| putative cycl' ------------------------------------------------------------------------------------------------------------------------------------------------------MGFLCRRRSSAAPAESFSLLCE--ED----SES-VFGS-------------------------------------------------------------------------------DDDGVEETATMAPELGKMMSLGFSASHHLGDGGG-------------GGEELVGSFM--EKEV----EQMVETARGE-------------YLTKL-SN-GG----I--EL-SCRIAAIDWICK---------------------VQ--AYYSFGPLCAYLAVNYLDRFLSSVEFS---------N---D-MPWMQQLLIVACLSLAAKMEETAAPGTL-DLQ---VC-NPEYVFDAETIHRMEIIVLTTLKWRMQAVTPFTYIGHFLDKINEGN-R----------ITSELI--SRCTEIILSTMK-------------------ATVF-LRF---------RPSEIATAVALSV--VADG--------GRVLDFGGVLESSKLPVDKDNVGRCHQAMQEMALVM-------------------------------------------QNSTASPSG-VLDTS--CF-----TSKSDDDYSI----------------PGTSPQVDNNNNQACTPASKRARVEEAPMS------------------------------------ [358] 'gi|50900280|ref|XP 450928.1| cyclin [Oryza sativa (japonica cultivar-group)] >gi|46806319|dbj|BAD17511.1| cyclin [Oryza sativa' -----------------------------------------------------------------------------------------------------------------------------------------------------------MAALTSYEMAASILLCA--ED----SSS-VLGFGGE----------------------------------------------------------------------------EEEEEEDVVAGKRARCAGPPP------------PPCVDVAGVDFAV-PSEECVARLV--ETEA----DHM---PRED-------------YAERL-RA-GGGDGDL--DL-RVRMDAIDWIWK---------------------VH--SYYSFAPLTACLAVNYLDRFLSLYQLP---------D---G-KDWMTQLLAVACLSLAAKMEETDVPQSL-DLQ---VG-EERYVFEAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLRELNGGD-P----------PSGRSA--LLSSELILCIAR-------------------GTEC-LGF---------RPSEIAAAVAAAV--VGEE--------HAA----------FSHVNKERMSHCQEVIQAMELI---------HPKPSSPSRVFVS----------------------SSIPRSPTG-VLDAAG-CL-----SYRS-DDSAV--------ASHYAASSWGYEHD-------SSPVSSKRRKISR---------------------------------------- [356] 'gi|4160298|emb|CAA09852.1| cyclin D2.1 protein [Nicotiana tabacum]' -----------------------------------------------------------------------------------------------------------------------------------------------------------MAADNIYDFVASNLLCT--ET----KSL-CF----------------------------------------------------------------------------------DDVDSLTISQQNIETKSKDLSFN---------NGIRSEPLIDLPS-LSEECLSFMV--QREM----EFL---PKDD-------------YVERL-RS-GD----L--DL-SVRKEALDWILK---------------------AH--MHYGFGELSFCLSINYLDRFLSLYELP---------R---S-KTWTVQLLAVACLSLAAKMEEINVPLTV-DLQ---VG-DPKFVFEGKTIQRMELLVLSTLKWRMQAYTPYTFIDYFMRKMNGDQ-I----------PSRPLI--SGSMQLILSIIR-------------------SIDF-LEF---------RSSEIAASVAMSV--SGEI--------QAK-DIDKAMPCFFIHLDKGRVQKCVELIQDLTTA-----------------TITTAAAA-------------------SLVPQSPIG-VLEAAA-CL-----SYKSGDERTV---GSCTTSSHT-----------------------KRRKLDTSSLEHGTSEKL----------------------------- [354] 'gi|15238462|ref|NP 201345.1| CYCD4;1; cyclin-dependent protein kinase regulator [Arabidopsis thaliana] >gi|9759622|dbj|BAB11564' ---------------------------------------------------------------------------------------------------------------------------------------------------------------MAEENLELSLLCT--ES-------------------------------------------------------------------------------------------NVDDEGMIVDETPIEIS---------------------IPQMGFSQSESEEIIMEMV--EKEK----QHL---PSDD-------------YIKRL-RS-GD----L--DLNVGRRDALNWIWK---------------------AC--EVHQFGPLCFCLAMNYLDRFLSVHDLP---------S---G-KGWILQLLAVACLSLAAKIEETEVPMLI-DLQ---VG-DPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQE----------PSNTLI--SRSLQVIASTTK-------------------GIDF-LEF---------RPSEVAAAVALSV--SGEL--------QRVHFDNSSFSPLFSLLQKERVKKIGEMIESDGS---------------------------------------------DLCSQTPNG-VLEVSACCF-----SFKTHDSSSSYTHLS----------------------------------------------------------------------------- [308] 'gi|21536631|gb|AAM60963.1| D-type cyclin [Arabidopsis thaliana]' ---------------------------------------------------------------------------------------------------------------------------------------------------------------MAEENLELSLLCT--ES-------------------------------------------------------------------------------------------NVDDEGMIVDETPIEIS---------------------IPQMGFSQSESEEIIMEMV--EKEK----QHL---PSDD-------------YIKRL-RS-GD----L--DLNVGRRDALNWIWK---------------------AC--EVHQFGPLCFCLAMNYLDRFLSVHDLP---------S---G-KGWILQLLAVACLSLAAKIEETEVPMLI-DLQ---VG-DPQFVFEAKSVQRMELLVLNRLKWRLRAITPCSYIRYFLRKMSKCDQE----------PSNTLI--SRSLQVIASTTK-------------------GIDF-LEF---------RPSEVAAAVALSV--SGEL--------QRVHFDNSSFSPLFSLLQKERVKKIGEMIESDGS---------------------------------------------DLFSQTPNG-VLEVSACCF-----SFKTHDSSSSYTHLS----------------------------------------------------------------------------- [308] 'gi|4688615|emb|CAB41347.1| D-type cyclin [Arabidopsis thaliana]' ---------------------------------------------------------------------------------------------------------------------------------------------------------------MAEENLELSLLCT--ES-------------------------------------------------------------------------------------------NVDDEGMIVDETPIEIS---------------------IPQMGFSQSESEEIIMEMV--EKEK----QHL---PSDD-------------YIKRL-RS-GD----L--DLNVGRRDALNWIWK---------------------AC--EVHQFGPLCFCLAMNYLDRFLSVHDLP---------S---G-KGWILQLLAVACLSLAAKIEETEVPMLI-DLQ---VG-DPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQE----------PSNTLI--SRSLQVIASTTK-------------------GIDF-LEF---------RPSEAAAAVALSV--SGEL--------QRVHFDNSSFSPLFSLLQKERVKKIGEMIESDGS---------------------------------------------DLCSQTPNG-VLEVSACCF-----SFKTHDSSSSYTHLS----------------------------------------------------------------------------- [308] 'gi|4160300|emb|CAA09853.1| cyclin D3.1 protein [Nicotiana tabacum]' --------------------------------------------------------------------------------------------------------------------------------------------MA--------IEHNEQQELSQS-FLLDALYCEEEEE----KWG-DLVDDE-------------TIITP--LSSEVTTTTTTTTKPNS-------------------LLPLLLLEQDL-FW-------EDE----------------------------------------------E--LLSLF--SKEK----ETHC-------------------WFNSF-QD-DS----L--LC-SARVDSVEWILK---------------------VN--GYYGFSALTAVLAINYFDRFLTSLHYQ---------K---D-KPWMIQLAAVTCLSLAAKVEETQVPLLL-DFQ---VE-DAKYVFEAKTIQRMELLVLSSLKWRMNPVTPLSFLDHIIRRLGLRN-N----------IHWEFL--RRCENLLLSIMA-------------------DCRF-VRY---------MPSVLATAIMLHV--IHQV-EPC----NSV-DYQNQL-LGVLKINKEKVNNCFELISEVCSK--------------PISHKRK---Y-------------------ENPSHSPSG-VIDP--IYS-----SESSNDSWDL-----------ESTSS--------------YFPVFKKSRVQEQQMKL-------------ASSISRVFVE-AVGSP-----H [373] 'gi|22091622|emb|CAD43141.1| cyclin D2 [Daucus carota]' -------------------------------------------------------------------------------------------------------------------------------------------------------MRFTRVYTEVFNMTDHSLLCT--ET----NNL-CFDDLE-----------------------------------------------------------------------------ARDDQDPRIDCENVVGN------------------ESEALICAVPL-QRDEDFVFVF--ESKV----NFC---PEVI-------------FSTD--RS-GE----L--DL-CVRKEALDWIYK---------------------AH--AHYNFGALSVCLAVNYLDRFLSLYELP---------S---G-KKWTVQLLAVACLSLAAKMEEVNVPLTV-DLQ---VA-DPKFVFEAKTIKRMELLVLSTLKWRMQACTPCSFIDYFLRKINNADAL----------PSGSLI--DRSIQFILKTMK-------------------GIDF-LEF---------RPSEISAAVAICV--TREA--------QTL-DINKAM-SNIIPVEKDRVFKCIEMIQDLTLV------TETSNVASGRTR--------------------------AQVPQSPVG-VLDAA--CL-----SYKS-DERTV---GSCPNSSLH----------------TETSPHTKRRKLIEIMKCGFYSITQFQIFSEWEFWCGCLCKRPPL--------- [382] 'gi|33517434|gb|AAQ19973.1| cyclin D3-1 [Euphorbia esula]' ------------------------------------------------------------------------------------------------------------------------------------------------------------MANHSPLFLYDALYCS--EED---NWE-GEVVDI-------------------FHEQEDQGENTS-------------------------VFPQNSSPVDL-NW-------EED----------------------------------------------E--LTSVF--SKQE----QNQ--------------------LYKKL-EI-NP----C--LA-KSRRDAVDWMMK---------------------VN--AHYSFTALTSVLAVNFLDRFLFSFDLQ---------T---E-KPWMTQLTAVACLSLAAKVEETQVPLLL-DLQ---VV-DSKYVFEAKTIQRMELLVLSTLQWRMNPVTPLSFIDYMTRRLGFKD-Y----------LCWEFI--RRCELIVLSIIS-------------------DMRF-IPY---------LPSEIASAIMLHV--INGI-EPS----LGD-EFETQL-FGILGIDKEKVNNCREMIIELGSR-----------YYGNQSNKRK---Y-------------------GSDPGSPNC-VMDV--SFS-----SDNSNDSWAV-----------GSKSSS-----VSSS------PAAKKLRAVSGMNHENAIILS----------------------------- [350] lcl|Smo_CYCD11_1_1_unnamed_protein_product -----------------------------------------------------------------------------------------------------------------------------------------------------------------MECQDGGLFCT--EE----MIG-SPWSGDS-----------AEVLDESPDNADLAALTDFPP-------------------------------------------------------------------------------------------RDDAALQSVV--SRER----SQT---LGDG-------------YLLAL-QR-DA----S--VL-HARAVAVNWMLK------------------LQ-VR--NVYAFSPMTAALASSYLDRYLSRHLPK---------S---L-KAWAIQLLSIACISLAAKMEEIVVPCLP-DLQ---VE-GLEHVFEAKTIQRMELVVLKTLDWRMCGVTAFEYVDDLLYRLDISK-H----------LKASIL--ARITELILGTLS-------------------EPEF-LVF---------RPSAIALAAFSCA--LDEI-VPL----KAA-TYQRVL-LMALPTDQATLHQCYRLIEDLIID------PVCPGVSLGQTFGS------------------------SKSPPSPMT-VIDLYQ--------AGGGGSSSSM--------------------------DWCGSQVNLKKRRIEVESQS------------------------------------ [339] 'gi|4586801|dbj|BAA76478.1| NtcycD3-1 [Nicotiana tabacum]' ---------------------------------------------------------------------------------------------------------------------------------------------------MGIQHNEHNQDQTQS-FLLDALYCE--EE----RWE-ETIEDE-------------------ILEKEATL-----------------------------PLPLPLLEQDL-FW-------EDE----------------------------------------------E--LLSLF--TKEK----ETIS-------------------NFETI-KT-DP----L--LC-LSRKEAVKWILK---------------------VN--AHYGFSTFTAILAINYFDRFLSSLHFQ---------K---D-KPWMIQLVAVTCLSLAAKVEETQVPLLL-DFQ---VE-DAKYVFEAKTIQRMELLVLSSLKWRMNPVTPLSFVDHIIRRLGLKS-H----------IHWEFL--KQCERILLLVIA-------------------DCRF-LSY---------MPSVLATATMLHV--IHQV-EPC----NAA-DYQNQL-LEVLNISKEKVNDCYELITEVSYN--------------SISHKRK---Y-------------------ESPINSPSA-VIDT--FYS-----SENSNESWDL-----------QTSSSIP----STYSPRDQFLPLFKKSRVQEQQMRL--------------TSLSRVFVDYAVGSP-----R [368] 'gi|15235254|ref|NP 195142.1| CYCD3;1; cyclin-dependent protein kinase regulator [Arabidopsis thaliana] >gi|62320771|dbj|BAD9543' --------------------------------------------------------------------------------------------------------------------------------------------MA-----IR-KEEESREEQSNS-FLLDALYCE--EE----KWD-DEGEEV--------------------------EENSSLSS--------S-------------SSPFVVLQQDL-FW-------EDE----------------------------------------------D--LVTLF--SKEE----EQGL----------------------SC-LD-DV----Y--LS-TDRKEAVGWILR---------------------VN--AHYGFSTLAAVLAITYLDKFICSYSLQ---------R---D-KPWMLQLVSVACLSLAAKVEETQVPLLL-DFQ---VE-ETKYVFEAKTIQRMELLILSTLEWKMHLITPISFVDHIIRRLGLKN-N----------AHWDFL--NKCHRLLLSVIS-------------------DSRF-VGY---------LPSVVAAATMMRI--IEQV-DPF----DPL-SYQTNL-LGVLNLTKEKVKTCYDLILQLPVD------RIGLQIQIQSSKKRKSHDS-------------------SSSLNSPSC-VIDANPFNS-----DESSNDSWSA-----------SSCNPPTSS--SSPQ----QQPPLKKMRGAEENEKK--------------KPILHLPWA-IVATP------ [376] 'gi|2995134|emb|CAA58287.1| cyclin delta-3 [Arabidopsis thaliana]' --------------------------------------------------------------------------------------------------------------------------------------------MA-----IR-KEEESREEQSNS-FLLDALYCE--EE----KWD-DEGEEV--------------------------EENSSLSS--------S-------------SSPFVVLQQDL-FW-------EDE----------------------------------------------D--LVTLF--SKEE----EQGL----------------------SC-LD-DV----Y--LS-TDRKEAVGWILR---------------------VN--AHYGFSTLAAVLAITYLDKFICSYSLQ---------R---D-KPWMLQLVSVACLSLAAKVEETQVPLLL-DFQ---VE-ETKYVFEAKTIQRMELLILSTLEWKMHLITPISFVDHIIRRLGLKN-N----------AHWDFL--NKCHRLLLSVIS-------------------DSRF-VGY---------LPSVVAAATMMRI--IEQV-DPF----DPL-SYQTNL-LGVLNLTKEKVKTCYDLILQLPVD------RICLQIQIQSSKKRKSHDS-------------------SSSLNSPSC-VIDANPFNS-----DESSNDSWSA-----------SSCNPPTSS--SSPQ----QQPPLKKMRGAEENEKK--------------KPILHLPWA-IVATP------ [376] 'gi|27435851|gb|AAO13248.1| cyclin D [Populus tremula x Populus tremuloides]' ----------------------------------------------------------------------------------------------------------------------------------------------MASMYNPETSAVQDQQQNPT-LLYDALYCS--EE----NWV-EEVRED-------------------WFQDELEGESYCSNNSNKL------------------NTFPILLEQDL-SW-------EDE----------------------------------------------E--LSSLF--AKEE----QNQ--------------------LCKDL-ET-NP----S--LA-RARCEAVEWILK---------------------VN--EHYSFTALTAVLAVNYLDRFLFSVHLQ---------K---E-KPWMAQLAAVSCLSLAAKVEETQVPLLL-DFQ---VE-DSKYVFEAKTIQRMEILVLSTLKWKMNPVTPISFLDYITRRLGLEH-Y----------LCLEFL--KRCERMVLSILA-------------------DSRS-MPY---------VPSVMAAATMLYV--IDNI-EPS----LAA-EYQSQL-LSILGIDKDKVEDCSKFLMEFALR------DHFK----LLSNKRK---F-------------------CSLPGSPSG-VVDV--SFS-----SDSSNDSWSV-----------ASSVS------SSPK------PLSKKSRALQSLNNATTSDFSQHSSPVP---------------------- [376] 'gi|6434199|emb|CAB60837.1| CycD3;2 [Lycopersicon esculentum]' --------------------------------------------------------------------------------------------------------------------------------------------MA-------------IENNDQS-FFLDVLYCEEEEE----KWG-DLLEDEE-----------GVIINPLLLSSEGTTKTNSLL-----------------------LLPLLLLEQDL-FW-------EDE----------------------------------------------E--LLSLF--VKEK----ETRC-------------------CFESF-GS-DP----F--LC-SARVDVVEWILK---------------------VN--AHYDFSALTAILAINYLDRFLSSLQFQ---------K---D-KPWMTQLAAVTCLSLAAKVEETQVPLLL-DFQ---VE-DAKYVFEAKTIQRMELLVLSSLKWRMNPVTPLSFLDHIIRRLGLKN-N----------VHWEFL--RRCESLLLSVMI-------------------DCRF-VRY---------MPSVLATAIMLHV--IHQI-EPC----NAI-DYQNQL-LGVLKISKENVNNCYELISEVSSK-------------PITSHKRK---Y-------------------DENPSSPSG-VIDP--IYT-----SESSNDSWDL------------------------------DLPSFKKSKVQEQQMKM-------------SSSLSRVFVE-AVGSP-----H [364] 'gi|27362900|gb|AAN87006.1| cyclin D [Populus alba]' ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EE----NWA-EEVRED-------------------WFQDELEGESYCSNNSNKL------------------NTFPILLEQDL-SW-------EDE----------------------------------------------E--LSSLF--AKEE----QNQ--------------------LCKDL-ET-NP----S--LA-RARCEAVEWILK---------------------VN--EHYSFTALTAVLAVNYLDRFLFSVHLQ---------K---E-KPWMAQLAAVSCLSLAAKVEETQVPLLL-DFQ---VE-DSKYVFEAKTIQRMEILVLSTLKWKMNPVTPISFLDYITRRLGLEH-Y----------LCLEFL--KRCERMVLSILA-------------------DSRS-MPY---------VPSVMAAATMLYV--IDNI-KPS----LAA-EYQSQL-LSILGIDKDKVEDCSKFLMEFALR------EHFK----LLSNKRK---F-------------------CSLPG--------------------------------------------------------------------------------------------------------------- [289] 'gi|15229665|ref|NP 190576.1| CYCD3;3; cyclin-dependent protein kinase [Arabidopsis thaliana] >gi|17380632|gb|AAL36079.1| AT3g50' --------------------------------------------------------------------------------------------------------------------------------------------MA---------LEEEEESQNAPFCVLDGLFCE--EE----SEF-HEQ------------------------------VDLCDESVEKFP-----------------FLNLGLSDHDM-LW-------DDD----------------------------------------------E--LSTLI--SKQE----PC---------------------LYDEI-LD-DE----F--LV-LCREKALDWIFK---------------------VK--SHYGFNSLTALLAVNYFDRFITSRKFQ---------T---D-KPWMSQLTALACLSLAAKVEEIRVPFLL-DFQ---VE-EARYVFEAKTIQRMELLVLSTLDWRMHPVTPISFFDHIIRRYSFKS-H----------HQLEFL--SRCESLLLSIIP-------------------DSRF-LSF---------SPSVLATAIMVSV--IRDL-KMC----DEA-VYQSQL-MTLLKVDSEKVNKCYELVLDHSPS-----------------KKRMMNW--------------------MQQPASPIG-VFDA--SFS-----SDSSNESWVV-----------SASASVS----SSPS----SEPLLKRRRVQEQQMRL--------------SSINRMFFDVLSSSP-----R [361] 'gi|30683167|ref|NP 196606.3| CYCD4;2; cyclin-dependent protein kinase [Arabidopsis thaliana] >gi|48958515|gb|AAT47810.1| At5g10' ----------------------------------------------------------------------------------------------------------------------------------------------------------------MAEFMEPNLVSN------------------------------------------------------------------------------------------------FDDEKSNSVDTR---S---------------------IFQMGFPL-ESEEIVREMI--EKER----QHS---PRDD-------------YLKRL-RN-GD----L--DF-NVRIQALGWIWK---------------------AC--EELQFGPLCICLAMNYLDRFLSVHDLP---------S---G-KAWTVQLLAVACLSLAAKIEETNVPELM-QLQ---VG-APMFVFEAKSVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQE----------PHSRLV--TRSLQVIASTTK-------------------GIDF-LEF---------RASEIAAAVALSV--SGEH------------FDKFSFSSSFSSLEKERVKKIGEMIERDGS---------------------------------------------SSSSQTPNNTVLQFKSRRY-----SHSL-STASV---SSSLTSLS----------------------------------------------------------------------- [298] 'gi|15240257|ref|NP 201527.1| CYCD3;2; cyclin-dependent protein kinase [Arabidopsis thaliana] >gi|20259812|gb|AAM13253.1| cyclin' --------------------------------------------------------------------------------------------------------------------------------------------MA--------LEKEEEASQNGAFCVLDGLYCE--EE----TGF-VEDDLD--------------------DDGDLDFLEKSDESVV--------------------KFQFLPLLDMF-LW-------DDD----------------------------------------------E--ILSLI--SKEN----ETNP-------------------CFGEQ-IL-DG----F--LV-SCRKEALDWVLR---------------------VK--SHYGFTSLTAILAVNYFDRFMTSIKLQ---------T---D-KPWMSQLVAVASLSLAAKVEEIQVPLLL-DLQ---VE-EARYLFEAKTIQRMELLILSTLQWRMHPVTPISFFDHIIRRFGSKW-H----------QQLDFC--RKCERLLISVIA-------------------DTRF-MRY---------FPSVLATAIMILV--FEEL-KPC----DEV-EYQSQI-TTLLKVNQEKVNECYELLLEH-----------------NPSKKRMMN---------------------LVDQDSPSG-VLDF----------DDSSNSSWNV-----------STTASVSSSS-SSPE------PLLKRRRVQEQQMRL--------------PSINRMFLD-VLSSP-----R [367] 'gi|6448482|emb|CAB61222.1| cyclin D3a [Antirrhinum majus]' -----------------------------------------------------------------------------------------------------------------------------------------------------------MYQQNSPSLCFDALYCE--EE----QNW-DNGEII----------------NDCFIEEQ--------------------------------EPFSDLLKHDL-LCGVDDDDDDKE----------------------------------------------E--LSSLL--CKEQ----EYE--------------------LYRVL-ED-NP----S--LA-KARDEAVEWMFK---------------------VI--GYYSFSALTAVLAVNYLDRFLCTFQFQ---------Q---D-KPWMYQLAAVACLSLAAKVEETQVPLLL-DLQ---VE-ESKYVFESKTIQRMELLVLSTLKWKMNPVTPISFLEYIARRLALKS-H----------LCKEFL--NRCECLLLSLIT-------------------DCRF-MCH---------LPSALATATMLYV--ISSL-EPC----IGV-EYQDQL-INILGINKDKVEECCKLIQEVATS------VHF-----QSGNKRK---F-------------------GSLPYSPKG-VVDI--SFS-----CD---DSWPL-----------DSTASVS----SSPE------HLSKKIKTQNPD-------------------------------------H [343] 'gi|89111299|dbj|BAE80324.1| cyclin D3-1 [Camellia sinensis]' ----------------------------------------------------------------------------------------------------------------------------------------------MAQPQPQPQPQPQQQQQNLP-FVLDALYCQ--EQ----HLE-GGETED-------------------YFDSEEEDCHYSDNIVS--------------------PKPPQLLEQDL-FW-------EDE----------------------------------------------E--LTSLL--SKEQ----ENP--------------------LFHSL-ET-DP----S--LG-GARRAAVEWLLK---------------------VN--AHYSFSALTAVLAVNYLDRFLFSFHFQ---------R---E-KPWMTQLAAVACLSLAAKVEETEVPLLL-DLQ---VE-DSRYVFEAKTIQRMEMLILSTLQWKMNPVTPLSFLDHITRRLGLKN-R----------LCCEFL--KRCESILLCIIS-------------------DSRF-MLY---------LPSVLSTATMLLV--FSSL-EPC----LAV-EYQNQL-LGILQIDKDKVEDCYKLMLESTSG-------------IHQSNKRK---F-------------------RSMPGSPNC-VTDV--CFS-----SDSSNDSWAV-----------TSSASASASVCSSPE------PLSKKSRAQDHNATADILSFHC---------------------------- [371] 'gi|21745138|gb|AAM77273.1| cyclin D3.1 protein [Lagenaria siceraria]' ---------------------------------------------------------------------------------------------------------------------------------------------------------------MVPPYALDSLYCS--ED----HWE-NDDEEE---------------------ERGFHEQPYSNLTTESS------------------SPILAVAEQDL-FW-------END----------------------------------------------E--LISLF--SREK----PNE--------------------LFKTI-QI-DP----S--LA-AARRSAVGWMLK---------------------VN--AHYSFSALTAVLAVDYLDRFLSCFHFQ---------R---D-KPWMSQLAAVACISLAAKVEETQVPLLL-DLQ---VE-DSRYLFEAKTIKKMELLVLSTLQWRMNPVTPFSFVDYISRRLGFKE-H----------ICWEIL--WQCERTILSVIL-------------------ESDF-MSF---------LPSVMATATMLHV--FKAMEEPT----LSV-EYDSQL-LNILGIDKGNVEECCKLISNASRR------NG------NQFKKRK---I-------------------GSIPGSPNG-VMDV--SFS-----SDSSNDSWSV-----------ASSVS------SSPE------PLTKKNRANGSMSGD---------------------------CETFRTLS [352] 'gi|6434201|emb|CAB60838.1| CycD3;3 [Lycopersicon esculentum]' --------------------------------------------------------------------------------------------------------------------------------------------MS-----HH-YQEQEQLEAQKIPFLLDSLYCE--EN----NIL-TEVSIE----------------------------------------------------------TESFSSHDL-LW-------EEE----------------------------------------------E--LTSLF--SKET----EYEI-------------------SYNVL-EK-NQ----S--FI-SSRRESVEWILK---------------------TT--AYYSFSAQTGFLAVNYFDRFLL-FSFN---------QSLNH-KPWMNQLVAVTCLSLAAKVEETDVPLLL-DLQ---VE-ESGFLFESKTIQRMEMLILSTLKWKMNPVTPFSFLDFITRRLGLKH-C----------LSLEFL--RRCEKVLLYTIT-------------------DDRF-IGY---------LPSAMASATMLHV--LDRL-KPC----IGE-KYQDQL-LGILGIVKEKVEGCYRLIQEVACN------IDFG------SNKRK---F-------------------GTLPGSPTG-VMDM--SFS-----SDYSNDSWSV-----------ATSVT------SSPE------PLSKKIRESNE--------------------------------------- [336] 'gi|89111301|dbj|BAE80325.1| cyclin D3-2 [Camellia sinensis]' --------------------------------------------------------------------------------------------------------------------------------------------MK----RMSPYPEQDSHLQNPM-FVFDGLYCE--EE----HFE-DDLGEY-------------------GLEQG---SDNCDENV---------------------KGPLVFLEHDW-DW-------DDD----------------------------------------------E--LVSLI--SKEK----ETHL-------------------GLSVL-NS-DE----S--LM-VARRESVDWILR---------------------VI--AHYGFTVLTTVLAVNYFDRFISSLSFQ---------R---E-KPWMSQLVAVACLSLAAKVEETQVPLLL-DFQ---VE-ESKFVFEAKTIQRMELLVLSTLQWKMNPVTPLSFVDHIVRRFGFKT-N----------LHLEFL--WRCERLLLSAIT-------------------DSRF-GCY---------LPSVLAAATMLHV--IKEV-EPS----NVL-DCQNEL-MDVLKMSKDKVDDCYKLILELPGN------NSQMQ---CQTHKRK---Y-------------------QSIPNSPNG-VIDV--NFS-----CDSSNDSWAV-----------TSSVS------SSPE------PLFKKSRVHGQQMRL--------------APLRHMSVG-VVGSP-----R [372] lcl|Smo_CYCD11_6_1_unnamed_protein_product ------------------------------------------------------------------------------------------------------------------------------------------------------------------MDFGDVLFCN--EE----ILG-SPCEGNN-----------AAVDFSGDNTSDEPVLLH-----------------------------------------------FDD----------------------------------------------AVLLSSIV--QRES----GHL---PDAG-------------YFAVL-RS-ED----V--IS-SARSNAVYWMMKVERSFLPIHPSLMFVSFDLMQVR--NVYSFSPLTIALAVNYFDRYLSKQLLR---------T---W-KAWMIELLTVACLSLAAKMEEPDVPMLQ-DLQ---IE-GLDHIFESKTIQRMEIAVMKLLGWRMGSVTPFSYIEGLLQNLDVSR-N----------MKLSLL--NRTSEVLVKMLP-------------------EMDF-LAF---------PPSVVSLAAMSCA--LEEL-LPL----RAE-ALKGSL-AKILPTPQDQLRRCYRLMEELVVD------PLCPLLSVSQVLEN------------------------RKASPSPYS-NGEVSQTGE-----SYPDWDESGK---------------------------AQHACSKSVKRKLDEFLKAEG---------------------------------- [359] 'gi|25989349|gb|AAL47480.1| cyclin D3 [Helianthus tuberosus]' --------------------------------------------------------------------------------------------------------------------------------------------MA-------------ILSPYSS-SFLDTLFCN--EQ----QDH-EYHEYE--------------------YEDEFTQTTLTDSSD---------------------LHLPPLDQLDL-SW-------EHE----------------------------------------------E--LVSLF--TKEQ----EQQKQTPC---------------TLSFG-KT-SP----S--VF-AARKEAVDWILK---------------------VK--SCYGFTPLTAILAINYLDRFLSSLHFQ---------E---D-KPWMIQLVAVSCLSLAAKVEETQVPLLL-DLQ---VE-DTKYLFEAKNIQKMELLVMSTLKWRMNPVTPISFLDHIVRRLGLTD-H----------VHWDFF--KKCEAMILCLVS-------------------DSRF-VCY---------KPSVLATATMLHV--VDEI-DPP----NCI-DYKSQL-LDLLKTTKDDINECYELIVELAYD------HHNK----RKHDANE---T-------------------TTNPVSPAG-VID---FTC-----DESSNESWEL-----------NAHHF--------------REPSFKKTRMDSTIRVRVWFTYKL---------------------------- [357] 'gi|33517432|gb|AAQ19972.1| cyclin D3-2 [Euphorbia esula]' -----------------------------------------------------------------------------------------------------------------------------------------------------------MEDSTQISLIFDGLYCE--EQ----GIG-EDFDDG------------------------------NEDYVKKEL-----------------SLSSVLLEQDL-FW-------TDD----------------------------------------------E--LLNLI--SKEK----ETHF-------------------SFGDF-SS-HG----S--LM-VARKEAIDWILR---------------------VK--GFYGFNALSCVLAVNYFDRFISSLVFT---------R---D-KPWMGQLAAVACLSLAAKMEETQVPLLL-DLQ---VE-ESKYVFEAKTIKRMELLVLSTLQWRMNPVTPICYFDHIIRRLGLKN-H----------LHWEFL--RRCELLLLSVIS-------------------DSRF-MSY---------APSILATSIMIHV--IKEV-DPF----SQM-EYQNQL-LDVIKINKEEVNQCYKLILELSGK-------------QDQGYKRK---Y-------------------PSRPGSPNG-VIDA--YFS-----GDSSNDSWGV-----------SSSIS------SSPS-----IPRFKRIKSQDQQMRL--------------PSINRMFVD-VLSSP-----H [355] 'gi|44889865|gb|AAS48460.1| cyclin D3-2 [Euphorbia esula]' -----------------------------------------------------------------------------------------------------------------------------------------------------------MEDSTQISLIFDGLYCE--EQ----GIV-EDFDDG------------------------------NEDYVKKEL-----------------SLSSVLLEQDL-FW-------TDD----------------------------------------------E--LLNLI--SKEK----ESHF-------------------SFGNF-SS-DG----S--LM-VARKEAIDWILR---------------------VK--GFYGFNALSCVLAVNYFDRFISSLVFT---------R---D-KPWMGQLAAVACLSLAAKMEETQVPLLL-DLQ---VE-ESKYVFEAKTIKRMELLVLSTLQWRMNPVTPICYFDHIIRRLGLKN-H----------LHWEFL--RRCELLLLSVIS-------------------DSRF-MSY---------APSILATLIMIHV--IKEV-DPF----SQM-EYQNQL-LDVIKINKEEVNQCYKLILELSGK-------------QDQGFKRK---Y-------------------PSRPGSPNG-VIDA--YFS-----GDSSNDSWGV-----------SSSIS------SSPS-----IPRFKRIKSQDQQMRL--------------PSINRMFVD-VLSSP-----H [355] 'gi|3608179|dbj|BAA33153.1| cyclin D [Pisum sativum]' --------------------------------------------------------------------------------------------------------------------------------------------MA----IHHHHHHHQQLHHN---SLLDALYCD--EE----KLE-EEQEDV-----------------------SSQQSDVTTNNDNNILDSTS-------------LFPLLLLEQNL-FS-------QDE----------------------------------------------E--LTTLF--SKEK----TQQETYYE---------------DLKNV-VD-FV----S--LS-QPRREAVQWMLK---------------------VN--AHYAFSPLTATLAVTYFDRFLLTFHFQ---------K---D-KPWMIQLVAVTCISLAAKVEETQVPLLL-DLQ---VQ-DTKYVFEAKTIQRMELLILSTLKWKMHPVTPHSFLDHIITRLGLKT-N----------LHWEFL--RRCENLLLSVLL-------------------DSRF-VGC---------VPSVLATATMLHV--IDQI-EES--DDNGV-DYKNQL-LSILKINKEKVDECYNAIVEVTNE------NNY-------GHKRK---Y-------------------EQIPGSPSG-VIDA--VFS-----SDGSNDSWKV-----------GSSSY------STSE------PVFKKTKTQGQNRNL--------------SPLNRVIVG-ILATASATTSP [384] 'gi|70568824|dbj|BAE06272.1| cyclin D [Scutellaria baicalensis]' --------------------------------------------------------------------------------------------------------------------------------------------------MVSEFQEHESLLQN---PIFDALYCD--EE----RFD-ECVGGA---------------------GSGFKEPEINDFNEIHN------------------NPFAFLFEHDL-FW-------ESE----------------------------------------------E--LDALL--TKEKT---QTHL-------------------TFDEI-NS-DA----S--LK-AMRNEAINWMLK---------------------VI--AHYGFNALTAVLAVNYYDRFITSVCFQ---------K---D-KPWMSQLAAVACLSVAAKVEETQVPLLL-DLQ---VE-ESKYLFEAKTIQRMELLVLSTLQWRMNPVTPISFFDHIARRFEFVK-N----------LHSVFL--RRCESLILSIIT-------------------DCRL-VKY---------FPSVIASAAMIYA--IREF-ETP----DAL-EYEDQL-LSVLRTSKDKVDDCRKLIVDAMYG----------GFSHKPCYKRK---Y-------------------ESIPSSPSG-VIDA--YLS-----SDSSVDSWAV-----------TLSVS------SSPE------PSFKRSKAQDQHMRL--------------APLSSVSLGLAHRIN------ [372] 'gi|5679622|emb|CAB51788.1| cyclin D3.1 [Lycopersicon esculentum] >gi|6434197|emb|CAB60836.1| CycD3;1 [Lycopersicon esculentum]' --------------------------------------------------------------------------------------------------------------------------------------------MV---------FPLDSQLQNPISALLDGLYCE--ED----RFL--DDDLG----------------------EWS-SLDVGNENV---------------------KKTLPLLECDM-FW-------EHD----------------------------------------------E--LATLL--SKEN----EFHL-------------------GFQSL-IS-DG----S--LM-GARKEALDWMLR---------------------VI--AYYGFTATTAVLAVNYFDRFVSGWCFQ---------K---D-KPWMSQLAAVACLSIAAKVEETQVPLLL-DLQ---VA-DSRFVFEAKTIQRMELLVLSTLKWKMNLVTPLSFIDHIMRRFGFMS-N----------LHMDFL--KKCERLILDIIT-------------------DSRL-LHY---------PPSVIATASMFYV--INDI-EPS----NAM-EYQNQL-MSVLKVRKDIFEECHDLILELMDT------ACYKL---CQSLKRK---H-------------------HSVPGSPSG-VIDA--YFS-----SESSNESWSV-----------ASSIS------SSPE------PQYKRNKTQDQRMTL--------------APLGS--------NL-----H [359] 'gi|7671459|emb|CAB89399.1| cyclin protein-like [Arabidopsis thaliana]' ----------------------------------------------------------------------------------------------------------------------------------------------------------------MAEFMEPNLVSN------------------------------------------------------------------------------------------------FDDEKSNSVDTR---S---------------------IFQMGFPL-ESEEIVREMI--EKER----QHS---PRDD-------------YLKRL-RN-GD----L--DF-NVRIQALGWIWK---------------------AC--EELQFGPLCICLAMNYLDRFLSVHDLP---------S---G-KAWTVQLLAVACLSLAAKIEETNVPELM-QLQ---VG-APMFVFEAKSVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQE----------PHSRLV--TRSLQVIASTTKGDRLGLFFFKGVLIVDVWAGIDF-LEF---------RASEIAAAVALSV--SGEH------------FDKFSFSSSFSSLEKERVKKIGEMIERDGS---------------------------------------------SSSSQTPNNTVLQFKSRRY-----SHSL-STASV---SSSLTSLS----------------------------------------------------------------------- [317] 'gi|42362319|gb|AAS13371.1| cyclin d3 [Glycine max]' --------------------------------------------------------------------------------------------------------------------------------------------MA-----IQHHNEQLEHNENVS-SVLDALYCD--EG----KWE-DEEEEE----------------------E?YEESEVTTNTGTS-------------------LFPLLMLEQDL-FW-------EDE----------------------------------------------E--LNSLF--SKEK----VQHEEAYDYNNLNSDDNSNDHSNNNNNV-LS-DS----C--LS-QPRREAVEWILK---------------------VN--AHYGFSALTATLAVTYLDRFLLSFHFQ---------R---E-KPWMIQLVAVTCISLAAKVEETQVPLLL-DLQ---VQ-DTKYVFEAKTIQRMELLVLSTLKWKMHPVTPLSFLDHIIRRLGLKT-H----------LHWEFL--RRCEHLLLSVLL-------------------DSRF-VGC---------LPSVLATATMLHV--IDQI-KHN----GGM-EYKTQL-LSVLKISKEKVDECYNAILQLSKA------NKYGHNNINNTSKRK---Y-------------------EQIPSSPSG-VIDA--AFC-----SDGSNDSWAV-----------GSSLLY-----SPPE------PLFKKSRTQGQQMNL--------------SPLKRFIIG-IVGTP-----P [396] 'gi|1150932|emb|CAA61334.1| cyclin [Medicago sativa]' --------------------------------------------------------------------------------------------------------------------------------------------MA----IHHHHHNHQQLQQHTS-SLFDALYCD-EEE----KWEDDDEGEV---------------------VDEGAQSDVTTTN-YDILDSTS-------------LLPLLLLEQNL-FN-------EDE----------------------------------------------E--LNTLF--SKEI----TQQETYYE---------------DLKNV-IN-FD----S--LS-QPRREAVEWMLK---------------------VN--AHYGFSALTATLAVNYLDRFLLSFHFQ---------K---E-KPWMIQLVAVTCISLAAKVEETQVPLLL-DLQ---VQ-DTKYVFEAKTIQRMELLILSTLKWKMHPVTTHSFLDHIIRRLGLKT-N----------LHWEFL--RRCENLLLSVLL-------------------DSRF-VGC---------VPSVLATATMLHV--IDQI-EQS--DDNGV-DYKNQL-LNVLKISKEKVDECYNAILHLTNA------NNY-------GHKRK---Y-------------------EEIPGSPSG-VIDA--VFS-----SDGSNDSWTV-----------GASSY------STSE------PVFKKTKNQGQNMNL--------------SPINRVIVG-ILATATS---P [386] 'gi|4583990|emb|CAB40540.1| cyclin D3 [Medicago sativa]' --------------------------------------------------------------------------------------------------------------------------------------------MA----IHHHH------QQHTC-SLFDALYCD--EE----KWE-DDEGEV---------------------VDEGEQSDVTTTN-YDILDSTS-------------LLPLLLLEQNL-FN-------EDE----------------------------------------------E--LNTLF--SKEK----IQQETYYE---------------DLKNV-IN-FD----S--LS-QPRREAVEWMLK---------------------VN--AHYGFSALTATLAVNYLDRFLLSFHFQ---------K---E-KPWMIQLVAVTCISLAAKVEETQVPLLL-DLQ---VQ-DTKYVFEAKTIQRMELLILSTLKWKMHPVTTHSFLDHIIRRLGLKT-N----------LHWEFL--RRCENLLLSVLL-------------------DSRF-VGC---------VPSVLATATMLHV--IDQI-EQS--DDHGV-DYKNQL-LNVLKTSKEKVDECYNAILHLTNA------NNY-------GHKRK---Y-------------------EEIPGSPSG-VIDA--VFS-----SDGSNDSWTV-----------GASSY------STSE------PVFKKTKNQGQNMNL--------------SPINRVIVG-ILATATS---P [378] 'gi|29374148|gb|AAO72990.1| cyclin D [Populus alba]' ---------------------------------------------------------------------------------------------------------------------------------------------------MSFLQQQETHNQSPA-LALDGLYCE--ED----GFG-EDYSCG----------------------LDDETSQVYDQNVKKEQ-----------------NLSSVLLEQDL-FW-------EDS----------------------------------------------E--LLSLI--SKEK----ETHV-------------------VFDSVGSR-DG----S--LM-VVRREAVEWFLR---------------------VK--AHYGFSALTGVLAVNYFDRFISSSRFR---------R---D-KPWMGQLAAVACLSLAAKVEETQVPLLL-DLQ---VE-DAKYVFEAKTIKRMELWVLSTLHWRMNPVTSISFFDHIIRRLGLKT-H----------MHWEFL--WRCERLLLSVIS-------------------DSRF-MSY---------LPSILATATMLHV--IKEV-EPR----NQL-QYQTQL-MAVLKTNEDEVNECYRLILEQPGS-------------QNQRHKRK---Y-------------------LSTPSSPNG-VIDA--SFS-----SENSNDSWAV-----------ASSIS------SSSS-----VPQFKRSRAQVQQMRL--------------PSLNRMCVD-VLSSP-----H [371] 'gi|33772250|gb|AAQ54560.1| cyclin D3 [Malus x domestica]' ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P-----------------IKAPILVEQGL-FW-------DNE----------------------------------------------E--LISLL--SKES----EQNE-------------------LQKPL-QI-SP----S--LA-GARREAVDWMLR---------------------VA--SHYSFSALSAVLAADYFDGFLSSLQLQ---------V---E-KPWMTQLAAVACISLAAKVEETQVPLLL-DFQ---VE-DSKYVFEARTIKRMEILVLSTLQWKMNPVTPISFIDYITRRLGLKN-H----------LCWEVL--KRCELVLLSLIS-------------------DSRF-MSF---------LPSVVATAIMLHV--VNNI-EPC------------LL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [213] 'gi|20384779|gb|AAK54466.1| cyclin D3 [Helianthus annuus]' --------------------------------------------------------------------------------------------------------------------------------------------MA-------------ILSRYSS---SNTLFCI--EE----QVH-EDEDEL----------------------------THQDSSA-----------------------IHPLDLQDL-CW-------EHE----------------------------------------------E--LVSLF--TKEE----EQQKQTP----------------------WP-SS----C--TL-SFRKEAVDWILK---------------------VK--GCHGFTPLTAILAINYLDRFLSSLHFQ---------KA--N-TPWMIHLVAVTCLSLAAKIQETHVPLLL-DLQ---LE-ESKFLFEAKNIQKTELLVMSTLKWRMNLVTPISFLDHIVRRLGLSN-H----------LHWDFF--KKCEAMILYLVA-------------------DSRF-VCY---------KPSVLATATMLCV--VEEI-DPT----NSI-GYKSQL-LDLLKTTKDHINECYKLVMDLSYD------NHNK----GKRDENE---R-------------------TIYPVSPAG-FIG---FMC-----HESSNDS------------------------------------------------------------------------------------- [308] 'gi|54873555|gb|AAV41032.1| cyclin D-like protein [Nicotiana tabacum]' --------------------------------------------------------------------------------------------------------------------------------------------MV---------FPLDTQLLNPI---FDGLFCE--ED----RFL-DDDDLG----------------------EWSCTLEQVENNV---------------------KKTLPLLECDM-FW-------EDD----------------------------------------------Q--LVTLL--AKEK----ESHL-------------------GFDCL-IS-DG----DGLLV-EVRKEALDWMLR---------------------VI--AHYGFTAMTAVLAVNYFDRFVSGLCFQ---------K---D-KPWMSQLAAVACLSIAAKVEETQVPLLL-DLQ---VA-DSRFVFEAKTIQRMELLVLSTLKWKMNPVTPLSFIDHIMRRFGFMS-N----------LHLDFL--RRCERLILGIIT-------------------DSRL-LYY---------SPSVIATAVMFFV--INEI-EPC----NAM-EYQNQL-MSVLKVKQDSFEECHDLILELMGT------PGYNI---CQSLKRK---H-------------------QSVPGSPSG-VIDA--YFS-----CDSSNDSWSV-----------ASSIS------SSPE------PQYKRMKTQDQTMTL--------------APLSSVSVV-VGSSP-----R [367] 'gi|4160302|emb|CAA09854.1| cyclin D3.2 protein [Nicotiana tabacum]' --------------------------------------------------------------------------------------------------------------------------------------------MV---------FPLDTQLLNPI---FDVLYCE--ED----RFL-DDDDLG----------------------EWSSTLEQVGNNV---------------------KKTLPLLECDM-FW-------EDD----------------------------------------------Q--LVTLL--TKEK----ESHL-------------------GFDCL-IS-DG----DGFLV-EVRKEALDWMLR---------------------VI--AHYGFTAMTAVLAVNYFDRFVSGLCFQ---------K---D-KPWMSQLAAVACLSIAAKVEETQVPLLL-DLQ---VA-DSRFVFEAKTIQRMELLVLSTLKWKMNPVTPLSFIDHIMRRFGFMT-N----------LHLDFL--RRCERLILGIIT-------------------DSRL-LHY---------PPSVIATAVVYFV--INEI-EPC----NAM-EYQNQL-MTVLKVKQDSFEECHDLILELMGT------SGYNI---CQSLKRK---H-------------------QSVPGSPSG-VIDA--YFS-----CDSSNDSWSV-----------ASSIS------SSPE------PQYKRIKTQDQTMTL--------------APLSSVSVV-VGSSP-----R [367] 'gi|21745140|gb|AAM77274.1| cyclin D3.2 protein [Lagenaria siceraria]' -----------------------------------------------------------------------------------------------------------------------------------------------MKKMALHSNKHRTQRLHNSLFFFDFLHCT--EQ----QHL------------------------------QTEHPIFLNNGGTNDF-----------------PLFQQTTTHFL-VY-------EDE----------------------------------------------E--LNHLL--SKEK----DQNLQTGA---------------VLKTLVQT-DN----A--LS-LARTEAIDWLLK---------------------VN--AFYGFSSLTALLAINYLDRILSGPYFQ---------R---D-KPWMLQLAAVTCISLAAKVEEIRVPLLL-DLQ---VE-DSKYIFEAKTIQRMELLVLTALQWKMHPVAPVSFLGIITKGLGMKNQY----------IQREFL--RRCERILLSLVS-------------------DSRS-VGI---------LPSIMAVSAMVSV--VEEM-GNC----NPLEEFQDQL-LNALKINKGRVKECCKVIMEAKIK---------------GSGKRKHVEEEAEAEAESESSEAETEGEAEAEAGSPNG-VMEA--NFS-----CESSNDSWEM-----------GTIVSEYTHFSSSSS------SSSKRIRPTR---------------------------------------- [380] 'gi|6448484|emb|CAB61223.1| cyclin D3b [Antirrhinum majus]' ---------------------------------------------------------------------------------------------------------------------------------------------------MLFSHSQQTHLQN---PIFDALLCN--EE----HFD-EDLDLG-------------------SGLKDPGFINQIHHNQKKEE-----------------PFTTFLFEHDL-LW-------EDD----------------------------------------------E--LVNLL--SKEK----EQEQQAHL---------------GYDDVMDS-DG----F--LK-RVRNEGIKWMLK---------------------VI--GHYGFNAMTAVLAVNYYDRFITNVGFQ---------K---D-KPWMSQLAAVACLSV--KVEETQVPLLL-DFQ---VE-ESKYVFEAKTIQRMELLVLTTLKWKMNPVTPISFFDHIVRRFELMN-N----------VQCEFM--KRCESVILSIIT-------------------DYRF-VRY---------LPSVVAAATMIYV--IKEL-YPC----DAL-EYQNEF-VTVLRTSKEKTDDCHMLITEVINN------QSY-----ILCHKRK---Y-------------------GSIPSSPNG-VIDA--YFS-----SDGSNDSWSA-----------VSSVS------SSPE------PVFKRIRAIGGANPP----------------------------------H [361] lcl|Smo_CYCD11_7_1_unnamed_protein_product -----------------------------------------------------------------------------------------------------------------------------------------------------------------MECQDGGLFCT--EE----MIG-SPWSGDS-----------AEVLDESPDNADLAALTDFPP-------------------------------------------------------------------------------------------RDDAALQSVV--SRER----SQT---LGDG-------------YLLAL-QR-DA----S--VL-HARAVAVNWMLKVKQCGFKSTFFSSPHSRKLQ-VR--NVYAFSPMTAALASSYLDRYLSRHLPK---------S---L-KAWAIQLLSIACISLAAKMEEIVVPCLP-DLQ---VE-GLEHVFEAKTIQRMELVVLKTLDWRMCGVTAFEYVDDLLYRLDISK-H----------LKASIL--ARITELILGTLS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------? [239] 'gi|19070613|gb|AAL83927.1| D-type cyclin [Zea mays]' -------------------------------------------------------------------------------------------------------------------------------------------------------MGDAAASTSAPTTPTSILICL--ED-----GSDLLADADD-----------GAGTDLVVARDERLLVV------------------------------------------------DQD----------------------------------------------EEYVALLL--SKES----ASGGGGPVEE------------------MED-------W--MK-AARSGCVRWIIK---------------------TT--AMFRFGGKTAYVAVNYLDRFLAQRRVN---------R---E-HAWGLQLLMVACMSLATKLEEHHAPRLS-ELP---LD-ACEFAFDRASVLRMELLVLGTLEWRMVAVTPFPYISCFAARFRQDE-------------RRAVL--VRAVECVFAAIR-------------------AMSS-VEY---------QPSTIAVASILVA--RGRE-TPA----GNLDALKAILGSSFPQLDTGHVYSCYSAMIREDDKSPTQSTS-------------------------------------TSTGVASSGVSVAAHAGGS-----GSPSPPGASV---------------SVGANNAAGTAPPATTDNRNKRRRLRSPQRQ------------------------------------ [349] 'gi|77556958|gb|ABA99754.1| Cyclin, N-terminal domain, putative [Oryza sativa (japonica cultivar-group)]' --------------------------------------------------------------------------------------------------------------------------------------------------------MSMEEAEECSAACGFSLTCQ--E-----------DGADL-----------GDGVVDDDDDGDVFLFYNAVAAAD-----------------------------------------DEEEE--------------------------------------------EEYVEQMV--SKEASFCCSSSSSLFDAAAGDG---------YGDGDGDG--------DWFR-QARLAAVKWILE---------------------TR--GYFGFGHRTAYLAIAYFDRFCLRRRVD---------R---EAMPWAARLLSIACVSVAAKMEEYQSPALS-EFD---AG--GGRVFCSDSIRRMELLVLSTLGWRMGAVTPFDFLPCFSSRLHRHHHGGAGAAGHGAAAAARVA--LNAVGFIFATAE-------------------AGSV-LDY---------RPSTVAAAAILAA--SYGAPLTK----EALESKMSNL-SPSCLIDKENVHACYSMMVGDMNNN-------------------------------------------RRSSKRPLQ---------------CSDSNEITTT-----------STYDSVLVDDVTDTA-AFAATAMNKRLRPEPPRIR------------------------------------ [365] 'gi|79326417|ref|NP 001031802.1| CYCD5;1; cyclin-dependent protein kinase [Arabidopsis thaliana]' --------------------------------------------------------------------------------------------------------------------------------------------------------------MGEPKDSLALFLCHESE---------SSLNEDD-----------DETIERSDKQEPHFTTT------------------------------------------------IDD----------------------------------------------EDYVADLV--LKENL--------------------------RFETL-PS-KT----T--SS-SDRLIAIDWILT---------------------TR--TRFGFQHQTAYIAISYFDLFLHKRFIG---------K---D-ETWAMRLLSVACLSLAAKMEERIVPGLS-QYP----Q-DHDFVFKPDVIRKTELLILSTLDWKMNLITPFHYFNYFLAKISQDNHSV---------SKDLVL--LRSSDSLLALTK-------------------EISF-TEY---------RQFVVAAVTTLLA--SSSTSSDIRLTREEIANKFGSI-SWWTSNENENVYLCYQRTLEIEER--------------------------------------------KHMTPPPEI-AVSREPPAS-----GSGAKRRLSF-------------------------DDSDQSSPPAKRMRRL----------------------------------------- [321] 'gi|22329219|ref|NP 195478.2| CYCD5;1; cyclin-dependent protein kinase [Arabidopsis thaliana] >gi|44917541|gb|AAS49095.1| At4g37' --------------------------------------------------------------------------------------------------------------------------------------------------------------MGEPKDSLALFLCHESE---------SSLNEDD-----------DETIERSDKQEPHFTTT------------------------------------------------IDD----------------------------------------------EDYVADLV--LKENL--------------------------RFETL-PS-KT----T--SS-SDRLIAIDWILT---------------------TR--TRFGFQHQTAYIAISYFDLFLHKRFIG-------LQK---D-ETWAMRLLSVACLSLAAKMEERIVPGLS-QYP----Q-DHDFVFKPDVIRKTELLILSTLDWKMNLITPFHYFNYFLAKISQDNHSV---------SKDLVL--LRSSDSLLALTK-------------------EISF-TEY---------RQFVVAAVTTLLA--SSSTSSDIRLTREEIANKFGSI-SWWTSNENENVYLCYQRTLEIEER--------------------------------------------KHMTPPPEI-AVSREPPAS-----GSGAKRRLSF-------------------------DDSDQSSPPAKRMRRL----------------------------------------- [323] 'gi|50428690|gb|AAT77041.1| putative Cyclin [Oryza sativa (japonica cultivar-group)]' ----------------------------------------------------------------------------------------------------------------------------------------------------------MEAEDEYSAGCSFSLMCQ--E-----D-STDLDDDGG-----------GGGCFAGDGRADLLLVYNAAAAAD-----------------------------------------DEDEE------------------------------------------EVEEYMDHLV--SKESSFCSSSS---STSSSSCC---------FSDAGGES-AAAAAPMDWFA-LARRATVKWILE---------------------TR--GCFGFCHRTAYLAIAYFDRFCLRRCID---------R---SVMPWAARLLAVACVSLAAKMEEYRAPALS-EFRAG-VG-DDGYEFSCVCIRRMELLVLSTLDWRMAAVTPFDYLPCLSSRLRRHV------------GGGGGA--GASAALIFSAAE-------------------AASV-LDH---------RPSTVAAAAVLAA--THGA-LTR----EALESKMSGL-SPSFLLDKEDVFACYSAMLSQPTSPASKSTT-------------------------------------TTTGKRSSS---------------SSCSESTDAA-----------SSYDATAA------SFPAAASCGSKRMRLELPGGILR---------------------------------- [367] lcl|Smo_CYCD11_2_1_unnamed_protein_product -----------------------------------------------------------------------------------------------------------------------------------------------------------MAIAADGDDDLLLLECN--ED----IGS-CASGSSS-----------PCSSSGRAWPPAAPHLLCRAI--------------------------------------------DMDRH------------------------------------------GEEQALRNLA--SREV----AHS---PGPQ-------------YRSSL-ES-QP----L--VS-AARSNAVDWMIK---------------------VR--GVYGFSPATVALSV--------------------------W-KAWMIELLSIACLSLAAKMEETFVPLLQ-DLQ---IE-GLEHLFESVTIQRMEVSVMKLLEWRLNSITAFSFVGGLLRSIELQQ-H----------LKLLAW--NRINELLLGTLAGKLPLVLFVCEISLGLWVAEIVF-LDF---------SASVVAVAATVCA--LQET-VPL----QAQ-ALKQLL-LGMLLVEEASFDKCYGVVEDVLVD--------------------------------------------PICPVSSSSQVLLLDTLRA-----CSSEGESNAS----------RKRSKPDDGGGGGGGGGGGDGDAASKKKRSSQ---------------------------------------- [355] lcl|Smo_CYCD11_3_1_unnamed_protein_product -----------------------------------------------------------------------------------------------------------------------------------------------------------MAIAADGDDDLLLLECN--ED----IGS-CASGSSS-----------PCSSSGRAWPPAAPHLLCRAI--------------------------------------------DMDRH------------------------------------------GEEQALRNLA--SREV----AHS---PGPQ-------------YRSSL-ES-QP----L--VS-AARSNAVDWMIK---------------------VR--GVYGFSPATVALSV--------------------------W-KAWMIELLSIACLSLAAKMEETFVPLLQ-DLQ---IE-GLEHLFESVTIQRMEVSVMKLLEWRLNSITAFSFVGGLLRSIELQQ-H----------LKLLAW--NRINELLLGTLAGKLPLVLFVCEIPLGLWVAEIVF-LDF---------SASVVAVAATVCA--LQET-VPL----QAQ-ALKQLL-LGMLLVEEASFDKCCGVVEDVLVD--------------------------------------------PICPVSSSSQVLLLDTLRA-----CSSEGESNAS----------RKRSKPDD--GGGGGGGGGDGDAASKKKRSSQ---------------------------------------- [353] 'gi|51091357|dbj|BAD36091.1| putative D-type cyclin [Oryza sativa (japonica cultivar-group)]' -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEQLHS--EFQ---------Q---E-EACMTQLLAVASLSLAAKMEETVVPHPL-DLQ---VC-DAKYVFETRTIKRMELAVLNALKWRMQAVTACSFIDYYLHKFNDDD-T----------PSTSAL--SRSVDLILSTCK-------------------VAEF-LVF---------RPSEIAASVALVA--LEEH--------ETS-MFERVA-TCYKNLKKERVLRCYEMIQDKIIM------RNIMRQSAG-SV--------------------------FSIPKSPIG-VLDAAA-CI-----SQQS-EDTFV---------------------G-SPATNYESSASSKRRRICR---------------------------------------- [223] 'gi|50508578|dbj|BAD30903.1| putative cyclin D1 [Oryza sativa (japonica cultivar-group)]' --------------------------------------------------------------------------------------------------------------------------------------------------------------MDMATGAKEVVVVEAYE---------YEFDLEN-----------PFTSPA------------------------------------------------------------------------------------------------------------DEPIASLL--DAEG----HHS---PSVS-------------------AA----------AS-AARREAAGFISK---------------------VRYDGELDVHPRVAYLALNYVDRYLSKRQLA---------C---ERNPWAPRLLAISCLTLAAKMQRAAAISAA-DIQ----R-GEEFMFDEAKIQRMEQMVLNALEWRTRSVTPLAFLGFFLSACFPQPRHPA--------LLDAIK--ARAVDLLLRVQP-------------------EVKM-AEF---------SPSVAAAAALLAA--AGEV-AGA-----HLLGFEAGV-AACPFVNSEKLRECGEVMAAACGVGPSWAAA-------------------------------------ATSAETPVT-VLGHHRSA------SSESERTTTV--------------------------GSAANSADAKRRCMGPPRQWGVGGPDE----------------------------- [320] 'gi|15236274|ref|NP 192236.1| CYCD6;1; cyclin-dependent protein kinase [Arabidopsis thaliana] >gi|4262155|gb|AAD14455.1| putativ' -----------------------------------------------------------------------------------------------------------------------------------------------------------MEFHLEHPLSHSSLHNN-----------------------------------------------------------------------------------------------FNDDT------------------------------------------DYETLPHSLF--LVEF----QHM---PSSH-------------YFHSL-KS-SA----F--LL-SNRNQAISSITQ---------------------YS--RKFDDPSLT-YLAVNYLDRFLSSEDMP---------Q---S-KPWILKLISLSCVSLSAKMRKPDM-SVS-DLP---VE---GEFFDAQMIERMENVILGALKWRMRSVTPFSFLAFFISLFELKEEDPLL-------LKHSLK--SQTSDLTFSLQH-------------------DISF-LEF---------KPSVIAGAALLFA--SFEL-CPL-----QFPCFSNRI-NQCTYVNKDELMECYKAIQERDIIVGEN----------------------------------------EGSTETAVN-VLDQQFS-------SCESDKSITI-----------------------------TASSSPKRRKTSTRRY------------------------------------- [302] 'gi|15241683|ref|NP 195831.1| CYCD7;1; cyclin-dependent protein kinase [Arabidopsis thaliana] >gi|7340685|emb|CAB82984.1| putati' ---------------------------------------------------------------------------------------------------------------------------------------------------------------------MDNLLCE--E-----SWP-ASPLTPE-----------PLPNFRHRSHDNDVVKMYP----------------------------------------------EIDAA------------------------------------------TMEEAIAMDL--EKELCFNNHGDK-------------------FVEFFVSK-------K--LT-DYRFHAFQWLIQ---------------------TR--SRLNLSYETVFSAANCFDRFVYMTCCD---------E---W-TNWMVELVAVTSLSIASKFNEVTTPLLE-ELE---ME-GLTHMFHVNTVAQMELIILKALEWRVNAVTSYTFSQTLVSKIGMVGDH-------------MIM--NRITNHLLDVIC-------------------DLKM-LQY---------PPSVVATAAIWIL--MEDK------------VCRESIMNLFEQNHKEKIVKCVDGMKNRDIDHQSSRRR-------------------------------------YSEGRSILSLLQRGDVMNM---NGDYNVEDLSKI------------FQIFRYEKKKRDRGNHQDNIRPAKRMTIEMSNYI------------------------------------ [341] 'gi|7270745|emb|CAB80428.1| putative protein [Arabidopsis thaliana] >gi|4468988|emb|CAB38302.1| putative protein [Arabidopsis th' --------------------------------------------------------------------------------------------------------------------------------------------------------------MGEPKDSLALFLCHESE---------SSLNEDD-----------DETIERSDKQEPHFTTT------------------------------------------------IDD----------------------------------------------EDYVADLV--LKENL--------------------------RFETL-PS-KT----T--SS-SDRLIAIDWILT---------------------VH--KNKIWVPTSNSLHCNLILRSVSPQKIH---------R---Y-ETWAMRLLSVACLSLAAKMEERIVPGLS-QYP----Q-DHDFVFKPDVIRKTELLILSTLDWKMNLITPFHYFNYFLAKISQDNHSV---------SKDLVL--LRSSDSLLALTK-------------------EISF-TEY---------RQFVVAAVTTLLA--SSSTSSDIRLTREEIANKFGSI-SWWTSNENENVYLCYQRTLEIEER--------------------------------------------KHMTPPPEI-AVSREPPAS-----GSGAKRRLSF-------------------------DDSDQSSPPAKRMRRL----------------------------------------- [321] 'gi|62733166|gb|AAX95283.1| Cyclin, N-terminal domain, putative [Oryza sativa (japonica cultivar-group)] >gi|62733295|gb|AAX9541' ----------------------------------------------------------------------------------------------------------------------------------------------------------MDDDDDTSFNNSLDLYCD--ED----PFD-STPPPPP-----------PPPEQQQQAGTTTPD--------------------------------------------------DID----------------------------------------------DEVMEYYK--AKQRCYALQIRD-------------------YCCYLQCH-------HLLLQQQQHGVAAARLKA---------------------AM--GRLGLEAATAFNAANYLDRFLSINCHL---------K---W-EEWMVEVVSVGCLSLACKLDEVTIPSLH-DLQ---MEEAMGHSFRASTIRDMELTLLKALRWRLACVTPFSFLPVTTTT-------------------------TTTRALLLRSLL-------------------DPSF-LRF---------DASLLAASALTLS--STTPQHP-----NHL--LLNRL-IHPFSQTDHEVKECFNMMKALHLDMSKNPGRSS-----------------------------------DHPCWSPISVVIP---------FHTDGTVKRSAI-------------------------SRCLFGSGRLKARSI------------------------------------------ [320] 'gi|28208266|dbj|BAC56853.1| cyclin A1 [Silene latifolia]' -MSTQAHRNRLLGT---------------ENGNGGGGVKVVNNPKL----TKKRPPLSNLTNHPRPSLVPSAITKSTKAKRDSSTGVRSTSFPAENPSATLNSKPSAVVPLKTAFTRSNVLVSCKASLPNGKGEQSHIT---RHPASCTMDTTPTPEDAQSVSMDESMSTCDSLK-----SPE-VEYMDEN-----------DVAALCSIERKTSKNLYISDDMETTGSFCKREIVSAMEI-DKVVDVDDNHMDPQFCS--------TIA----------------------------------------------CDIYKHLR--ESET----QKR---PSTD-------------FMEQTQKD-------I--NA-SMRAILVDWLVE---------------------VA--EEYRLVPDTLYLTVNYIDRYLSGNAMN---------R---Q----RLQLLGVACMMIAAKYEEICAPQVE-EF----CY-ITDNTYFKEEVLQMESGVLNFLKFEMTAPTTKNFLRRFVRAAQVMNEV----------PAFQLE--CLANYVAELSLL-------------------EYSM-LKY---------APSLIAASSVFLA--KY-M-LT-----SSRP-WNATL-RHYTLYEASDLEECVKALHQLCLN------------------------------------------------------SHISSLPAI---REKYSHHKYKSVAK----KHCPSSIPAEYFQNSSC----------------------------------------------------------- [487] 'gi|984659|emb|CAA62470.1| cyclin A [Hydra viridis] >gi|1705771|sp|P51986|CCNA CHLVR G2/mitotic-specific cyclin-A' ----------------------------------------------------------------------------LFFQKKYFLDKQLNQNAIQIYQDNLTNQNNNIGKKAKLEDEKHAHNKSITS---KYKRVPLASISNVQGSRIQPTRAAKEKLKPPQNISDSQLVNDSLK------SSNSIQAHNT-----------KNDLHKENLYNESALDTFKESPMVFSPFLSDSSCKKYSSLNGIQDIDSKLHEVFELP--------EYA----------------------------------------------QDIHNYLK--KSEA----KYR---PKSN-------------YMRK-QTD-------I--NS-SMRAILIDWLVE---------------------VS--EEYKLIPQTLYLSVSYIDRFLSHMSVL---------R---G----KLQLVGAACMLVAAKFEEIYPPEVA-EF----VY-ITDDTYTAKQVLRMEHLILKTLAFDLSVPTCRDFLSRYLFAANAKPES-------------QLK--YLAEYLSELTLI-------------------NCDISVKY---------APSMIAASSICVA--NHML--------NSIP-WTPTL-EFYSGYNIQDLRSCLNEIHLLHLA------------------------------------------------------ASTNPQQAI---QQKYKSPKFGCVSSLVPLEMPCF----------------------------------------------------------------------- [420] 'gi|425263|emb|CAA53729.1| mitotic-like cyclin [Antirrhinum majus] >gi|461726|sp|P34801|CCN2 ANTMA G2/mitotic-specific cyclin-2' M-------------------GSRHQVVQQQNRGDVVPGAIKQ--KSMAVEKKNRRALGDIGNV----VTVRGVEGKALPQVSRPITRGFCAQLIANAEA-AAAENNKNSLAVNAKGADGALPIKRAVARV-----PVQKKTVKSKPQEIIEISPDTEKKKAPVLEKEITGEKSLKK-----------------------------------KAPTLTSTLTARSKAAS-------VVRTKPKEQIVDIDAADVNNDLAVV-------EYV----------------------------------------------EDMYKFYK--SAEN----DSR---PH-D-------------YMDS-QPE-------I--NE-KMRAILIDWLVQ---------------------VH--YKFELSPETLYLTINIVDRYLASKTTS---------R---R----ELQLLGMSSMLIASKYEEIWAPEVN-DL----VC-ISDGSYSNEQVLRMEKKILGALEWYLTVPTPYVFLVRFIKASLPDSD----------------VEKNMVYFLAELGMM-------------------NYATIIMY---------CPSMIAAAAVYAA--RCTL--------NKMPIWNETL-RMHTGFSEVQLMDCAKLLIDFHGG------------------------------------------------------STDQKLQGI---YRKYSRLEKGAVALLPQPLLA------------------------------------------------------------------------- [441] 'gi|47211756|emb|CAG06237.1| unnamed protein product [Tetraodon nigroviridis]' --------------------------------------------------------------------------------------------------------------------------------------------------------------------MGEKLLCC-----------------------------------------------------------------------EVDSIRRAQQDVNLLT---------------------------------------------------------DRVLLTML--KAEE----HYL---PSPN-------------YFKCVQKE-------I--LP-KMRKIVATWMLE---------------------VC--EEQKCEEAVFPLAMNYLDRFLSVEATR---------K---T----RLQLLGAACMFLASKMKETVPLSAE-KL----CI-YTDNSVRLGELLQMELLVLSKLKWDLASVTPHDFIEHFLSKLRIFPS-----------TKHVLR--KHAQTFVALCAT-------------------DVNF-IAS---------PPSMVAAGSVVAA--VQGLDLKSLNASFSSQNLTNLL-SQVIGSDPDCLRACQEQIESLLVSSLQQAQH-------------------------------------HSSTTEPKRVSADADLSCTPTDVRDVNI---------------------------------------------------------------------------------------- [292] gi|1276895|gb|AAC47016.1|_Cyclin_D ---------------------------------------------------------------------------------------------------------------------------------------QMSSPAIIRDQSSICSSLGDAESDSHPDAQNNAVVCNMKELVYIYASVDSAAKNPEQLEPPPPPPPPPPPPPTATQSIQSYPRYISQEPPTSHCQRLDERLTTTADPPATDNVNTAIGDPTLYS---------------------------------------------------------DRCLENFL--KVEE----KHH---KIPD-------------TYFSIQKD-------I--TP-PMRKIVAEWMME---------------------VC--AEENCQEEVVLLALNYMDRFLSSKSVR---------K---T----QLQILAAACLLLASKLREPSCRALSVDLL---VV-YTDNSIYKDDLIKWELYVLSRLGWDLSSVTPLDFLELLMMRLPIGSKNFPDI------NIGKVR--GHAQAFISLAAK-------------------EHKF-AKF---------SASTIAASSIAAS--MNGL-KWHLRSGHNLHFFLSLM-TDLTSVEQAQVRDCMLHMEDIFKE--------------------------------------------HSRNLEPFLVNIDPKEMSTLYYKRRFQIHQSQHLSQISIRPLPLPKAPAECVEQHQQQHNFGSAAPHRTHTCKMQAQAQAQNEIQDVTF--------------------------- [452] 'gi|24642345|ref|NP 727913.1| Cyclin D CG9096-PC, isoform C [Drosophila melanogaster] >gi|24642343|ref|NP 727912.1| Cyclin D CG9' ----------------------------------------------------------------------------------------------------------MADIMDLLCSEIIVYESDPSLYRLNKRQQQMSSPAIIRDQSSICSSLGDAESDSHPDAQNNAVVCNMKELVYIYASVDSAAKNPEQLEPPPPPPPPPPPPPTATQSIQSYPRYISQEPPTSHCQRLDERLTTTADPPATDNVNTAIGDPTLYS---------------------------------------------------------DRCLENFL--KVEE----KHH---KIPD-------------TYFSIQKD-------I--TP-PMRKIVAEWMME---------------------VC--AEENCQEEVVLLALNYMDRFLSSKSVR---------K---T----QLQILAAACLLLASKLREPSCRALSVDLL---VV-YTDNSIYKDDLIKWELYVLSRLGWDLSSVTPLDFLELLMMRLPIGSKNFPDI------NIGKVR--GHAQAFISLAAK-------------------EHKF-AKF---------SASTIAASSIAAS--MNGL-KWHLRSGHNLHFLLSLM-TDLTSVEQAQVRDCMLHMEDIFKE--------------------------------------------HSRNLEPFLVNIDPKEMSTLYYKRRFQIHQSQHLSQISIRPLPLPKAPAECVEQHQQQHNFGSAAPHRTHTCKMQAQAQAQNEIQDVTF--------------------------- [481] 'gi|10121610|gb|AAG13285.1| cyclin D [Drosophila melanogaster]' ----------------------------------------------------------------------------------------------------------MADIMDLLCSEIIVYDSDPSLYRLNKRQQQMSSPAIIRDQSSICSSLGDAESDSHPDAQNNAVVCNMKELVYIYASVDSAAKNPEQLEPPPPPPPPPPPPPTATQSIQSYPRYISQEPPTSHCQRLDERLTTTADPPATDNVNTAIGDPTLYS---------------------------------------------------------DRCLENFL--KVEE----KHH---KIPD-------------TYFSIQKD-------I--TP-PMRKIVAEWMME---------------------VC--AEENCQEEVVLLALNYMDRFLSSKSVR---------K---T----QLQILAAACLLLASKLREPSCRALSVDLL---VV-YTDNSIYKDDLIKWELYVLSRLGWDLSSVTPLDFLELLMMRLPIGSKNFPDI------NIGKVR--GHAQAFISLAAK-------------------EHKF-AKF---------SASTIAASSIAAS--MNGL-KWHLRSGHNLHFLLSLM-TDLTSVEQAQVRDCMLHMEDIFKE--------------------------------------------HSRNLEPFLVNIDPKEMSTLYYKRRFQIHQSQHLSQISIRPLPLPKAPAECVEQHQQQHNFGSAAPHRTHTCKMQAQAQAQNEIQDVTF--------------------------- [481] 'gi|11079479|gb|AAG29191.1| mitotic cyclin a2-type, putative [Arabidopsis thaliana]' ---------------------MSSSSRNLSQENPIPRPNLAKTRTSLRDVGNRRAPLGDITNQKNGSRNPSPSSTLVNCSNKIGQSKK--------APKPALSRNWNLGILDSGLPPKPNAKSNIIVPYEDTELLQSDDSLLCSSPALSLDASPTQSDP-------SISTHDSLT-----NHV-VDYMVES-----------TTDDGND------------------------------DDDDEIVNIDSDLMDPQLCA--------SFA----------------------------------------------CDIYEHLR--VSEV----NKR---PALD-------------YMERTQSS-------I--NA-SMRSILIDWLVE---------------------VA--EEYRLSPETLYLAVNYVDRYLTGNAIN---------K---Q----NLQLLGVTCMMIAAKYEEVCVPQVE-DF----CY-ITDNTYLRNELLEMESSVLNYLKFELTTPTAKCFLRRFLRAAQGRKEV----------PSLLSE--CLACYLTELSLL-------------------DYAM-LRY---------APSLVAASAVFLA--QYTL-HP-----SRKP-WNATL-EHYTSYRAKHMEACVKNLLQLCNE------------------------------------------------------KLSSDVVAI---RKNTSLQQRSFVPRHYRKSFSSDSVSGYVFFTLVYCTYC------------------------------------------------------- [454] 'gi|22330698|ref|NP 177863.2| CYCA1;2; cyclin-dependent protein kinase regulator [Arabidopsis thaliana]' ---------------------MSSSSRNLSQENPIPRPNLAKTRTSLRDVGNRRAPLGDITNQKNGSRNPSPSSTLVNCSNKIGQSKK--------APKPALSRNWNLGILDSGLPPKPNAKSNIIVPYEDTELLQSDDSLLCSSPALSLDASPTQSDP-------SISTHDSLT-----NHV-VDYMVES-----------TTDDGND------------------------------DDDDEIVNIDSDLMDPQLCA--------SFA----------------------------------------------CDIYEHLR--VSEV----NKR---PALD-------------YMERTQSS-------I--NA-SMRSILIDWLVE---------------------VA--EEYRLSPETLYLAVNYVDRYLTGNAIN---------K---Q----NLQLLGVTCMMIAAKYEEVCVPQVE-DF----CY-ITDNTYLRNELLEMESSVLNYLKFELTTPTAKCFLRRFLRAAQGRKEV----------PSLLSE--CLACYLTELSLL-------------------DYAM-LRY---------APSLVAASAVFLA--QYTL-HP-----SRKP-WNATL-EHYTSYRAKHMEACVKNLLQLCNE------------------------------------------------------KLSSDVVAI---RKKYSQHKYKFAAK----KLCPTSLPQELFL--------------------------------------------------------------- [442] 'gi|89272765|emb|CAJ83542.1| cyclin A2 [Xenopus tropicalis]' -----------------------------------------------------------------MADHLLRDENQENVQPRKPLAPVGGRTVLGVLQENHRGRQTLKASKPALQQAQALSVNHLGVNDENYGKVPAGKAASKQPTFTIHVDEPDCTNNRRKPVHKKTVQDENLR------------------------------------QLNSVLGSIGTRKPLEPIHIAMETSFGSPMDVSLVDEEQKVVGCSNVP--------DYA----------------------------------------------KEIHTYLR--EMEV----KCK---PKSG-------------YMQK-QPD-------I--TG-NMRAILVDWLVE---------------------VG--EEYKLQNETLYLAVNYIDRFLSSMSVL---------R---G----KLQLVGTAAMLLASKFEEIYPPEVA-EF----VY-ITDDTYTKKQVLKMEHLVLKVLSFDLAAPTILQYLNQYFQIQPVSPKVE-----------------SLSMFLGELSLV-------------------DADPFLRY---------LPSVVAAAALVIA--NYTV--------NER-TWSDSL-VQYTGYALETLKPCILDLYQTYLS------------------------------------------------------AASHQQQAV---REKYKTQKNHCVSLIDPPESLSIFL--------------------------------------------------------------------- [415] 'gi|18682|emb|CAA44632.1| mitotic cyclin [Glycine max] >gi|116157|sp|P25011|CCNB1 SOYBN G2/mitotic-specific cyclin S13-6 (B-like' M--------------------ASRIVQQQQARGEAVVGGGKQQKKNGVADGRNRKALGDIGNL----ANVRGV---VDAKPNRPITRSFGAQLLANAQAAAAADNSKRQACANVAGPPAVANEGVAVAKRAAPKPVSKKVIVKPKPSEKVTDIDASPDKKEVLKDKKKEGDANPKK----------------------------------KSQHTLTSVLTARSKAAC-------GITNKPKEQIIDIDASDVDNELAAV-------EYI----------------------------------------------DDIYKFYK--LVEN----ESR---PH-D-------------YIGS-QPE-------I--NE-RMRAILVDWLID---------------------VH--TKFELSLETLYLTINIIDRFLAVKTVP---------R---R----ELQLVGISAMLMASKYEEIWPPEVN-DF----VC-LSDRAYTHEHILTMEKTILNKLEWTLTVPTPLVFLVRFIKASVPDQE----------------LD-NMAHFLSELGMM-------------------NYAT-LMY---------CPSMVAASAVLAA--RCTL--------NKAPFWNETL-KLHTGYSQEQLMDCARLLVGFYST------------------------------------------------------LENGKLRVV---YRKYSDPQKGAVAVLPPAKFLLPEGSASQHS--------------------------------------------------------------- [454] 'gi|1064927|emb|CAA63542.1| cyclin A-like protein [Nicotiana tabacum]' -MATTQNRRSSVSSATAKRQAMTANSSLENNNHG----------KLV---AKKRPALTNISNH----TTASARNSLSHSSKLAPCTSKAVSIKKSNSNAA-----SSVLPT-SSFVKP---ISKTVSIPRSDAAIPKITAI-PLPATCSMDISPSHSDGSLVSMDETMSTSDSLR-----SPD-VEYIDDN-----------QTAAFDSIEKKAFSTLYISEDVK-AADICKRDVLVDIESGDKIANIDNNFVDPQLCA--------TMA----------------------------------------------CDIYKHLR--ATEV----KKR---PSTD-------------FMEKVQKD-------I--NA-SMRAILIDWLVE---------------------VA--EEYRLVPDTLYLTVNYIDRYLSGNLMD---------R---Q----RLQLLGVACMMIASKYEEICAPQVE-EF----CY-ITDNTYFKEEVLQMESTVLNYLKFEMTAPTAKCFLRRFVRAAQGLNEV----------LSLQLE--HLASYIAELSLL-------------------EYNM-LCY---------APSVIAASAIFLA--KYIL-LP-----SKKP-WNSTL-RHYTLYQPSDLRDCVVALHSLCCN------------------------------------------------------NNNSSLPAI---REKYSQHKYKFVAK----KYCPPTIPVEFFQNISC----------------------------------------------------------- [483] 'gi|1064929|emb|CAA63543.1| cyclin A-like protein [Nicotiana tabacum]' -MATTQNRRNSVSSAVAKRQAMA------ENNHG----------KLPAGGAKKRPALTNISNH----TTASARNSLSHSSKLAPCTSKVVSIKKNNSNAA-----SSVLPTSSSFVKP---ISKTVSLPRSDAAVPKITAIPPLPSTCSMDISPSHSDGSLVSMDETMSTSNSLR-----SPD-VEYIDDN-----------QTAAFDSIEKKAFSTLYISEDVK-AADICKRDVLVDMESGDKIANIDNNLVDPQLCA--------TMA----------------------------------------------CDIYKHLR--ATEV----KKR---PSTD-------------FMEKVQKD-------I--NA-SMRAILIDWLVE---------------------VA--EEYRLVPDTLYLTVNYIDRYLSGNLMD---------R---Q----RLQLLGVACMMIASKYEEICAPQVE-EF----CY-ITDNTYFKEEVLQMESTVLNYLKFEMTAPTAKCFLRRFVRAAQGLNEV----------LSLQLE--HLASYIAELSLL-------------------EYNM-LCY---------APSVIAASAIFLA--KYIL-LP-----SKKP-WNSTL-RHYTLYQPSDLRDCVMALHSLCCN------------------------------------------------------NNNSSLPAI---REKYSQHKYKFVAK----KYCPPTIPVEFFQNISC----------------------------------------------------------- [482] 'gi|849070|dbj|BAA09366.1| A-type cyclin [Nicotiana tabacum]' -MATTQNRRSSVSSATTKRQAMTSNSSLENNNHG----------KLV---AKKRPALTNISNH----TTASARNSLSHSSKLAPCTSKAVSIKKSNSNAA-----SSVLPT-SSFVKP---ISKTVSIPRSDAAIPKITAI-PLPATCSMDISPSHSDGSLVSMDETMSTSDSLR-----SPD-VEYIDDN-----------QTAAFDSIEKKAFSTLYISEDVK-AADICKRDVLVDIESGDKIANIDNNFVDPQLCA--------TMA----------------------------------------------CDIYKHLR--ATEV----KKR---PSTD-------------FMEKVQKD-------I--NA-SMRAILIDWLVE---------------------VA--EEYRLVPDTLYLTVNYIDRYLSGNLMD---------R---Q----RLQLLGVACMMIASKYEEICAPQVE-EF----CY-ITDNTYFKEEVLQMESTVLNYLKFEMTAPTAKCFLRRFVRAAQGLNEV----------LSLQLE--HLASYIAELSLL-------------------EYNM-LCY---------APSVIAASAIFLA--KYIL-LP-----SKKP-WNSTL-RHYTLYQPSDLRDCVVALHSLCCN------------------------------------------------------NNNSSLPAI---REKYSQHKYKFVAK----KYCPPTIPVEFFQNISC----------------------------------------------------------- [483] 'gi|49523176|gb|AAH75562.1| Cyclin A1 [Xenopus tropicalis] >gi|55741972|ref|NP 001006768.1| cyclin A1 [Xenopus tropicalis]' -----------------------------------------------------------------MADHLLRDENQENVQPRKPLAPVGGRTVLGVLQENHRGRQTLKASKPALQQAQALSVNHLGVNDENYGKVPAGKAASKQPTFTIHVDEPDCTNNRRKPVHKKTVQDENLR------------------------------------QLNSVLGSIGTRKPLEPIHIAMETSFGSPMDVSLVDEEQKVVGCSNVP--------DYA----------------------------------------------KEIHTYLR--EMEV----KCK---PKSG-------------YMQK-QPD-------I--TG-NMRAILVDWLVE---------------------VG--EEYKLQNETLYLAVNYIDRFLSSMSVL---------R---G----KLQLVGTAAMLLASKFEEIYPPEVA-EF----VY-ITDDTYTKKQVLKMEHLVLKVLSFDLAAPTILQYLNQYFQIQPVSPKVE-----------------SLSMFLGELSLV-------------------DADPFLRY---------LPSVVAAAAFVIA--NYTV--------NER-TWSDSL-VQYTGYALETLKPCILDLYQTYLS------------------------------------------------------AASHQQQAV---REKYKTQKNHCVSLIDPPESLSIFL--------------------------------------------------------------------- [415] ; END; BEGIN CODONS; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE=unord PolyTcount=MINSTEPS ; EXSET * UNTITLED = 1-493 495-497 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