#NEXUS [MacClade 4.08 registered to M. Hasebe, NIBB] BEGIN DATA; DIMENSIONS NTAX=18 NCHAR=798; FORMAT DATATYPE=PROTEIN SYMBOLS = " 1 2 3 4" MISSING=? GAP=- ; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] 'gi|42569246|ref|NP 179849.2| BRK1 [Arabidopsis thaliana] >gi|23197618|gb|AAN15336.1| Unknown protein [Arabidopsis thaliana] >gi' ----MAKAG--GITNAVNVGIAVQADWE---------------NREFISHISLNVRRLFEFLVQFEST-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKSKLAS----------------------------------------LNEKLD-------------------------------------------------------------------LLERRLEMLEVQVSTATANPSLFAT-------------------------- [85] 'gi|20338425|gb|AAM18794.1| BRICK1 [Zea mays] >gi|75158652|sp|Q8RW98|BRK1 MAIZE Protein BRICK1' ----MGRGG--GMGNPVNVGIAVQADWE---------------NREFISNISLNVRRLFDFLLRFEAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKSKLAS----------------------------------------LNEKLD-------------------------------------------------------------------ILERKLEVLEVQVGSATTNPSVFN--------------------------- [84] 'gi|50916134|ref|XP 468531.1| putative BRICK1 [Oryza sativa (japonica cultivar-group)] >gi|29371416|gb|AAO72702.1| unknown [Oryz' ----MARAGGHGMGNPVNVGIAVQADWE---------------NREFISNISLNVRRLFDFLLRFEAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKSKLAS----------------------------------------LNEKLD-------------------------------------------------------------------ILERKLEVLEVQVSSATTNPSVFN--------------------------- [86] lcl|Ppa_BRK1_1_1_unnamed_protein_product ----MAKN---GINNSVAVGIAVQSDWD---------------NRHFSSSLSLNVRRLFEFLLQFESS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TRSKLAT----------------------------------------LNEKLT-------------------------------------------------------------------VLERQLEFLEAQFSTAINPV------------------------------- [79] lcl|Smo_BRK1_1_1_unnamed_protein_product ----M-RGGGAGGGGSANLGAAVQADWE---------------NRQFTGALALNVRKLFEFVLQFEST-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TRNKIAI----------------------------------------LNDKLT-------------------------------------------------------------------ALERKLEFLEAQHSSVTAPGSS----------------------------- [83] lcl|Smo_BRK1_2_2_unnamed_protein_product ----M-RGGGAGGGGSANLGAAVQADWE---------------NRQFTGALALNVRKLFEFVLQFEST-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TRNKIAI----------------------------------------LNDKLT-------------------------------------------------------------------ALERKLEFLEAQHSSVTAPGSS----------------------------- [83] 'gi|66815625|ref|XP 641829.1| component of SCAR regulatory complex [Dictyostelium discoideum] >gi|60469870|gb|EAL67856.1| compon' ----M------------STKTNIQKDWE---------------QREFIEDMSINIQKIVEFLNKFELS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TRNKLSD----------------------------------------LNEKLT-------------------------------------------------------------------ILDRQVDYLEATFKTVQE--------------------------------- [68] 'gi|67083853|gb|AAY66861.1| unknown [Ixodes scapularis]' ----M------SVSEREAIQKQIQQDWA---------------NREYIEIISGSIKKIADFLTSFDMS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CRARLAT----------------------------------------LNEKLT-------------------------------------------------------------------SLERRIEYLEARVTKGETLS------------------------------- [76] 'gi|24762504|ref|NP 726400.1| Syntaxin Interacting Protein 1 CG30173-PA [Drosophila melanogaster] >gi|21626707|gb|AAM68291.1| CG' ----M------SGAHREAIQKQIHQDWA---------------NREYIEVITASIKRITDFLNSFDMS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CRSRLAV----------------------------------------LNEKLT-------------------------------------------------------------------ILERRIDYLEACVAQGETLT------------------------------- [76] 'gi|55245298|gb|EAA04587.2| ENSANGP00000010962 [Anopheles gambiae str. PEST] >gi|58378117|ref|XP 308258.2| ENSANGP00000010962 [A' ----M------D-AHREAIQKQIHQDWA---------------NREYIEVITASIKRITDFLNSFDMS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CRSRLAV----------------------------------------LNEKLT-------------------------------------------------------------------TLERRIDYLEACVTKGETLQ------------------------------- [75] 'gi|74151533|dbj|BAE38874.1| unnamed protein product [Mus musculus]' ----M------A-GQEDPVQREIHQDWA---------------NREYIEIITSSIKKISDFLNSFDMS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CRSRLAT----------------------------------------LNEKLT-------------------------------------------------------------------ALERRIEYIEARVTKDETLT------------------------------- [75] 'gi|73984698|ref|XP 850451.1| PREDICTED: similar to chromosome 3 open reading frame 10 isoform 1 [Canis familiaris]' ----M------A-GQEDPVQREIHQDWA---------------NREYIEVITSSIKKIADFLNSFDMS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CRSRLAT----------------------------------------LNEKLT-------------------------------------------------------------------ALERRIEYIEARVTVRPS-PRTMPCCCWEVALWNTGRRGKGPSSLSSFLSS [105] 'gi|62858269|ref|NP 001015994.1| hypothetical protein LOC548748 [Xenopus tropicalis]' ----M------A-SQEDPVQREIHQDWA---------------NREYIEVITSSIKKIADFLNSFDMS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CRSRLAT----------------------------------------LNEKLT-------------------------------------------------------------------ALERRIEYIEARVTKGETLT------------------------------- [75] 'gi|17939500|gb|AAH19303.1| Chromosome 3 open reading frame 10 [Homo sapiens] >gi|46255710|gb|AAH01067.1| Chromosome 3 open read' ----M------A-GQEDPVQREIHQDWA---------------NREYIEIITSSIKKIADFLNSFDMS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CRSRLAT----------------------------------------LNEKLT-------------------------------------------------------------------ALERRIEYIEARVTKGETLT------------------------------- [75] 'gi|76648501|ref|XP 591430.2| PREDICTED: similar to chromosome 3 open reading frame 10 [Bos taurus] >gi|50344848|ref|NP 00100209' ----M------A-GQEDPVQREIHQDWA---------------NREYIEVITSSIKKIADFLNSFDMS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CRSRLAT----------------------------------------LNEKLT-------------------------------------------------------------------ALERRIEYIEARVTKGETLT------------------------------- [75] 'gi|6841250|gb|AAF28978.1| HSPC300 [Homo sapiens]' MGAAM------A-GQEDPVQREIHQDWA---------------NREYIEIITSSIKKIADFLNSFDMS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CRSRLAT----------------------------------------LNEKLT-------------------------------------------------------------------ALERRIEYIEARVTKGETLTRTVPCCCWEVALHNTGHMGKAPAAFSSFLSP [110] 'gi|14714859|gb|AAH10582.1| RIKEN cDNA 6720456B07 [Mus musculus] >gi|19527154|ref|NP 598698.1| hypothetical protein LOC101314 [M' ----M------A-GQEDPVQREIHQDWA---------------NREYIEIITSSIKKISDFLNSFDMS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CRSRLAT----------------------------------------LNEKLT-------------------------------------------------------------------ALERRIEYIEARVTKGETLT------------------------------- [75] 'gi|38512132|gb|AAH61677.1| MGC68812 protein [Xenopus laevis]' ----M------A-SQDDPVQREIHQDWA---------------NREYIEVITSSIKKIADFLNSFDMS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CRSRLAT----------------------------------------LNEKLT-------------------------------------------------------------------ALERRIEYIEARVTKGETLT------------------------------- [75] ; END; BEGIN CODONS; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE=unord PolyTcount=MINSTEPS ; EXSET * UNTITLED = 1-4 6-22 29-43 69-627 635-674 681-747 766-798; 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