#NEXUS [MacClade 4.08 registered to oguri yasuko, ERATO hasebePJ] BEGIN DATA; DIMENSIONS NTAX=28 NCHAR=4854; FORMAT DATATYPE=PROTEIN SYMBOLS = " 1 2 3 4" MISSING=? GAP=- ; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 1510 1520 1530 1540 1550 1560 1570 1580 1590 1600 1610 1620 1630 1640 1650 1660 1670 1680 1690 1700 1710 1720 1730 1740 1750 1760 1770 1780 1790 1800 1810 1820 1830 1840 1850 1860 1870 1880 1890 1900 1910 1920 1930 1940 1950 1960 1970 1980 1990 2000 2010 2020 2030 2040 2050 2060 2070 2080 2090 2100 2110 2120 2130 2140 2150 2160 2170 2180 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4190 4200 4210 4220 4230 4240 4250 4260 4270 4280 4290 4300 4310 4320 4330 4340 4350 4360 4370 4380 4390 4400 4410 4420 4430 4440 4450 4460 4470 4480 4490 4500 4510 4520 4530 4540 4550 4560 4570 4580 4590 4600 4610 4620 4630 4640 4650 4660 4670 4680 4690 4700 4710 4720 4730 4740 4750 4760 4770 4780 4790 4800 4810 4820 4830 4840 4850 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] 'gi|22328039|ref|NP 201200.2| ATP binding / ATP-dependent helicase/ DNA binding / helicase/ nucleic acid binding [Arabidopsis th' M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AENTASHRRKPRSLNDRH---------------YSILQDLSAPPRQPPSSSHGED-----------------------------------------------------------------------------------------------------------------EETKKSMIKLAGRRRLCKALPKEDEADGYDDPDLVDFYSPVKGETSLDSAGIGNKFTSWDESKEANTELAGEPNFSIITDFCSPSPQLKQKEE------------------------------------------------MQGDGGRNEIMGILDD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTSKLGTMSIQKKKDSQSNDFDACGVKSQVDKFDFEDAKSSFSLLSDLSKSS-------------PDVVTTYNAGVNSIKDKQGKSGF-----------------AIREEQTSKEFSREWEERISNV-------------------GKQNSYSGRHFDDNSEDNRQGYNLDRGKSQCKEVDQSMKTTRHIEVSEKIRTVGRSNAAKLRDLDEDD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDDDCLILSGKKA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AEMKINKPARSYNAKRHGYDERSLEDEGSITLTGLNLSYT----LPGKIATMLYPHQREGLNWLWS-----LHTQ-GK--GGILGDDMGLGKTMQICSFLAGLFHSKLIKR-----------------------------------ALVVAPKTLLPHWMKELATVG---LSQMTREYYGTS--------------------------------------------------TKAREYDLHHIL------------------QGKGILLTTYDIVRNNTKALQGD----DHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAKSLLE-IPSSHRIIISGTPIQNNLK-------------------ELWALFNFSCP-GLLGDKN-------------------------------------WFKQNYEHYILRGTDKNATDREQRIGSTVAKNLREHIQPFFL------RRLKSEVFGDDGA--------------------------------------------TSKL--SKKDEIVVWLRLTACQ--------------------------------RQLYEAFLNSE----IVLS--------------AFDGS--------------------------------------------------------------PLAALTILKKICDHPLLLTKRAAEDVL---EGMDSTLTQEEAGVAERLAM----------------------------HIADNVDTD---------------------------DFQTKNDSISCKLSFIMSLL------------------------------ENL--------------------------------------IPEGHRVLIFSQTRKMLNLIQDSL--TSN------------GYSFLRIDGT-TKAPDRLKTVEEFQEGH-VAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSATVEEKIYRKQVYKGGLFKTAT-E------------------HKEQIR--------------YF-SQQD-----------LRELFSLPKGGFD--------------------------VSPTQQQL-----------------------------------------------------------------------------YEE---HYN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QIKLDEKLESHV-KFLETLG---IA------------------GVSHH------------------------SLLFSKTAP------IQAIQKDEEEQIRRET-----------ALLLGRASASISQDTVINGADYAFKPKDVNLDK---RINISPVDDKELSESVIKARLNRLTMLLQNKGTVSRLPDGGAKIQKQIAELTRELKDMKAA----ERINMPQVIDLEEDISRKMQKGLNL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [1090] 'gi|8777308|dbj|BAA96898.1| unnamed protein product [Arabidopsis thaliana]' M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AENTASHRRKPRSLNDRH---------------YSILQDLSAPPRQPPSSSHGED-----------------------------------------------------------------------------------------------------------------EETKKSMIKLAGRRRLCKALPKEDEADGYDDPDLVDFYSPVKGETSLDSAGIGNKFTSWDESKEANTELAGEPNFSIITDFCSPSPQLKQKEE------------------------------------------------MQGDGGRNEIMGILDD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTSKLGTMSIQKKKDSQSNDFDACGVKSQVDKFDFEDAKSSFSLLSDLSKSS-------------PDVVTTYNAGVNSIKDKQGKSGF-----------------AIREEQTSKEFSREWEERISNV-------------------GKQNSYSGRHFDDNSEDNRQGYNLDRGKSQCKEVDQSMKTTRHIEVSEKIRTVGRSNAAKLRDLDEDD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDDDCLILSGKKA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AEMKINKPARSYNAKRHGYDERSLEDEGSITLTGLNLSYT----LPGKIATMLYPHQREGLNWLWS-----LHTQ-GK--GGILGDDMGLGKTMQICSFLAGLFHSKLIKR-----------------------------------ALVVAPKTLLPHWMKELATVG---LSQMTREYYGTS--------------------------------------------------TKAREYDLHHIL------------------QGKGILLTTYDIVRNNTKALQGD----DHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAKSLLE-IPSSHRIIISGTPIQNNLK-------------------AL--------------SFN-------------------------------------RFKQNYEHYILRGTDKNATDREQRIGSTVAKNLREHIQPFFL------RRLKSEVFGDDGA--------------------------------------------TSKL--SKKDEIVVWLRLTACQ--------------------------------RQLYEAFLNSE----IVLS--------------AFDGS--------------------------------------------------------------PLAALTILKKICDHPLLLTKRAAEDVL---EGMDSTLTQEEAGVAERLAM----------------------------HIADNVDTD---------------------------DFQTKNDSISCKLSFIMSLL--------------------------------------------------------------------------------------------DSL--TSN------------GYSFLRIDGT-TKAPDRLKTVEEFQEGH-VAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSATVEEKIYRKQVYKGGLFKTAT-E------------------HKEQIR--------------YF-SQQD-----------LRELFSLPKGGFD--------------------------VSPTQQQL-----------------------------------------------------------------------------YEE---HYN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QIKLDEKLESHV-KFLETLG---IA------------------GVSHH------------------------SLLFSKTAP------IQAIQKDEEEQIRRET-----------ALLLGRASASISQDTVINGADYAFKPKDVNLDK---RINISPVDDKELSESVIKARLNRLTMLLQNKGTVSRLPDGGAKIQKQIAELTRELKDMKAA----ERINMPQVIDLEEDISRKMQKGLNL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [1053] 'gi|50929915|ref|XP 474485.1| OSJNBb0020J19.17 [Oryza sativa (japonica cultivar-group)] >gi|38567839|emb|CAE05788.2| OSJNBb0020J' M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASPPPFDICGDLDDDPTPPAPTPLAAPTPNGLNDRL---------------LRLTRTHQRGPSQNPNPNPNPN--------------------------------------------------------------------------------------------------------PKPPPPPPPQEPEPAKVKLAGRRRLCKLSTAGDESAGDDDS----------------------------------------------------------------------------------------------------------------------IRDILDD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTTRLDSLSVDRPTARPRPHVSP------LPCALHADPDPSQSQLNDGTKPS---------------------------------SSFVDCDDDDDDAGGAYGGFGVKEEVTRKVF------------------------------KASSSFGGRGNDDKMKAKG----------------------AYAFDTVSRKTTTESKASKFFGDYDDE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDIDQDAENGKEN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HADDVGWEKTEDFKMEPTGTGVTRKPYN----LPGRIFNMLYPHQREGLRWLWV-----LHCR-GT--GGILGDDMGLGKTMQVSAFLAGLFHSRLIKR-----------------------------------VLVVAPKTLLTHWTKELSVVS---LKDKIRDYSGPN--------------------------------------------------ANARNYELKYAF------------------KEGGILLTTYDIVRNNFKMIKGNF-----TNDFDDEEETLWNYVILDEGHIIKNPKTQRAQSLFE-IPCAHRIVISGTPIQNNLK------------------------------------------------------------------------------------------------------VQSKELRERIKPYFL------RRMKNEVFLDSGT------------------------------------------GEDKKL--AKKNELIIWLKLTSCQ--------------------------------RQLYEAFLNSE----LVHS--------------SMQGS--------------------------------------------------------------PLAAITILKKICDHPLLLTKKAAEGVL---EGMDAMLNNQEMGMVEKMAM----------------------------NLADMAHDDDD-------------------------VELQVGQDVSCKLSFMMSLL------------------------------QNL--------------------------------------VSEGHNVLIFSQTRKMLNIIQEAI--ILE------------GYKFLRIDGT-TKISERERIVKDFQEGP-GAPIFLLTTQVGGLGLTLTKAARVIVVDPAWNPSTDNQSVDRAYRIGQMKDVIVYRLMTSGTIEEKIYKLQVFKGALFRTAT-E------------------HKEQTR--------------YF-SKRD-----------IQELFSLPEQGFD--------------------------VSLTQKQL-----------------------------------------------------------------------------QEE---HGQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLVMDDSLRKHI-QFLEQQG---IA------------------GVSHH------------------------SLLFSKTAI------LPTLNDNDGLDSSRRA-----------MPMAKHYYKGASSDYVANGAAYAMKPKEFIART------YSPNSTSTESPEEIKAKINRLSQTLANTVLVAKLPDRGDKIRRQINELDEKLTVIESSPEPLERKGPTEARTLKDWESLKAKEEEAGGRARGEGRKGSELNSTPFRLNSTSSTLVVFKVPSTFTTGRGALAAAAANGRFVPMAPTSQPQPQQEVEVEVDEDEELVNMVVEAGVGAIKMKMKIPRRVLGSLYPHQRDGLAWLWALHCTATGGILADDMGLGKTIQEGGILLTSYHIVRNNYMLLRGNGNGNNVDNNEEEPLWDYVILDEGHIVKNTKTQRAQSLFQIPSAHRIVLTGTPIQNKLKRRLYEAFLNKDPVRSQTGALKGSSLEASTILRKICDHPLLLTKRDTDDFLEEMGAMLNNRDMCMVERILEDNLYADKRLQIVQGASCKIAFILPLLRNLVEEGHYVLIFSQTRVMLNLIQDAVSIEGHKFLRIDGTTKISERKKILKDFQEGLDSPILLLTSHVGGLGNTLTKADRVIVVDPAWNPSIDNQSVDRAYRIGQTKDVIVYRLVTCGTIEEKIYKQQIFKGGLFRTATECKEQPQFYNQDLYLQNEQEYSSLPPHGFDASLTQHKMQVENGQQLVMDESLKKHIQFLEQQGIAGVNRHGVLFCKTETTATLGDDGAINRKVRDIMVRRCYAPWEHICRDVEKKSLIDQVKEMSKKMDGLGDTMGRIVALEEEYAAELIGMLHENRWERSHLEKIRMQIDDLHEEHMAKFDEMLERIKRMELADEGELIAKFGEMVERMRQRCDMDRLSLPLLSSTLVA [1634] lcl|Smo_CHR24_13_1_unnamed_protein_product ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------?STASEEPVR--PQQSQA-------------------------------------------------------------------------------------------------------------NST-----KVPGRRRLCKVKERD---------------SPLPMASELAAAQL--------------VELPSDSNDS---------------NS------------------------------------------------LETDDGVDYL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LCEKLGSMSLTMKQQISTTSRDT------FESANSADYGSATSSLAEVSKGA-------------TDDVLEISS--SSLSKK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNKSALDLVLGEGRWKFV----LPGNVSSILYEHQHEGLRWLWR-----LHLQ-RR--GGILGDDMGLGKTMQIAAFLCGLFHSKLIKR-----------------------------------ALIVAPKTLIPHWGKELNVVG---LGRKVKDYSGTS--------------------------------------------------ISVRESNLDRIL------------------QVGGVLLTTYDIVRHNTNALKGEYN----F----DDDDVTWDYVILDEGHLIKNPSTQRAKSLKE-IPSAHRIIISGTPIQNNLR-------------------EMWALFDFCYP-ELLGDRKECVLNV------------------PSLVLMLNFVRC-RFKAKYETMILSGNDKNATDRQKRIGAAVAQELQDRFAPYFL------RRLKKDVFP-NTG------------------------------------------EETQQL--AKKNDIIVWLRLSQRQ--------------------------------RQMYTAFLRSE----TAQG--------------SLAGSAKGSALAALTVFEILFKLFL--------------------------------V---------LMSELQILKKICDHPLLLTKRATDDVVEGLEYLDSTDIAAAEAMRKSL-A----------------------------GLAE----P---------------------------EPDSDGNKHSCKIVFLMALLVSWCRKVTTYICVFLL------------K-ENL--------------------------------------VQEGHRTLVFAQTLKMLDIIQEEI--TKR------------RYSFCRIDGK-TKGSERQRIVEDFQTDGCTVSIFLLTSQVGGLGLTLTAADRVVIVDPAWNPSKDNQSVDRAYRIGQLRDVIVYRLMTSGTLEEKIYRKQVFKGGLMKVAT-E------------------RAEQFR--------------YF-SQQD-----------FRELLTVPKTGFD--------------------------ISPTQQQL-----------------------------------------------------------------------------YEE---HAS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QFEVDEELAKHI-KFLERQG---IA------------------GVSHH------------------------DLLFSKAAP------ELPPAADEEVSATASV-----------SRMAGSLSSKLKNKQVEDYSGSAAYQPQSNYWKGTQRVNLVDLDDSQMNVRHLQDNINRLSSMLSNR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [871] lcl|Smo_CHR24_39_1_unnamed_protein_product M---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KMRVLSVGLKFALIVERKPNFLCHLVSTARKESTRTKQSDTSVLH---------------ESL--TSSVSTASEEPVR--SQHSEA-------------------------------------------------------------------------------------------------------------NNT-----KVPGRRRLCKVKERH---------------SPLPMASELAAAQL--------------VELPSDSNDS---------------HS------------------------------------------------LETDDGVDYL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LCEKLGSMSLTMKQQISTTSRDT------FESANSADYGSATSSLAEVSKGG-------------TDDVLEISS--SSLSKK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNKSALDLVLGEGRWKFI----LPGNVSSILYEHQHEGLRWLWR-----LHLQ-RR--GGILGDDMGLGKTMQIAAFLCGLFHSKLIKR-----------------------------------ALIVAPKTLIPHWGKELNVVG---LGRKVKDYSGTS--------------------------------------------------ISVRESNLDRIL------------------QAGGVLLTTYDIVRHNTNALKGEYN----F----DDDDVTWDYVILDEGHLIKNPSTQRAKSLKE-IPSAHRIIISGTPIQNNLR-------------------EMWALFDFCYP-ELLGDRKECVLNV------------------PSLVLMLNFVRC-RFKAKYETMILSGNDKNATDRQKRIGAAVAQELQDRFAPYFL------RRLKKTFF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------R--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [468] lcl|Smo_CHR24_17_1_unnamed_protein_product M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CWENDARLFDDWDE----------------------------------------------------------------------------------------------------------------------------GASSVCTARD-D---------------SPLRMASELGPAQL--------------VELPSVSN--------------------------------------------------------------------ERFDGVGYL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LCEKLGSVSLTMKQQV---SRDT------F-AANTAGYGS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNKSASDLVLGEGRWKFI----LPGNVASVLYEHQHEGLRWLWR-----LHLQ-RR--GGILGDDMGLGKTMQ------------LIKR-----------------------------------ALIVVPKTLIPNWSKELNVVR---LGRKVEDYSTLS--------------------------------------------------VNVRKSNLHHIL------------------QAGGVLLTTYDIVPHNTNALKGR------F----DGDQVTWDYVILDEGHLIKDPSTQRAESLKE-IPSAHRIILSGTPIQNNLRVRLIRKSSDKFFRLNTSFQEMWALFHFCYP-ELLGDRKE-------------------------------------FKWEYEAAILSGNNKDANYIQK--------SCADKIALYFL------RRLKKDVFP-SMG------------------------------------------QGTQQL--AKKNDIIVWLRLSQRQ--------------------------------RQMYMALLRSE----TAHE--------------FLAGS---DVLLALTVFEILFKMFL--------------------------------M---------SMSELQILKRICDHPWLLIKQEIDDVI--------------VPTLRPLPP----------------------------GSAE----S---------------------------EPDSDGNKHSCKVVFLMALL------------------------------ENL--------------------------------------VQEGHRTLVFAQALKMLDIIQEEI--TKR--------------SFCRIDGK-TKVSERQRIVEDFQSDGCRVSIFLLTSQVGGLGLTLTVADRVVIVDPVWNPSKDNQSVDRAYRIGQRRDIIVYRLITSGTMEEKVYRRQVFKGGLMKIAT-E------------------RAEQFR----NCIIGPITHIFL-RSQD-----------FRELLTVPKTGFD--------------------------ISPTQQQL-----------------------------------------------------------------------------YEE---HAS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QFEVDEELAKHI-KFLERQG---IA------------------GVSHH------------------------DLLFSKAAP------ELRPDADEEVSAIASF----------YSRQASLFWFRILAKVFPVSYSYAAHKARKNCWKGTREVNEINK-----------------------F--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [759] lcl|Smo_CHR24_23_1_unnamed_protein_product M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ISINAAPTVR--GE----------------------------------------------------------------------------------------------------------------------------TASSVCTARD-D---------------SPLRMASELGPAQL--------------VELPSVSN--------------------------------------------------------------------ERFDGVGYL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LCDKLGSMSLTMKQQV---SRDT------F-AANTVGYES----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDTSASDLVLGEGRWKFI----LPGNVSSIFYEHQHEGLRWLWR-----LHLQ-RR--GGILGDDMGLGKTMQ------------LMKR-----------------------------------ALIVVPKTLIPHWSKELNVVG---LGRKVKDYSTSS--------------------------------------------------VNVRKSNLDHILHVYSLSYLHPCISVLPLQQAGGVLFTTYDIVRHNTNALKGK------F----DGDQVTWDYVILDEGHLIKDPSTQRAKSLKE-IPSAHRIILSGTPIQNNLR-------------------EMWALFHFCYP-ELLGDRKECVFNV------------------LSLALTLNFVSYRRFKWEYEAAILSGNNKDANYIQKGNGATVAQKLQDRIAQYFL------RRLKKDVFP-SMG------------------------------------------QGTQQL--AKKNDIIVWLRLTQRQ--------------------------------RQMSMALLRSE----TAHE--------------FLAGS---DILLALTVFEILFKMFL--------------------------------M---------RMSELQILKRICDHPSLLTKQEIDDVV---GYLDSTGTAAAEAMGKSLPA----------------------------GSAE----S---------------------------EPDSEGNKHSCKVVFLMALL------------------------------ENL--------------------------------------VQEGHRTLVFAQALKMLDIIQ------------------------------------------DFQSDGCRVSIFLLTSQVGGFGLTI------------------------AYRIGQRRDIIVYRLITSGRMEEQVYRRQVFKGGLMKIAT-E------------------RAEQFRVLFPAGIVSLDRSLTL-FCQD-----------FRELLTVPKTGFD--------------------------ISPTQQQL-----------------------------------------------------------------------------YAE---HAS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QFEVDGELAKHI-KFLERQG---IA------------------GVSHH------------------------DLLFSKAAP------ELRPDADEEVSAIASF--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [704] lcl|Smo_CHR24_6_1_unnamed_protein_product M----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KSRDDVSPS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TQEHRSCLLEDN---------------------------DLDAALDAASGL--------------VESERDRLIRTGALTPFDRIKGFER---------------------------------------------------------RVQTLSDRQSLERDRLAETSLSNAVASLAAISRSRATTKLLDPAQLPTLEAPTREFRRPPKSL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------DVGRRKKRKRPLPESKWRRKKPHKLPELAA-----------------------------------------------------------------------------------------------------DDNDD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GDDNDVNDEE--CDDDVILEGGLR----IPLDIYDRLFDYQKTGVKWLWE-----LHSL-KT--GGIIGDEMGLGKTVQVIAFLAALHHSRMYS-----------------------------------PSIVVCPVTLTFQWKREVEKWY---PKFDVQVVHESAAPKGKKKEAEDSDASGDDSGDAKRDARL-----------------------ARWDGVVEKTV-----------------RSPSGLIVTTYEQLRLLKDTLL----------------DIDWGYAVLDEGHRIRNPDAETTLICKQ-LQTVHRIIMTGAPIQNKLT-------------------ELWSLFDFVFP-GKLGVLP-------------------------------------VFQAQFALPISIGGYANATSLQVSTAYKCAVTLRDLIMPYIL------RRMKSDV--------------------------------------------------EAKL--TKKTEHVLFCSLTETQ--------------------------------RACYRAFLASS----DVER--------------IFEGS-------------------K--------------------------------N---------ALYGIDILRKICNHPDLLEREASEKH-----------------------------------------------------------------------------------------ADYGLPDRSGKLMVVSQVL------------------------------NSW--------------------------------------KDQGHRVLVFCQTQQMLDIVEIFV--ESQ------------GYTYRRMDGS-TSVKQRPALIDEFNESS-HVFVFLLTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQTKDVIVYRLITRGTIEEKVYHRQIYKQFLTNKIL-R------------------DPQQRR--------------VF-KSKD-----------MRDLFVLHEDAEG--------------------------DKTETSNL-----------------------------------------------------------------------------FPE---LKLPAAAESD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GKEAAHGGEEGDQITRDE------------------------------------------------QDGADESRLLQSLMQAN---G---IH------------------SAMDH------------------------DAILAVNDP------ERVKVDFEASRVAERA----------AEALQQSRLI-RMRDDVAVPT----WTGNSGAAGAPGGGRRRFGAAVNSRLMSPAPPPGTPGASSSRALS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVELLAQMRQRQA?------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [866] lcl|Ppa_CHR24_3_1_unnamed_protein_product ?-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAVED------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSSVLDQISLKDESGGHSVDRSR---------------------------------------------------------------------------------------LVEKQSERKPKDLILNI-------------------RKQMASKSTIVDLETDSEDESFASLDPAASSPSVDYTSADDGDVDSPFVSKTKSKINQPGVLSKTFPSWTTQFHR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSN----------------------------------------------------------------------YDDYH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NDDDDAAFVSPPKIERRATATHTSNEGDRADNEEKDMVLIKGKHRFT----LRAKIANMLYPHQRKGLEWFWS-----LHTK-GM--GGILGDDMGLGKTLQVASFLAGLFCTQNIKC-----------------------------------ALIVAPKTLIAHWVKELKVVG---LSRKTQDYSGTS--------------------------------------------------VKVRESALSHVL------------------QMGGVLLTTYDMVRCNFKALRGDYNGRDGFGDA-SDDIITWDYIILDEGHLVKNPNTQRAKSLRA-IPAAHRIVISGTPIQNHLQ-------------------EMWALFDFCCP-NLLGDRKEYVFRFQNFQQDFYVDEDESIRIARRLALHMRNSFL-MFREKYERQILAGTDKNASDRQKRIGIQVAEELRQKFAPYFL------RRLKSEVFPESNN------------------------------------------LEERKL--SKKNDLIVWLPLSKCQVNFIVTIPKSSRFMLFVHERAYSYSALVITLRERLYRAFLNSN----AAEE--------------TLSTG-------------------T--------------------------------R---------VLSALTVMKKICDHPSLLTKRAAIDIA---EGMEGYLDGEDIQAAEAMTR----------------------------SLAGMVEDDR-------------------------------VHGASCKIDFLMALL------------------------------ENL--------------------------------------VTEGHRTLIFAQTRKMLDIIQ------------------------------------------EFQSDN-DIPLFLLTSQVGGLGLTLTGANRVVIVDPAWNPSTDNQSVDRAYRIGQKKNVVVYRLMTCGTIEEKIYRKQVFKGHLMKVAT-E------------------KKNQMR--------------YF-SQGE-----------LGEMFKVPEAGFR--------------------------VSLTQQQL-----------------------------------------------------------------------------HKE---HFR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QYK?------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [777] lcl|Ppa_CHR24_10_1_unnamed_protein_product M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRTVLDQMSIKDKNGAQSSDRPG---------------------------------------------------------------------------------------ILEKQSERKPRDLILNI-------------------RKRLVKKSTIVDSDNESESESFDGVDP-VSSPSIDYNSADDGDVDSPVVSKVKSKIKPAGVAPRRYPSVDTRPSS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SPN----------------------------------------------------------------------ADVEHVRAPGFRS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VAKGFTETTLNTVDSPPP---SAAVGNLINESD-VPEKQQELVLSDGKHRFC----LRPKTANMLYPHQRSGIEWLWS-----LHMK-GM--GGILGDDMGLGKTMQVAAFLAGLFCTQNIKC-----------------------------------ALIVAPKTLIAHWVKELKVVG---LSRKTYDYSGTS--------------------------------------------------VKAREYALQNVL------------------QMGGVLLTTYDMVRCNFKALRGDFDGRDGYGDT-SDDIITWDYMILDEGHLVKNPNTQRAKSLRE-IPAAHRIVISGTPIQNHLQ-------------------EMWALFDFCCP-DLLGDRKEYAFTLNLFYFDDGRLKN-------------------MFKDKYERQILAGTDKNASDRQKRIGIQVAEELRQKFGPFFL------RRLKSEVFPDSED------------------------------------------KKERKL--SRKNDLIVWLPLSEGQ--------------------------------EKLYRAFLNSN----TAEE--------------TLSTG-------------------T--------------------------------K---------VLSALTVMKKICDHPMLLTKRAANDIA---EGMEGYLDAEDIQAAEAMTH----------------------------SLAGMVQDDED------------------------------MSATSCKIDFLMALLHFQFHFYFACYDIFLMYSWNATNTWLVHEQDNL--------------------------------------VAEGHRTLIFAQTRKMLNIIQDEI--LER------------GWIFRRIDGT-IKAADRELCVQEFQSDD-EIPLFLLTSQVGGLGLTLTGADRVVIVDPAWNPSTDNQSVDRAYRIGQKNDVVIYRLMTCGTIEEKIYRKQVFKGHLMKVAT-E------------------KKNQMR--------------YF-SQGE-----------LGEMFKVPEVGFR--------------------------VSETQLQL-----------------------------------------------------------------------------HKE---HSS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QHKIDEGLQKHI-EFLDGLG---IA------------------GVSHH------------------------DLLFTKEAE------PLPPPGSERSDLNATW----------EP?-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [839] 'gi|22902399|gb|AAH37660.1| Excision repair cross-complementing rodent repair deficiency complementation group 6 - like [Mus mus' M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EASQGLAEVETLSPQLAESYL-------------RYVQEA----------------------------------------------------------------------------KEAAKNGDLEES-------------------------------------LKLFNLAKDIFPTKKVMSRIQKLQE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALE----------------------------------------------------------------------QLAEE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EDDDEFIDV---CSSGLL----LYRELYEKLFEHQKEGIAFLYS-----LYKDGRK--GGILADDMGLGKTVQIIAFLSGMFDASLVNH-----------------------------------VLLIMPTNLINTWVNEFAKWT---PGMRVKTFHGSS--------------------------------------------------KSERTRSLTRIQ------------------QRNGVVITTYQMLLNNWQQLASF-----------NGQAFVWDYVILDEAHKIKSASTKSAVCARA-IPASNRLLLTGTPVQNNLQ-------------------ELWSLFDFACQGSLLGTLK-------------------------------------TFKMEYEHPIIRAREKDATPGEKALGLKISENLMEIIKPYFL------RRTKEEVQTKKADNPEARLGEKNPAGE-----------------------AI---CDMFSL--ARKNDLIVWIRLLPLQ--------------------------------EEIYRKFVSLD----HIKE--------------LLMET-------------------R--------------------------------S---------PLAELGVLKKLCDHPRLLSARACRLLN---LGTATFSAQDENEQEDVSNM----------------------------NSIDHLPDK---------------------------T----LIQESGKMIFLMSLL------------------------------ERL--------------------------------------QDEGHQTLVFSQSIKILNIIERLL--KNK------------HFKTLRIDGTVTHLWEREKRIQLFQQNK-EYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGE------------------KKNPFR--------------YF-TKQE-----------LKELFTVGD--LQ--------------------------KSATQMQL-----------------------------------------------------------------------------QCL---HAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QRRSDEKLDEHI-AYLHLLG---IA------------------GISDH------------------------DLMFTRD-----------LSVKEELDMLEDS----------QYIHQRVQKAQFLVESESQNT---VQRQTTGIEETWLKAQEFPSQQKKKGTEFNKPQPQPSRLLT-KPTQVEAISSQMASITICDQSAESEPQEHSEV----H-DVTSL------------------QG-SHHFNSTSDAGTIASLPQGAESIGEVSTDSLLSP---------------------------------------------------AK-------------------------------------------------------------------GFAAENDAMQKKGLQASPGQEAPSEN-LGSFHYLPRESSKASLGPNLD-LQDSVVLYHRSP-----TANENQNLESDVPMIEISD-DLSEPPSALQGAQAIEAQLELKEDDPLKSPPQYACDFNLFLEDSADTRQNLSSKFLEHVEKEKSLQSPAANSRAKSALT---LSLDSSPKSDEESEVI--SVKTKSKTRRILSDDEDEDEEDAFKGSH-TNSINISPFPFSSVKQFDASTPQSGSNPSRRFFSPKTPGEVNTSLHSRRSLASRRSLINVVLDDVEDMEERLDNSSEEESEPGLSEENNEE----EALACTEEQPSGATLASGNKSSNLTMSEPTSPAPQSSPCAPE-----------------------------------------------------------------------------------------------------PSSSDPMPDPPQDLAVEAGNDYESLVARGKELKECGKIQEALNCLVKALDIKSADPEVMLMTLSLYKQLNI- [1240] 'gi|26324980|dbj|BAC26244.1| unnamed protein product [Mus musculus]' M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EASQGLAEVETLSPQLAESYL-------------RYVQEA----------------------------------------------------------------------------KEAAKNGDLEES-------------------------------------LKLFNLAKDIFPTKKVMSRIQKLQE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALE----------------------------------------------------------------------QLAEE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EDDDEFIDV---CSSGLL----LYRELYEKLFEHQKEGIAFLYS-----LYKDGRK--GGILADDMGLGKTVQIIAFLSGMFDASLVNH-----------------------------------VLLIMPTNLINTWVNEFAKWT---PGMRVKTFHGSS--------------------------------------------------KSERTRSLTRIQ------------------QRNGVVITTYQMLLNNWQQLASF-----------NGQAFVWDYVILDEAHKIKSASTKSAVCARA-IPASNRLLLTGTPVQNNLQ-------------------ELWSLFDFACQGSLLGTLK-------------------------------------TFKMEYEHPIIRAREKDATPGEKALGLKISENLMEIIKPYFL------RRTKEEVQTKKADNPEARLGEKNPAGE-----------------------AI---CDMFSL--ARKNDLIVWIRLLPLQ--------------------------------EEIYRKFVSLD----HIKE--------------LLMET-------------------R--------------------------------S---------PLAELGVLKKLCDHPRLLSARACRLLN---LGTATFSAQDENEQEDVSNM----------------------------NSIDHLPDK---------------------------T----LIQESGKMIFLMSLL------------------------------ERL--------------------------------------QDEGHQTLVFSQSIKILNIIERLL--KNK------------HFKTLRIDGTVTHLWEREKRIQLFQQNK-EYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGE------------------KKNPFR--------------YF-TKQE-----------LKELFTVGD--LQ--------------------------KSATQMQL-----------------------------------------------------------------------------QCL---HAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QRRSDEKLDEHI-AYLHLLG---IA------------------GISDH------------------------DLMFTRD-----------LSVKEELDMLEDS----------QYIHQRVQKAQFLVESESQNT---VQRQTTGIEETWLKAQEFPSQQKKKGTEFNKPQPQPSRLLT-KPTQVEAISSQMASITICDQSAESEPQEHSEV----H-DVTSL------------------QG-SHHFNSTSDAGTIASLPQGAESIGEVSTDSLLSP---------------------------------------------------AK-------------------------------------------------------------------GFAAENDAMQKKGLQASPGQEAPSEN-LGSFHYLPRESSKASLGPNLD-LQDSVVLYHRSP-----TANENQNLESDVPMIEISD-DLSEPPSALQGAQAIEAQLELKEDDPLKSPPQYACDFNLFLEDSADTRQNLSSKFLEHVEKEKSLQSPAANSRAKSALT---LSLDSSPKSDEESEVI--SVKTKSKTRRILSDDEDEDEEDAFKGSH-TNSINISPFPFSSVKQFDASTPQSGSNPSRRFFSPKTPGEVNTSLHSRRSLASRRSLINVVLDDVEDMEERLDNSSEEESEPGLSEENNEE----EALACTEEQPSGATLASGNKSSNLTMSEPTSPAPQSSPCAPE-----------------------------------------------------------------------------------------------------PSSSDPMPDPPQDLAVEAGNDYESLVARGKELKECGKIQESLNCLVKALDIKSADPEVMLMTLSLYKQLNI- [1240] 'gi|62667178|ref|XP 228546.3| PREDICTED: similar to SNF2/RAD54 family protein [Rattus norvegicus]' M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EASQGLAEVGTLSPQLAESYL-------------RYSQEA----------------------------------------------------------------------------KEAAKNGDLEEA-------------------------------------LKLFNLAKDIFPTKKVISRIQKLQE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALE----------------------------------------------------------------------QLAEE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EDDEFTDV---CNSGLL----LYRELYEKLFEHQKEGIAFLYS-----LYKNGRK--GGILADDMGLGKTVQIIAFLSGMFDASLVNH-----------------------------------VLLIMPTNLINTWVKEFAKWT---PGMRVKTFHGSS--------------------------------------------------KNERIRNLTRIQ------------------QRNGVVITTYQMLLNNWQQLASF-----------NGQAFVWDYVILDEAHKIKSASTKSAVCARA-VPASNRLLLTGTPIQNNLQ-------------------ELWSLFDFACQGSLLGTLK-------------------------------------TFKMEYENPIIRAREKDATPGEKALGFKMSENLMEIIKPYFL------RRTKEEVHMKKADKPEVRPGEKNSGVE-----------------------DI---CEMLSL--TRKNDLIVWIRLVPLQ--------------------------------EEIYRKFVSLD----HIKE--------------LLMET-------------------R--------------------------------S---------PLAELGVLKKLCDHPRLLSARACHLLN---LGTVTFSAEDENEQEDASNM----------------------------GSIDHLSDN---------------------------A----LMQESGKMIFLMALL------------------------------ERL--------------------------------------QDEGHQTLVFSQSRQILNIIERLL--KNK------------HFKTLRIDGTVTHLWEREKRIQLFQQNK-EYSVFLLTTQVGGVGLTLTAASRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGD------------------KKNPFR--------------YF-TKQE-----------LKELFTVGD--LL--------------------------NSATQMQL-----------------------------------------------------------------------------QCL---HAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QRKSDEKLDEHI-AYLHSLG---IA------------------GISDH------------------------DLMFTCD-----------LSVKEELDMLEDA----------QYIQHRVQKAQFLVESESQNT------KERPSEENWLKAQEFPSQQRKKG---NKPQPQPSRLLA-NPTQVEAISSQMASISIYDQSTESEPQELSEA----H-DVTSL------------------QGDQHHFESTSDAGTIASLPQGAESIGGVWTDSLLSP---------------------------------------------------AK-------------------------------------------------------------------GFAADNEAVQKNELQASPGQEALSEN-LGSFHYLPRQSSKADLEPNLD-VQDSVVLYHQSP-----TANENQNLESNEPMIEISD-DLSASPSALQGAQAMEAQLELKK-DPLESPPQYECDFNLFLEDSADTRQNLSSKFLEHVEKENSLQRPAGNSGEESAHN---LSLDSSNKIDEESEVI--TVKTKNKARRILSD--DEDEEDAFKDTS-TNSFSVSPLTFSSVKHFDASTPQNDSNPSRRFFSPKIPDDVNTSLHPRRSLASRRSLINVVLDDMEDMEERLDTSSEEESEPELSEDSNE-----EAVACTEEQRSGATLASGNKHSSLTESEPTSPAPQSSPCAPE-----------------------------------------------------------------------------------------------------PSSSDPLLDPPQDPAVEAANDYESLVARGKELKECGKTQEALNCLVKALDIKSADPEVMRMTLSLYKQLNT- [1230] 'gi|55663458|ref|XP 521130.1| PREDICTED: similar to SNF2/RAD54 family protein [Pan troglodytes]' M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FPFSSSSFFFY-------------RYVKEA----------------------------------------------------------------------------KEATKNGDLEEA-------------------------------------FKLFNLAKDIFPNEKVLSRIQKIQE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALE----------------------------------------------------------------------ELAEQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GDDEFTDV---CNSGLL----LYRELHNQLFEHQKEGIAFLYS-----LYRDGRK--GGILADDMGLGKTVQIIAFLSGMFDASLVNH-----------------------------------VLLIMPTNLINTWVKEFIKWT---PGMRVKTFHGPS--------------------------------------------------KDERTRNLNRIQ------------------QRNGVIITTYQMLINNWQQLSSF-----------RGQEFVWDYVILDEAHKIKTSSTKSAICARA-IPASNRLLLTGTPIQNNLQ-------------------ELWSLFDFACQGSLLGTLK-------------------------------------TFKMEYENPITRAREKDATPGEKALGFKISENLMAIIKPYFL------RRTKEDVQKKKSSNPEDRLNEKNPDVD-----------------------AI---CEMPSL--SRKNDLIIWIRLVPLQ--------------------------------EEIYRKFVSLD----HIKE--------------LLMET-------------------R--------------------------------S---------PLAELGVLKKLCDHPRLLSARACCLLN---LG--TFSAQDGNEGEDSPDV----------------------------DHIDQVTDD---------------------------T----LMEESGKMIFLMDLL------------------------------KRL--------------------------------------RDEGHQTLVFSQSRQILNIIERLL--KNR------------HFKTLRIDGTVTHLLEREKRINLFQQNK-DYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGE------------------KKNPFR--------------YF-SKQE-----------LRELFTIED--LQ--------------------------NSVTQLQL-----------------------------------------------------------------------------QSL---HAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QRKSDIKLDEHI-AYLQSLG---IA------------------GISDH------------------------DLMYTCD-----------LSVKEELDVVEES----------HYIQQRVQKAQFLVEFESQNKEFLMEQQRTRNEGAWLREPVFPSSTKKKCPKLNKPQPQPSPLLSTHHTQEEDISSKMASVVIDDLPEEGEKQDLSSI----KVNVTTL------------------QDGK----GTGSADSIATLPKGFGSVQELCTNSSLGM----------------------------------------------------------------------------------------------------------------------------------------------------ESFNYVLSKSTKADIGPNLDQLKDDEILRHCKPWPIISITNESQNAESNVSIIEIAD-DLSASHSALQDAQASEAKLEE---EPSASSPQYACDFNLFLEDSADNRQNFSSQSLEHVEKENSLCGSAPNSRAGFVHSKTCLSWEFSEKDDEPEEVVVKA-KIRSKARRIVSD--GEDEDDSFKDTSSINPFNTSLFQFSSVKQFDASTPKNDISPPGRFFSSQIPSSVNKSMNSRRSLASRRSLINMVLDHVEDMEERLDDSSEAKGPEDYPEEGVEESS-GEASKYTEEDPSGETLSSENKSSWLMTSKPSALAQETSLGAPE-----------------------------------------------------------------------------------------------------PLSGEQLVGSPQDKAAEATSDYETLVKRGKELKECGKIQEALNCLVKALDIKSADPEVMLLTLSLYKQLNNN [1210] 'gi|58331268|ref|NP 060139.2| hypothetical protein LOC54821 isoform a [Homo sapiens] >gi|84798788|gb|AAI11487.1| Hypothetical pr' M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EASRRFPEAEALSPEQAAHYL-------------RYVKEA----------------------------------------------------------------------------KEATKNGDLEEA-------------------------------------FKLFNLAKDIFPNEKVLSRIQKIQE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALE----------------------------------------------------------------------ELAEQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GDDEFTDV---CNSGLL----LYRELHNQLFEHQKEGIAFLYS-----LYRDGRK--GGILADDMGLGKTVQIIAFLSGMFDASLVNH-----------------------------------VLLIMPTNLINTWVKEFIKWT---PGMRVKTFHGPS--------------------------------------------------KDERTRNLNRIQ------------------QRNGVIITTYQMLINNWQQLSSF-----------RGQEFVWDYVILDEAHKIKTSSTKSAICARA-IPASNRLLLTGTPIQNNLQ-------------------ELWSLFDFACQGSLLGTLK-------------------------------------TFKMEYENPITRAREKDATPGEKALGFKISENLMAIIKPYFL------RRTKEDVQKKKSSNPEARLNEKNPDVD-----------------------AI---CEMPSL--SRKNDLIIWIRLVPLQ--------------------------------EEIYRKFVSLD----HIKE--------------LLMET-------------------R--------------------------------S---------PLAELGVLKKLCDHPRLLSARACCLLN---LG--TFSAQDGNEGEDSPDV----------------------------DHIDQVTDD---------------------------T----LMEESGKMIFLMDLL------------------------------KRL--------------------------------------RDEGHQTLVFSQSRQILNIIERLL--KNR------------HFKTLRIDGTVTHLLEREKRINLFQQNK-DYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGE------------------KKNPFR--------------YF-SKQE-----------LRELFTIED--LQ--------------------------NSVTQLQL-----------------------------------------------------------------------------QSL---HAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QRKSDIKLDEHI-AYLQSLG---IA------------------GISDH------------------------DLMYTCD-----------LSVKEELDVVEES----------HYIQQRVQKAQFLVEFESQNKEFLMEQQRTRNEGAWLREPVFPSSTKKKCPKLNKPQPQPSPLLSTHHTQEEDISSKMASVVIDDLPKEGEKQDLSSI----KVNVTTL------------------QDGK----GTGSADSIATLPKGFGSVEELCTNSSLGM---------------------------------------------------EK-------------------------------------------------------------------SFATKNEAVQKETLQEGPKQEALQEDPLESFNYVLSKSTKADIGPNLDQLKDDEILRHCNPWPIISITNESQNAESNVSIIEIAD-DLSASHSALQDAQASEAKLEE---EPSASSPQYACDFNLFLEDSADNRQNFSSQSLEHVEKENSLCGSAPNSRAGFVHSKTCLSWEFSEKDDEPEEVVVKA-KIRSKARRIVSD--GEDEDDSFKDTSSINPFNTSLFQFSSVKQFDASTPKNDISPPGRFFSSQIPSSVNKSMNSRRSLASRRSLINMVLDHVEDMEERLDDSSEAKGPEDYPEEGVEESS-GEASKYTEEDPSGETLSSENKSSWLMTSKPSALAQETSLGAPE-----------------------------------------------------------------------------------------------------PLSGEQLVGSPQDKAAEATNDYETLVKRGKELKECGKIQEALNCLVKALDIKSADPEVMLLTLSLYKQLNNN [1250] 'gi|74007793|ref|XP 549075.2| PREDICTED: similar to excision repair cross-complementing rodent repair deficiency complementation' M----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RSVGAGEIQSSVEIPGTKLRVMEASRGSVEAAALSPEQAALYQ-------------RYVKEA----------------------------------------------------------------------------KEATKNGDLEEA-------------------------------------FKLFNLAKDIFPNEKVMSRIQKIQE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALE----------------------------------------------------------------------ELAEH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GDDEFTDV---CNSGLL----LYRELHNQLFEHQKEGVAFLYS-----LYRDGRK--GGILADDMGLGKTVQIIAFLSGMFDATLVSH-----------------------------------VLLIMPTNLISTWIKEFVKWT---PGMRVKTFHGSS--------------------------------------------------KDERTRNLNRIQ------------------QRNGVIITTYQMLINNWQQLSSL-----------NGQEFVWDYVILDEAHKIKTSSTKSAICARA-VPARNRILLTGTPIQNNLQ-------------------ELWSLFDFACQGSLLGTLK-------------------------------------TFKIEYENPIMRAREKDATPGEKALGLKISENLMAIIKSHFL------RRTKEEVQKKSSTPEEIRFSEKNPDGD-----------------------AI---CKMPSL--SRKNDLIIWIRLRPLQ--------------------------------EEIYRKFVSLD----HIKE--------------LLMET-------------------R--------------------------------S---------PLAELGVLKKLCDHPRLLSARARHLLS---LGSVKFSVQGENEGEDASDV----------------------------DHIDHVTDD---------------------------T----LMEESGKMIFLIELL------------------------------RRL--------------------------------------RDEGHQTLVFSQSRQILNIIERLL--KNR------------HFKILRVDGTVTHLVEREKRIHLFQQNK-DYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENIVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGD------------------KKNPFR--------------YF-TKQE-----------LRELFTIED--FQ--------------------------NSATQLQL-----------------------------------------------------------------------------QSL---HAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QRRSDKILDEHI-AYLHSLG---IA------------------GISDH------------------------DLMYTRD-----------LSVKEELDVIEES----------HYIQQRVQKAQFLVELESQNTELLVEKQRTGNEGTWLREPLFPSQTKKKCPEMNKPQPWPSSHLPTYHIQEEVISSQMASVIIDDLPKENENQDISNI----KMNVTVL------------------QDGSHSLVSTSDADSVAILPKGCGCVDEIWTNSS--------------------------------------------------------------------------------------------------------------------------------GMAIQKEALREGPTQGTLQKNPLGNFNYFLSESVRDDLGPNPDQLKDDETLPHCSPWPINPMTNENQNTESHASVIEIADEEWSASRSALQDAQVHEAKLEE---EPLASSSQYACDFNLFLEDSADNEQNFSSQSLQHAENENSLCGPAANSKAESERGEVRLSLDLSETQDDPEVVIGNMKKGRRKARRILSD--GENEDKTFQDTPGTNLF-TSPCQFLPIKQFDASTPKSDISPPGRFFALKIPDSINKSVNARRSLASRRSLVNVVLDHVEDMEEGPDNSSKAEVAEDYLEEGAEESS-GEVSEYT-EDPPDETLPSEHKSSWLTTREPGALVQEASPGDPE-----------------------------------------------------------------------------------------------------PLLGRQLVDSPQDEAVEAVNDYEALVIRGKELKECGKIQEALNCLVKALDIKSADPEVMLMTLNLYKQLNKT [1268] 'gi|58331270|ref|NP 001009954.1| hypothetical protein LOC54821 isoform b [Homo sapiens]' ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGLGKTVQIIAFLSGMFDASLVNH-----------------------------------VLLIMPTNLINTWVKEFIKWT---PGMRVKTFHGPS--------------------------------------------------KDERTRNLNRIQ------------------QRNGVIITTYQMLINNWQQLSSF-----------RGQEFVWDYVILDEAHKIKTSSTKSAICARA-IPASNRLLLTGTPIQNNLQ-------------------ELWSLFDFACQGSLLGTLK-------------------------------------TFKMEYENPITRAREKDATPGEKALGFKISENLMAIIKPYFL------RRTKEDVQKKKSSNPEARLNEKNPDVD-----------------------AI---CEMPSL--SRKNDLIIWIRLVPLQ--------------------------------EEIYRKFVSLD----HIKE--------------LLMET-------------------R--------------------------------S---------PLAELGVLKKLCDHPRLLSARACCLLN---LG--TFSAQDGNEGEDSPDV----------------------------DHIDQVTDD---------------------------T----LMEESGKMIFLMDLL------------------------------KRL--------------------------------------RDEGHQTLVFSQSRQILNIIERLL--KNR------------HFKTLRIDGTVTHLLEREKRINLFQQNK-DYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGE------------------KKNPFR--------------YF-SKQE-----------LRELFTIED--LQ--------------------------NSVTQLQL-----------------------------------------------------------------------------QSL---HAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QRKSDIKLDEHI-AYLQSLG---IA------------------GISDH------------------------DLMYTCD-----------LSVKEELDVVEES----------HYIQQRVQKAQFLVEFESQNKEFLMEQQRTRNEGAWLREPVFPSSTKKKCPKLNKPQPQPSPLLSTHHTQEEDISSKMASVVIDDLPKEGEKQDLSSI----KVNVTTL------------------QDGK----GTGSADSIATLPKGFGSVEELCTNSSLGM---------------------------------------------------EK-------------------------------------------------------------------SFATKNEAVQKETLQEGPKQEALQEDPLESFNYVLSKSTKADIGPNLDQLKDDEILRHCNPWPIISITNESQNAESNVSIIEIAD-DLSASHSALQDAQASEAKLEE---EPSASSPQYACDFNLFLEDSADNRQNFSSQSLEHVEKENSLCGSAPNSRAGFVHSKTCLSWEFSEKDDEPEEVVVKA-KIRSKARRIVSD--GEDEDDSFKDTSSINPFNTSLFQFSSVKQFDASTPKNDISPPGRFFSSQIPSSVNKSMNSRRSLASRRSLINMVLDHVEDMEERLDDSSEAKGPEDYPEEGVEESS-GEASKYTEEDPSGETLSSENKSSWLMTSKPSALAQETSLGAPE-----------------------------------------------------------------------------------------------------PLSGEQLVGSPQDKAAEATNDYETLVKRGKELKECGKIQEALNCLVKALDIKSADPEVMLLTLSLYKQLNNN [1127] 'gi|26351189|dbj|BAC39231.1| unnamed protein product [Mus musculus] >gi|26351187|dbj|BAC39230.1| unnamed protein product [Mus mu' M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EASQGLAEVETLSPQLAESYL-------------RYVQEA----------------------------------------------------------------------------KEAAKNGDLEES-------------------------------------LKLFNLAKDIFPTKKVMSRIQKLQE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALE----------------------------------------------------------------------QLAEE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EDDDEFIDV---CSSGLL----LYRELYEKLFEHQKEGIAFLYS-----LYKDGRK--GGILADDMGLGKTVQIIAFLSGMFDASLVNH-----------------------------------VLLIMPTNLINTWVNEFAKWT---PGMRVKTFHGSS--------------------------------------------------KSERTRSLTRIQ------------------QRNGVVITTYQMLLNNWQQLASF-----------NGQAFVWDYVILDEAHKIKSASTKSAVCARA-IPASNRLLLTGTPVQNNLQ-------------------ELWSLFDFACQGSLLGTLK-------------------------------------TFKMEYEHPIIRAREKDATPGEKALGLKISENLMEIIKPYFL------RRTKEEVQTKKADNPEARLGEKNPAGE-----------------------AI---CDMFSL--ARKNDLIVWIRLLPLQ--------------------------------EEIYRKFVSLD----HIKE--------------LLMET-------------------R--------------------------------S---------PLAELGVLKKLCDHPRLLSARACRLLN---LGTATFSAQDENEQEDVSNM----------------------------NSIDHLPDK---------------------------T----LIQESGKMIFLMSLL------------------------------ERL--------------------------------------QDEGHQTLVFSQSIKILNIIERLL--KNK------------HFKTLRIDGTVTHLWEREKRIQLFQQNK-EYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [577] 'gi|39652280|dbj|BAD04853.1| Cockayne syndrome group B [Oryza sativa (japonica cultivar-group)] >gi|20804446|dbj|BAB92143.1| put' M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EDDDDDQRLLHSLGVTSADIHDIERRIISQATTDPA-------------------------------------------------------------------------------------------------------------------------------------------DSSGPTINGGHQPDDALAKLHHKLRSVQIEIDAVASTIKGAKLKQPSGNKPHEHKGKDQPDHHGAGHLQQALAADRLTSLR-----------------------------------------------------------------------KAKAQIQKEILQSHPSPSASNR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KDKMLAMLVQDEPRHKKPPVGPKNIVKRPMKTVTYDDDNNFDAVLDGASAGF-------------METEREELIRKGLLTPFHKLKGFEK---------------------------------------------------RVELPEPSHRQDDSAGQTEEAMEASRIARVAQSLKQIAQNRPATKLLDSESLPKLDAPAAPFQRLGKPLKR---------------------------------------------------------------------------------------------------------------------------------------------------------------PVSPSSDEQEKKRPRNKTKRPLPGKKWRKANSIKESSL-------------------------------------------------------------------------------------------------------DDNDVGEAAVSVS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDDEDQVTEGSDELTDVTLEGGLR----IPGTLYTQLFDYQKVGVQWLWE-----LHCQ-RA--GGIIGDEMGLGKTVQVLSFLGSLHNSGLYK-----------------------------------PSIVVCPVTLLQQWRREASRWY---PKFKVEILHDSANSS---------SKKSKRSSDSDSEASWDSD---------QEEAVTCSKPAKKWDDLISRVV-----------------SSGSGLLLTTYEQLRILGEKLL----------------DIEWGYAVLDEGHRIRNPNAEITLVCKQ-LQTVHRIIMTGAPIQNKLS-------------------ELWSLFDFVFP-GKLGVLP-------------------------------------VFEAEFSVPITVGGYANATPLQVSTAYRCAVVLRDLVMPYLL------RRMKADV--------------------------------------------------NAQL--PKKTEHVLFCSLTTEQ--------------------------------RATYRAFLASS----EVEQ--------------IFDGN-------------------R--------------------------------N---------SLYGIDVLRKICNHPDLLEREHAAQN-----------------------------------------------------------------------------------------PDYGNPERSGKMKVVEQVL------------------------------KVW--------------------------------------KEQGHRVLLFTQTQQMLDIMENFL--TAC------------EYQYRRMDGL-TPAKQRMALIDEFNNTD-EIFIFILTTKVGGLGTNLTGANRIIIYDPDWNPSTDMQARERAWRIGQTRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKVL-K------------------DPQQRR--------------FF-KARD-----------MKDLFTLQDDDNN--------------------------GSTETSNI-----------------------------------------------------------------------------FSQ---LSEDVNIGVP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDKQQDQLYAASATPTTSGTEPSSSRHG----------------------------------------QGKEDHCPDQADEECNILKSLFDAQ---G---IH------------------SAINH------------------------DAIMNANDD------QKLRLEAEATQVAQRA----------AEALRQSRML-RSHESFSVPT----WTGRAGAAGAPSSVRRKFGSTLNTQLVNSSQPSETSNGRGQSLQVGALNGKALS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAELLARI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RGTREGAASDALEHQLNLGSASNHTSSSSGNGRASSSSTRSMIVQPEVLIRQLCTFIQQHG---GSA-----------------------------------------------------------------------------------------------------SSTSITEHFKNRILSK--DMLLFKNLLKEIATLQRGANG--ATWVLKPDYQ--------------------- [1187] 'gi|50548883|ref|XP 501912.1| hypothetical protein [Yarrowia lipolytica] >gi|49647779|emb|CAG82232.1| unnamed protein product [Y' M----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DELSRLSVDVV---DQGTLENQITNEADSILK---------------KR---------------------EFEIDTKRLS------------------------------------------------------------------------------------------------------KAQDAEKTFLSKLRSMERKINDPA---------------------------------------------------TKISEREKLKRDVATLKR------------------------------------------------TELATVQQDISDIRQR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQENDTS--------------------------------SATTELQASDRHE-------------GESEQEYLVRTGKITPFANTRGFTRGKGDVTQNIDTSKPYTSSTITELGDIKEDDDD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DGEDEIKDEEDAEDDADAYSSGYTTDEIEPEDMELVELKKKRRRTERPET-------------------------------EAI----------------------------------------------------------------------DDGDEWSYQQRLN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WWVEKRQKARARAGVIVPAS-------------------------------------------------------------------------------------DYAKEEWLLDGPE-ADAILEGNFK----VPGEIFNALFDYQKTCVQWLWE-----LHTQ-KT--GGIIGDEMGLGKTIQIISFLAGLHHSGLLTK----------------------------------PVIVVCPATVMKQWVEEFHKWW---PALRVVILHSMGEGS---------KGKKKRKGEIDSDDDD------------DEMIRPTPSSTKNLVETIDKVF------------------KDGHVVVTTYAGLKSYRSLLL----------------DREWGYCILDEGHKIRNPDSQITLDCKQ-LKTVHRLILSGTPIQNNLT-------------------ELWSLLDFVCP-GRLGTLP-------------------------------------VFHSQFAVPINVGGYANATNIQVQTAYKCAVVLRDLIAPYLL------RRMKTDV--------------------------------------------------ATDL--PKKEEKVLFCKLTDSQ--------------------------------RLHYKGFLKSE----ELKS--------------ILAGK-------------------R--------------------------------Q---------SLFGIDILRKICNHPDLASREILKKTA---------------------------------------------------------------------------------------DYYYGDPAKSGKMQVVKALV------------------------------DLW--------------------------------------KKQGHRTLLFCQTRQMLEILEDFF--ANMP-----------DIKYLRMDGT-TPISKRQDMVDTYNKDT-SYDLFLLTTRVGGLGVNLTGANRVIIFDPDWNPSTDLQARERSWRLGQKRNVVVYRLMTAGTIEEKIYHRQIFKQFLTNKIL-K------------------DAKQRR--------------FF-KMND-----------IHDLFSLDDGEGD---------------------------TTETGMI-----------------------------------------------------------------------------FSG---SEKKIENKKP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKKMKDDDDFYQVVGLN------GVSKLEKFENGEEERA------------------------ESNDGDNDDNILNDIFSQT---G---VH------------------SALEH------------------------DAIMDASRP------ETVIIEREAKRVAEVA----------AKALRDSRKK-AQANDIGTVT----WTGKFGSAGKFGKKKQSAGKVGVPKFGSDK----------------------------------------------------------------------------------------------------------------------------------------------------------------FS-------------------------------------------------------------------SSSILQNI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KAKKSLEESTNAY-----------------------TGLINMSDLDKVKLLEKISESLKLAG--AGGL-----------------------------------------------------------------------------------------------------SSKDIANEFALKLTNQE-EVAVMRQLLRQAGEWNGATKK----WRYKAVEDVGDEDEEIQEVVPVDEMGNKL [1085] 'gi|50749484|ref|XP 421656.1| PREDICTED: similar to DNA excision repair protein ERCC-6 (Cockayne syndrome protein CSB) [Gallus g' M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PTENSHLPDSIQEQDPI--TTLSSICPHNAEQKGTEQENGICNSDLVNHFGVHNSDSKPSTS-VAVPVEVPRRGQPLLHINRQQIQSVSHSAQAAELKGLGVDVY---DQEVLEQGVIQQVDNAIN---------------EANRATKIADAEKEYQSVLDDLRSCTTSLKQID------------------------------------------------------------------------------------------------------KIIEQLSPQATNNKDINRKLDSVK---------------------------------------------------------------------------------------------------------------------RQKYNKEQQLKKIKAKQKRLQAVLGGTE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IL-DKVNEIEFEDDEVLFLCQSYSESVEGIVVILFFVTEPGPSSLGSMLMPI-------------QETEWEELIRTGQMTPFGTKIPQKP----------------------------------------ERK-TRRLMLNEASDFEKYLADQAKLSSERKKLALHKRVKKKAQAKNVQCVAPTS--ATKEKRGKALSKTDKRLKKHLKKLQKH----------------------------------------------------------------------------------------------------ALQVHSKAGIPKEKKNLETTKLKPGQKDDSG-E-----SDYVPDEH-LEPEAVEEEE-EQASSHAENDSDYELRNLSG---KGKYLVKRDSKDAGNDTDYFPSSEEEEHTV-------GKRKVKRWR-----------------------------------------------------------------------DDGDEDYYKQRLS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SFTLPYFCCYGC-------PANGKSPRQQEAVCMLLDCQGLFFSLIQASTFNYEYGKSIQIMMS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TMPLIAVHASFESVLSGLRRTRLFTGERRGFWKWQRERLKD------------------------------------------------------------------------------------------------K-ERSVA-EELSDESDTEFEEGFK----VPGFLFKKLFKYQQTGVRWLWE-----LHCQ-QA--GGILGDEMGLGKTIQIIAFLAGLSYSKIRTR------------------------GSNYRYQGLGPTVIVCPATVMHQWVKEFHTWW---PPFRVAILHETGSYT------------------------------------------------NKKVKLIREIA------------------SCHGILITSYSYIRLMQDNIH----------------SYDWHYVILDEGHKIRNPNAAVTLACKQ-FRTPHRIILSGSPMQNNLK-------------------ELWSLFDFVFP-GKLGTLP-------------------------------------VFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDAINPYLL------RRMKADV------------------------------------------------KMSLSL--PDKNEQVLFCRLTDEQ--------------------------------RQVYQNFIDSK----EVYQ--------------ILNGD-------------------M--------------------------------Q---------VFSGLVALRKICNHPDLFSGGPKILKC-------------------------------------------------------------------------------VPDADLEEADQFGYWKRSGKMIVVESLL------------------------------KIW--------------------------------------HKQGHRVLFFTQSRQMLQILEVFL--RDR------------NYSYLRMDGT-TTIASRQPLITRYNEDK-SIFIFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVL-K------------------DPKQRR--------------FF-KSND-----------LYELFTLSSPDVS--------------------------QGTETSAI-----------------------------------------------------------------------------FAG---TGSDVQVPKHQLKRKLERPADDDTLKGGLHLKKSSSPKYSKSSSSHLTRHRANSSEAIETSEEAKGNLETFDQNSYAKDNAETATDINSVNKSKQESLERADISLSQSLPGGAGSSENAKVTEEEHEVANENAEGDFSLLCGAAGSQEKQVDKT-EDGQLDNNHYKCTSKTK-HRV----DMLSHDSHKEKSK-KKHHKDAKFEGERIP------HLVKQKRYKKEDSE-E-----------------------KELDPKKNDDYVLEKLFKKT---G---VH------------------SVMKH------------------------DAIMEASSA------DYVLVEAEANRVAQDA----------LRALKVSRQR-CLGAASGVPT----WTGVSGLSGAPSGVKSRFGQKRNPMLLSSHSTCVSPM-KKCKDADTMKKENVKKNSSNGHFDGKSETGESSSS----ILD-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSSLLAKM-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RARNHLILP--QRTGNEGDDNLH-QASAPAPGSTEYDELLVDVRNFIAFQARVDGEA-----------------------------------------------------------------------------------------------------STQEILQEFESKLPAA--QSCVFRELLRNLCSFHRNPNG-EGVWRLKPEFR--------------------- [1607] 'gi|62662210|ref|XP 224627.3| PREDICTED: similar to DNA excision repair protein ERCC-6 (Cockayne syndrome protein CSB) [Rattus n' M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHEEIPNSTQPQGQDWL-----PGQHVSADRDIPAGQETA-GDSEAGKCLSSPSCDHGPSTSAEACVLAATRWGPALLHIDRHQIPAVEPSAQALELQGLGVDVY---DQAVLEEGVLQQVDSAMH---------------EASRVAQRADAEKEYQSVLDDLMSCTTSLRQIN------------------------------------------------------------------------------------------------------KIIEQLSPQAASNRDINRKLDSVK---------------------------------------------------------------------------------------------------------------------RQKYNKEQQLKKITAKQKRLQAILGGAE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VH-VELDHGSLEEED----------------------AEPGPSCLGSMLMPA-------------QESAWEELIRTGQMTPFGTPAPQKQ----------------------------------------EKK-PRKIMLNEASGFEKYLADQAQLSFKRKKQAANKRTAKKAV--VVSESSRGPNETKPNQRSQALSQTDKRLKKHIRKLQRR----------------------------------------------------------------------------------------------------ALQFQGKVGLQRGKRPLEPEERPGAEGDTEGEE-----SGSSPTDG-EEEEEQ-EEE-GV-AVLSSDDISYELKPLRK---GQKYEKKVPVQEI--DDDFFPSSEEEDEAV---EGRGGGRKVSRRP-----------------------------------------------------------------------DDGDEDYYKQRLR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RWNRLRLQD------------------------------------------------------------------------------------------------K-EK-LKLEDDSEESDAEFDEGFK----VPGFLFKKLFKYQQTGVRWLWE-----LHCQ-QA--GGILGDEMGLGKTIQIIAFLAGLSYSKIRTR------------------------GSNYRFEGLGPTLIVCPTTVMHQWVKEFHTWW---PPFRVAILHETGSCA------------------------------------------------HRKERLVRDIV------------------HCHGVLITSYSYIRLMQDDIS----------------RHDWHYVILDEGHKIRNPNAAVTLACKQ-FRTPHRIILSGSPMQNNLR-------------------ELWSLFDFTFP-GKLGTLP-------------------------------------VFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLL------RRMKSDV------------------------------------------------KMSLSL--PDKNEQVLFCRLTDEQ--------------------------------HKVYQNFIDSK----AVYR--------------ILNGE-------------------N--------------------------------Q---------IFSGLVALRKICNHPDLFSGGPKNTSA-------------------------------------------------------------------------------LPEDGLEE-EQFGYWKRSGKMIVVESLL------------------------------KIW--------------------------------------HKQGQRVLLFSQSRQMLHILEVFL--RAH------------KYSYLKMDGT-TTIASRQPLITKYNEDT-SIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVL-K------------------DPKQRR--------------FF-KSND-----------LYELFTLTSPDAS--------------------------QGTETSAI-----------------------------------------------------------------------------FAG---TGSNIQTLKCHFKKRTPPVLQMD-------------PKRKKPLVSDTSVNGATVMEEKSQGSGATG-SVPSTESGPLKSDRHTDGSRASSVGFGEEADAGSTLEHLSGLSG-----DSPAVDHTSRLSAVASTSEKQGSSYEGE-CCQAQTGPVHLSEQTEGHFSKHKSKRK-HDAAEEETTEKCPQPKQKAKNSRHHRDAKFEGTRVP------HLVKKRRYHQQTTEQE-----------------------SGAKDRSSDDYVLEKLFKKS--VG---VH------------------SVVKH------------------------DAIIDGSSP------DYVLVEAEANRVAQDA----------LKALRLSRQQ-CLGATSGVPT----WTGHRGISGAPAGVKKRFGQKRNSSLPVQRPSSL--T-ERTQ-N--MKKEG--EAHTAEHFSGK-EDGASSSG----APS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSSLLARM-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RARNHMILP--ERLESDGEQLAGAAAAAAPPCSTEHDALLVDMRNFIAFQAQVDGQA-----------------------------------------------------------------------------------------------------STQEILQAFESKLSVA--QSCVFRELLRNLCNFHRTPGG-EGIWKLKPEYC--------------------- [1474] gnl|CMER|CMO092C_DNA_repair_and_recombination_protein_RAD26 M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAPNSTSYVARSDALVTDPAVQVVDEGKLVVDIVQKAHRDLI---------------EQTRQQILVLEQETNELLQ--------------------------------------------------------------------------------------------------------------------QVLGSEHGAGTSSQRAQRSDDACDA--------------------------------------------------GSVAASGRARRRLHYLHN-------------------------------------------------RLEQLRSELVELEAE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QVHELGDLASTDGY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RNGEVSFTPTGSP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DALASQQLARTLEAGHAVGTEAAMELAPGLW----LPRSLYERLFPYQKEGLVWLWS-----LHVQ-GT--GGILGDEMGLGKTVQIIAFLAALDYSGLLKG----------------------------------PILVVAPVTVLDQWRRELETWW---PRLQVRVLHAVL--------------------------------------------------GIGESALQPNQC------------------PSQVIFITNYEHLRIHASWFT----------------SRRWDYVILDEGHRIRNPEAEVTRVCKQ-LNTVHRILMTGAPLQNRLC-------------------ELWSLFDFIYP-GRLGTLQ-------------------------------------SFEEEFSIPISLGGFANATPAQVHIAYRCASTLRDLIAPYLL------RRLKRDV--------------------------------------------------ALQL--PQKQEHVLLCRLTPEQ--------------------------------RRIYQNYLNAI----DVER--------------AADGQ-------------------L--------------------------------N---------LLPIITTLRKICNHPRLAAADLHVSGS---------------------------------------------------------------------------------------ERKLLRQSTSGKLLALDRLL------------------------------HQL--------------------------------------RETNHRALIFSQTRSMLTLLEKTL--NKG------------QFTYLRMDGE-TNVALRAELVDRFNHDS-SIFAFLLTTRVGGLGLNLIGADRVIIYDPDWNPASDTQARERAWRIGQERPVVVYRLLTRGTIEEKIYHRQIFKTFLSEKVL-H------------------DPRKRR--------------FF-KRKD-----------IHELLTLHEDATD--------------------------EDFVQVQA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TARESLAPVSVAAAAGDDADADNHCKLDAKQNEQLTAEMRIMRQLLDGNDARALDQVA------------------AVFNH------------------------DSTLEVSGKHPRTAFDRQVLQAEADRVAQRA----------LAALRRSLNHQTPTTPLPEPTTQAPWLCSTATANRAPSSKLA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SQALLQCL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HEREAVDDDEEQVRKLQSLVHEITSYLQRRGPGA--------------------------------------------------------------------------------------------------------TTAELAGAFKSSLRVRGINAAEFRAVLKLVAYLSESGDGNRAVWRLRASALLPDTSPET------------- [917] lcl|Ppa_CHR24_6_1_unnamed_protein_product M-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTPFDKVKGFER----------------------------------------------------------KVHRVPKAESEDELRARQAAANLASSLAASAMFRPTSRLLDASELPSQEPPMREFRRLRTPLKTVR-------------------------------------------------------------------------------------------------------------------------------------------------------------PESEECQRQAKKKSDKRPKRPQVDKKWRKRPDESDEDFVV-----------------------------------------------------------------------------------------------------DEEDESWSEGEEG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RPKKRSRRSKAMPKQDPEDEASAEEEGLNEDDVVLDGGLR----IPAKIYNKLFDYQKTGVKWLWE-----LHCQ-KA--GGIIGDEMGLGKTIQVLVFLAGLHNSGMYT-----------------------------------PSIVVCPVTLLRQWKREAKKWY---PAFNVEILHDSAVASQKSSNKKKRKPKRGSDEEFDEEESDYSE---------NEQEKPVKVKKDRWDGMIDRVV-----------------DSSDGIILTTYEQLRIVRDKLL----------------DINWGYAILDEGHRIRNPDAGTTLICKQ-LQTVHRIIMTGAPIQNRLT-------------------ELWSLFDFVFP-GKLGVLP-------------------------------------VFQAQFSLPIAIGGYSNATPLQVSTAYRCAVVLRDLIMPYLL------RRMKSDV--------------------------------------------------DAHL--PKKTEHVLFCSLTKDQ--------------------------------RSAYRAFLASS----EVEQ--------------IFDGN-------------------R--------------------------------N---------SLFGIDILRKICNHPDLLEREHSAGH-----------------------------------------------------------------------------------------PDYGNIERSGKLKVLAQVL------------------------------ELW--------------------------------------KTQGHRVLLFTQTQQMLDIVENYV--TSK------------GYVYRRMDGN-TPVKQRMQLIDEFNEGD-HVFIFILTTKVGGLGTNLIGANRVVIFDPDWNPSTDMQARERAWRIGQKKEVVIYRLITRGTIEEKVYHRQIYKHFLTNKIL-R------------------DPQQRR--------------FF-KARD-----------MRDLFTLQEENAA----------------------------TETSTL-----------------------------------------------------------------------------FAE---VGGSIQLEDE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ESENVGKDVQDSGSNRRQRGTKKDSQEEA--------LNKHRPEQDNSHNS-----------------------EDGEPQEEESRILKNLFDAN---G---IHIRTDSLIMLFLLHPYVKQSAMDH------------------------DAILGIHES------ER----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [824] 'gi|55769661|ref|XP 549820.1| putative RAD26 [Oryza sativa (japonica cultivar-group)] >gi|52076609|dbj|BAD45511.1| putative RAD2' ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGLGKTVQVLSFLGSLHNSGLYK-----------------------------------PSIVVCPVTLLQQWRREASRWY---PKFKVEILHDSANSS---------SKKSKRSSDSDSEASWDSD---------QEEAVTCSKPAKKWDDLISRVV-----------------SSGSGLLLTTYEQLRILGEKLL----------------DIEWGYAVLDEGHRIRNPNAEITLVCKQ-LQTVHRIIMTGAPIQNKLS-------------------ELWSLFDFVFP-GKLGVLP-------------------------------------VFEAEFSVPITVGGYANATPLQVSTAYRCAVVLRDLVMPYLL------RRMKADV--------------------------------------------------NAQL--PKKTEHVLFCSLTTEQ--------------------------------RATYRAFLASS----EVEQ--------------IFDGN-------------------R--------------------------------N---------SLYGIDVLRKICNHPDLLEREHAAQN-----------------------------------------------------------------------------------------PDYGNPERSGKMKVVEQVL------------------------------KVW--------------------------------------KEQGHRVLLFTQTQQMLDIMENFL--TAC------------EYQYRRMDGL-TPAKQRMALIDEFNNTD-EIFIFILTTKVGGLGTNLTGANRIIIYDPDWNPSTDMQARERAWRIGQTRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKVL-K------------------DPQQRR--------------FF-KARD-----------MKDLFTLQDDDNN--------------------------GSTETSNI-----------------------------------------------------------------------------FSQ---LSEDVNIGVP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDKQQDQLYAASATPTTSGTEPSSSRHG----------------------------------------QGKEDHCPDQADEECNILKSLFDAQ---G---IH------------------SAINH------------------------DAIMNANDD------QKLRLEAEATQVAQRA----------AEALRQSRML-RSHESFSVPT----WTGRAGAAGAPSSVRRKFGSTLNTQLVNSSQPSETSNGRGQSLQVGALNGKALS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAELLARI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RGTREGAASDALEHQLNLGSASNHTSSSSGNGRASSSSTRSMIVQPEVLIRQLCTFIQQHG---GSA-----------------------------------------------------------------------------------------------------SSTSITEHFKNRILSK--DMLLFKNLLKEIATLQRGANG--ATWVLKPDYQ--------------------- [789] lcl|2231_Cre_unnamed_protein_product ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QMIAYLAGLHASGLYR-----------------------------------PSLIVCPATVLRQWMRELRTWA---PALRVVLLHESGRNPPSRTGAGRRGEAGGGGERA------------------RQGARTSPTPGAPGSGSGSGAS-----------------VSYPGVVLTTYDQLRLHRDLLL----------------RVRWGVAVLDEGHKIRNPDSEITLVCKQ-LHTVHRLIMSGSPIQNRLS-------------------ELWSLFDFIFP-GKLGTLP-------------------------------------VFQAQFAVPIQVGGYANASSLQVTTAYKCAVVLRDLIAPYLL------RRRKADV--------------------------------------------------AAQL--PAKTEQVLFCTLVSEQ--------------------------------LELYRSYLASK----EVGE--------------ILEGS-------------------R--------------------------------R---------ALCGIDILRKVCNHPDLLERLSAQDA-----------------------------------------------------------------------------------------EDYGNPARSGKLRVAERVL------------------------------DSW--------------------------------------RAAGHKALLFCQTQQMLDIFEKLA--RSKKSP---------AWSYHRMDGG-TPVASRSRLIDDFNNNP-DVFLFLLTTKVGGLGVNLTGATRVMLYDPDWNPSTDIQARERAWRIGQSQPVTIYRLITAGTIEEKVYHRQIYKNFLTNKVL-R------------------DPRQKR--------------FF-TARD-----------ISELFTLGPDGAG--------------------------GDTETARI-----------------------------------------------------------------------------FGS----ALDAQELAEAVRQQAEGGAGAAGGSGSGGRGAGGGGGAGGAGWL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKPAEEQDESRVLRDLFDGGAGLR-----------------------GLVDH------------------------SRIESANDP------ELITLHAEAQRVAARA----------AEALRRSRAA-CAVAPISTPT----WTGRHGHAGAPAGQQQAQQAQPQRRFGNGLAAGRRMGGGGGGGAGGGVAGGAPS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SASLLSQM-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RSRQQALQGAAAEASSRGVRGSGGGGSGGGSAAAAAVEPAEALAAEVVTFLDSRG---GVV-----------------------------------------------------------------------------------------------------GSEVLVEAFRQTVPPA--QMPLFKQVLRQVAGLRRRAAG--GEWVLKKEFR--------------------- [781] 'gnl|CMER|CMJ200C SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a' M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDVEKTARTGDSVDSGRDESRKED-------------DVLVKRSEQDQVSLTEDGLVASYPVGECSER---DNGGGDTGDCSVTDQGDLEAGTNSATQAVKRRRYEHLERLLKAATLYTSVLSEQIRQQQEQYRRRAHQQTSTPHNERSSKPGSTAGEKKLKTLVETA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DREQVDVRRTEAR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DAGALQ----LQEFTGGVLRDYQLAGLEWLVS-----LYEN-GI--NGILADEMGLGKTIQCIALICHLREMGVQG-----------------------------------PFLIVGPLTVLPNWISEFQRFA---PSVYALLYHGTK----------------------------------------------------SERQLLRKRH-----------LSTRNGASNMPVVITSYEIVMRDRVYLS----------------KYHWAYIIIDEGHRIKNMDCQLLRELQS-YTSANRLLITGTPLQNNLD-------------------ELWSLLHFLMP-DIFDSVE-------------------------------------LFREWFD----FGNDIAAGALERQQEDAIVSKLHMILRPFML------RRLKSDV--------------------------------------------------EKKM--PKKREIYLFAPLSALQ--------------------------------REYYMAIMQDR-----IHE--------------LLNAR----------------------------------------------------YGREYTRPLTLRNKFMQLRKVCCHPYLIAEPEENFTD-----------------------------------------------------------------------------------GAYPITDERLVHAAGKLALADRLL------------------------------PRL--------------------------------------RARGHKVLLYSQFTSMLNILEDYL--QLR------------GHKYARIDGS-VKFEDRIRQMEAFNSPDSEIFIFLMSTRAGGLGLNLQAADTVIFYDSDPNPQMDLQAMDRCHRIGQRKPVHVYRLVTPNSVEERMLNRAVEKRKLERLVV-T------------------RGH-----------------FYCDATH------------ASLQAPSAPSASNAGPSTTPDENRNPSQTV--------SSFDEALV-----------------------------------------------------------------------------QKL---SALEENLLDLDTIA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKEQVERILEELVNFVPAEA---------EYGNGGQITDADLDALMDR------------------------EEMIDQEAESHADA-ESLPLQESASTQASQT----------SRSCRRKRAA--MDANEAAPLNLSETTDADGIQTKTDAVVFRRQIAQGRGYQIFESGGESKLFQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [849] lcl|Ppa_CHR24_25_1_unnamed_protein_product M----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SREYQLQTQAAIKRRKQRN-------------DGVQAWHGKQRQRATRAEKLRFQAL---------------KSDDQEAYMRMVEESKNERLTTLLSRTDDLLQRLGAMVQKQKDAEPEDAFIVKKDHKPRGHPKDATRDLL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DNESVDAEAGSKK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RDLLEGQRQYNSAVHSIEEKVTVQ----PKMLQGGQLRAYQIEGLQWMLS-----LYNN-NL--NGILADEMGLGKTIQTIALLSYLLENKGVVG----------------------------------PHIIIAPKAVLPNWAHELSTWA---PGIQTVLYDGRA----------------------------------------------------EERRLLREEY---------------GGEGKFNVLVTHYDLIMRDKAFLK----------------KVKWNYMIVDEGHRLKNHDCMLSRTLTTGYHIRRRLLLTGTPIQNSLQ-------------------ELWSLLNFLLP-AIFNSSE-------------------------------------NFEDWFNAPFTDRSDVSLTEEEQ---LLVIRRLHQVIRPFLL------RRKKAEV--------------------------------------------------EKFL--PGKTQVILKCDMSAWQ--------------------------------RLYYKQIMESG----RVGLD-------------IGTGK-----------------------------------------------------------SRGLLNTAMQLRKCCNHPYLFLEGRDYEPE----------------------------------------------------------------------------------------NRDELIRSSGKFELLDRLL------------------------------PKL--------------------------------------AKTGHRVLLFSQMTRLMDILEDYL--EWH------------GFKFLRLDGT-TKTEERGTLLQKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVILFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEEILERAKSKMGIDAKVI-Q------------------AGLFNT--------------TS-TAQE-----------RREMLEEIMRRGSDVIGTDVPSEREINRLSARGDDEFDIFEEMDEER-----------------------------------------------------------------------------RQG---EGYKTRLMEEHEVPEWVFLNGPKGEDGNQEGDTDRKQVTGKRARKEVMYTDVLSDSQWMKAIEDGEDVGAAVKVQLTKRSKR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------REQQQAALEQEVAEMLEGDE-----------------------NSDDA------------------------EDETAADAEDESITEHTELQYEEAEVKTTEN----------NQAYRY?---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [829] ; END; BEGIN CODONS; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE=unord PolyTcount=MINSTEPS ; EXSET * UNTITLED = 1-2555 2557-2594 2616-2618 2631-2682 2693-2710 2732-2747 2776 2796-2901 2913-2918 2926-4854; END; BEGIN MacClade; Version 4.0 87; LastModified -1064338560; FileSettings editor '0' '0' '1' '1'; Singles 100; Editor 00011001111111100100010010 '1' '8' Geneva '10' '174' '1' all; EditorPosition '44' '6' '915' '1669'; TreeWindowPosition '46' '6' '981' '1630'; ListWindow Characters closed Geneva '9' '50' '10' '273' '366' 000; ListWindow Taxa closed Geneva '9' '50' '10' '273' '490' 100000000; ListWindow Trees closed Geneva '9' '50' '10' '276' '490' ; ListWindow TypeSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow ExSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow CharSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow TaxSets closed Geneva '9' '50' '10' '276' 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