#NEXUS [MacClade 4.08 registered to M. Hasebe, NIBB] BEGIN DATA; DIMENSIONS NTAX=22 NCHAR=2185; FORMAT DATATYPE=PROTEIN SYMBOLS = " 1 2 3 4" MISSING=? GAP=- ; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 1510 1520 1530 1540 1550 1560 1570 1580 1590 1600 1610 1620 1630 1640 1650 1660 1670 1680 1690 1700 1710 1720 1730 1740 1750 1760 1770 1780 1790 1800 1810 1820 1830 1840 1850 1860 1870 1880 1890 1900 1910 1920 1930 1940 1950 1960 1970 1980 1990 2000 2010 2020 2030 2040 2050 2060 2070 2080 2090 2100 2110 2120 2130 2140 2150 2160 2170 2180 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] 'gi|15233432|ref|NP 193822.1| MS5 (MALE-STERILE 5) [Arabidopsis thaliana] >gi|7268886|emb|CAB79090.1| putative protein [Arabidop' ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MCPCVERRAPPGVYYTPPPARTSDHVAAMPMTERRRPPYSCSSSSERRD----PFHIVHKVPSG---------------------------DSPYVRAKHAQ-------------------------------------------LIDKDP----------------------------------------------------------------NRAISLFWTAINAGD---------RVDSA--------LKDMAVVMKQLGRSDE-------GIEAIKSFRYLCS-----FESQDSIDNLLLELYK---KS-------------------------------GRIEEEAV------LLEHKLQTLEQGMGFGGRVSRAKRVQGKHV--------IMTIEQEKARIL--------------GNLGW-VHLQLHNYGIAEQHY-----------------------------------RFGFVTKIPNIDYCLVMRALGLERDKNKLCN-LAI------CLMRMSRIPE--------AKSLL-DDVRD-SPAESECGDEPFAKS--YDR-----------AVEMLAEIESKKPEADLSE--------KFYAGCSFVNRMKENI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------APGTANKNYSDVSSSPASVRPNSAGLYTQPRRCRLFEEE---------------------------------------------------------------------------------------------------TRGAARKLLFGKPQPFGSEQMKILERGEEEPMKRKKLDQNMIQYLHEFVKDTADGPKSESKKSWADIAEEEEAEEEEEERLQGELKTAEM--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [450] 'gi|3859112|gb|AAC72541.1| male sterility MS5 [Arabidopsis thaliana]' ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MCPCVERRAPPGVYYTPPPARTSDDVAAMPMTERRRPPYSCSSSSERRD----PFHIVHKVPSG---------------------------DSPYVRAKHAQ-------------------------------------------LIDKDP----------------------------------------------------------------NRAISLFWTAINAGD---------RVDSA--------LKDMAVVMKQLGRSDE-------GIEAIKSFRYLCS-----FESQDSIDNLLLELYK---KS-------------------------------GRIEEEAV------LLEHKLQTLEQGMGFGGRVSRAKRVQGKHV--------IMTIEQEKARIL--------------GNLGW-VHLQLHNYGIAEQHY-----------------------------------R----------------RALGLERDKNKLCN-LAI------CLMRMSRIPE--------AKSLL-DDVRD-SPAESECGDEPFAKS--YDR-----------AVEMLAEIESKKPEADLSE--------KFYAGCSFVNRMKENI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------APGTANKNYSDVSSSPASVRPNSAGLYTQPRRCRLFEEE---------------------------------------------------------------------------------------------------TRGAARKLLFGKPQPFGSEQMKILERGEEEPMKRKKLDQNMIQYLHEFVKDTADGPKSESKKSWADIAEEEEAEEEEEERLQGELKTAEM--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [434] 'gi|4028970|gb|AAC97106.1| pollenless3 [Arabidopsis thaliana]' ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MCPCVERRAPPGVYYTPPPARTSDHVAAMPMTERRRPPYSCSSSSERRD----PFHIVHKVPSG---------------------------DSPYVRAKHAQ-------------------------------------------LIDKDP----------------------------------------------------------------NRAISLFWTAINAGD---------RVDSA--------LKDMAVVMKQLGRSDE-------GIEAIKSFRYLCS-----FESQDSIDNLLLELYK---KS-------------------------------GRIEEEAV------LLEHKLQTLEQGMGFGGRVSRAKRVQGKHV--------IMTIEQEKARIL--------------GNLGW-VHLQLHNYGIAEQHY-----------------------------------R----------------RALGLERDKNKLCN-LAI------CLMRMSRIPE--------AKSLL-DDVRD-SPAESECGDEPFAKS--YDR-----------AVEMLAEIESKKPEADLSE--------KFYAGCSFVNRMKENI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------APGTANKNYSDVSSSPASVRPNSAGLYTQPRRCRLFEEE---------------------------------------------------------------------------------------------------TRGAARKLLFGKPQPFGSEQMKILERGEEEPMKRKKLDQNMIQYLHEFVKDTADGPKSESKKSWANFAEEEEAEEEEEERLQGELKTAEM--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [434] 'gi|15241471|ref|NP 199246.1| unknown protein [Arabidopsis thaliana] >gi|67633856|gb|AAY78852.1| male sterility MS5 family prote' -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRRRESRGAKGGGFLTPPPSWHTTRRVYIAMPISERKRSPLIENQESFRVRTG---------------------------DSPYVRAKHAQ-------------------------------------------LVSKDP----------------------------------------------------------------NRAISLFWAAINAGD---------RVDSA--------LKDMVVVLKQLNRFDE-------GIEAIKSFRYLCP-----FESQDSIDNLLLELYM---KS-------------------------------GRITEVAE------LLEHKLRTLEQDKHYGGRIKIAKRSHEEQN--------NKTIEQEKARIL--------------GNLAW-VHLQLHNYGIAEQYY-----------------------------------R----------------NALSLEPDNNKLCN-LAI------CLIRMERTHE--------AKSLL-EDVKQ--SLGNQWKNEPFCKS--FER-----------ATEMLAEREQATVADKPEDLLTSSFSDNFSSRCSGGMKGKKAL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTSTELGNIHKTNSHASSESVEQNSPGLTTQPRECKWVDEE---------------------------------------------------------------------------------------------VDQSKWDATIGASRKLRFWTVGPVRSLRFGNDYQKNLKSVGTAASTTNDELHQFISSDADCMTSKARKLCPELIKDKEDNEKESERIASESSSAYAKITDIGQRKVLHIDQRKVRHIGQRSV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [469] lcl|Smo_MS5_1_1_unnamed_protein_product -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IGTLDSVMGLPKELTHTLIRDSLSRNKEPNKMSKSAPCSPVKP------LVAAGKRPPSRAD----SFHVIHKVPLG---------------------------DSPYVRAKHVQ-------------------------------------------LVDKEP----------------------------------------------------------------DKAIALFWAAINAGD---------RVDSA--------LKDMAIVMKQQNRPEE-------AIEAIKSLRGRCS-----DQAQESLDNVLLDLYK---RC-------------------------------GRLDDQIA------LLKHKLQLIYAGLAFNGKRTKTARSQGKKF--------QVSIEQEATRLL--------------GNLGW-AYMQQSDFIAAEAVY-----------------------------------R----------------KALSMEPDNNKMCN-LGI------CLMKQGRVDE--------AKVLL-KSVMP-ASSDTRWGADSHLKS--YER-----------AQEMLAEMEQGQQHQPQH-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPSTGILRLVAHAPQAQSKLKQE--------------------------------------------------------------------------------------------------------IEIHQHRLQQQQQQTQPRSQQIPTYDSWDYEEEEEEEYNLVDDAD----ENANVNIIAQQQQDHHFLAAEALKKKLELLCVNA--NSNSGAITTNASSNSLKFSPSK----------------------------------------------------------------------------------------------------------------------PPRPSATARRSLSLESFDNLG---------------AAPPGNASLRPPPGISKSAASSPVKQQLFSGGDSDDR?--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [478] lcl|Smo_MS5_2_1_unnamed_protein_product -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IGTLDSVMGLPKELTHTLIRDSLSRNKEPNKMSKSAPCSPVKP------LVAAGKRPPSRAD----SFHVIHKVPLG---------------------------DSPYVRAKHVQ-------------------------------------------LVDKEP----------------------------------------------------------------DKAIALFWAAINAGD---------RVDSA--------LKDMAIVMKQQNRPEE-------AIEAIKSLRGRCS-----DQAQESLDNVLLDLYK---RC-------------------------------GRLDDQIA------LLKHKLQLIYAGLAFNGKRTKTARSQGKKF--------QVSIEQEATRLL--------------GNLGW-AYMQQSDFIAAEAVY-----------------------------------R----------------KALSMEPDNNKMCN-LGI------CLMKQGRVDE--------AKVLL-KSVMP-ASSDARWGADSHLKS--YER-----------AQEMLAEMEQGQQHQPQH-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPSTGILRLVAHAPQAQSKLKQE--------------------------------------------------------------------------------------------------------IEIHQHRLQQQQQQTQPRSQQMPTYDSWDYDEEEEEEYNLVDDAD----ENANVNIIAQQQEDHHFLAAEALKKKLELLCVNANSNSNSGAMATNTSSNSLKFSPSK----------------------------------------------------------------------------------------------------------------------PPRPSATARRSLSLESFDNLGVSFDRWTHESLVLVAAAPPGNASLRPPPGISKSAASSPVKQQLFSGGASDDR?--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [495] 'gi|50726663|dbj|BAD34381.1| putative pollenless3 [Oryza sativa (japonica cultivar-group)]' ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MMQQQQQQETWLAAAAAVGLRPTKSAPCSPIKPAESSASAAAAAAMLRTNSD----SFHVAHKVPVG---------------------------DTPYVRAKRVQ-------------------------------------------LVDKDP----------------------------------------------------------------EKAIALFWAAINAGD---------RVDSA--------LKDMAIVMKQQNRAEE-------AIEAIKSLRSRCS-----DQAQESLDNILLDLYK---RC-------------------------------GRLDDQIS------LLKHKLQLIHQGHAFNGKRTKTARSQGRKF--------QVTLEQEATRLL--------------GNLGW-ALMQKENYTEAEGAY-----------------------------------R----------------RALLIGPDNNKMCN-LGI------CLMKQGRVLE--------AKDVL-KQVRP-AGVDGLRGADSHLKA--YER-----------AQEMLRDLEAKLVGRRLPRAGDQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVDKSWLFDALLLG---SSSSIWQPQPCIDHMLPPPPPPPRD-------QFADENAAAAAANKKAAAAALQPNILRVDAQ---------------------------------------------------------------------------PFYSLRMPPLATKPQNIQQKPPTPQPQVHDPMGNLKRTRSGNAMDKAAAAAAGPVEKEPINDENSGRRKSLSAEE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RWPELPDHSAFDEALVAAVLAPVLDDSAAAAAERNDNCCKPAPPAGCDTSPAMKEKIGKRLRIFQDITQTLNTF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [515] lcl|Ppa_MS5_1_1_unnamed_protein_product -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ETDSSTSIIPIHNPEERHIEAITISWVKLPAVSCCQHCEYFSSSLDPRKQLNCANSAVAISAAYLSEAFQLQECEIAQRHCSACTESAVSDSQIRMMWGEQYLQPAAGHMPYGGRVTKSAPCSPVKP---------PSKRLSARAD----SFHVVHKVPVG---------------------------DTPYVKAKHVQ-------------------------------------------LVDKDP----------------------------------------------------------------DRAIALFWAAINAGD---------RVDSA--------LKDMAIVMKQQNRPQE-------AIEAIKSLRSRCS-----DQAQESLDNVLLDLYK---RC-------------------------------GRLDDQID------LLKHKLHLIHQGMAFNGKRTKTARSQGKKF--------QVSIEQEATRLLVRMSCPLVVVVVVQGNLGW-AHMQQSNFVAAEAVY-----------RDIGEVRQEMMYALTVVRACVPVGR----------------KALSIEPDNNKVCN-LGI------CLMKQGRLEE--------AKAML-QSVT--RCNDNRWASDSHLKS--YDR-----------AQEMLQDLEASMGAKG-HEKAVED--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L--RSFAIPGFEGGYDLQHSSLWQPQPAMPRQPRRMARSNLE-------QQFSQSVEPPMSGALLATAGFGPSQQKSGYQ------------------------------------------------------------------------------------------------APATPRGQAHAASQQGDETWFQ----SGVRAGWSDEELDHSSLEVEDAL----NVQGEQSVQGFLGSSKQPMNW-HAETLRQRLETVSVLG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TRS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [574] lcl|Ppa_MS5_8_1_unnamed_protein_product -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTRAPCSPMKP--------TSKVLPISRGD----PFHVVHKVPVG---------------------------DSPYVKAKHVQ-------------------------------------------LVDKDP----------------------------------------------------------------DRAIALFWAAINSGD---------RVDSA--------LKDMAIVMRQQNRPQE-------AIEAIKSLRSRCS-----DQAQESLDNVLLDLYK---RC-------------------------------GRLDDQID------LLRHKLHLIHQGLAFNGKRTKTARSQGKKF--------QVSVKQEATRLL--------------GNLGW-AYMQQLNFVAAEAVY-----------------------------------R----------------KALSIETDINKVCN-LGI------CLMKQGRLEE--------AKAAL-QRVTV-AYSGIRWASDSQLKS--YER-----------AQDLLKELGSSIGLKGSHDDILQQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L--SSFTIPG------------CNSDPAMPRQPRRASRSGLE-------QVSRSNIDPSMSGAFVATSGFGPAHHT-----------------------------------------------------------------------------------------------------------RHDMTGSYRTQSWLQDGSCSGSSSGWDEDDFDDASLDEFSDGSDFQGYPQESISSNPIASENEEMQWHVETSLREWLEKAIALKNGLYERQLGME-----?---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [418] lcl|Ppa_MS5_9_1_unnamed_protein_product -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------?C-------------------------------------WTSSSLDPRKQLNCANSAVANSAAYLSEAFQLQVCETAQQHCSACTGSAVSDSQIRMMWGEQYPQPAVGHMLYGVRVTKSAPCSPVKP---------PSKRLSARAD----SFHVVHKVPVG---------------------------DTPYVKAKHVQ-------------------------------------------LVDKDP----------------------------------------------------------------DRAIALFWAAINAGD---------RVDSA--------LKDMAIVMKQQNRPQE-------AIEAIKSLRSRCS-----DQAQESLDNVLLDLYK---RC-------------------------------GRLDDQID------LLKHKLHLIHQGMAFNGKRTKTARSQGKKF--------QVSIEQEATRLLVRMSCPLVVVVEVQGNLGW-ACMQQSNFVAAEAVY-----------------------------------R----------------KALSIEPDNNKVCN-LGI------CLMKQGRLEE--------AKAML-QSVT--RCNDNRWASDSHLKS--YDR-----------AQEMLQELEASMGAEG-HEKAVEE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L--RSFAIPGFEGGYDLQHSSFWQPQPAMPRQPRRMARSNLE-------QQFSQSVEPSMSGALLATAGFGPSQQKSGYQ------------------------------------------------------------------------------------------------APATPRVRAHAAKQQGDETWFQ----SG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [452] 'gi|15230439|ref|NP 190696.1| unknown protein [Arabidopsis thaliana] >gi|6562280|emb|CAB62650.1| MS5-like protein [Arabidopsis t' -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MMRDVFRPTKSAPCSPAKPLGIS----------RTQSE----SFHAIHKVPVG---------------------------DSPYVRAKNVQ-------------------------------------------LVEKDP----------------------------------------------------------------ERAIPLFWKAINAGD---------RVDSA--------LKDMAIVMKQQNRAEE-------AIEAIKSLRVRCS-----DQAQESLDNILLDLYK---RC-------------------------------GRLDDQIG------LLKHKLFLIQKGLAFNGKRTKTARSQGKKF--------QVSVEQEATRLL--------------GNLGW-ALMQRDNFVEAEDAY-----------------------------------R----------------RALSIAPDNNKMCN-LGI------CLMKQGRIDE--------AKETL-RRVKP-AVVDGPRGVDSHLKA--YER-----------AQQMLNDLGSEMMRRGGDDKVEQR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------R--LFDAIFG--------SSSIWQPQPCSEQTVKAKPKPGLSNGDGYGDENVKMSVNPVVVNPLRVDAKPFFSSKLV----------------------------------------------------------------------------------------------------------ISNNEKLKRTRSSSQGMGMLSGIGGDHEGETNTSTRRRLSMEKKATECG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPDNKDFEDAIMAAVLGTETKVDKKRLKVF---------QDITLCLNQSL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [430] 'gi|9758884|dbj|BAB09438.1| unnamed protein product [Arabidopsis thaliana]' ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNRDEILSKFISYSNKQEKKMERSLKKTKNNYNNSIKSNLMKDDE----LFHVIHKVPCG---------------------------DTPYVRAKHAQ-------------------------------------------LIEKNP----------------------------------------------------------------EMAIVWFWKAINTGD---------RVDSA--------LKDMAVVMKQLDRSEE-------AIEAIKSFRPRCS-----KNSQDSLDNVLIDLYK---KC-------------------------------GRMEEQVE------LLKRKLRQIYQGEAFNGKPTKTARSHGKKF--------QVTVQQEISRLL--------------GNLGW-AYMQQAKYLSAEAVY-----------------------------------R----------------KAQMVEPDANKSCN-LAM------CLIKQGRFEE--------GRLVL-DDVLE-----YRVLGADDCRT--RQR-----------AEELLSELESSLPRMRDAEMEDVLGN-----ILDDDFVLGLEEMTS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSFKSKRLPIFEQISSFRNTLVC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [326] 'gi|30695554|ref|NP 199696.2| unknown protein [Arabidopsis thaliana] >gi|28950875|gb|AAO63361.1| At5g48850 [Arabidopsis thaliana' ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MERSLKKTKNNYNNSIKSNLMKDDE----LFHVIHKVPCG---------------------------DTPYVRAKHAQ-------------------------------------------LIEKNP----------------------------------------------------------------EMAIVWFWKAINTGD---------RVDSA--------LKDMAVVMKQLDRSEE-------AIEAIKSFRPRCS-----KNSQDSLDNVLIDLYK---KC-------------------------------GRMEEQVE------LLKRKLRQIYQGEAFNGKPTKTARSHGKKF--------QVTVQQEISRLL--------------GNLGW-AYMQQAKYLSAEAVY-----------------------------------R----------------KAQMVEPDANKSCN-LAM------CLIKQGRFEE--------GRLVL-DDVLE-----YRVLGADDCRT--RQR-----------AEELLSELESSLPRMRDAEMEDVLGN-----ILDDDFVLGLEEMTS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSFKSKRLPIFEQISSFRNTLVC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [306] lcl|Smo_MS5_3_1_unnamed_protein_product -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MWIDRYNLDS-----------------------------------ASFQE----SFHVLHKIPVG---------------------------DTPYVKAKHVQ-------------------------------------------LVDKDP----------------------------------------------------------------DRAIALFWAAINAGD---------RVDSA--------LKDMAIVMKQQNRPEE-------AIEAIKSLRDRCT-----DQAQEALDNVLLDLYK---RC-------------------------------GRLDDQIA------LLKRKLHLIHEGLAFNGKRTKTARSQGRKF--------QVSIEQEASRLL--------------GNLGW-AYMQQSNYIAAEAVY-----------------------------------R----------------KALSIEPDSNKVCN-LGI------CFQKQGKLHD--------ARVTL-ESVAP-PAWN---ASPSQRKT--YER-----------AQEVLVELREMKSVQRKSAKATTSSVELNV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DESSWNPLS----------------------SPARTSLKHHLPEILAATSGFSDDGDDNETS------------------------------------------------------------------------------------------------EAKISRKRSYETENEQHETIWNPPSSSEQES--------------------------------------------------------RLPLTSDWTNKAYARQSPASSLEKPKK-----------------------------------------------------------------------------------------------------------ALDQSVTWKDVLLQDDSAAAARRSLASSFDSADDALLRDLEETTARDRELQSLEECDQGWTGRRLKVFEEMTLPGLLL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [439] 'gi|3859116|gb|AAC72543.1| unknown [Oryza sativa]' -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HPRISLSLSLRRAPPPPLLLPPMASSSKRRGGAGGGGAEKKD----LFHVVHKVPAG---------------------------NSPYVRAKHLQ-------------------------------------------LVDKDP----------------------------------------------------------------ETAIVWFWKAINSRD---------KVDSA--------LKDMAVVMKQQDRAKE-------AIEAIRSFRHLCS-----RQAQESLDNLLIDLYK---KC-------------------------------GKVDEQID------LLKQKLKMIYLGEAFNGKATKTARSHGKKF--------QVSIQQETSRIL--------------GNLGW-AYMQQSNYSAAELVY-----------------------------------R----------------KAQSIEPDANRACN-LGL------CLIKQSRHDE--------ARQVL-HDVVL-----RRISGSEDDKV--VAR-----------AKQLLHELEPVTHVTSPNNAGLSVSE-----EIMERLDLVLNEW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPFRSRRLPVFEEIATLRDQIAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [321] 'gi|52353366|gb|AAU43934.1| unknown protein [Oryza sativa (japonica cultivar-group)]' -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MASSSKRRGGAGGGGAEKKD----LFHVVHKVPAG---------------------------DSPYVRAKHLQ-------------------------------------------LVDKDP----------------------------------------------------------------ETAIVWFWKAINSRD---------KVDSA--------LKDMAVVMKQQDRAKE-------AIEAIRSFRHLCS-----RQAQESLDNLLIDLYK---KC-------------------------------GKVDEQID------LLKQKLKMIYLGEAFNGKATKTARSHGKKF--------QVSIQQETSRIL--------------GNLGW-AYMQQSNYSAAELVY-----------------------------------R----------------KAQSIEPDANRACN-LGL------CLIKQSRHDE--------ARQVL-HDVVL-----RRISGSEDDKV--VAR-----------AKQLLHELEPVTHVTSPNNAGLSVSE-----EIMERLDLVLNEW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPFRSRRLPVFEEIATLRDQIAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [299] 'gi|7211988|gb|AAF40459.1| Strong similarity to the beta-9 tubulin gene (178 gene product) gb|AF060248. [Arabidopsis thaliana]' ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGTDRLTIMNQDENLSRFLLLLPQYNYIFLHTPLERERKVLPDLGEIKKVSSFRNRDTKFAMMMMIQRRGG------ERQDSSAAAYNVVHKLPHG---------------------------DSPYVRAKHVQ-------------------------------------------LVEKDA----------------------------------------------------------------EAAIELFWIAIKARD---------RVDSA--------LKDMALLMKQQNRAEE-------AIDAIQSFRDLCS-----RQAQESLDNVLIDLYK---KC-------------------------------GRIEEQVE------LLKQKLWMIYQGEAFNGKPTKTARSHGKKF--------QVTVEKETSRIL--------------GNLGW-AYMQLMDYTAAEAVY-----------------------------------R----------------KAQLIEPDANKACN-LCT------CLIKQGKHDE--------ARSILFRDVLM-----ENKEGSGDPRL--MAR-----------VQELLSELKPQEEEAAASVSVECEVG-----IDEIAVVEGLDEF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKEWRRPYRTRRLPIFEEILPLRDQLAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [364] 'gi|30678993|ref|NP 171969.2| unknown protein [Arabidopsis thaliana] >gi|22655080|gb|AAM98131.1| unknown protein [Arabidopsis th' -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MMMMIQRRGG------ERQDSSAAAYNVVHKLPHG---------------------------DSPYVRAKHVQ-------------------------------------------LVEKDA----------------------------------------------------------------EAAIELFWIAIKARD---------RVDSA--------LKDMALLMKQQNRAEE-------AIDAIQSFRDLCS-----RQAQESLDNVLIDLYK---KC-------------------------------GRIEEQVE------LLKQKLWMIYQGEAFNGKPTKTARSHGKKF--------QVTVEKETSRIL--------------GNLGW-AYMQLMDYTAAEAVY-----------------------------------R----------------KAQLIEPDANKACN-LCT------CLIKQGKHDE--------ARSILFRDVLM-----ENKEGSGDPRL--MAR-----------VQELLSELKPQEEEAAASVSVECEVG-----IDEIAVVEGLDEF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKEWRRPYRTRRLPIFEEILPLRDQLAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [303] 'gi|50940805|ref|XP 479930.1| putative pollenless3 [Oryza sativa (japonica cultivar-group)] >gi|29467532|dbj|BAC66721.1| putativ' -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MPSGGRRLPPWTSPRGAAPRWSPCTPAGADGSGRAAHATPPASGGCSSHVTPPASGGGGCYGYRVTPPTSGGCSRPPRAPLSSVDSPYVRAKQAQ-------------------------------------------VIEKDP----------------------------------------------------------------NKAVPLFWAAINSGD---------RIESA--------LKDMATVLKQANRAEE-------AIEAIRSFRDRCP-----NEAQESLDNILLDLYK---KC-------------------------------GRTKEQIE------MLTLKLRIVDEELASGRWKTKLSKSHGRVV--------YLSLRDEKARLL--------------GNLAW-AHMQSENYDEAEMLY-----------------------------------R----------------QALAIEADYNKECN-LAI------CLIKTGKVAE--------AKYLL-QSIPD------NCSDESHVRS--LAR-----------AREMLMELESPTLHSPITQMKSKESL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IWLAIDAENLGHLQPQVSSTALTQLKSEEPHISVAADAEKQEDCNSQVFPSPITQMKREEPESLIATSGENNEKCLNEYQDLSRLFNDAATPQSLLEKLRKRLVKEDTLNISIQHQVQIPSFVECLPNSGGSTDAGENTRPEGKALVNGVRKTWADMVEEDERQLGDVSSTIGMDTTKRNVSCKHANEEMYRTPSFSQESSALKRSSVDDHPQSSSADSWRHSDSKISTDENVNMKFVRTAPQWRQQKVQDYSNRVSQRLDTSHLSDRAEGTEQPPWRSSTAQRSLFPDWKSKCERYGHGYVPFGDNEHFQGSSHFEATNRWPKNARPWRPQNRLWVFQEITNEINQKQTRALWLTIYTTLLFGTTALDDTAWFLVECFHLLAGHLLLHDGLQDLSVAPPSGQFAEMAMQMHPATGLSTHWSQVDSPPLKLREGANMVVLLQDQLLPMAFSIANVCEDCIMAYMSASASSVLFYTSCLDMQQLPYTGHVITINKSEAATI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [815] lcl|Ppa_MS5_2_1_unnamed_protein_product ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MCISKSTPVSPTKP-----ASKPIAYKPAARND----AFHIVHNVPMG---------------------------NSPYVKAKHVQ-------------------------------------------LVDKDP----------------------------------------------------------------DRAIALFWEAINSGD---------RVDSA--------LKDMAIVMKQKSRPHE-------AIEVIKSLRSRCS-----DRAQESLDNVLLDLYK-------------------------------------------------------LYLIHQGIAFNGKRRKIARSQGKKF--------QVSIEQQATRLL--------------GNLGW-AYMQQSKFLAAEAVY-----------------------------------R----------------KALLIESDVNKVCN-LGI------CLMKQGRLEE--------AKSIL-RSVIL-PCNDRRWTSDSHLKS--FER-----------AQEMMEKLESSVAIKGNSDDIFKQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------V--NSFAIPGYVTDAIVHDSISRQPQPGLRLHPCRITKSALE------SKQVQCNVDPSISGPLVATSGFGLAQSDA----------------------------------------------------------------------------------------------------------TPDMTGNFRRQAWLQGGSCSGTSGGWIEDDLYYTSPDESSDGSDIHEWPLDF-KYYLNDTENDETQFSVQNNLRMRSESAIDLKRELCNSQL?------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [419] lcl|Smo_MS5_4_1_unnamed_protein_product -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MWIDRYNLDS-----------------------------------ASFQE----SFHVLHKIPVG---------------------------DTPYVKAKHVQ-------------------------------------------LVDKDP----------------------------------------------------------------DRAIALFWAAINAGD---------RVDSA--------LKDMAIVMKQQNRPEE-------AIEAIKSLRDRCT-----DQAQEALDNVLLDLYK---RC-------------------------------GRLDDQIA------LLKRKLHLIHEGLAFNGERTKTARSRDASF--------SIDRARGVSLA?------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [160] lcl|Ppa_MS5_3_1_unnamed_protein_product ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------?AHQSGRRGTSVSCIIQTTYEV--------------------------------------FVP-------------------------------------------LVDKDP----------------------------------------------------------------DRAISLFWTAVNVGD---------RVDSA--------LKDMAIVMKQQNRPQE-------AIEAIKSLRNRCS-----DEAQESLDNVLLGLYKAVQRC-------------------------------GRLDDQID------VLTHKLHLVHQGIV---KRSKTARSQGKKF--------QVLISQEASSIL--------------GNLGW-AYMQQSNFVGAEAAY-----------------------------------R----------------PCINSDHRSH-------------------------------------------------------------FPG-----------RQI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [185] ; END; BEGIN CODONS; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE=unord PolyTcount=MINSTEPS ; EXSET * UNTITLED = 1-457 464-527 543-551 557-564 581-587 601-605 622-676 686-688 702-709 721-2185; END; BEGIN MacClade; Version 4.0 87; LastModified -1063229043; FileSettings editor '0' '0' '1' '1'; Singles 100; Editor 00011001111111100100010010 '1' '8' Geneva '9' '490' '1' all; EditorPosition '96' '15' '915' '1521'; TreeWindowPosition '46' '6' '985' '1630'; ListWindow Characters closed Geneva '9' '50' '10' '273' '366' 000; ListWindow Taxa closed Geneva '9' '50' '10' '145' '490' 100000000; ListWindow Trees closed Geneva '9' '50' '10' '276' '490' ; ListWindow TypeSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow ExSets closed Geneva '9' '50' '25' '129' '181' ; ListWindow CharSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow TaxSets closed Geneva '9' '50' '10' '276' '490' ; 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