query gene name (PAL1.200pt1): global / partial tree
File name:
174 aa residues 138 OTU included.
Results of partial trees included / Partial tree including Ppa.
Assemble Job Id:
Tree job id: MfxiPO
BP values out of 100
Analyzed by ku-bo@nibb.ac.jp
Date: Tue Dec 26 10:29:42 JST 2006
AT2G37040 = NP_181241 P35510 AAK76593 AAL85094 AAM15324 AAO29949 AAP59438 PAL1; phenylalanine ammonia-lyase/PAL1_ARATH Phenylalanine ammonia-lyase 1/putative phenylalanine ammonia lyase PAL1 /putative phenylalanine ammonia lyase PAL1 /phenylalanine
AAC18870 Arabidopsis thaliana phenylalanine ammonia lyase
98
AT3G53260 = NP_190894 P45724 AAC18871 CAB64229 AAK32895 AAM12956 AAM91425 AAN15354 AAP59439 PAL2; phenylalanine ammonia-lyase/PAL2_ARATH Phenylalanine ammonia-lyase 2/phenylalanine ammonia lyase /phenylalanine ammonia-lyase /AT3g53260/T4D2_190 /phen
AAX22053 Brassica napus AAX22054 phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
AAX22055 Brassica napus AAX22056 phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
505389
AAR19393 Stellaria longipes phenylalanine ammonia-lyase
BAB19128 Dianthus caryophyllus phenylalanine ammonia-lyase
CAC81822 Beta vulgaris CAH17686 phenylalanine ammonia-lyase/phenylalanine ammonia lyase
439021
AAK15640 Agastache rugosa phenylalanine ammonia-lyase
O23924 Digitalis lanata CAA05251 PALY_DIGLA Phenylalanine ammonia-lyase/phenylalanine ammonia lyase
39
AAK84225 Rehmannia glutinosa phenylalanine ammonia-lyase
Q42667 Citrus limon AAB67733 PALY_CITLI Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
80
O04058 Helianthus annuus CAA73065 PALY_HELAN Phenylalanine ammonia-lyase/phenylalanine ammonia lyase
AAL55242 Lactuca sativa AAO13347 phenylalanine ammonia-lyase/phenylalanine ammonia-lyase2; PAL
89
BAA95629 Catharanthus roseus phenylalanine ammonia lyase
30
AT5G04230 = NP_196043 P45725 S52992 AAA69905 CAC05505 AAS18574 PAL3 (PHENYL ALANINE AMMONIA-LYASE 3); phenylalanine ammonia-lyase/PAL3_ARATH Phenylalanine ammonia-lyase 3/S52992 phenylalanine ammonia-lyase (EC 4.3.1.5) 3 - Arabidopsis thaliana /PAL3
AT3G10340 = NP_187645 Q9SS45 AAF02809 AAM20508 AAN15571 AAP59440 ammonia ligase/ammonia-lyase /PAL4_ARATH Phenylalanine ammonia-lyase 4/putative phenylalanine ammonia-lyase /putative phenylalanine ammonia-lyase /putative phenylalanine ammonia-lyase
64
AAG22549 Rubus idaeus phenylalanine ammonia-lyase 1
Q9M568 Rubus idaeus AAF40223 PAL1_RUBID Phenylalanine ammonia-lyase 1 (RiPAL1)/phenylalanine ammonia-lyase 1
100
O49836 Lithospermum erythrorhizon BAA24929 PAL2_LITER Phenylalanine ammonia-lyase 2 (PAL-2)/phenylalanine ammonia-lyase
O49835 Lithospermum erythrorhizon BAA24928 PAL1_LITER Phenylalanine ammonia-lyase 1 (PAL-1)/phenylalanine ammonia-lyase
5712
AAC33966 Capsicum chinense phenylalanine ammonia-lyase
P31425 Solanum tuberosum P31426 PAL1_SOLTU Phenylalanine ammonia-lyase 1/PAL2_SOLTU Phenylalanine ammonia-lyase 2
P35511 Lycopersicon esculentum AAA34179 PAL1_LYCES Phenylalanine ammonia-lyase (PAL)/phenylalanine ammonia lyase
AAV98199 Petunia x hybrida phenylalanine ammonialyase 1
A44133 Lycopersicon esculentum A44133 phenylalanine ammonia-lyase (EC 4.3.1.5) - tomato
P26600 Lycopersicon esculentum AAA34176 PAL5_LYCES Phenylalanine ammonia-lyase (PAL)/phenylalanine ammonia-lyase
82583912
P35513 Nicotiana tabacum BAA22947 BAA22963 PAL2_TOBAC Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase /phenylalanine ammonia-lyase
P45733 Nicotiana tabacum CAA55075 PAL3_TOBAC Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
74
Q42858 Ipomoea batatas BAA11459 PAL2_IPOBA Phenylalanine ammonia-lyase/Phenylalanine Ammonia-Lyase
P14166 Ipomoea batatas AAA33389 PAL1_IPOBA Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
AAG49585 Ipomoea nil phenylalanine ammonia-lyase
944411
P25872 Nicotiana tabacum AAA34122 BAA22948 PAL1_TOBAC Phenylalanine ammonia-lyase/phenylalanine ammonia lyase /phenylalanine ammonia-lyase
2528720
AAX18752 Styphnolobium japonicum phenylalanine ammonia-lyase
AAX18624 Juglans regia phenylalanine ammonia-lyase
Q9SMK9 Cicer arietinum CAB60719 PAL2_CICAR Phenylalanine ammonia-lyase 2/phenylalanine ammonia-lyase
4438
AAR31107 Quercus suber phenylalanine ammonia-lyase
12
S60043 Populus sieboldii x Populus grandidentata S60043 phenylalanine ammonia-lyase (EC 4.3.1.5) 4 - Japanese aspen x large-toothed aspen (fragment)
Q40910 Populus kitakamiensis BAA07861 PAL4_POPKI Phenylalanine ammonia-lyase G4/phenylalanine ammonia-lyase
AAN52280 Populus tremuloides phenylalanine ammonia-lyase
7884
P45731 Populus kitakamiensis BAA06337 PAL1_POPKI Phenylalanine ammonia-lyase G1/phenylalanine ammonia-lyase
Q43052 Populus kitakamiensis S60042 Populus sieboldii x Populus grandidentata BAA07860 Populus kitakamiensis PAL2_POPKI Phenylalanine ammonia-lyase G2B/S60042 phenylalanine ammonia-lyase (EC 4.3.1.5) 2b - Japanese aspen x large-toothed aspen /ph
45
AAQ74878 Populus trichocarpa x Populus deltoides phenylalanine ammonia lyase
69491
AAY82485 Ulmus americana phenylalanine ammonia-lyase
AAY82486 Ulmus pumila phenylalanine ammonia-lyase
95
AAD45384 Vigna unguiculata phenylalanine ammonia-lyase
AAK60274 Manihot esculenta AAK62030 phenylalanine ammonia-lyase 1/phenylalanine ammonia-lyase 1
161852
AAN32866 Coffea canephora AAN32867 AAZ04477 phenylalanine ammonia-lyase 1/phenylalanine ammonia-lyase 2 /phenylalanine ammonia-lyase
1
P45726 Camellia sinensis BAA05643 AAU08174 PALY_CAMSI Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase /phenylalanine ammonia-lyase
AAF40224 Rubus idaeus AAG22550 phenylalanine ammonia-lyase 2/phenylalanine ammonia-lyase 2
2
AAX18626 Pittosporum tobira phenylalanine ammonia-lyase
AAX18625 Nerium oleander phenylalanine ammonia-lyase
O64963 Prunus avium AAC78457 PAL1_PRUAV Phenylalanine ammonia-lyase 1/phenylalanine ammonia-lyase; PAL1
2595
CAA53733 Cucumis melo phenylanaline ammonia-lyase
AAZ79663 Fagus sylvatica putative phenylalanine ammonia-lyase
P27990 Medicago sativa CAA41169 PALY_MEDSA Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
P45732 Stylosanthes humilis AAA99500 PALY_STYHU Phenylalanine ammonia-lyase/phenylalanine ammonia lyase
712
AAX84839 Astragalus membranaceus var. mongholicus phenylalanine ammonia-lyase
BAE71252 Trifolium pratense putative phenylalanine ammonia lyase
Q01861 Pisum sativum Q04593 BAA00885 BAA00886 BAA00887 PAL1_PEA Phenylalanine ammonia-lyase 1/PAL2_PEA Phenylalanine ammonia-lyase 2 /phenylalanine ammonia-lyase /phenylalanine ammonia-lyase /phenylalanine ammonia-lyase
2001451A Pisum sativum 2001451A Phe ammonia lyase
P45734 Trifolium subterraneum 2006271A AAA17993 PALY_TRISU Phenylalanine ammonia-lyase/2006271A Phe ammonia lyase/phenylalanine ammonia-lyase
357319140
A24727 Phaseolus vulgaris P07218 1111326A AAA33770 A24727 phenylalanine ammonia-lyase (EC 4.3.1.5) - kidney bean (fragment)/PAL1_PHAVU Phenylalanine ammonia-lyase class I/1111326A ammonia lyase,Phe/phenylalanine ammonia-lyase (EC 4.3.1.5)
P27991 Glycine max CAA37129 PAL1_SOYBN Phenylalanine ammonia-lyase 1/phenylalanine ammonia-lyase
73
P19142 Phaseolus vulgaris 1807329A PAL2_PHAVU Phenylalanine ammonia-lyase class II/1807329A Phe ammonia lyase
AAK60275 Manihot esculenta phenylalanine ammonia-lyase 2
3911
BAA21643 Populus kitakamiensis AAN52279 Populus tremuloides phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
JQ2265 Populus trichocarpa x Populus deltoides P45730 Populus trichocarpa AAA33805 Populus trichocarpa x Populus deltoides JQ2265 phenylalanine ammonia-lyase (EC 4.3.1.5) - western balsam poplar x cottonwood/PALY_POPTR Phenylalanine ammonia-ly
8166001
CAB42794 Citrus clementina x Citrus reticulata phenylalanine-ammonia lyase
CAB42793 Citrus clementina x Citrus reticulata phenylalanine-ammonia lyase
581
AAW78932 Rhodiola sachalinensis phenylalanine-ammonia lyase
O23865 Daucus carota BAA23367 PAL1_DAUCA Phenylalanine ammonia-lyase 1/phenylalanine ammonia-lyase
P45728 Petroselinum crispum CAA57056 PAL2_PETCR Phenylalanine ammonia-lyase 2/phenylalanine ammonia-lyase 2
P45729 Petroselinum crispum CAA57057 PAL3_PETCR Phenylalanine ammonia-lyase 3/phenylalanine ammonia-lyase 3
41
1W27 Petroselinum crispum 1W27 P24481 CAA34715 CAA68938 BAC56977 Daucus carota B Chain B, Phenylalanine Ammonia-Lyase (Pal) From Petroselinum Crispum/A Chain A, Phenylalanine Ammonia-Lyase (Pal) From Petroselinum Crispum/PAL1_PETCR Phenylalanine amm
6570281142
P45727 Persea americana AAA51873 PALY_PERAE Phenylalanine ammonia-lyase/phenylalanine ammonia lyase
31
AAP34199 Phalaenopsis x Doritaenopsis hybrid cultivar phenylalanine ammonia-lyase
AAS48415 Allium cepa phenylalanine lyase
Q42609 Bromheadia finlaysoniana CAA68256 PALY_BROFI Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
386833
CAA89006 Hordeum vulgare subsp. vulgare phenylalanine ammonia-lyase
XP_473192 Oryza sativa (japonica cultivar-group) AAO72666 CAE05619 CAE05454 OSJNBa0073E02.14/phenylalanine ammonia-lyase /OSJNBb0061C13.1 /OSJNBa0073E02.14
54
AAL40137 Zea mays phenylalanine ammonia-lyase
AAX97448 Bambusa ventricosa putative phenylalanine ammonia-lyase
S06475 Oryza sativa P14717 CAA34226 Oryza sativa (japonica cultivar-group) S06475 phenylalanine ammonia-lyase (EC 4.3.1.5) - rice/PAL1_ORYSA Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
XP_466843 Oryza sativa (japonica cultivar-group) BAD23794 BAD23149 putative phenylalanine ammonia-lyase/putative phenylalanine ammonia-lyase /putative phenylalanine ammonia-lyase
656052100
AAG02280 Triticum aestivum inducible phenylalanine ammonia-lyase
XP_466845 Oryza sativa (japonica cultivar-group) BAD23151 putative phenylalanine ammonia-lyase/putative phenylalanine ammonia-lyase
23
AAR24505 Dendrocalamopsis oldhamii phenylalanine ammonia-lyase
XP_466846 Oryza sativa (japonica cultivar-group) BAD23152 putative phenylalanine ammonia-lyase/putative phenylalanine ammonia-lyase
XP_475254 Oryza sativa (japonica cultivar-group) AAS90660 AAV25018 putative phenylalanine ammonia-lyase (EC 4.3.1.5)/putative phenylalanine ammonia-lyase (EC 4.3.1.5) /putative phenylalanine ammonia-lyase
P53443 Oryza sativa CAA61198 Oryza sativa (indica cultivar-group) PAL2_ORYSA Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
XP_466849 Oryza sativa (japonica cultivar-group) BAD23155 putative phenylalanine ammonia-lyase/putative phenylalanine ammonia-lyase
7436
Q43210 Triticum aestivum CAA68036 PALY_WHEAT Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
CAA89005 Hordeum vulgare subsp. vulgare phenylalanine ammonia-lyase
CAA89007 Hordeum vulgare subsp. vulgare phenylalanine ammonia-lyase
38
XP_473196 Oryza sativa (japonica cultivar-group) CAE05623 CAE05458 OSJNBa0073E02.18/OSJNBb0061C13.5 /OSJNBa0073E02.18
2746161339541520
AAW80644 Pteridium aquilinum phenylalanine ammonia lyase
AAW80635 Huperzia lucidula phenylalanine ammonia lyase
AAW80636 Lycopodium tristachyum phenylalanine ammonia lyase
6750
AAW80641 Botrychium virginianum phenylalanine ammonia lyase
AAW80640 Psilotum nudum phenylalanine ammonia lyase
97
AAP85250 Pinus pinaster AAP85251 phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
AAT65681 Ginkgo biloba phenylalanine ammonia-lyase
AAT66434 Pinus pinaster phenylalanine ammonia lyase
AAL74317 Pinus sylvestris AAL74318 AAL74319 AAL74320 AAL74321 AAL74322 AAL74323 AAL74324 AAL74325 AAL74326 AAL74327 AAL74328 AAL74329 AAL74330 AAL74332 AAL74333 AAL74334 AAL74335 AAL74336 phenylalanine ammonia-lyase/phenylalanine ammonia-lyase /pheny
AAL74331 Pinus sylvestris phenylalanine ammonia-lyase
P52777 Pinus taeda AAA84889 PALY_PINTA Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
6996947794
AAW51924 Rhizophora mangle phenylalanine ammonia-lyase
Ppa_PAL1_14_1
Ppa_PAL1_13_1 Ppa_PAL1_2_1
Ppa_PAL1_7_1 Ppa_PAL1_8_1
Ppa_PAL1_3_1
Ppa_PAL1_10_1
17
Ppa_PAL1_11_1
2125
Ppa_PAL1_5_1
43100
Ppa_PAL1_9_1
Ppa_PAL1_1_1
Ppa_PAL1_6_1
80375250
AAW80645 Pellia epiphylla phenylalanine ammonia lyase
AAW80643 Blechnum spicant phenylalanine ammonia lyase
AAW80639 Equisetum arvense phenylalanine ammonia lyase
AAW80642 Ophioglossum reticulatum phenylalanine ammonia lyase
345099
AAW80637 Isoetes lacustris phenylalanine ammonia lyase
271
AAW80638 Selaginella kraussiana phenylalanine ammonia lyase
Smo_PAL1_11_1 Smo_PAL1_9_1
Smo_PAL1_12_1
100500611152738
AAX95429 Oryza sativa (japonica cultivar-group) ABA95540 phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
ABA98757 Oryza sativa (japonica cultivar-group) phenylalanine ammonia-lyase
10095
Smo_PAL1_5_1
69
AAO73468 Ginkgo biloba phenylalanine ammonia-lyase
AAX20146 Taxus x media phenylalanine aminomutase
AAT47186 Taxus canadensis AAU01185 phenylalanine aminomutase/phenylalanine aminomutase
50
AAU01182 Taxus wallichiana var. chinensis AAU01183 AAU01184 Taxus x media phenylalanine aminomutase/phenylalanine aminomutase /phenylalanine aminomutase
100100100
XP_755245 Aspergillus fumigatus Af293 EAL93207 phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
XP_958734 Neurospora crassa N150 XP_332083 Neurospora crassa EAA29498 hypothetical protein/hypothetical protein /hypothetical protein
BAE55583 Aspergillus oryzae unnamed protein product
3895
1314202A Rhodosporidium toruloides P11544 CAA35886 AAA33883 CAA31209 1314202A Phe ammonia lyase/PALY_RHOTO Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase /phenylalanine ammonia-lyase/L-phenylalanine ammonia-lyase
P10248 Rhodotorula mucilaginosa CAA31486 PALY_RHORB Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
100
0.100