query gene name (DCL4g): global / partial tree
File name:
568 aa residues 36 OTU included.
Results of partial trees included / Partial tree including Ppa.
Assemble Job Id:
Tree job id: LgjQ9H
BP values out of 100
Analyzed by tomoakin@kenroku.kanazawa-u.ac.jp
Date: Fri Mar 23 09:21:40 JST 2007
AT5G20320 = NP_197532 ATP binding/ATP-dependent helicase/RNA binding /double-stranded RNA binding /helicase/nucleic acid binding /ribonuclease III
AAZ80387 Arabidopsis thaliana dicer-like 4
100
XP_473129 Oryza sativa (japonica cultivar-group) CAE03362 OSJNBb0065L13.5/OSJNBb0065L13.5
100
Ppa_DCL4_11_1
74
Smo_DCL4_58_1
Smo_DCL4_133_1
10032
AT3G03300 = NP_566199 DCL2; ATP binding/ATP-dependent helicase/RNA binding /double-stranded RNA binding /helicase/nucleic acid binding /ribonuclease III
AAF26098 Arabidopsis thaliana unknown protein
100
BAD34005 Oryza sativa (japonica cultivar-group) BAD36404 CAF protein-like/CAF protein-like
AAT76309 Oryza sativa (japonica cultivar-group) putative RNA helicase/RNAseIII protein, C-terminus truncated
10010048
NP_912466 Oryza sativa (japonica cultivar-group) AAM52322 Putative CAF protein/Putative CAF protein
ABD32724 Medicago truncatula Helicase, C-terminal; Argonaute and Dicer protein, PAZ; Type III restriction enzyme, res subunit; Ribonuclease III, bacterial
AT1G01040 = NP_171612 Q9SP32 AAF03534 AAF26461 AAG38019 AAG38020 DCL1 (DICER-LIKE1); ATP-dependent helicase/ribonuclease III /DICER_ARATH Endoribonuclease Dicer homolog (CARPEL FACTORY protein) (SHORT INTEGUMENTS 1 protein) (SUSPENSOR1 protein)/CAF
51100
Ppa_DCL4_16_1
Smo_DCL4_164_2
Smo_DCL4_136_1
10063100
Ppa_DCL4_52_1
Smo_DCL4_56_1
Smo_DCL4_176_1
9972
AT3G43920 = NP_189978 CAB88120 DCL3 (DICER-LIKE 3); ATP binding/ATP-dependent helicase/RNA binding /ribonuclease III /putative protein
NP_922059 Oryza sativa (japonica cultivar-group) AAL59041 AAP54346 putative RNA helicase/putative RNA helicase /RNA helicase, putative
BAD82327 Oryza sativa (japonica cultivar-group) putative Endoribonuclease Dicer homolog
541008961100
EAL25209 Drosophila pseudoobscura GA19635-PA
ABB54762 Drosophila yakuba ABB54763 ABB54764 ABB54766 Dicer-2/Dicer-2 /Dicer-2 /Dicer-2
ABB54755 Drosophila simulans ABB54757 ABB54760 Dicer-2/Dicer-2 /Dicer-2
NP_523778 Drosophila melanogaster AAF57830 Dicer-2 CG6493-PA/CG6493-PA
BAB69959 Drosophila melanogaster double-strand-specific ribonuclease
10099100100
XP_320248 Anopheles gambiae str. PEST EAA00264 ENSANGP00000016543/ENSANGP00000016543
AAW48725 Aedes aegypti dicer-2
100100
XP_790894 Strongylocentrotus purpuratus PREDICTED: similar to dicer1
XP_683474 Danio rerio PREDICTED: Dicer1, Dcr-1 homolog
99
NP_498761 Caenorhabditis elegans P34529 S44849 AAA28101 DiCer Related family member (dcr-1)/DCR1_CAEEL Endoribonuclease dcr-1/S44849 K12H4.8 protein - Caenorhabditis elegans/Dicer related protein 1
CAE75060 Caenorhabditis briggsae Hypothetical protein CBG22974
100100100
XP_753471 Aspergillus fumigatus Af293 EAL91433 RNA helicase/RNAse III /RNA helicase/RNAse III, putative
XP_384584 Gibberella zeae PH-1 EAA72789 hypothetical protein FG04408.1/hypothetical protein FG04408.1
NP_588215 Schizosaccharomyces pombe 972h- Q09884 Schizosaccharomyces pombe CAB37423 DEAD/DEAH box helicase /DCR1_SCHPO Cell cycle control protein dcr1 (ATP-dependent helicase dcr1) (RNA interference pathway protein dcr1)/SPCC584.10c
5999
0.100