query gene name (cry200partial): global / partial tree
File name:
176 aa residues 93 OTU included.
Results of partial trees included / Partial tree including Ppa.
Assemble Job Id:
Tree job id: 64CmFk
BP values out of 100
Analyzed by thirai@nibb.ac.jp
Date: Tue May 02 14:38:01 JST 2006
ZP_01152943 Halorhodospira halophila SL1 EAR45312 deoxyribodipyrimidine photolyase/deoxyribodipyrimidine photolyase
ZP_00866292 Alkalilimnicola ehrlichei MLHE-1 EAP33987 Deoxyribodipyrimidine photolyase/Deoxyribodipyrimidine photolyase
89
YP_526203 Saccharophagus degradans 2-40 ABD79991 Deoxyribodipyrimidine photolyase/Deoxyribodipyrimidine photolyase
YP_266726 Candidatus Pelagibacter ubique HTCC1062 AAZ22122 Deoxyribodipyrimidine photolyase (DNA photolyase) (Photoreactiv
NP_820171 Coxiella burnetii RSA 493 AAO90685 deoxyribodipyrimidine photolyase - class I/deoxyribodipyrimidine photolyase -
469
NP_832878 Bacillus cereus ATCC 14579 AAP10079 Deoxyribodipyrimidine photolyase/Deoxyribodipyrimidine photolyase
ZP_00235346 Bacillus cereus G9241 EAL16776 deoxyribodipyrimidine photolyase classI/deoxyribodipyrimidine photolyase classI
ZP_00743014 Bacillus thuringiensis serovar israelensis ATCC 35646 EAO52714 Deoxyribodipyrimidine photolyase/Deoxyribodipyr
NP_979486 Bacillus cereus ATCC 10987 AAS42094 deoxyribodipyrimidine photolyase family protein/deoxyribodipyrimidine photol
YP_037258 Bacillus thuringiensis serovar konkukian str. 97-27 AAT60249 deoxyribodipyrimidine photolyase/deoxyribodipyrimid
YP_029213 Bacillus anthracis str. Sterne ZP_00393396 Bacillus anthracis str. A2012 AAT55264 Bacillus anthracis str. Ster
994920581006
ZP_01102818 gamma proteobacterium KT 71 EAQ97908 Deoxyribodipyrimidine photo-lyase/Deoxyribodipyrimidine photo-lyase
ZP_00592239 Prosthecochloris aestuarii DSM 271 EAN22583 Deoxyribodipyrimidine photolyase/Deoxyribodipyrimidine photolyase
ZP_00549900 Desulfuromonas acetoxidans DSM 684 EAM72442 Deoxyribodipyrimidine photolyase/Deoxyribodipyrimidine photolyase
ZP_00605286 Magnetococcus sp. MC-1 EAN29992 Deoxyribodipyrimidine photolyase/Deoxyribodipyrimidine photolyase
ZP_00511390 Chlorobium limicola DSM 245 EAM43924 Deoxyribodipyrimidine photolyase/Deoxyribodipyrimidine photolyase
292272
ZP_01076795 Marinomonas sp. MED121 EAQ65014 putative photolyase/putative photolyase
50
ZP_01111629 Alteromonas macleodii 'Deep ecotype' EAR04040 DNA photolyase/DNA photolyase
2610
ZP_01145589 Acidiphilium cryptum JF-5 EAR40185 blue-light photoreceptor/blue-light photoreceptor
YP_427987 Rhodospirillum rubrum ATCC 11170 ABC23700 Deoxyribodipyrimidine photolyase/Deoxyribodipyrimidine photolyase
12
YP_522641 Rhodoferax ferrireducens DSM 15236 ABD69110 Deoxyribodipyrimidine photolyase/Deoxyribodipyrimidine photolyase
ZP_00566430 Methylobacillus flagellatus KT EAN01676 Deoxyribodipyrimidine photolyase/Deoxyribodipyrimidine photolyase
29
ZP_00593470 Ralstonia metallidurans CH34 EAN53760 Deoxyribodipyrimidine photolyase/Deoxyribodipyrimidine photolyase
YP_294929 Ralstonia eutropha JMP134 AAZ60085 Deoxyribodipyrimidine photolyase/Deoxyribodipyrimidine photolyase
10053
NP_464116 Listeria monocytogenes EGD-e CAC98667 Listeria monocytogenes hypothetical protein lmo0588/lmo0588
YP_282599 Streptococcus pyogenes MGAS5005 NP_269581 Streptococcus pyogenes M1 GAS NP_607593 Streptococcus pyogenes MGAS8
NP_801965 Streptococcus pyogenes SSI-1 YP_280640 Streptococcus pyogenes MGAS6180 NP_664963 Streptococcus pyogenes MGAS31
100
Ppa_Cry1-1_1_1
5665
ZP_00766400 Chloroflexus aurantiacus J-10-fl EAO60601 DNA photolyase, FAD-binding:DNA photolyase, N-terminal/DNA photolyas
4899
ZP_01017700 Parvularcula bermudensis HTCC2503 EAQ16147 blue light photoreceptor cryptochrome/blue light photoreceptor cryp
42
ZP_01197750 Xanthobacter autotrophicus Py2 EAS16760 putative DNA photolyase/putative DNA photolyase
NP_108272 Mesorhizobium loti MAFF303099 BAB53733 blue light photoreceptor cryptochrome/blue light photoreceptor cryptochro
15
NP_531913 Agrobacterium tumefaciens str. C58 NP_354235 AAK87020 AAL42229 DNA photolyase/hypothetical protein AGR_C_2249 /A
14
ZP_00846099 Rhodopseudomonas palustris BisB18 ABD88897 DNA photolyase, FAD-binding:DNA photolyase, N-terminal/Deoxyribodip
NP_771950 Bradyrhizobium japonicum USDA 110 BAC50575 DNA photolyase/DNA photolyase
YP_485980 Rhodopseudomonas palustris HaA2 ABD07069 Deoxyribodipyrimidine photolyase/Deoxyribodipyrimidine photolyase
NP_948518 Rhodopseudomonas palustris CGA009 CAE28620 Deoxyribodipyrimidine photolyase/Deoxyribodipyrimidine photolyase
64
ZP_00862589 Bradyrhizobium sp. BTAi1 EAP27333 Deoxyribodipyrimidine photolyase/Deoxyribodipyrimidine photolyase
ZP_00809902 Rhodopseudomonas palustris BisA53 EAO89787 Deoxyribodipyrimidine photolyase/Deoxyribodipyrimidine photolyase
ZP_00806962 Rhodopseudomonas palustris BisB5 EAO83474 Deoxyribodipyrimidine photolyase/Deoxyribodipyrimidine photolyase
4320383893
YP_191404 Gluconobacter oxydans 621H AAW60748 Deoxyribodipyrimidine photolyase/Deoxyribodipyrimidine photolyase
ZP_00420939 Burkholderia vietnamiensis G4 EAM32422 Deoxyribodipyrimidine photolyase/Deoxyribodipyrimidine photolyase
23
ZP_00454462 Burkholderia cenocepacia AU 1054 ZP_00461961 Burkholderia cenocepacia HI2424 ZP_00980085 Burkholderia cenoce
YP_369726 Burkholderia sp. 383 ABB09082 Deoxyribodipyrimidine photolyase/Deoxyribodipyrimidine photolyase
99
ZP_00688329 Burkholderia ambifaria AMMD EAO45540 Deoxyribodipyrimidine photolyase/Deoxyribodipyrimidine photolyase
93
YP_442347 Burkholderia thailandensis E264 ABC36661 deoxyribodipyrimidine photolyase/deoxyribodipyrimidine photolyase
ZP_01009280 Burkholderia mallei SAVP1 YP_102418 Burkholderia mallei ATCC 23344 ZP_00443822 Burkholderia mallei NCTC 1024
ZP_00492208 root YP_108944 Burkholderia pseudomallei K96243 ZP_00500676 root ZP_00890903 Burkholderia pseudomallei 110
98100721686
ZP_00951796 Oceanicaulis alexandrii HTCC2633 EAP90949 Deoxyribodipyrimidine photolyase/Deoxyribodipyrimidine photolyase
940218
YP_007671 Candidatus Protochlamydia amoebophila UWE25 CAF23396 putative photolyase/putative photolyase
AT4G08920 = NP_567341 1U3C H85089 1U3D 1924377A Q43125 AAB28724 AAD17364 CAB78016 AAK32756 AAB28725 AAM70572 CRY1 (CRYPTO
AAR08429 Orobanche minor cryptochrome 1
AAO23970 Pisum sativum AAS79662 AAS79663 AAS79664 cryptochrome 1/cryptochrome 1 apoprotein /cryptochrome 1 apoprotein /mut
AAD44161 Lycopersicon esculentum AAF72555 cryptochrome 1/cryptochrome 1
ABB36796 Nicotiana sylvestris cryptochrome 1
98604629
AAL02092 Lycopersicon esculentum AAL02093 cryptochrome 1b/Cryptochrome 1b
66
BAA82885 Oryza sativa (japonica cultivar-group) blue-light photoreceptor
XP_466372 Oryza sativa (japonica cultivar-group) BAB70686 BAD17529 cryptochrome 1a/cryptochrome 1a /cryptochrome 1a
85
ABB13328 Hordeum vulgare subsp. vulgare ABB13329 ABB13330 cryptochrome 1a/cryptochrome 1a /cryptochrome 1a
78
AAN37909 Sorghum bicolor AAV97867 cryptochrome 2 apoprotein/cryptochrome 2
ABB13331 Hordeum vulgare subsp. vulgare ABB13332 ABB13333 ABB13344 cryptochrome 1b/cryptochrome 1b /cryptochrome 1b /crypt
BAC78798 Oryza sativa (japonica cultivar-group) cryptochrome
XP_472681 Oryza sativa (japonica cultivar-group) CAD40850 BAB70688 OSJNBa0086B14.23/OSJNBa0086B14.23 /cryptochrome 1b
89573292100
BAA88424 Adiantum capillus-veneris BAA88426 blue light photoreceptor/blue light photoreceptor
Smo_Cry1-1_12_2 Smo_Cry1-1_2_1 Smo_Cry1-1_5_1
65
BAA88423 Adiantum capillus-veneris BAA88425 blue light photoreceptor/blue light photoreceptor
BAA32809 Adiantum capillus-veneris BAA32812 blue-light photoreceptor/blue-light photoreceptor
99
BAA32807 Adiantum capillus-veneris BAA32810 blue-light photoreceptor/blue-light photoreceptor
BAA32808 Adiantum capillus-veneris BAA32811 blue-light photoreceptor/blue-light photoreceptor
692415
Smo_Cry1-1_1_1
Smo_Cry1-1_9_1
10017
Ppa_Cry1-1_3_1 BAA83338 Physcomitrella patens BAB70665 blue light photoreceptor cryptochrome/blue-light receptor cryptochr
BAE54523 Marchantia paleacea var. diptera BAE54524 cryptochrome/cryptochrome
232964
ABB13334 Hordeum vulgare subsp. vulgare ABB13335 cryptochrome 2/cryptochrome 2
ABB13336 Hordeum vulgare subsp. vulgare cryptochrome 2
99
XP_466829 Oryza sativa (japonica cultivar-group) XP_506872 CAC82537 Oryza sativa (indica cultivar-group) CAC82538 BAC5698
100
ABB36797 Nicotiana sylvestris cryptochrome 2
AAF72556 Lycopersicon esculentum AAF72557 cryptochrome 2/cryptochrome 2
100
BAC67179 Armoracia rusticana cryptochrome 2
BAC67178 Armoracia rusticana cryptochrome 2
22
AAB04996 Arabidopsis thaliana AT-PHH1
P40115 Sinapis alba CAA50898 PHR1_SINAL Deoxyribodipyrimidine photo-lyase (DNA photolyase) (Photoreactivating enzyme)/photo
BAC67177 Armoracia rusticana cryptochrome 2
BAC67176 Armoracia rusticana cryptochrome 2
7652
AAL16377 Arabidopsis thaliana AAL16378 AAT80618 cryptochrome 2/cryptochrome 2 /cryptochrome 2
10
AT1G04400 = NP_849588 NP_171935 S71221 A86176 Q96524 AAB04997 CAA67508 AAD09837 AAB70435 AAL16379 AAP40403 AAP40463 AAT805
1315
AAT80619 Arabidopsis thaliana AAT80620 AAT80621 AAT80622 AAT80623 cryptochrome 2/cryptochrome 2 /cryptochrome 2 /cryptochr
35100
AAO23972 Pisum sativum cryptochrome 2B
AAS79667 Pisum sativum AAS79668 cryptochrome 2B apoprotein/cryptochrome 2B apoprotein
100
AAS79665 Pisum sativum AAS79666 cryptochrome 2A apoprotein/cryptochrome 2A apoprotein
93548995100
346_Cre
AAC37438 Chlamydomonas reinhardtii CPH1
100100
gnl|CMER|CMM076C_probable_cryptochrome
81
0.100