query gene name (HDA6.pt3): global / partial tree
File name:
100 aa residues 281 OTU included.
Results of partial trees included / Partial tree including Ppa.
Assemble Job Id:
Tree job id: tj1tra
BP values out of 100
Analyzed by chycheng@nibb.ac.jp
Date: Thu Jun 08 14:33:16 JST 2006
ZP_00762046 Vibrio sp. Ex25 COG0123: Deacetylases, including yeast histone deacetylase and acetoin utilization protein
NP_798524 Vibrio parahaemolyticus RIMD 2210633 BAC60408 histone deacetylase/AcuC/AphA family protein /histone deacetylase/AcuC/AphA family protein
83
ZP_01066772 Vibrio sp. MED222 EAQ51892 histone deacetylase/AcuC/AphA family protein /histone deacetylase/AcuC/AphA family protein
ZP_00992375 Vibrio splendidus 12B01 EAP92659 histone deacetylase/AcuC/AphA family protein /histone deacetylase/AcuC/AphA family protein
10082
ZP_00773864 Pseudoalteromonas atlantica T6c EAO69651 Histone deacetylase superfamily/Histone deacetylase superfamily
94
ZP_00523046 Solibacter usitatus Ellin6076 EAM57937 Histone deacetylase superfamily/Histone deacetylase superfamily
YP_446172 Salinibacter ruber DSM 13855 ABC45685 histone deacetylase/AcuC/AphA family protein /histone deacetylase/AcuC/AphA family protein
41
ZP_00601174 Rubrobacter xylanophilus DSM 9941 EAN35781 Histone deacetylase superfamily/Histone deacetylase superfamily
50
NP_952275 Geobacter sulfurreducens PCA AAR34598 histone deacetylase/AcuC/AphA family protein /histone deacetylase/AcuC/AphA family protein
YP_384695 Geobacter metallireducens GS-15 ABB31970 Histone deacetylase superfamily/Histone deacetylase superfamily
100
ZP_01142293 Geobacter uraniumreducens Rf4 EAR35786 histone deacetylase/AcuC/AphA family protein /histone deacetylase/AcuC/AphA family protein
87
ZP_00550883 Desulfuromonas acetoxidans DSM 684 EAM71632 Histone deacetylase superfamily:IMP dehydrogenase/GMP reductase /Histone deacetylase superfamily:IMP dehydrogenase/GMP reductase
YP_357062 Pelobacter carbinolicus DSM 2380 ABA88892 histone deacetylase/AcuC/AphA family protein /histone deacetylase/AcuC/AphA family protein
10098
ZP_01154133 Methanosaeta thermophila PT EAR48283 Histone deacetylase superfamily/Histone deacetylase superfamily
YP_446446 Salinibacter ruber DSM 13855 ABC44074 acetoin utilization protein acuC/acetoin utilization protein acuC
YP_143741 Thermus thermophilus HB8 AAP04525 Thermus caldophilus BAD70298 Thermus thermophilus HB8 acetoin utilization protein AcuC (putative T-histone deacetylase)/putative T-histone deacetylase /acetoin utilization protein AcuC (putative T-histo
YP_004079 Thermus thermophilus HB27 AAS80452 putative T-histone deacetylase/putative T-histone deacetylase
10097
Ppa_HDA6_3_1
NP_390849 Bacillus subtilis subsp. subtilis str. 168 P39067 Bacillus subtilis AAA68284 AAC00394 CAB14949 Bacillus subtilis subsp. subtilis str. 168 acetoin dehydrogenase/ACUC_BACSU Acetoin utilization protein acuC /acetoin utilization protein/ace
YP_080262 Bacillus licheniformis ATCC 14580 YP_092676 AAU24624 AAU41983 acetoin dehydrogenase/AcuC /acetoin dehydrogenase /AcuC
58
NP_693144 Oceanobacillus iheyensis HTE831 BAC14179 acetoin utilization protein/acetoin utilization protein
ZP_01180363 Bacillus cereus subsp. cytotoxis NVH 391-98 EAR70920 Histone deacetylase superfamily/Histone deacetylase superfamily
ZP_01182741 Bacillus weihenstephanensis KBAB4 EAR77727 Histone deacetylase superfamily/Histone deacetylase superfamily
ZP_00394995 Bacillus anthracis str. A2012 ZP_00236127 Bacillus cereus G9241 NP_981097 Bacillus cereus ATCC 10987 YP_030810 Bacillus anthracis str. Sterne NP_847116 Bacillus anthracis str. Ames YP_021561 Bacillus anthracis str. 'Ames Ancestor'
47
YP_038712 Bacillus thuringiensis serovar konkukian str. 97-27 AAT63630 acetoin utilization protein/acetoin utilization protein
63
ZP_00740751 Bacillus thuringiensis serovar israelensis ATCC 35646 NP_834368 Bacillus cereus ATCC 14579 AAP11569 EAO54976 Bacillus thuringiensis serovar israelensis ATCC 35646 Acetoin utilization acuC protein/Acetoin utilization acuC protein /Acet
100933636
ZP_01172971 Bacillus sp. NRRL B-14911 EAR64324 acetoin utilization protein/acetoin utilization protein
YP_148662 Geobacillus kaustophilus HTA426 BAD77094 acetoin utilization protein/acetoin utilization protein
8464
NP_244103 Bacillus halodurans C-125 BAB06956 acetoin dehydrogenase/acetoin dehydrogenase
35
YP_176258 Bacillus clausii KSM-K16 BAD65297 acetoin utilization protein AcuC/acetoin utilization protein AcuC
5072
YP_359046 Carboxydothermus hydrogenoformans Z-2901 ABB14015 acetoin utilization protein AcuC/acetoin utilization protein AcuC
ZP_00602377 Rubrobacter xylanophilus DSM 9941 EAN34572 Histone deacetylase superfamily/Histone deacetylase superfamily
7463
ZP_00540090 Exiguobacterium sibiricum 255-15 EAM86733 Histone deacetylase superfamily/Histone deacetylase superfamily
76
Q56195 Staphylococcus xylosus CAA64714 ACUC_STAXY Acetoin utilization protein acuC/acuC
YP_301118 Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 BAE18173 acetoin utilization protein/acetoin utilization protein
64
YP_253102 Staphylococcus haemolyticus JCSC1435 BAE04496 acetoin utilization protein/acetoin utilization protein
60
YP_494375 Staphylococcus aureus subsp. aureus USA300 NP_372259 Staphylococcus aureus subsp. aureus Mu50 YP_417065 Staphylococcus aureus RF122 YP_043781 Staphylococcus aureus subsp. aureus MSSA476 YP_500353 Staphylococcus aureus subsp. aureus NC
YP_041199 Staphylococcus aureus subsp. aureus MRSA252 Q6GFX3 CAG40804 histone deacetylase family protein/ACUC_STAAR Acetoin utilization protein acuC /histone deacetylase family protein
100100833325
ZP_00414725 Arthrobacter sp. FB24 EAL94437 Histone deacetylase superfamily/Histone deacetylase superfamily
ZP_00994108 Janibacter sp. HTCC2649 EAQ00362 putative acetoin utilization protein/putative acetoin utilization protein
NP_627540 Streptomyces coelicolor A3(2) CAB45364 acetoin utilization protein/putative acetoin utilization protein
NP_825906 Streptomyces avermitilis MA-4680 BAC72441 acetoin dehydrogenase/putative acetoin dehydrogenase
97
ZP_00618894 Kineococcus radiotolerans SRS30216 EAM73356 Histone deacetylase superfamily/Histone deacetylase superfamily
32
YP_482585 Frankia sp. CcI3 ABD12856 histone deacetylase superfamily/histone deacetylase superfamily
ZP_00574152 Frankia sp. EAN1pec EAN11608 Histone deacetylase superfamily/Histone deacetylase superfamily
98
ZP_00658186 Nocardioides sp. JS614 EAO07056 Histone deacetylase superfamily/Histone deacetylase superfamily
37
YP_290763 Thermobifida fusca YX AAZ56740 putative acetoin utilization protein/putative acetoin utilization protein
2723
ZP_01137872 Acidothermus cellulolyticus 11B EAR31255 putative acetoin dehydrogenase/putative acetoin dehydrogenase
3141
ZP_00380214 Brevibacterium linens BL2 COG0123: Deacetylases, including yeast histone deacetylase and acetoin utilization protein
1134
YP_119990 Nocardia farcinica IFM 10152 BAD58626 putative acetoin dehydrogenase/putative acetoin dehydrogenase
931937
NP_378307 Sulfolobus tokodaii str. 7 BAB67416 hypothetical acetoin utilization acuC protein/362aa long hypothetical acetoin utilization acuC protein
NP_341604 Sulfolobus solfataricus P2 AAK40394 Acetylpolyamine aminohydrolase/Acetylpolyamine aminohydrolase
55
YP_254925 Sulfolobus acidocaldarius DSM 639 AAY79632 histone deacetylase/histone deacetylase
99
NP_068969 Archaeoglobus fulgidus DSM 4304 O30107 Archaeoglobus fulgidus AAB91099 Archaeoglobus fulgidus DSM 4304 acetylpolyamine aminohydrolase (aphA)/Y130_ARCFU Hypothetical protein AF0130/acetylpolyamine aminohydrolase (aphA)
NP_614338 Methanopyrus kandleri AV19 AAM02268 Predicted deacetylase/Predicted deacetylase
38
YP_502398 Methanospirillum hungatei JF-1 ABD40679 histone deacetylase superfamily/histone deacetylase superfamily
99
YP_502193 Methanospirillum hungatei JF-1 ABD40474 histone deacetylase superfamily/histone deacetylase superfamily
NP_711096 Leptospira interrogans serovar Lai str. 56601 AAN48114 histone deacetylase family protein/histone deacetylase family protein
YP_002647 Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 AAS71284 acetoin- histone deacetylase family/acetoin- histone deacetylase family
1004827
YP_462208 Syntrophus aciditrophicus SB ABC78040 histone deacetylase family protein/histone deacetylase family protein
ZP_01154587 Methanosaeta thermophila PT EAR47743 Histone deacetylase superfamily/Histone deacetylase superfamily
25
AAU84294 uncultured archaeon GZfos9D1 acetoin utilization protein
AAU82696 uncultured archaeon GZfos19A5 acetoin utilization protein
AAU43699 uncultured archaeon GZfos26D8 acetoin utilization protein
10010017
ZP_00599665 Rubrobacter xylanophilus DSM 9941 EAN37243 Histone deacetylase superfamily/Histone deacetylase superfamily
1011
XP_718366 Candida albicans SC5314 XP_718271 EAK99342 EAK99440 putative class II histone deacetylase subunit Hda1p/putative class II histone deacetylase subunit Hda1p /likely class II histone deacetylase subunit Hda1p /likely class II histone deacet
AAK55655 Candida albicans histone deacetylase HDA1
100
XP_504372 Yarrowia lipolytica CLIB122 CAG79971 hypothetical protein/unnamed protein product
XP_447854 Candida glabrata CBS 138 CAG60803 unnamed protein product/unnamed protein product
XP_454328 Kluyveromyces lactis NRRL Y-1140 CAG99415 unnamed protein product/unnamed protein product
88
NP_983880 Eremothecium gossypii AAS51704 Ashbya gossypii ATCC 10895 ADL216Cp/ADL216Cp
10033
XP_758249 Ustilago maydis 521 EAK83157 hypothetical protein UM02102.1/hypothetical protein UM02102.1
4070
AAP92528 Zea mays HDA1
XP_479060 Oryza sativa (japonica cultivar-group) BAC84464 putative histone deacetylase/putative histone deacetylase
99
AT5G61060 = NP_200914 BAB10370 AAM13986 AAM53342 AAN15392 histone deacetylase/unnamed protein product /putative histone deacetylase /histone deacetylase-like protein /histone deacetylase-like protein
97
EAL32252 Drosophila pseudoobscura GA19406-PA
NP_727842 Drosophila melanogaster NP_573017 NP_727843 AAD21090 AAF48443 AAN09661 AAN09662 AAO45222 HDAC6 CG6170-PB, isoform B/HDAC6 CG6170-PA, isoform A /HDAC6 CG6170-PC, isoform C /histone deacetylase HDA2 /CG6170-PA, isoform A /CG6170-PB, isoform B
99
XP_310554 Anopheles gambiae str. PEST XP_565819 EAL41174 EAA06256 ENSANGP00000007396/ENSANGP00000027638 /ENSANGP00000027638 /ENSANGP00000007396
95
XP_693858 Danio rerio PREDICTED: similar to Histone deacetylase 6 (HD6) (Histone deacetylase mHDA2)
56
XP_595731 Bos taurus PREDICTED: similar to Histone deacetylase 4 (HD4)
BAA22957 Homo sapiens KIAA0288 protein
60
XP_343630 Rattus norvegicus XP_849514 Canis familiaris PREDICTED: similar to Histone deacetylase 4/PREDICTED: similar to Histone deacetylase 4 (HD4)
56
NP_989644 Gallus gallus P83038 BAB60957 histone deacetylase 4/HDAC4_CHICK Histone deacetylase 4 (HD4) /histone deacetylase-4
90
XP_518986 Pan troglodytes NP_478056 Homo sapiens NP_848512 NP_848510 Q9UKV0 AAK66821 BAC04630 AAO27363 CAD30851 AAI11736 PREDICTED: similar to histone deacetylase 9 isoform 5; MEF-2 interacting transcription repressor (MITR) protein; histone deacet
XP_234063 Rattus norvegicus BAD32295 Mus musculus PREDICTED: similar to mKIAA0744 protein/mKIAA0744 protein
97
BAA91545 Homo sapiens unnamed protein product
34
NP_034542 Mus musculus Q9Z2V6 AAF31418 AAD09834 BAC65607 AAH60609 BAE27204 BAE33201 histone deacetylase 5/HDAC5_MOUSE Histone deacetylase 5 (HD5) (Histone deacetylase mHDA1)/histone deacetylase 5 /histone deacetylase mHDA1 /mKIAA0600 protein /Histone
52100303614
BAC42833 Arabidopsis thaliana putative histone deacetylase
AAM93212 Zea mays AAM93213 AAM93214 AAM93215 histone deacetylase HDA110 isoform 1/histone deacetylase HDA110 isoform 2 /histone deacetylase HDA110 isoform 3 /histone deacetylase HDA110 isoform 4
84
Ppa_HDA6_8_1
Ppa_HDA6_5_1
938336
XP_955470 Theileria annulata strain Ankara CAI75994 Theileria annulata hypothetical protein TA18230/histone deacetylase family protein, putative
XP_762912 Theileria parva strain Muguga EAN30629 Theileria parva hypothetical protein TP03_0788/hypothetical protein TP03_0788
1001912
NP_252463 Pseudomonas aeruginosa PAO1 AAG07161 probable acetylpolyamine aminohydrolase/probable acetylpolyamine aminohydrolase
ZP_00137191 Pseudomonas aeruginosa UCBPP-PA14 COG0123: Deacetylases, including yeast histone deacetylase and acetoin utilization protein
100
YP_260466 Pseudomonas fluorescens Pf-5 AAY92630 histone deacetylase family protein/histone deacetylase family protein
29
NP_929599 Photorhabdus luminescens subsp. laumondii TTO1 CAE14646 hypothetical protein plu2353/unnamed protein product
BAD88603 Klebsiella aerogenes deacetylase
4953
YP_508952 Jannaschia sp. CCS1 ABD53927 histone deacetylase superfamily/histone deacetylase superfamily
11
ZP_00986757 Burkholderia dolosa AUO158 COG0123: Deacetylases, including yeast histone deacetylase and acetoin utilization protein
ZP_00979820 Burkholderia cenocepacia PC184 COG0123: Deacetylases, including yeast histone deacetylase and acetoin utilization protein
ZP_00690798 Burkholderia ambifaria AMMD EAO43062 Histone deacetylase superfamily/Histone deacetylase superfamily
3721
YP_369470 Burkholderia sp. 383 ABB08826 Histone deacetylase superfamily/Histone deacetylase superfamily
94
ZP_00470464 root YP_333884 Burkholderia pseudomallei 1710b ZP_00494409 root ZP_01009618 Burkholderia mallei SAVP1 ZP_00477743 root ZP_00501794 ZP_00941672 Burkholderia pseudomallei 406e ZP_00936011 Burkholderia mallei JHU ZP_00895099 root
YP_442634 Burkholderia thailandensis E264 ABC37685 histone deacetylase family protein/histone deacetylase family protein
916916
ZP_01058153 Roseobacter sp. MED193 EAQ43975 histone deacetylase/AcuC/AphA family protein /histone deacetylase/AcuC/AphA family protein
ZP_00961256 Roseovarius nubinhibens ISM EAP75496 histone deacetylase/AcuC/AphA family protein /histone deacetylase/AcuC/AphA family protein
38
4477_Cre
3419
ZP_00956777 Sulfitobacter sp. EE-36 EAP82748 deacetylase/probable acetylpolyamine aminohydrolase /deacetylase /probable acetylpolyamine aminohydrolase
ZP_00962086 Sulfitobacter sp. NAS-14.1 EAP81500 deacetylase/probable acetylpolyamine aminohydrolase /deacetylase /probable acetylpolyamine aminohydrolase
9931
ZP_00423342 Burkholderia vietnamiensis G4 EAM30025 Histone deacetylase superfamily/Histone deacetylase superfamily
41
ZP_00486698 Burkholderia pseudomallei 668 YP_331748 Burkholderia pseudomallei 1710b ZP_00499133 root ZP_01096361 ZP_00939908 Burkholderia pseudomallei 406e ZP_00493737 root ZP_00475870 ZP_01027363 Burkholderia mallei 10229 YP_101966 Burkhol
59
ABD32780 Medicago truncatula Histone deacetylase superfamily
AAU90087 Oryza sativa (japonica cultivar-group) unknown protein
AAU90088 Oryza sativa (japonica cultivar-group) unknown protein
100
AT1G08460 = NP_563817 AAK95258 AAL16299 AAM19887 AAM49769 histone deacetylase/At1g08460/T27G7_7 /At1g08460/T27G7_7 /At1g08460/T27G7_7 /HDA8
481002168
AAZ32522 uncultured euryarchaeote Alv-FOS4 deacetylase
333623
NP_213698 Aquifex aeolicus VF5 1C3R Aquifex aeolicus 1C3P 1C3S 1C3R AAC07100 Aquifex aeolicus VF5 acetoin utilization protein/B Chain B, Crystal Structure Of An Hdac Homolog Complexed With Trichostatin A /A Chain A, Crystal Structure Of An Hdac H
YP_352453 Rhodobacter sphaeroides 2.4.1 ABA78552 putative Acetoin utilization protein/putative Acetoin utilization protein
ZP_00918481 Rhodobacter sphaeroides ATCC 17029 EAP68208 acetoin utilization protein AcuC/acetoin utilization protein AcuC
87
ZP_00915831 Rhodobacter sphaeroides ATCC 17025 EAP62875 acetoin utilization protein AcuC/acetoin utilization protein AcuC
99
YP_511216 Jannaschia sp. CCS1 ABD56191 histone deacetylase superfamily/histone deacetylase superfamily
ZP_01003961 Loktanella vestfoldensis SKA53 EAQ06096 putative Acetoin utilization protein/putative Acetoin utilization protein
7554
ZP_01034958 Roseovarius sp. 217 EAQ26033 acetoin utilization protein AcuC/acetoin utilization protein AcuC
59
YP_167402 Silicibacter pomeroyi DSS-3 AAV95443 acetoin utilization protein AcuC/acetoin utilization protein AcuC
986626
CAJ04998 Leishmania major histone deacetylase, putative
XP_504627 Yarrowia lipolytica CLIB122 CAG80231 hypothetical protein/unnamed protein product
XP_760381 Ustilago maydis 521 EAK85283 hypothetical protein UM04234.1/hypothetical protein UM04234.1
XP_829617 Trypanosoma brucei TREU927 EAN80505 Trypanosoma brucei histone deacetylase 2/histone deacetylase 2
AAL86697 Trypanosoma brucei histone deacetylase-like protein HDO2
100
XP_815987 Trypanosoma cruzi strain CL Brener EAN94136 Trypanosoma cruzi histone deacetylase/histone deacetylase, putative
XP_810218 Trypanosoma cruzi strain CL Brener EAN88367 Trypanosoma cruzi histone deacetylase/histone deacetylase, putative
8610032
XP_458924 Debaryomyces hansenii CBS767 CAG87078 hypothetical protein DEHA0D11506g/unnamed protein product
XP_723599 Candida albicans SC5314 XP_711859 EAK92631 EAK92651 putative histone deacetylase Hos1p/putative histone deacetylase Hos1p /likely histone deacetylase Hos1p /likely histone deacetylase Hos1p
100
XP_445477 Candida glabrata CBS 138 CAG58388 unnamed protein product/unnamed protein product
NP_015393 Saccharomyces cerevisiae Q12214 CAA89185 CAA94976 Putative class I histone deacetylase (HDAC) with sequence similarity to Hda1p, Rpd3p, Hos2p, and Hos3p; deletion results in increased histone acetylation at rDNA repeats; interacts with the
42
NP_983756 Eremothecium gossypii AAS51580 Ashbya gossypii ATCC 10895 ADL339Wp/ADL339Wp
52
XP_451946 Kluyveromyces lactis NRRL Y-1140 CAH02339 unnamed protein product/unnamed protein product
98502128
XP_568065 Cryptococcus neoformans var. neoformans JEC21 AAW46548 histone deacetylase 3/histone deacetylase 3, putative
EAL18895 Cryptococcus neoformans var. neoformans B-3501A hypothetical protein CNBI1560
10012
XP_521133 Pan troglodytes NP_060956 Homo sapiens 1W22 1T64 Q9BY41 1T64 1W22 1T67 1VKG 1T69 1VKG CAB90213 AAF73076 AAF73428 AAH50433 PREDICTED: similar to Histone deacetylase 8 (HD8) (CDA07)/histone deacetylase 8 /B Chain B, Crystal Structure Of Inh
XP_538078 Canis familiaris XP_859102 PREDICTED: similar to Histone deacetylase 8 (HD8) isoform 1/PREDICTED: similar to Histone deacetylase 8 (HD8) isoform 3
XP_612570 Bos taurus PREDICTED: similar to Histone deacetylase 8 (HD8)
6649
XP_343805 Rattus norvegicus NP_081658 Mus musculus Q8VH37 BAB27550 AAH61257 BAE20928 PREDICTED: similar to Histone deacetylase 8 (HD8)/histone deacetylase 8 /HDAC8_MOUSE Histone deacetylase 8 (HD8) /unnamed protein product /Histone deacetylase 8 /u
96
XP_420178 Gallus gallus PREDICTED: similar to Histone deacetylase 8 (HD8)
95
AAH73234 Xenopus laevis MGC80565 protein
99
NP_998596 Danio rerio AAH55541 histone deacetylase 8/Histone deacetylase 8
CAF94481 Tetraodon nigroviridis unnamed protein product
9999
XP_791175 Strongylocentrotus purpuratus PREDICTED: similar to histone deacetylase 8
93
CAE67777 Caenorhabditis briggsae Hypothetical protein CBG13352
NP_495678 Caenorhabditis elegans Q09440 CAA86662 Histone DeAcetylase family member (hda-2)/HDA2_CAEEL Putative histone deacetylase 2/Hypothetical protein C08B11.2
100
3231_Cre
19
CAJ04180 Leishmania major histone deacetylase, putative
XP_815249 Trypanosoma cruzi strain CL Brener XP_816761 EAN93398 Trypanosoma cruzi EAN94910 histone deacetylase 1/histone deacetylase 1 /histone deacetylase 1, putative /histone deacetylase 1, putative
AAL86696 Trypanosoma brucei histone deacetylase-like protein HDO1
XP_822424 Trypanosoma brucei TREU927 EAN77596 Trypanosoma brucei histone deacetylase 1/histone deacetylase 1
100100100
XP_572385 Cryptococcus neoformans var. neoformans JEC21 EAL17695 Cryptococcus neoformans var. neoformans B-3501A AAW45078 Cryptococcus neoformans var. neoformans JEC21 histone deacetylation-related protein/hypothetical protein CNBL2100 /histone d
XP_756808 Ustilago maydis 521 EAK80829 hypothetical protein UM00661.1/hypothetical protein UM00661.1
84
XP_717660 Candida albicans SC5314 XP_717754 EAK98698 EAK98798 putative SET3 histone deacetylase complex component Hos2p/putative SET3 histone deacetylase complex component Hos2p /potential SET3 histone deacetylase complex component Hos2p /potential S
XP_456707 Debaryomyces hansenii CBS767 CAG84663 hypothetical protein DEHA0A08844g/unnamed protein product
100
XP_455495 Kluyveromyces lactis NRRL Y-1140 CAG98203 unnamed protein product/unnamed protein product
NP_985719 Eremothecium gossypii AAS53543 Ashbya gossypii ATCC 10895 AFR172Cp/AFR172Cp
XP_444912 Candida glabrata CBS 138 CAG57805 hypothetical protein CAGL0A03322g/unnamed protein product
NP_011321 Saccharomyces cerevisiae P53096 CAA62950 CAA96906 Histone deacetylase required for gene activation via specific deacetylation of lysines in H3 and H4 histone tails; subunit of the Set3 complex, a meiotic-specific repressor of sporulation sp
7677869731
NP_594079 Schizosaccharomyces pombe 972h- O13298 Schizosaccharomyces pombe BAA23598 CAA15916 hypothetical protein SPAC3G9.07c/PHD1_SCHPO Histone deacetylase phd1 /Phd1p /hda1
30
XP_501501 Yarrowia lipolytica CLIB122 CAG81802 hypothetical protein/unnamed protein product
31
ABD76555 Aspergillus niger conserved hypothetical protein
XP_749513 Aspergillus fumigatus Af293 EAL87475 histone deacetylase HosA/histone deacetylase HosA
XP_661410 Aspergillus nidulans FGSC A4 AAF80490 Emericella nidulans EAA60014 Aspergillus nidulans FGSC A4 hypothetical protein AN3806.2/histone deacetylase HosA /hypothetical protein AN3806.2
4810030
AAL56814 Cochliobolus carbonum putative histone deacetylase
46
XP_381529 Gibberella zeae PH-1 EAA68034 hypothetical protein FG01353.1/hypothetical protein FG01353.1
XP_964451 Neurospora crassa N150 XP_329983 Neurospora crassa EAA35215 hypothetical protein/hypothetical protein /hypothetical protein
94
EAQ93275 Chaetomium globosum CBS 148.51 hypothetical protein CHGG_01510
10032
EAS07200 Tetrahymena thermophila SB210 Histone deacetylase family protein
AAG00980 Tetrahymena thermophila histone deacetylase I
100
EAS02070 Tetrahymena thermophila SB210 Histone deacetylase family protein
EAR99905 Tetrahymena thermophila SB210 Histone deacetylase family protein
7817
NP_001016883 Xenopus tropicalis AAH70873 Xenopus laevis CAJ81493 Xenopus tropicalis histone deacetylase 3/LOC432017 protein /histone deacetylase 3
XP_886845 Bos taurus XP_873571 XP_886817 XP_858153 Canis familiaris XP_535219 NP_003874 Homo sapiens XP_858113 Canis familiaris XP_886831 Bos taurus O15379 Homo sapiens AAC52038 AAB87752 AAB88240 AAB88241 AAC98927 AAC26509 AAG35536 AAH00614
NP_034541 Mus musculus O88895 AAC36305 AAC67258 AAF28798 AAF36425 AAH61988 Rattus norvegicus BAE26265 Mus musculus histone deacetylase 3/HDAC3_MOUSE Histone deacetylase 3 (HD3)/histone deacetylase 3 /histone deacetylase 3 /histone deacetylase 3 /
79
CAG00682 Tetraodon nigroviridis unnamed protein product
NP_957284 Danio rerio AAH44543 histone deacetylase 3/Similar to histone deacetylase 3
944367
NP_990078 Gallus gallus P56520 AAB96925 histone deacetylase 3/HDAC3_CHICK Histone deacetylase 3 (HD3)/histone deacetylase-3; HD-3
100
XP_794761 Strongylocentrotus purpuratus PREDICTED: similar to histone deacetylase 3
57
XP_646719 Dictyostelium discoideum AX4 EAL72519 Dictyostelium discoideum hypothetical protein DDB0190980/hypothetical protein DDB0190980
26
XP_395811 Apis mellifera PREDICTED: similar to ENSANGP00000012089
XP_322018 Anopheles gambiae str. PEST EAA01056 ENSANGP00000012089/ENSANGP00000012089
NP_651978 Drosophila melanogaster AAC83649 AAF52023 AAL28869 Hdac3 CG2128-PA/histone deacetylase dHDAC3 /CG2128-PA /LD23745p
5810042
XP_627509 Cryptosporidium parvum Iowa II XP_668169 Cryptosporidium hominis TU502 AAG28403 Cryptosporidium parvum CAD98682 EAK90124 EAL37930 Cryptosporidium hominis histone deacetylase HDA2/Rpd3p /histone deacetylase /putative histone deacetylas
AAL83942 Physarum polycephalum putative histone deacetylase
XP_647498 Dictyostelium discoideum AX4 EAL73465 Dictyostelium discoideum hypothetical protein DDB0189724/hypothetical protein DDB0189724
46
NP_597645 Encephalitozoon cuniculi GB-M1 CAD26280 HISTONE DEACETYLASE 1/HISTONE DEACETYLASE 1
NP_113378 Guillardia theta AAK39934 histone deacetylase/histone deacetylase
344
AAY53803 Toxoplasma gondii histone deacetylase 3
XP_764608 Theileria parva strain Muguga XP_952664 Theileria annulata strain Ankara CAI74932 Theileria annulata EAN32325 Theileria parva histone deacetylase/histone deacetylase /histone deacetylase, putative /histone deacetylase, putative
XP_680051 Plasmodium berghei strain ANKA XP_745306 Plasmodium chabaudi chabaudi XP_724093 Plasmodium yoelii yoelii str. 17XNL EAA15658 Plasmodium yoelii yoelii CAH98271 Plasmodium berghei CAH87890 Plasmodium chabaudi Histone deacetylase/His
NP_704795 Plasmodium falciparum 3D7 AAD22407 CAD51938 Histone deacetylase/histone deacetylase /Histone deacetylase
1009395
XP_625348 Cryptosporidium parvum Iowa II XP_667698 Cryptosporidium hominis TU502 CAD98610 Cryptosporidium parvum EAK87357 EAL37469 Cryptosporidium hominis RPD3/HD1 histone deacetylase /histone deacetylase /histone deacetylase /RPD3/HD1 histone
AAG21919 Cryptosporidium parvum histone deacetylase
10078
AAL33655 Zea mays histone deacetylase
CAE04901 Oryza sativa (japonica cultivar-group) OSJNBa0042I15.23
100
AT3G44680 = NP_190054 AAN72014 AAP31920 HDA9; histone deacetylase/putative protein /At3g44680
AAS79608 Ipomoea trifida putative histone deacetylase
2828
Smo_HDA6_12_1 Smo_HDA6_2_1
Ppa_HDA6_4_1
339812
gnl|CMER|CMS068C_histone_deacetylase
1360_Cre
44
4198_Cre
XP_650263 Entamoeba histolytica HM-1:IMSS AAV33348 Entamoeba histolytica EAL44877 Entamoeba histolytica HM-1:IMSS histone deacetylase/histone deacetylase 1 /histone deacetylase, putative
30400010
XP_662097 Aspergillus nidulans FGSC A4 AAF80489 Emericella nidulans EAA60836 Aspergillus nidulans FGSC A4 hypothetical protein AN4493.2/histone deacetylase RpdA /hypothetical protein AN4493.2
XP_749474 Aspergillus fumigatus Af293 EAL87436 histone deacetylase RpdA/histone deacetylase RpdA
82
BAE60355 Aspergillus oryzae unnamed protein product
51
XP_380956 Gibberella zeae PH-1 EAA70726 hypothetical protein FG00780.1/hypothetical protein FG00780.1
EAQ93036 Chaetomium globosum CBS 148.51 hypothetical protein CHGG_01271
XP_964367 Neurospora crassa N150 XP_325004 Neurospora crassa EAA35131 hypothetical protein/hypothetical protein /hypothetical protein
9135
AAK35180 Cochliobolus carbonum histone deacetylase 2
6624
NP_014069 Saccharomyces cerevisiae P32561 AAB20328 CAA58228 CAA96263 AAT92832 Histone deacetylase; regulates transcription and silencing; Rpd3p/RPD3_YEAST Histone deacetylase RPD3 (Transcriptional regulatory protein RPD3)/RPD3 /global transcriptional
XP_445032 Candida glabrata CBS 138 CAG57932 unnamed protein product/unnamed protein product
89
NP_987061 Eremothecium gossypii AAS54885 Ashbya gossypii ATCC 10895 AGR395Wp/AGR395Wp
65
XP_719896 Candida albicans SC5314 XP_719779 EAL00908 EAL01033 putative Sin3.Rpd3 histone deacetylase complex component Rpd3p/putative Sin3.Rpd3 histone deacetylase complex component Rpd3p /potential Sin3.Rpd3 histone deacetylase complex component Rpd
32
XP_460469 Debaryomyces hansenii CBS767 CAG88776 hypothetical protein DEHA0F02706g/unnamed protein product
33
XP_454037 Kluyveromyces lactis NRRL Y-1140 AAK58884 Kluyveromyces lactis CAG99124 Kluyveromyces lactis NRRL Y-1140 unnamed protein product/reduced potassium dependency 3 Rpd3p /unnamed protein product
89
XP_504286 Yarrowia lipolytica CLIB122 CAG79885 hypothetical protein/unnamed protein product
3212
XP_715765 Candida albicans SC5314 XP_715815 EAK96751 EAK96802 putative Sin3.Rpd3 histone deacetylase complex component Rpd3p/putative Sin3.Rpd3 histone deacetylase complex component Rpd3p /potential Sin3.Rpd3 histone deacetylase complex component Rpd
AAK55656 Candida albicans histone deacetylase RPD3
10059
XP_571598 Cryptococcus neoformans var. neoformans JEC21 EAL20377 Cryptococcus neoformans var. neoformans B-3501A AAW44291 Cryptococcus neoformans var. neoformans JEC21 hypothetical protein/hypothetical protein CNBF1870 /conserved hypothetical pro
XP_758212 Ustilago maydis 521 AAM15960 Ustilago maydis EAK83185 Ustilago maydis 521 hypothetical protein UM02065.1/histone deacetylase Hda1 /hypothetical protein UM02065.1
3549
NP_595333 Schizosaccharomyces pombe 972h- O59702 Schizosaccharomyces pombe CAA19053 AAD05211 histone deacetylase/CLR6_SCHPO Histone deacetylase clr6 (Cryptic loci regulator 6) /SPBC36.05c /putative histone deacetylase
XP_757499 Ustilago maydis 521 CAC19454 Ustilago maydis EAK81855 Ustilago maydis 521 hypothetical protein UM01352.1/histone deacetylase /hypothetical protein UM01352.1
5747
XP_316539 Anopheles gambiae str. PEST EAA11382 ENSANGP00000004321/ENSANGP00000004321
XP_394976 Apis mellifera PREDICTED: similar to ENSANGP00000004321
49
NP_647918 Drosophila melanogaster Q94517 AAC61494 AAF47924 AAL13716 Rpd3 CG7471-PA/HDAC1_DROME Histone deacetylase Rpd3 (HD) (dRPD3)/putative histone deacetylase /CG7471-PA /GM14158p
CAA70455 Drosophila melanogaster AAC23917 histone deacetylase/putative histone deacetylase HDAC1
73
EAL30147 Drosophila pseudoobscura GA20378-PA
99100
P56517 Gallus gallus AAB96923 AAB99850 AAC00504 HDAC1_CHICK Histone deacetylase 1 (HD1)/histone deacetylase-1; HD-1 /histone deacetylase 1 /erythrocyte histone deacetylase
NP_001020580 Rattus norvegicus NP_001032521 Bos taurus NP_032254 Mus musculus XP_544435 Canis familiaris XP_513092 Pan troglodytes XP_519834 XP_864716 Canis familiaris O09106 Mus musculus CAA66870 AAB68398 AAP36140 synthetic construct AA
XP_930837 Mus musculus PREDICTED: skip
BAA08909 Homo sapiens AAX36503 synthetic construct RPD3 protein/histone deacetylase 1
XP_576595 Rattus norvegicus PREDICTED: histone deacetylase 1
38345983
NP_001025564 Xenopus tropicalis AAH90604 hdac1_predicted-prov protein/Hdac1_predicted-prov protein
O42227 Xenopus laevis AAC60346 AAH41296 HDA1B_XENLA Probable histone deacetylase 1-B (HD1) (RPD3 homolog)/deacetylase /MGC53583 protein
Q91695 Xenopus laevis CAA55211 AAH81136 HDA1A_XENLA Probable histone deacetylase 1-A (HD1) (Maternally-expressed histone deacetylase) (HDM) (AB21)/yeast RPD3 homologue /AB21 protein
4068
AAH64650 Danio rerio AAH85375 Hdac1 protein/Histone deacetylase 1
NP_775343 Danio rerio AAM34645 histone deacetylase 1/histone deaceytlase 1
92
AAL89665 Takifugu rubripes histone deacetylase
CAG09908 Tetraodon nigroviridis unnamed protein product
46281030
CAF93492 Tetraodon nigroviridis unnamed protein product
49
XP_532270 Canis familiaris XP_518700 Pan troglodytes XP_342150 Rattus norvegicus NP_032255 Mus musculus NP_001005432 Xenopus tropicalis NP_990162 Gallus gallus P56519 Q92769 Homo sapiens AAB96924 Gallus gallus AAH74509 Xenopus tropicali
AAH54208 Xenopus laevis Hdac2 protein
XP_869380 Bos taurus PREDICTED: similar to Histone deacetylase 2 (HD2) isoform 2
XP_878224 Bos taurus XP_878030 PREDICTED: similar to Histone deacetylase 2 (HD2) isoform 10/PREDICTED: similar to Histone deacetylase 2 (HD2) isoform 8
XP_877431 Bos taurus PREDICTED: similar to Histone deacetylase 2 (HD2) isoform 4
561005341
NP_001518 Homo sapiens AAC50814 histone deacetylase 2/transcriptional regulator homolog RPD3
18
AAX29896 synthetic construct AAH31055 Homo sapiens histone deacetylase 2/HDAC2 protein
41
P70288 Mus musculus AAC52889 HDAC2_MOUSE Histone deacetylase 2 (HD2) (YY1 transcription factor-binding protein)/transcriptional regulator homolog RPD3
7080
NP_999711 Strongylocentrotus purpuratus XP_798972 P56518 AAB87685 histone deacetylase/PREDICTED: similar to histone deacetylase 1 /HDAC1_STRPU Histone deacetylase 1 (HD1)/histone deacetylase
5359
CAE71712 Caenorhabditis briggsae Hypothetical protein CBG18689
NP_493026 Caenorhabditis elegans CAB03224 CAB03240 Histone DeAcetylase family member (hda-3)/Hypothetical protein R06C1.1 /Hypothetical protein R06C1.1
100
XP_771229 Giardia lamblia ATCC 50803 EAA41057 AAU89077 Giardia intestinalis histone deacetylase/GLP_447_26594_25191 /histone deacetylase HDAC
122
NP_506599 Caenorhabditis elegans O17695 CAB03984 Histone DeAcetylase family member (hda-1)/HDA1_CAEEL Histone deacetylase 1 /Hypothetical protein C53A5.3
CAE60876 Caenorhabditis briggsae Hypothetical protein CBG04588
100
CAE64376 Caenorhabditis briggsae Hypothetical protein CBG09063
81
XP_572517 Cryptococcus neoformans var. neoformans JEC21 EAL18739 Cryptococcus neoformans var. neoformans B-3501A AAW45210 Cryptococcus neoformans var. neoformans JEC21 histone deacetylase 1 (hd1)/hypothetical protein CNBI3250 /histone deacetylase
XP_569971 Cryptococcus neoformans var. neoformans JEC21 EAL21815 Cryptococcus neoformans var. neoformans B-3501A AAW42664 Cryptococcus neoformans var. neoformans JEC21 histone deacetylase 1-1 (hd1)/hypothetical protein CNBC5170 /histone deacetyla
84
CAE69339 Caenorhabditis briggsae Hypothetical protein CBG15416
4237
gnl|CMER|CMJ129C_histone_deacetylase
Smo_HDA6_3_2
Ppa_HDA6_1_1 Ppa_HDA6_7_1
ABA91949 Oryza sativa (japonica cultivar-group) Histone deacetylase family, putative
3918
AT4G38130 = NP_195526 O22446 AAB66486 CAB37553 CAB80478 AAG28474 AAM13152 AAP68312 HD1; histone deacetylase/HDAC_ARATH Histone deacetylase (HD)/histone deacetylase /Histone deacetylase /Histone deacetylase /putative histone deacetylase /histone deac
AAF82385 Mesembryanthemum crystallinum histone deacetylase
48
P56521 Zea mays AAC50038 AAK67142 HDAC_MAIZE Probable histone deacetylase (RPD3 homolog)/putative histone deacetylase RPD3 /histone deacetylase HDA101
AAP47171 Oryza sativa (japonica cultivar-group) BAD68730 BAD68731 histone deacetylase HDAC1/histone deacetylase HDAC1 /putative histone deacetylase HDAC1
6980
XP_464641 Oryza sativa (japonica cultivar-group) XP_464643 XP_464638 AAP47172 AAP47173 BAD17681 BAD17683 BAD25048 BAD25051 BAD25053 putative histone deacetylase HDAC3/putative histone deacetylase HDAC3 /histone deacetylase HDAC3 /histone deacetylase
AAK01712 Oryza sativa (indica cultivar-group) histone deacetylase HD1
1003351
AT5G35600 = NP_198410 BAB09994 AAM49768 histone deacetylase/histone deacetylase /HDA7
AAD10139 Zea mays AAL33653 histone deacetylase/histone deacetylase
XP_481792 Oryza sativa (japonica cultivar-group) BAD03280 putative histone deacetylase/putative histone deacetylase
44
AAU82113 Triticum aestivum histone deacetylase
100
AAG28475 Arabidopsis thaliana putative histone deacetylase
AT5G63110 = NP_201116 BAB10553 AAL60022 AAM65853 AAN13198 HDA6 (HISTONE DEACETYLASE 6); histone deacetylase/histone deacetylase /putative histone deacetylase /histone deacetylase /putative histone deacetylase
10083761541001418425291438100
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