query gene name (CHR24_a): global / partial tree
File name:
94 aa residues 65 OTU included.
Results of partial trees included / Partial tree including Ppa.
Assemble Job Id:
Tree job id: qOG7Vh
BP values out of 100
Analyzed by yoguri@nibb.ac.jp
Date: Tue May 09 18:23:23 JST 2006
gnl|CMER|CMQ363C_SWI/SNF_related,_matrix_associated,_actin_dependent_regulator_of_chromatin,_subfamily_a
Ppa_CHR24_25_1
40
gnl|CMER|CMJ200C_SWI/SNF_related,_matrix_associated,_actin_dependent_regulator_of_chromatin,_subfamily_a
86
NP_744295 Pseudomonas putida KT2440 ZP_00901959 Pseudomonas putida F1 AAN67759 Pseudomonas putida KT2440 EAP48896 Pseu
NP_791922 Pseudomonas syringae pv. tomato str. DC3000 YP_274080 Pseudomonas syringae pv. phaseolicola 1448A AAO55617 Pse
YP_234976 Pseudomonas syringae pv. syringae B728a AAY36938 SNF2-related:Helicase, C-terminal:SWIM Zn-finger/SNF2-related:H
100
YP_259071 Pseudomonas fluorescens Pf-5 AAY91239 helicase/SNF2 family domain protein /helicase/SNF2 family domain protein
7994
ZP_00278580 Burkholderia xenovorans LB400 COG0553: Superfamily II DNA/RNA helicases, SNF2 family
ZP_00396247 Deinococcus geothermalis DSM 11300 EAL83055 SNF2-related:Helicase, C-terminal/SNF2-related:Helicase, C-termina
77100
YP_011298 Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough AAS96558 Snf2 family protein/Snf2 family protein
98
XP_421689 Gallus gallus PREDICTED: similar to TBP-associated factor 172 (TAF-172) (TAF(II)170)
XP_543929 Canis familiaris NP_003963 Homo sapiens XP_906126 Mus musculus XP_929946 XP_929937 XP_129248 XP_906118 XP_922
99
NP_984605 Eremothecium gossypii AAS52429 Ashbya gossypii ATCC 10895 AEL256Cp/AEL256Cp
XP_455023 Kluyveromyces lactis NRRL Y-1140 CAH00110 unnamed protein product/unnamed protein product
93
XP_712896 Candida albicans SC5314 XP_712928 EAK93728 EAK93762 hypothetical protein CaO19.11978/hypothetical protein CaO19.
100
XP_506078 Yarrowia lipolytica CLIB122 CAG78891 hypothetical protein/unnamed protein product
45
XP_570982 Cryptococcus neoformans var. neoformans JEC21 EAL20552 Cryptococcus neoformans var. neoformans B-3501A AAW43675
6838
XP_321235 Anopheles gambiae str. PEST EAA01172 ENSANGP00000008413/ENSANGP00000008413
NP_732097 Drosophila melanogaster AAF55260 AAN71681 AAO39617 AAB95091 Helicase 89B CG4261-PA/CG4261-PA /SD16865p /GH12153p
EAL28421 Drosophila pseudoobscura GA18064-PA
1009660
XP_656243 Entamoeba histolytica HM-1:IMSS EAL50858 SNF2 family protein/SNF2 family protein
100
AAF73858 Mus musculus putative repair and recombination helicase RAD26L
NP_001010895 Homo sapiens XP_528720 Pan troglodytes CAI16517 Homo sapiens RAD26L hypothetical protein/PREDICTED: simil
57
XP_533502 Canis familiaris PREDICTED: similar to RAD26L hypothetical protein
100
XP_722322 Candida albicans SC5314 XP_722208 EAL03441 EAL03565 hypothetical protein CaO19_12471/hypothetical protein CaO19_
18
XP_649509 Entamoeba histolytica HM-1:IMSS EAL44123 DNA repair and recombination protein RAD26/DNA repair and recombination
XP_807298 Trypanosoma cruzi strain CL Brener XP_807766 EAN85447 Trypanosoma cruzi EAN85915 DNA excision repair protein/D
XP_824886 Trypanosoma brucei TREU927 AAX70681 Trypanosoma brucei AAZ12472 DNA excision repair protein/DNA excision repai
10054
XP_955594 Encephalitozoon cuniculi GB-M1 CAD27013 DNA repair and recombination protein/RAD26-LIKE DNA REPAIR AND RECOMBINA
gnl|CMER|CMO092C_DNA_repair_and_recombination_protein_RAD26
XP_549820 Oryza sativa (japonica cultivar-group) BAB62641 BAB92143 BAD04853 BAD45511 putative RAD26/putative DNA repair an
Smo_CHR24_6_1
Ppa_CHR24_6_1
6068
2231_Cre
72
XP_640679 Dictyostelium discoideum AX4 EAL66702 Dictyostelium discoideum hypothetical protein DDB0205584/hypothetical pr
58
XP_501912 Yarrowia lipolytica CLIB122 CAG82232 hypothetical protein/unnamed protein product
XP_459783 Debaryomyces hansenii CBS767 CAG88022 hypothetical protein DEHA0E11528g/unnamed protein product
XP_714194 Candida albicans SC5314 XP_714234 EAK95111 EAK95157 hypothetical protein CaO19.8240/hypothetical protein CaO19.6
9622
XP_454975 Kluyveromyces lactis NRRL Y-1140 CAH00062 unnamed protein product/unnamed protein product
NP_012569 Saccharomyces cerevisiae P40352 AAA34655 CAA57290 CAA89562 Protein involved in transcription-coupled repair nucl
8536
XP_664707 Aspergillus nidulans FGSC A4 EAA61308 hypothetical protein AN7103.2/hypothetical protein AN7103.2
BAE64858 Aspergillus oryzae unnamed protein product
97
XP_382716 Gibberella zeae PH-1 EAA67770 hypothetical protein FG02540.1/hypothetical protein FG02540.1
5184
CAG09381 Tetraodon nigroviridis unnamed protein product
XP_421656 Gallus gallus PREDICTED: similar to DNA excision repair protein ERCC-6 (Cockayne syndrome protein CSB)
XP_534944 Canis familiaris PREDICTED: similar to DNA excision repair protein ERCC-6 (Cockayne syndrome protein CSB)
67
NP_000115 Homo sapiens Q03468 AAA52397 AAO13487 CAH70291 excision repair cross-complementing rodent repair deficiency, com
52
XP_224627 Rattus norvegicus PREDICTED: similar to DNA excision repair protein ERCC-6 (Cockayne syndrome protein CSB)
XP_484360 Mus musculus XP_917558 PREDICTED: excision repair cross-complementing rodent repair deficiency, complementation
5185100456049256713
XP_649054 Entamoeba histolytica HM-1:IMSS EAL43665 helicase/helicase, putative
XP_814373 Trypanosoma cruzi strain CL Brener EAN92522 Trypanosoma cruzi DNA excision/repair protein SNF2 /DNA excision/r
XP_815423 Trypanosoma cruzi strain CL Brener EAN93572 Trypanosoma cruzi DNA excision/repair protein SNF2 /DNA excision/r
100
NP_047049 Leishmania major strain Friedlin AAC24634 DNA excision/repair protein /DNA excision/repair protein SNF2, putativ
96
NP_666347 Mus musculus AAH37660 BAC26244 AAN87172 excision repair cross-complementing rodent repair deficiency complementa
XP_228546 Rattus norvegicus PREDICTED: similar to SNF2/RAD54 family protein
69
XP_521130 Pan troglodytes NP_060139 Homo sapiens NP_001009954 AAI11487 PREDICTED: similar to SNF2/RAD54 family protein /
XP_549075 Canis familiaris PREDICTED: similar to excision repair cross-complementing rodent repair deficiency complementat
75100
10904_Cre
Smo_CHR24_13_1 Smo_CHR24_1_1
Smo_CHR24_17_1
Smo_CHR24_23_1
100100
Ppa_CHR24_10_1
Ppa_CHR24_3_1
10053
XP_474485 Oryza sativa (japonica cultivar-group) CAE05788 OSJNBb0020J19.17/OSJNBb0020J19.17
AT5G63950 = NP_201200 BAA96898 AAL58917 AAM98274 ATP binding/ATP-dependent helicase/DNA binding /helicase/nucleic acid bi
9553586369653937
0.100