query gene name (ATSWI3C.njtree2): global / partial tree
File name:
165 aa residues 52 OTU included.
Results of partial trees included / Partial tree including Ppa.
Assemble Job Id:
Tree job id: Q3d5Gq
BP values out of 100
Analyzed by tomoakin@kenroku.kanazawa-u.ac.jp
Date: Tue Apr 10 21:42:56 JST 2007
XP_642866 Dictyostelium discoideum AX4 AAS38666 Dictyostelium discoideum EAL69018 SWIRM domain containing protein/similar to Homo sapiens (Human). similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c,
XP_636792 Dictyostelium discoideum AX4 EAL63285 Dictyostelium discoideum hypothetical protein DDB0220513/myb domain-containing protein
61
XP_571052 Cryptococcus neoformans var. neoformans JEC21 EAL20480 Cryptococcus neoformans var. neoformans B-3501A AAW43745 Cryptococcus neoformans var. neoformans JEC21 chromatin remodeling-related protein/hypothetical protein CNBE4010 /chromatin
XP_760003 Ustilago maydis 521 EAK84762 hypothetical protein UM03856.1/hypothetical protein UM03856.1
87
BAE55482 Aspergillus oryzae unnamed protein product
XP_748958 Aspergillus fumigatus Af293 EAL86920 RSC complex subunit RSC8/RSC complex subunit (RSC8), putative
89
XP_664309 Aspergillus nidulans FGSC A4 EAA58523 hypothetical protein AN6705.2/hypothetical protein AN6705.2
100
XP_382101 Gibberella zeae PH-1 EAA68683 hypothetical protein FG01925.1/hypothetical protein FG01925.1
EAQ87930 Chaetomium globosum CBS 148.51 hypothetical protein CHGG_04549
74
XP_328709 Neurospora crassa XP_962673 Neurospora crassa N150 EAA33437 Neurospora crassa CAE85526 hypothetical protein/hypothetical protein /hypothetical protein /related to nucleosome remodeling complex subunit RSC8
1009937
NP_593800 Schizosaccharomyces pombe 972h- O14470 Schizosaccharomyces pombe CAB16236 hypothetical protein SPAC23H3.10/YEPA_SCHPO Putative chromatin regulator protein C23H3.10/SPAC23H3.10
NP_594257 Schizosaccharomyces pombe 972h- CAB16221 Schizosaccharomyces pombe hypothetical protein SPAC17G6.10/SPAC17G6.10
2226
XP_460717 Debaryomyces hansenii CBS767 CAG89057 hypothetical protein DEHA0F09097g/unnamed protein product
XP_712883 Candida albicans SC5314 XP_712915 EAK93714 EAK93748 RNA polymerase II transcription factor/RNA polymerase II transcription factor /hypothetical protein CaO19.11964 /hypothetical protein CaO19.4488
100
NP_012359 Saccharomyces cerevisiae P32591 CAA40112 AAA35136 CAA89470 One of 11 subunits of the SWI/SNF chromatin remodeling complex that regulates transcription by remodeling chromosomes; required for transcription of many genes, including ADH1, ADH2
XP_449835 Candida glabrata CBS 138 CAG62815 hypothetical protein CAGL0M11374g/unnamed protein product
97
NP_984726 Eremothecium gossypii AAS52550 Ashbya gossypii ATCC 10895 AEL135Cp/AEL135Cp
10010041
EAR84927 Tetrahymena thermophila SB210 SWIRM domain containing protein
XP_793076 Strongylocentrotus purpuratus PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin c2 isoform a, partial
NP_507906 Caenorhabditis elegans CAB54337 AAG16654 Phasmid Socket Absent family member (psa-1)/Hypothetical protein Y113G7B.23 /SWI3-like protein; PSA-1
CAE67424 Caenorhabditis briggsae Hypothetical protein CBG12912
100
EAL28420 Drosophila pseudoobscura GA15060-PA
AAD12718 Drosophila melanogaster moira
NP_524373 Drosophila melanogaster T13153 AAC28454 AAM49864 AAF55259 moira CG18740-PA/T13153 brahma associated protein 155K - fruit fly (Drosophila melanogaster)/brahma associated protein 155 kDa /LD06146p /CG18740-PA
68100
XP_393008 Apis mellifera PREDICTED: similar to ENSANGP00000027316
57
CAF91121 Tetraodon nigroviridis unnamed protein product
AAH72147 Xenopus laevis MGC80068 protein
AAC50694 Homo sapiens SWI/SNF complex 170 KDa subunit
54
XP_538228 Canis familiaris XP_585948 Bos taurus NP_937803 Mus musculus NP_620706 Homo sapiens NP_003066 Q8TAQ2 Q6PDG5 Mus musculus AAH13045 Homo sapiens AAH26222 AAP36238 synthetic construct AAP88926 Homo sapiens AAH58720 Mus musculus
90
XP_686321 Danio rerio PREDICTED: similar to Smarcc1 protein
AAH47827 Danio rerio Smarcc1 protein
99
AAH44014 Xenopus laevis Smarcc1-prov protein
XP_418483 Gallus gallus PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin c1; mammalian chromatin remodeling complex BRG1-associated factor 155; SWI/SNF complex 155 kDa subunit; chromatin remodeling comple
NP_003065 Homo sapiens SWI/SNF-related matrix-associated actin-dependent regulator of chromatin c1
AAC50693 Homo sapiens SWI/SNF complex 155 KDa subunit
84
XP_533845 Canis familiaris XP_236644 Rattus norvegicus P97496 Mus musculus Q92922 Homo sapiens AAH39843 AAH52423 Mus musculus AAH53064 AAH65253 Homo sapiens AAH50564 BAE25713 Mus musculus BAE25978 BAE25395 PREDICTED: similar to SWI/SNF-re
NP_033237 Mus musculus AAB42085 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 /SRG3
1156747967339532191002673
gnl|CMER|CML061C_SWI/SNF_related,_matrix_associated,_actin_dependent_regulator_of_chromatin,_subfamily_c gnl|CMER|CMM233C_SWI/SNF_related,_matrix_associated,_actin_dependent_regulator_of_chromatin,_subfamily_c
Ppa_ATSWI3C_19_1
XP_472904 Oryza sativa (japonica cultivar-group) CAE05892 OSJNBa0044K18.33/OSJNBa0044K18.33
AT2G47620 = NP_850476 AAL32872 AAM10132 ATSWI3A; DNA binding/putative SWI/SNF family transcription activator /putative SWI/SNF family transcription activator
10075
AT2G33610 = NP_180919 AAB80676 AAO42112 AAO50627 ATSWI3B; DNA binding/putative SWI/SNF complex subunit SW13 /putative SWI/SNF complex subunit SW13 /putative SWI/SNF complex subunit SW13
100
AT1G21700 = NP_173589 AAD41423 AAM13847 AAM51320 CHB4; DNA binding/Contains similarity to gb|AF033823 moira protein from Drosophila melanogaster and contains a PF|00249 Myb-like DNA-binding domain. EST gb|Z25609 comes from this gene. /putative tran
AAX95027 Oryza sativa (japonica cultivar-group) ABA91812 hypothetical protein LOC_Os11g08080/F8K7.13 protein
ABA96607 Oryza sativa (japonica cultivar-group) hypothetical protein LOC_Os12g07730
100100
Ppa_ATSWI3C_24_1
Ppa_ATSWI3C_205_1
100
Ppa_ATSWI3C_42_1
81
Smo_ATSWI3C_22_1 Smo_ATSWI3C_23_1
XP_471007 Oryza sativa (japonica cultivar-group) CAE01777 OSJNBa0027H06.15/OSJNBa0027H06.15
AAX95696 Oryza sativa (japonica cultivar-group) Myb-like DNA-binding domain, putative
100
AT4G34430 = NP_849563 NP_849564 NP_195169 NP_974682 Q8VY05 AAL67003 AAM20094 BAC41956 ATSWI3C; DNA binding/transcription factor/zinc ion binding /ATSWI3C; DNA binding /transcription factor/zinc ion binding /ATSWI3C; DNA binding /transcription factor
10034401008739
0.100