query gene name (PAL1.200pt1): global / partial tree
File name:
174 aa residues 138 OTU included.
Results of partial trees included / Partial tree including Ppa.
Assemble Job Id:
Tree job id: MfxiPO
BP values out of 100
Analyzed by ku-bo@nibb.ac.jp
Date: Tue Dec 26 10:29:42 JST 2006
P10248 Rhodotorula mucilaginosa CAA31486 PALY_RHORB Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
1314202A Rhodosporidium toruloides P11544 CAA35886 AAA33883 CAA31209 1314202A Phe ammonia lyase/PALY_RHOTO Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase /phenylalanine ammonia-lyase/L-phenylalanine ammonia-lyase
100
BAE55583 Aspergillus oryzae unnamed protein product
XP_958734 Neurospora crassa N150 XP_332083 Neurospora crassa EAA29498 hypothetical protein/hypothetical protein /hypothetical protein
38
XP_755245 Aspergillus fumigatus Af293 EAL93207 phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
95
AAU01182 Taxus wallichiana var. chinensis AAU01183 AAU01184 Taxus x media phenylalanine aminomutase/phenylalanine aminomutase /phenylalanine aminomutase
AAT47186 Taxus canadensis AAU01185 phenylalanine aminomutase/phenylalanine aminomutase
AAX20146 Taxus x media phenylalanine aminomutase
50100
AAO73468 Ginkgo biloba phenylalanine ammonia-lyase
100
Smo_PAL1_5_1
ABA98757 Oryza sativa (japonica cultivar-group) phenylalanine ammonia-lyase
AAX95429 Oryza sativa (japonica cultivar-group) ABA95540 phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
100
Smo_PAL1_12_1
Smo_PAL1_11_1 Smo_PAL1_9_1
100
AAW80638 Selaginella kraussiana phenylalanine ammonia lyase
50
AAW80637 Isoetes lacustris phenylalanine ammonia lyase
AAW80642 Ophioglossum reticulatum phenylalanine ammonia lyase
AAW80639 Equisetum arvense phenylalanine ammonia lyase
34
AAW80643 Blechnum spicant phenylalanine ammonia lyase
50
AAW80645 Pellia epiphylla phenylalanine ammonia lyase
9927
Ppa_PAL1_6_1
Ppa_PAL1_1_1
80
Ppa_PAL1_9_1
37
Ppa_PAL1_5_1
Ppa_PAL1_11_1
Ppa_PAL1_10_1
Ppa_PAL1_3_1
1721
Ppa_PAL1_7_1 Ppa_PAL1_8_1
2543
Ppa_PAL1_13_1 Ppa_PAL1_2_1
10052
Ppa_PAL1_14_1
5010
AAW51924 Rhizophora mangle phenylalanine ammonia-lyase
6
P52777 Pinus taeda AAA84889 PALY_PINTA Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
AAL74331 Pinus sylvestris phenylalanine ammonia-lyase
69
AAL74317 Pinus sylvestris AAL74318 AAL74319 AAL74320 AAL74321 AAL74322 AAL74323 AAL74324 AAL74325 AAL74326 AAL74327 AAL74328 AAL74329 AAL74330 AAL74332 AAL74333 AAL74334 AAL74335 AAL74336 phenylalanine ammonia-lyase/phenylalanine ammonia-lyase /pheny
96
AAT66434 Pinus pinaster phenylalanine ammonia lyase
94
AAT65681 Ginkgo biloba phenylalanine ammonia-lyase
77
AAP85250 Pinus pinaster AAP85251 phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
9411
AAW80640 Psilotum nudum phenylalanine ammonia lyase
AAW80641 Botrychium virginianum phenylalanine ammonia lyase
9715
AAW80636 Lycopodium tristachyum phenylalanine ammonia lyase
AAW80635 Huperzia lucidula phenylalanine ammonia lyase
67
AAW80644 Pteridium aquilinum phenylalanine ammonia lyase
5027
XP_473196 Oryza sativa (japonica cultivar-group) CAE05623 CAE05458 OSJNBa0073E02.18/OSJNBb0061C13.5 /OSJNBa0073E02.18
CAA89007 Hordeum vulgare subsp. vulgare phenylalanine ammonia-lyase
CAA89005 Hordeum vulgare subsp. vulgare phenylalanine ammonia-lyase
3827
Q43210 Triticum aestivum CAA68036 PALY_WHEAT Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
46
XP_466849 Oryza sativa (japonica cultivar-group) BAD23155 putative phenylalanine ammonia-lyase/putative phenylalanine ammonia-lyase
P53443 Oryza sativa CAA61198 Oryza sativa (indica cultivar-group) PAL2_ORYSA Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
74
XP_475254 Oryza sativa (japonica cultivar-group) AAS90660 AAV25018 putative phenylalanine ammonia-lyase (EC 4.3.1.5)/putative phenylalanine ammonia-lyase (EC 4.3.1.5) /putative phenylalanine ammonia-lyase
3616
XP_466846 Oryza sativa (japonica cultivar-group) BAD23152 putative phenylalanine ammonia-lyase/putative phenylalanine ammonia-lyase
13
AAR24505 Dendrocalamopsis oldhamii phenylalanine ammonia-lyase
39
XP_466845 Oryza sativa (japonica cultivar-group) BAD23151 putative phenylalanine ammonia-lyase/putative phenylalanine ammonia-lyase
AAG02280 Triticum aestivum inducible phenylalanine ammonia-lyase
2354
XP_466843 Oryza sativa (japonica cultivar-group) BAD23794 BAD23149 putative phenylalanine ammonia-lyase/putative phenylalanine ammonia-lyase /putative phenylalanine ammonia-lyase
S06475 Oryza sativa P14717 CAA34226 Oryza sativa (japonica cultivar-group) S06475 phenylalanine ammonia-lyase (EC 4.3.1.5) - rice/PAL1_ORYSA Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
65
AAX97448 Bambusa ventricosa putative phenylalanine ammonia-lyase
60
AAL40137 Zea mays phenylalanine ammonia-lyase
52
XP_473192 Oryza sativa (japonica cultivar-group) AAO72666 CAE05619 CAE05454 OSJNBa0073E02.14/phenylalanine ammonia-lyase /OSJNBb0061C13.1 /OSJNBa0073E02.14
CAA89006 Hordeum vulgare subsp. vulgare phenylalanine ammonia-lyase
5410015
Q42609 Bromheadia finlaysoniana CAA68256 PALY_BROFI Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
AAS48415 Allium cepa phenylalanine lyase
38
AAP34199 Phalaenopsis x Doritaenopsis hybrid cultivar phenylalanine ammonia-lyase
68
P45727 Persea americana AAA51873 PALY_PERAE Phenylalanine ammonia-lyase/phenylalanine ammonia lyase
1W27 Petroselinum crispum 1W27 P24481 CAA34715 CAA68938 BAC56977 Daucus carota B Chain B, Phenylalanine Ammonia-Lyase (Pal) From Petroselinum Crispum/A Chain A, Phenylalanine Ammonia-Lyase (Pal) From Petroselinum Crispum/PAL1_PETCR Phenylalanine amm
P45729 Petroselinum crispum CAA57057 PAL3_PETCR Phenylalanine ammonia-lyase 3/phenylalanine ammonia-lyase 3
P45728 Petroselinum crispum CAA57056 PAL2_PETCR Phenylalanine ammonia-lyase 2/phenylalanine ammonia-lyase 2
4165
O23865 Daucus carota BAA23367 PAL1_DAUCA Phenylalanine ammonia-lyase 1/phenylalanine ammonia-lyase
70
AAW78932 Rhodiola sachalinensis phenylalanine-ammonia lyase
28
CAB42793 Citrus clementina x Citrus reticulata phenylalanine-ammonia lyase
CAB42794 Citrus clementina x Citrus reticulata phenylalanine-ammonia lyase
58
JQ2265 Populus trichocarpa x Populus deltoides P45730 Populus trichocarpa AAA33805 Populus trichocarpa x Populus deltoides JQ2265 phenylalanine ammonia-lyase (EC 4.3.1.5) - western balsam poplar x cottonwood/PALY_POPTR Phenylalanine ammonia-ly
BAA21643 Populus kitakamiensis AAN52279 Populus tremuloides phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
81
AAK60275 Manihot esculenta phenylalanine ammonia-lyase 2
P19142 Phaseolus vulgaris 1807329A PAL2_PHAVU Phenylalanine ammonia-lyase class II/1807329A Phe ammonia lyase
39
P27991 Glycine max CAA37129 PAL1_SOYBN Phenylalanine ammonia-lyase 1/phenylalanine ammonia-lyase
A24727 Phaseolus vulgaris P07218 1111326A AAA33770 A24727 phenylalanine ammonia-lyase (EC 4.3.1.5) - kidney bean (fragment)/PAL1_PHAVU Phenylalanine ammonia-lyase class I/1111326A ammonia lyase,Phe/phenylalanine ammonia-lyase (EC 4.3.1.5)
73116
P45734 Trifolium subterraneum 2006271A AAA17993 PALY_TRISU Phenylalanine ammonia-lyase/2006271A Phe ammonia lyase/phenylalanine ammonia-lyase
2001451A Pisum sativum 2001451A Phe ammonia lyase
35
Q01861 Pisum sativum Q04593 BAA00885 BAA00886 BAA00887 PAL1_PEA Phenylalanine ammonia-lyase 1/PAL2_PEA Phenylalanine ammonia-lyase 2 /phenylalanine ammonia-lyase /phenylalanine ammonia-lyase /phenylalanine ammonia-lyase
73
BAE71252 Trifolium pratense putative phenylalanine ammonia lyase
19
AAX84839 Astragalus membranaceus var. mongholicus phenylalanine ammonia-lyase
14
P45732 Stylosanthes humilis AAA99500 PALY_STYHU Phenylalanine ammonia-lyase/phenylalanine ammonia lyase
P27990 Medicago sativa CAA41169 PALY_MEDSA Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
71
AAZ79663 Fagus sylvatica putative phenylalanine ammonia-lyase
206
CAA53733 Cucumis melo phenylanaline ammonia-lyase
0
O64963 Prunus avium AAC78457 PAL1_PRUAV Phenylalanine ammonia-lyase 1/phenylalanine ammonia-lyase; PAL1
AAX18625 Nerium oleander phenylalanine ammonia-lyase
25
AAX18626 Pittosporum tobira phenylalanine ammonia-lyase
9
AAF40224 Rubus idaeus AAG22550 phenylalanine ammonia-lyase 2/phenylalanine ammonia-lyase 2
P45726 Camellia sinensis BAA05643 AAU08174 PALY_CAMSI Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase /phenylalanine ammonia-lyase
250
AAN32866 Coffea canephora AAN32867 AAZ04477 phenylalanine ammonia-lyase 1/phenylalanine ammonia-lyase 2 /phenylalanine ammonia-lyase
AAK60274 Manihot esculenta AAK62030 phenylalanine ammonia-lyase 1/phenylalanine ammonia-lyase 1
AAD45384 Vigna unguiculata phenylalanine ammonia-lyase
16
AAY82486 Ulmus pumila phenylalanine ammonia-lyase
AAY82485 Ulmus americana phenylalanine ammonia-lyase
9518
AAQ74878 Populus trichocarpa x Populus deltoides phenylalanine ammonia lyase
Q43052 Populus kitakamiensis S60042 Populus sieboldii x Populus grandidentata BAA07860 Populus kitakamiensis PAL2_POPKI Phenylalanine ammonia-lyase G2B/S60042 phenylalanine ammonia-lyase (EC 4.3.1.5) 2b - Japanese aspen x large-toothed aspen /ph
P45731 Populus kitakamiensis BAA06337 PAL1_POPKI Phenylalanine ammonia-lyase G1/phenylalanine ammonia-lyase
4569
AAN52280 Populus tremuloides phenylalanine ammonia-lyase
Q40910 Populus kitakamiensis BAA07861 PAL4_POPKI Phenylalanine ammonia-lyase G4/phenylalanine ammonia-lyase
78
S60043 Populus sieboldii x Populus grandidentata S60043 phenylalanine ammonia-lyase (EC 4.3.1.5) 4 - Japanese aspen x large-toothed aspen (fragment)
8449
AAR31107 Quercus suber phenylalanine ammonia-lyase
Q9SMK9 Cicer arietinum CAB60719 PAL2_CICAR Phenylalanine ammonia-lyase 2/phenylalanine ammonia-lyase
AAX18624 Juglans regia phenylalanine ammonia-lyase
44
AAX18752 Styphnolobium japonicum phenylalanine ammonia-lyase
381215
P25872 Nicotiana tabacum AAA34122 BAA22948 PAL1_TOBAC Phenylalanine ammonia-lyase/phenylalanine ammonia lyase /phenylalanine ammonia-lyase
AAG49585 Ipomoea nil phenylalanine ammonia-lyase
P14166 Ipomoea batatas AAA33389 PAL1_IPOBA Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
94
Q42858 Ipomoea batatas BAA11459 PAL2_IPOBA Phenylalanine ammonia-lyase/Phenylalanine Ammonia-Lyase
44
P45733 Nicotiana tabacum CAA55075 PAL3_TOBAC Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
P35513 Nicotiana tabacum BAA22947 BAA22963 PAL2_TOBAC Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase /phenylalanine ammonia-lyase
741125
P26600 Lycopersicon esculentum AAA34176 PAL5_LYCES Phenylalanine ammonia-lyase (PAL)/phenylalanine ammonia-lyase
A44133 Lycopersicon esculentum A44133 phenylalanine ammonia-lyase (EC 4.3.1.5) - tomato
82
AAV98199 Petunia x hybrida phenylalanine ammonialyase 1
5
P35511 Lycopersicon esculentum AAA34179 PAL1_LYCES Phenylalanine ammonia-lyase (PAL)/phenylalanine ammonia lyase
8
P31425 Solanum tuberosum P31426 PAL1_SOLTU Phenylalanine ammonia-lyase 1/PAL2_SOLTU Phenylalanine ammonia-lyase 2
39
AAC33966 Capsicum chinense phenylalanine ammonia-lyase
1228
O49835 Lithospermum erythrorhizon BAA24928 PAL1_LITER Phenylalanine ammonia-lyase 1 (PAL-1)/phenylalanine ammonia-lyase
O49836 Lithospermum erythrorhizon BAA24929 PAL2_LITER Phenylalanine ammonia-lyase 2 (PAL-2)/phenylalanine ammonia-lyase
57
Q9M568 Rubus idaeus AAF40223 PAL1_RUBID Phenylalanine ammonia-lyase 1 (RiPAL1)/phenylalanine ammonia-lyase 1
AAG22549 Rubus idaeus phenylalanine ammonia-lyase 1
100127
AT3G10340 = NP_187645 Q9SS45 AAF02809 AAM20508 AAN15571 AAP59440 ammonia ligase/ammonia-lyase /PAL4_ARATH Phenylalanine ammonia-lyase 4/putative phenylalanine ammonia-lyase /putative phenylalanine ammonia-lyase /putative phenylalanine ammonia-lyase
AT5G04230 = NP_196043 P45725 S52992 AAA69905 CAC05505 AAS18574 PAL3 (PHENYL ALANINE AMMONIA-LYASE 3); phenylalanine ammonia-lyase/PAL3_ARATH Phenylalanine ammonia-lyase 3/S52992 phenylalanine ammonia-lyase (EC 4.3.1.5) 3 - Arabidopsis thaliana /PAL3
642
BAA95629 Catharanthus roseus phenylalanine ammonia lyase
AAL55242 Lactuca sativa AAO13347 phenylalanine ammonia-lyase/phenylalanine ammonia-lyase2; PAL
O04058 Helianthus annuus CAA73065 PALY_HELAN Phenylalanine ammonia-lyase/phenylalanine ammonia lyase
893
Q42667 Citrus limon AAB67733 PALY_CITLI Phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
AAK84225 Rehmannia glutinosa phenylalanine ammonia-lyase
8
O23924 Digitalis lanata CAA05251 PALY_DIGLA Phenylalanine ammonia-lyase/phenylalanine ammonia lyase
AAK15640 Agastache rugosa phenylalanine ammonia-lyase
39000211111
CAC81822 Beta vulgaris CAH17686 phenylalanine ammonia-lyase/phenylalanine ammonia lyase
BAB19128 Dianthus caryophyllus phenylalanine ammonia-lyase
43
AAR19393 Stellaria longipes phenylalanine ammonia-lyase
90
AAX22055 Brassica napus AAX22056 phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
AAX22053 Brassica napus AAX22054 phenylalanine ammonia-lyase/phenylalanine ammonia-lyase
50
AT3G53260 = NP_190894 P45724 AAC18871 CAB64229 AAK32895 AAM12956 AAM91425 AAN15354 AAP59439 PAL2; phenylalanine ammonia-lyase/PAL2_ARATH Phenylalanine ammonia-lyase 2/phenylalanine ammonia lyase /phenylalanine ammonia-lyase /AT3g53260/T4D2_190 /phen
53
AAC18870 Arabidopsis thaliana phenylalanine ammonia lyase
AT2G37040 = NP_181241 P35510 AAK76593 AAL85094 AAM15324 AAO29949 AAP59438 PAL1; phenylalanine ammonia-lyase/PAL1_ARATH Phenylalanine ammonia-lyase 1/putative phenylalanine ammonia lyase PAL1 /putative phenylalanine ammonia lyase PAL1 /phenylalanine
98892142313320389569100
0.100