query gene name (MSI4300_0): global / partial tree
File name:
139 aa residues 119 OTU included.
Results of partial trees included / Partial tree including Ppa.
Assemble Job Id:
Tree job id: Lzkf8m
BP values out of 100
Analyzed by aono@nibb.ac.jp
Date: Thu May 25 15:46:46 JST 2006
Smo_AtMSI4_108_1
Smo_AtMSI4_59_1
100
NP_586003 Encephalitozoon cuniculi GB-M1 CAD25607 HISTONE ACETYLTRANSFERASE TYPE B SUBUNIT 2/HISTONE ACETYLTRANSFERASE TYPE B SUBUNIT 2
64
XP_628031 Cryptosporidium parvum Iowa II EAK88601 Cryptosporidium parvum hypothetical protein cgd1_1930/WD40 repeat protein, predicted histone deacetylase subunit
XP_665583 Cryptosporidium hominis TU502 EAL35353 Cryptosporidium hominis ENSANGP00000014714/ENSANGP00000014714
XP_626028 Cryptosporidium parvum Iowa II EAK88156 Cryptosporidium parvum hypothetical protein cgd5_740/WD repeat protein
10034
EAS06726 Tetrahymena thermophila SB210 hypothetical protein TTHERM_00688660
XP_960994 Neurospora crassa N150 XP_326965 Neurospora crassa Q7S7N3 EAA31758 hypothetical protein/hypothetical protein /HAT2_NEUCR Histone acetyltransferase type B subunit 2 /hypothetical protein
EAQ86490 Chaetomium globosum CBS 148.51 hypothetical protein CHGG_07743
78
XP_367398 Magnaporthe grisea 70-15 hypothetical protein MG07323.4
51
XP_386974 Gibberella zeae PH-1 Q4I7L0 Gibberella zeae EAA76730 Gibberella zeae PH-1 hypothetical protein FG06798.1/HAT2_GIBZE Histone acetyltransferase type B subunit 2 /hypothetical protein FG06798.1
100
XP_748030 Aspergillus fumigatus Af293 Q4WEI5 Aspergillus fumigatus EAL85992 Aspergillus fumigatus Af293 chromatin assembly factor 1 subunit C/HAT2_ASPFU Histone acetyltransferase type B subunit 2 /chromatin assembly factor 1 subunit C, putative
Q2UA71 Aspergillus oryzae BAE61544 HAT2_ASPOR Histone acetyltransferase type B subunit 2/unnamed protein product
100100
NP_587881 Schizosaccharomyces pombe 972h- O94244 Schizosaccharomyces pombe CAA20448 hypothetical protein SPCC1672.10/HAT2_SCHPO Histone acetyltransferase type B subunit 2/SPCC1672.10
NP_594864 Schizosaccharomyces pombe 972h- O14021 Schizosaccharomyces pombe CAB10144 hypothetical protein SPAC29A4.18/PRW1_SCHPO RbAp48-related WD40-repeat protein prw1/SPAC29A4.18
5980
XP_571944 Cryptococcus neoformans var. neoformans JEC21 Q5KDT9 Filobasidiella neoformans EAL19568 Cryptococcus neoformans var. neoformans B-3501A AAW44637 Cryptococcus neoformans var. neoformans JEC21 H3/H4 histone acetyltransferase /HAT2_CRYNE
XP_760907 Ustilago maydis 521 Q4P553 Ustilago maydis EAK86140 Ustilago maydis 521 hypothetical protein UM04760.1/HAT2_USTMA Histone acetyltransferase type B subunit 2/hypothetical protein UM04760.1
37
3886_Cre
Smo_AtMSI4_7_2 Smo_AtMSI4_27_1
Ppa_AtMSI4_6_1
76
AT5G58230 = NP_200631 O22467 AAB70242 BAA96914 AAL24356 AAM47965 MSI1 (MULTICOPY SUPRESSOR OF IRA1)/MSI1_ARATH WD-40 repeat protein MSI1 (Protein MULTICOPY SUPPRESSOR OF IRA 1) (Protein medicis) /WD-40 repeat protein /WD-40 repeat protein MSI1 /WD-4
O22466 Lycopersicon esculentum AAB70241 MSI1_LYCES WD-40 repeat protein MSI1/WD-40 repeat protein
97
ABB92268 Triticum aestivum MSI
AAL33648 Zea mays MSI type nucleosome/chromatin assembly factor C
58
AAT85286 Oryza sativa (japonica cultivar-group) MSI type nucleosome/chromatin assembly factor C, putative
10010058
AT2G16780 = NP_179269 O22468 B84544 AAB70243 AAD24611 AAL10505 AAM65591 MSI2/MSI2_ARATH WD-40 repeat protein MSI2/B84544 probable WD-40 repeat protein, MSI2 /WD-40 repeat protein /putative WD-40 repeat protein, MSI2 /At2g16780/T24I21.19 /putative WD
AT4G35050 = NP_195231 O22469 CAA17770 CAB80222 AAO22687 AAW38992 MSI3/MSI3_ARATH WD-40 repeat protein MSI3/WD-40 repeat protein (MSI3) /WD-40 repeat protein (MSI3) /putative WD-40 repeat protein (MSI3) /At4g35050
AAB70244 Arabidopsis thaliana WD-40 repeat protein
100100
BAD46577 Oryza sativa (japonica cultivar-group) putative WD-40 repeat protein
924550
gnl|CMER|CMT515C_chromatin_assembly_factor_1_55_kDa_subunit
24
XP_640105 Dictyostelium discoideum AX4 EAL66124 Dictyostelium discoideum hypothetical protein DDB0204816/hypothetical protein DDB0204816
CAE60158 Caenorhabditis briggsae Hypothetical protein CBG03710
NP_492552 Caenorhabditis elegans T23391 P90916 CAB03178 CAA19477 AAD05571 abnormal cell LINeage family member (lin-53)/T23391 hypothetical protein K07A1.12 - Caenorhabditis elegans/LIN53_CAEEL Probable histone-binding protein lin-53 (Abnormal cell li
100
CAE60159 Caenorhabditis briggsae Hypothetical protein CBG03711
NP_492551 Caenorhabditis elegans P90917 CAB03172 RbAp48 related family member (rba-1)/RBA1_CAEEL Probable histone-binding protein rba-1 /Hypothetical protein K07A1.11
10058
AAL56459 Oikopleura dioica similar to retinoblastoma binding proteins 4 and 7
AAW27171 Schistosoma japonicum SJCHGC09312 protein
XP_624580 Apis mellifera PREDICTED: similar to ENSANGP00000014714
NP_524354 Drosophila melanogaster Q24572 AAB37257 AAF55146 AAL28956 EAL29039 Drosophila pseudoobscura Chromatin assembly factor 1 subunit CG4236-PA/CAF1_DROME Probable histone-binding protein Caf1 (Chromatin assembly factor 1 p55 subunit) (CAF-1 p5
54
XP_312936 Anopheles gambiae str. PEST EAA08393 ENSANGP00000014714/ENSANGP00000014714
77
XP_858055 Canis familiaris XP_858100 NP_114004 Rattus norvegicus XP_520956 Pan troglodytes NP_001029810 Bos taurus XP_857851 Canis familiaris XP_537971 NP_002884 Homo sapiens XP_857969 Canis familiaris XP_858015 NP_033057 Mus musculus XP
BAE27173 Mus musculus unnamed protein product
Q5R654 Pongo pygmaeus CAH92762 RBBP7_PONPY Histone-binding protein RBBP7 (Retinoblastoma-binding protein 7) (RBBP-7)/hypothetical protein
6696
NP_990001 Gallus gallus Q9I8G9 AAF87775 retinoblastoma binding protein 7/RBBP7_CHICK Histone-binding protein RBBP7 (Retinoblastoma-binding protein 7) (RBBP-7) (Retinoblastoma-binding protein p46)/Rbap46 polypeptide
NP_989285 Xenopus tropicalis Q8AVH1 Xenopus laevis Q6P315 Xenopus tropicalis AAH42283 Xenopus laevis AAH64219 Xenopus tropicalis retinoblastoma binding protein 7/RBBP7_XENLA Histone-binding protein RBBP7 (Retinoblastoma-binding protein 7) (RB
6357
XP_780271 Strongylocentrotus purpuratus XP_801904 PREDICTED: similar to retinoblastoma binding protein 4 isoform 1/PREDICTED: similar to retinoblastoma binding protein 4 isoform 2
29
XP_851729 Canis familiaris NP_033056 Mus musculus XP_864445 Canis familiaris NP_005601 Homo sapiens NP_990183 Gallus gallus XP_535325 Canis familiaris XP_864423 XP_232764 Rattus norvegicus XP_864405 Canis familiaris Q3MHL3 Bos taurus 1
XP_227252 Rattus norvegicus PREDICTED: similar to retinoblastoma binding protein 4
10
XP_848223 Canis familiaris PREDICTED: similar to retinoblastoma binding protein 4 isoform 1
XP_225450 Rattus norvegicus PREDICTED: similar to HECT type E3 ubiquitin ligase
15
BAE01249 Macaca fascicularis unnamed protein product
5
NP_001011394 Xenopus tropicalis Q5M7K4 AAH88588 CAJ82718 hypothetical protein LOC496866/RBBP4_XENTR Histone-binding protein RBBP4 (Retinoblastoma-binding protein 4) (RBBP-4)/Hypothetical protein LOC496866 /OTTXETP00000010326
XP_708179 Danio rerio XP_707625 XP_708180 XP_707626 AAH45315 CAG10718 Tetraodon nigroviridis PREDICTED: similar to Retinoblastoma binding protein 4 isoform 2/PREDICTED: similar to Retinoblastoma binding protein 4 isoform 2 /PREDICTED: similar to Re
Q6P3H7 Danio rerio RBBP4_BRARE Histone-binding protein RBBP4 (Retinoblastoma-binding protein 4) (RBBP-4)
NP_997760 Danio rerio AAQ94567 retinoblastoma binding protein 4/retinoblastoma binding protein 4
6671
AAH67546 Danio rerio Rbb4l protein
NP_997775 Danio rerio Q7ZTY4 AAH52110 retinoblastoma binding protein 4, like/RBBP7_BRARE Histone-binding protein RBBP7 (Retinoblastoma-binding protein 7) (RBBP-7)/Unknown (protein for MGC:85617)
20
CAF90748 Tetraodon nigroviridis unnamed protein product
49
O93377 Xenopus laevis AAC26046 RBP4A_XENLA Histone-binding protein RBBP4-A (Retinoblastoma-binding protein 4-A) (RBBP-4-A) (Retinoblastoma-binding protein p48-A)/retinoblastoma A associated protein; RbAp48
10
AAH77257 Xenopus laevis Rbbp4 protein
1334
Q6INH0 Xenopus laevis AAH72311 RBP4B_XENLA Histone-binding protein RBBP4-B (Retinoblastoma-binding protein 4-B) (RBBP-4-B) (Retinoblastoma-binding protein p48-B)/MGC82618 protein
10251373466828082323965265534
Smo_AtMSI4_24_1
ABA91317 Oryza sativa (japonica cultivar-group) WD-40 repeat protein, putative
26
AT2G19540 = NP_179544 AAD10153 AAK43883 AAM91214 nucleotide binding/putative WD-40 repeat protein /putative WD-40 repeat protein /putative WD-40 repeat protein
37
AAN40972 Tortula ruralis WD40
50
3036_Cre
XP_635306 Dictyostelium discoideum AX4 EAL61767 Dictyostelium discoideum hypothetical protein DDB0183986/hypothetical protein DDB0183986
1531
gnl|CMER|CMB073C_similar_to_ribosome_assembly_protein_RRB1
XP_786328 Strongylocentrotus purpuratus PREDICTED: similar to glutamate-rich WD repeat containing 1 (predicted)
NP_001003509 Danio rerio AAH78350 hypothetical protein LOC445115/Zgc:92443
CAF97904 Tetraodon nigroviridis unnamed protein product
100
NP_989268 Xenopus tropicalis AAH64215 CAJ82130 glutamate-rich WD repeat containing 1/Glutamate-rich WD repeat containing 1 /glutamate-rich WD repeat containing 1
AAH73699 Xenopus laevis MGC83609 protein
77
AAH44118 Xenopus laevis Grwd-pending-prov protein
98
XP_887964 Bos taurus XP_612892 XP_887970 PREDICTED: similar to Glutamate-rich WD-repeat protein 1 isoform 4/PREDICTED: similar to Glutamate-rich WD-repeat protein 1 isoform 1 /PREDICTED: similar to Glutamate-rich WD-repeat protein 1 isoform 5
NP_113673 Homo sapiens Q9BQ67 AAH02440 AAK17998 BAB85528 CAD28519 BAC11130 glutamate-rich WD repeat containing 1/GRWD1_HUMAN Glutamate-rich WD repeat-containing protein 1/Glutamate-rich WD repeat containing 1 /glutamate rich WD repeat protein /KIAA19
16
Q810D6 Mus musculus AAH08121 BAC66461 AAH83143 GRWD1_MOUSE Glutamate-rich WD repeat-containing protein 1 (Protein A301)/Grwd1 protein /A301 protein /Grwd1 protein
31
NP_001012067 Rattus norvegicus Q5XI13 AAH83883 glutamate-rich WD repeat containing 1 (predicted)/GRWD1_RAT Glutamate-rich WD repeat-containing protein 1 /Glutamate-rich WD repeat containing 1 (predicted)
40
XP_854878 Canis familiaris PREDICTED: similar to glutamate-rich WD repeat containing 1 (predicted)
61
XP_887978 Bos taurus PREDICTED: similar to Glutamate-rich WD-repeat protein 1 isoform 6
100659932
XP_308636 Anopheles gambiae str. PEST EAA04110 ENSANGP00000011206/ENSANGP00000011206
EAL25919 Drosophila pseudoobscura GA11814-PA
NP_610182 Drosophila melanogaster AAL49099 AAM75055 AAF57313 lethal (2) 09851 CG12792-PA/RE55020p /RE17371p /CG12792-PA
1009550
NP_498091 Caenorhabditis elegans AAF60780 Y54H5A.1/Hypothetical protein Y54H5A.1
CAE73768 Caenorhabditis briggsae Hypothetical protein CBG21312
1004417
XP_655352 Entamoeba histolytica HM-1:IMSS EAL49961 Glutamate-rich WD-repeat protein/Glutamate-rich WD-repeat protein, putative
XP_756949 Ustilago maydis 521 EAK80783 hypothetical protein UM00802.1/hypothetical protein UM00802.1
2214
XP_679429 Plasmodium berghei strain ANKA CAH96816 Plasmodium berghei hypothetical protein/conserved hypothetical protein
XP_725376 Plasmodium yoelii yoelii str. 17XNL EAA16941 Plasmodium yoelii yoelii hypothetical protein PY00572/putative WD-40 repeat protein
10021
XP_458687 Debaryomyces hansenii CBS767 CAG86826 hypothetical protein DEHA0D05863g/unnamed protein product
XP_711642 Candida albicans SC5314 XP_711573 EAK92349 EAK92420 putative nucleolar ribosome biogenesis factor Rrb1p/putative nucleolar ribosome biogenesis factor Rrb1p /likely nucleolar ribosome biogenesis factor Rrb1p /likely nucleolar ribosome biogen
100
XP_448393 Candida glabrata CBS 138 CAG61354 unnamed protein product/unnamed protein product
NP_013850 Saccharomyces cerevisiae Q04225 CAA88556 Essential nuclear protein involved in early steps of ribosome biogenesis; physically interacts with the ribosomal protein Rpl3p; Rrb1p/RRB1_YEAST Ribosome assembly protein RRB1/unknown
XP_455855 Kluyveromyces lactis NRRL Y-1140 CAG98563 unnamed protein product/unnamed protein product
5481
NP_984338 Eremothecium gossypii AAS52162 Ashbya gossypii ATCC 10895 ADR242Cp/ADR242Cp
8298
XP_501895 Yarrowia lipolytica CLIB122 CAG82212 hypothetical protein/unnamed protein product
87
XP_664809 Aspergillus nidulans FGSC A4 EAA61457 hypothetical protein AN7205.2/hypothetical protein AN7205.2
XP_750920 Aspergillus fumigatus Af293 EAL88882 ribosome biogenesis protein Rrb1/ribosome biogenesis protein (Rrb1), putative
100
XP_382876 Gibberella zeae PH-1 EAA67204 hypothetical protein FG02700.1/hypothetical protein FG02700.1
XP_958516 Neurospora crassa N150 XP_329880 Neurospora crassa EAA29280 hypothetical protein/hypothetical protein /hypothetical protein
EAQ88812 Chaetomium globosum CBS 148.51 hypothetical protein CHGG_05431
62619975
CAJ06497 Leishmania major hypothetical protein, conserved
491446
XP_952045 Theileria annulata strain Ankara CAI74313 Theileria annulata hypothetical protein TA14475/hypothetical protein, conserved
XP_625913 Cryptosporidium parvum Iowa II EAK87920 Cryptosporidium parvum hypothetical protein cgd4_3360/WD repeat protein
XP_668615 Cryptosporidium hominis TU502 EAL38409 Cryptosporidium hominis hypothetical protein Chro.40382/hypothetical protein Chro.40382
1003598
gnl|CMER|CMQ367C_similar_to_nucleosome/chromatin_assembly_factor_C
Smo_AtMSI4_2_1
Smo_AtMSI4_4_1
100
Ppa_AtMSI4_11_1 AAX58755 Physcomitrella patens WD-40 repeat domain protein
AAF97517 Zea mays AAK67147 WD-repeat protein RBAP1/nucleosome/chromatin assembly factor C
AAM77039 Zea mays nucleosome/chromatin assembly factor group C
45
NP_916585 Oryza sativa (japonica cultivar-group) BAD81520 putative WD-repeat protein RBAP1/putative Y1 protein
98
CAB52218 Silene latifolia CAB52261 CAB52219 CAC81926 CAC81927 CAF74832 Silene dioica CAF74833 CAF74834 Silene diclinis Y1 protein/Y1 protein /X1 protein /putative WD-repeat protein /putative WD-repeat protein /putative WD repeat protein /putative
CAF74835 Silene diclinis putative WD repeat protein
46
CAF74836 Silene noctiflora putative WD repeat protein
AAL92489 Silene conica SlX1-like protein
80100
AAX47182 Pisum sativum FVE
AT4G29730 = NP_194702 Q9SU78 CAB45333 CAB79731 AAQ89632 BAD44188 MSI5/MSI5_ARATH WD-40 repeat protein MSI5/WD-40 repeat-like protein /WD-40 repeat-like protein /At4g29730 /WD-40 repeat-like protein
AT2G19520 = NP_565456 O22607 AAD03340 AAL15286 AAL24281 AAM10009 AAD10151 AAP29474 AAP29475 AAX51264 FVE (FVE)/MSI4_ARATH WD-40 repeat protein MSI4 (Altered cold-responsive gene 1 protein)/WD-40 repeat protein MSI4 /At2g19520/F3P11.12 /putative WD-4
5957344861979641
0.100