#NEXUS [MacClade 4.08 registered to M. Hasebe, NIBB] BEGIN DATA; DIMENSIONS NTAX=6 NCHAR=350; FORMAT DATATYPE=PROTEIN SYMBOLS = " 1 2 3 4" MISSING=? GAP=- ; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .] 'gi|42572493|ref|NP 974342.1| TTN9 (TITAN9) [Arabidopsis thaliana] >gi|22331190|ref|NP 188642.2| TTN9 (TITAN9) [Arabidopsis thal' MEALYAKL-------YDKYTKLQKKKYSEYDEI---------------------NKEQEEKFLTFVSASEELMEHLRGENQSSLEMVEKLRNEIISIRSGRDDKFLECQKLLMEEELKNKSLSEEVVKLKELVQEEHPRNY--------------EDQSGKKQKRKTPES------ARVTTRSMIKRSRLSEDLVETDMVS-----------PDISKHHKAKEPLLVSQPQCCRTTYDGSSSSASCTFQALGKHLLGMKLSTNN----KGKRACIVASHPTTGLSFSLTFINNPN-----GEESELLYKPASLGTFQRVAPEWMREVIKFSTSMCPIFFERVSRVIKLNC [282] 'gi|52076865|dbj|BAD45806.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]' MEQLNAKL-------YHRYTALKKRKLLD-EGL---------------------DQKRAADINELRQAMKDWVAELQSENE---RLVAKL--------TQKEQQLVEAQTLLLDETRKTKELNSEILKLQCLLAEKNDANHIATGSPDTTAEMTIENQTPISPAKKTPKSNSRERNIRSIEKAIVPRNGFQEE----------------------------GRDLDSCRRHMSISGSATEESSSTCMFHLLAESMVGMKFSVKN----ETEGFSLSVSHEASGYNFTLTWVDQPG-----G--SEWSYQYSSLGTLDRIAMGWMKEDIKFSSTMCPVFFKQISHILR-QC [270] 'gi|13194678|gb|AAK15504.1| unknown [Pennisetum ciliare]' LS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KNASIPHRSLEEE----------------------------SQELECSRRYKCSSENETDEWPSARMFHLMLQSLVRMKVTVDD----GTESFSVSVCHEASGYSFKLTWLENPG---------EWSYKLSSLGTLERIAVDWMKQDITFSMNMCRVFFERISNIIT-RG [130] lcl|Smo_At3g20070_1_1_unnamed_protein_product -----------------------?RRIENAEKL---------------------FEEHKLRTAAYSKATESLVETLREENE--------------------------------------------------------------------------------------------------MLRHLVKESQVEETMVRLKELE-----------KENALY---RNQLLMAQARDCHS--DRTREDRYRFLQRLFELLSDMQITEVE----DDNSAAFVFLHQSTGLKFSLEPVVDPDTARICGGDREVKFTSLALGSLRYIAPEWMRESITFSISQAPVFFRRIQTVTRGRS [188] lcl|Smo_At3g20070_2_1_unnamed_protein_product LKRAYDKI-------YDKYERDKARRIENAEKL---------------------FEEHKLRTAAYSKATESLVETLREENE--------------------------------------------------------------------------------------------------MLRHLVKESQVEETMVRLKELE-----------KENALY---RNQLLMAQARDCHS--DRTREDRYKFLQRLFQLLSDMQITEVE----DDNSAAFVFLHQSTGLKFSLEPVVDPDTARICGGDREVKFTSLALGSLRYIAPEWMRESITFSISQAPVFFRRIQTVTRGRS [204] lcl|Ppa_At3g20070_1_1_unnamed_protein_product VSQLRTEVAECRVGNTEPHEIVRDKEIEETQDIGGHQKIARTEDNNELQVSAPENEGPRENVLDLLEPSRSGEEQVVS-TQKSVASVLPLDSSLKNARSPKGSAAADPNKAIV------------------------------------IFPDPISESLPHSNEAQLQDLHRREDELQDLYRHLVELQEQHRKNVELLDLNRKEVEFQDRRRKEIVLQDRHRKEFEQQQRHRKEVTALISE---SEMLQKILGFFLDMKVVSDEIARKQRGTPALILSHSFTGFRFRLEILKDHDVQEEVGKELELSYRNLSLGTLVRVAPWWMKEELVFSVDQLVNFVRKFQETVTGCK [310] ; END; BEGIN CODONS; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE=unord PolyTcount=MINSTEPS ; EXSET * UNTITLED = 1-180 194-221 236-237 242-244 265-268 296-304 348; END; BEGIN MacClade; Version 4.0 87; LastModified -1064940352; FileSettings editor '0' '0' '1' '1'; Singles 100; Editor 00011001111111100100010111 '1' '12' Geneva '8' '490' '1' all; EditorPosition '300' '80' '383' '1229'; TreeWindowPosition '46' '6' '955' '1230'; ListWindow Characters closed Geneva '9' '50' '10' '273' '359' 000; ListWindow Taxa closed Geneva '9' '50' '10' '276' '490' 100000000; ListWindow Trees closed Geneva '9' '50' '10' '276' '490' ; ListWindow TypeSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow ExSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow CharSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow TaxSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow CharPartitions closed Geneva '9' '50' '10' '276' '490' ; 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