#NEXUS 
[MacClade 4.08 registered to M. Hasebe, NIBB]


BEGIN DATA;
	DIMENSIONS  NTAX=30 NCHAR=5411;
	FORMAT DATATYPE=PROTEIN  SYMBOLS = " 1 2 3 4"  MISSING=? GAP=- ;
MATRIX
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'gi|18402837|ref|NP 565733.1| RAD50; ATP binding / nuclease/ zinc ion binding [Arabidopsis thaliana] >gi|22654997|gb|AAM98090.1|'    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M--------------------------------------------------------------S------------------------------------------------------------------TVDKMLIKGIRS-----F---------------------------------------------------------------------DPE---------N-------KNVVTFFRPLTLIVGANGAGKT------------------T----------------IIECLKVSCT--GE----------------------------LPPNAR-SGHSFIHDPKVAGET-----------------------------------------ETKAQIKL----------------------------------------------------------------------------------------------------------------RFKT------A-AGKDVVCIRSFQLTQKA-S----------K--------------------------------------------------------MEY-----KAIESVLQTINP--HTGE--------KVCLS-YRCADM-DREIP--------------------------------------------------------------------------------------------------------------------------------------------ALMGVSK----------------------------------------------------------------------------------------------------------------------------------------------AILENVIFVH-----------------------------------------------------------------QDESNWPLQDPSTL----------KKKFDDIFSATR---------------------------YTKALEVIKK-----L---------HKDQAQEIKTFKLKLENLQTLKDAAY-----------KLRESIAQDQERTESSKVQMLELETS-VQKVD----------------------------------------------------------AEVHNKEMMLKD---------------------LRKLQDQVSIKTAERSTLFKEQQRQYAALP---EENE-------------------DTIEELK-EW----KSKF----EERLALLGTKIRKMEREMVDTETTIS---SLH-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NAKTNYMLEISKLQTEAEAHMLLKNERD---STIQ---------------------NIFFHYNL-----------------------------------------------------------------------------------------------------------------------------GNVPSTPFSTEVVLNLTNRIKSRLGELEMDLLDKKKS----------NETALSTAWDCYMDANDRWKSIEAQKRAK----------DEIKMGISKRIEE-KEIERDSFEFEISTVDVKQTDEREKQVQVELERKTKQNSERG--------------------FESKIEQKQHEIY-------SLEHKIKTLNRERDVMAGD---AEDRVKL----SLKKTEQENLK-KKHKKI------------------------------------------IDECKDRIRGVLKGRLPPEKDMKRE-------------------------IVQALRSIEREYDDLSLKSREAEKE-------------VNMLQMKIQ----------------------------EVNNSLFKHNKDTESRKRYIESKLQALKQESVT----------------IDAYPKLLESAK-----------------DKRDDRKR--------------------------------------------------------------------------------------------EYNMANGMRQMFEPFEKRA-------------------RQEHSCPCCERSFTAD-------------EEASFIKKQR---VKASST-GEHLKALAVESS---NADSVFQQLDKLR-AVFEEYSKL---TTEIIPLA----EKTLQEHTEELGQKSEALDDVLG---------------ISAQIKA------------------DKDSIEALVQPLENADRIFQEIV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SYQKQIEDLEYKLD----------------FRGLGVKTMEEIQSELSSLQSSKDKL------------------HGELEKLRDDQIYMERDISCLQARWHAVREEKAKAANLLRDVTK----------------------------AEEDLERLAEEKSQ-------LDLDVKYLTEALGPLSKEKEQLLSDYNDMKIRRNQEY----------------------------------------------EELAEKKRNYQQEVEALLK----ASYKINEYHDLK-----KGERLDDIQEKQRLS-------DSQLQSCEARKNELA----GELNRN--------------KDLMRNQDQLRR---------------------NIEDNLNYRTTKAKVEELTREIESLEEQILNIGG----------------------IAAVEAEIVKILRERERLLS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELN-------------------------------RCRGTVSVYESSISKNRVEL-KQ------------------------------AQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQ-----------------------DMDYIRIHSDSE-G---------------------------AGTRSYSYKVLMQ-------------TGDTELEMRG-------------RCSAGQK-----------------------------------VL------------ASLIIRLAL-----------------------------AETFCLNC---------------------GILALD-------------EPTTNLDGPNSESLAG---------------------------------------------ALL---RI----MEDRKG--------QENFQLIVIT-------HDERFAQMIGQRQHAEK--------------------YYR--VAKDDMQHSIIEAQ---------------------------------------EIFD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1316]
'gi|41056568|gb|AAP34688.2| DNA repair-recombination protein [Oryza sativa (japonica cultivar-group)]'                               ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M--------------------------------------------------------------S------------------------------------------------------------------TVDKMLIKGIRS-----F---------------------------------------------------------------------DPE---------N-------KNVITFFKPLTLIVGPNGAGKT------------------T----------------IIECLKLSCT--GE----------------------------LPPNSR-SGHTFVHDPKVAGET-----------------------------------------ETKGQIKL----------------------------------------------------------------------------------------------------------------RFKT------A-AGKDVVCIRSFQLTQKA-S----------K--------------------------------------------------------MEF-----KAIESVLQTINP--HTGE--------KVCLS-YRCADM-DREIP--------------------------------------------------------------------------------------------------------------------------------------------ALMGVSK----------------------------------------------------------------------------------------------------------------------------------------------AILENVIFVH-----------------------------------------------------------------QDESNWPLQDPSTL----------KKKFDDIFSATR---------------------------YTKALEVIKK-----L---------HKDQAQEIKTFRLKLENLQTLKDQAY-----------RLRDNIAQDQEKSDALKIQMEELRTN-VQGVE----------------------------------------------------------DKIRRTEKSLAD---------------------LRRLQQEINSSTSARTTYFTLQQQQYAALS---EENE-------------------DTDDELK-EW----QTKF----EERMALLQNKISKLERDVDDENTTSS---FLS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KAINDLMRETGRLQAEADAHMSVKHERD---SAIR---------------------KIFTKHNL-----------------------------------------------------------------------------------------------------------------------------GPIPDAPLTDAAAMHLTNITKAKLSNLNDDLQDKKKS----------NEAQKQFLWGRYLEVNTRYSEVVGQIESK----------VASKKGISRRMKD-KESERDAAEMDLSKYNLPRIDEKERHLQIEVERKALALGERN--------------------YDSIVNQKRTEIF-------SLDQKIKTLQWEKDSIISD---SNDRVLL----DVKKDELEESK-KKLKKI------------------------------------------FDEHKDKIRIVFKGRTPSEKEVKKE-------------------------LSQAFGSVDREYNDLNSKSQEAAQE-------------LKLVQMKIL----------------------------DARSHLSKLQKELDAKRSYVESKLQSITKMSAD----------------INMFPKHLKDAM-----------------DEREKQKN--------------------------------------------------------------------------------------------NLSYAKGMRQMYEPFENLA-------------------RELHMCPCCQRAFTPD-------------EEDEFVKKQR---TTCEST-ADRMNKISLECS---NAEDFFQQLNKLN-ATYEEFVKL---GKEAIPLA----EKNLKQLLADESEKAQTFDDFVS---------------VLAQVKM------------------DKDAVQVLLQPVETIDRHVQEIQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLGPQVENLEYKLD----------------VRGQGVKSLEQIQLELNSVQRTRDTL------------------NNEVDDLRDQQRTLTDGLTNAQMRWHDIREEKLKASGAVHKFQK----------------------------AEEDLGHLAEEKEK-------LTLEEKHLEESLGPLSKERESLLQEHEALKEKLDQEY----------------------------------------------HQLAERKREFQQEIDALET----HNERIKGYLNSK-----KGEKLNELQEKHTQL-------QSDLQKSKERKEEKS----AELSKN--------------KELLKSQDQLKR---------------------NIDDNLNYRRTKDEVERLTHEIELLEDKILSIGS----------------------LSTIEADLKQHSQEKDRLLS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EYN-------------------------------RCQGTQSVYQSNISKHKLEL-KQ------------------------------TQYKDIEKRYFNQLLQLKTTEMANKDLDRYYAALDKALMRFHTMKMEEINKIIKELWQQTYRGQ-----------------------DIDYISINSDSE-G---------------------------AGTRSYSYRVVMQ-------------TGDAELEMRG-------------RCSAGQK-----------------------------------VL------------ASLIIRLAL-----------------------------AETFCLNC---------------------GILALD-------------EPTTNLDGPNAESLAG---------------------------------------------ALL---RI----MESRKG--------QENFQLIVIT-------HDERFAQLIGQRQLAEK--------------------YYR--VSKDEHQHSKIEAQ---------------------------------------EIFD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1316]
'gi|66801073|ref|XP 629462.1| hypothetical protein DDB0184568 [Dictyostelium discoideum] >gi|60462868|gb|EAL61067.1| hypothetica'    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M--------------------------------------------------------------T------------------------------------------------------------------SIEKLLVQGIRS-----F---------------------------------------------------------------------DPR---------E-------ASVIDFYSPLTLIVGQNGAGKT------------------T----------------IIECLKYTCT--GE----------------------------MPPNCS-SGQAFIHDTKIAGES-----------------------------------------EVKAQIKL----------------------------------------------------------------------------------------------------------------RFKN------P-IGKPIVASRSLSLIQKSNK----------K--------------------------------------------------------QEY-----KQIDASLQSYTS---DGQ--------KVSKS-FRCSDM-DKEIP--------------------------------------------------------------------------------------------------------------------------------------------DLMGVAK----------------------------------------------------------------------------------------------------------------------------------------------PILKHVIFCH-----------------------------------------------------------------QEDSNWPLSESAKL----------KLKFDEIFSAVK---------------------------YTKALKSLKD-----K---------RKELTTLIKELKLRLETISANIEHCN-----------RIRKELIKAEEIYSNGNKSLEDIKIA-IIEKQ----------------------------------------------------------KTLSTIKIAESK---------------------LQELKNEVTVLNARKLEMERVKNQLFNSLT---EVYQN------------------ETDEELV-FM----QSEF----NRECETMATAEKELLENSEVLLSQKE---VIN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLIKENSSQKGRLQSLISQQDSILSDRD---KQMK---------------------ELVTRYKM---------------------------------------------------------------------------------------------------------------------------SDFIQIQLPYQKEIVIKFINEITQKFDTLTSGISNYSKT----------NKQKLNAIQMKINQKRVDSNQFTSSSNEK-------------MSTITLNSKKIQSLDQEIQQHT----NSIGEIDTLEK----------QIQFSQSELSILK--SDANLQE----IQQSLDNLTTEKL-------EIEKEIQSLQSSLKLLNLQ---ASSRTRL----NIKRKEIQQNQ-QNINSQ-----------------------------------------LNSQIINSINLILPNEFNNDNNNDDDDDQFRFNIIQRIEPIVPLINKKRLIFTNQLNELKQQFQILQNKKNQIDAQ-------------LTS----------------------------------SIEPQLKKKQIELESYEKLINDSKLKQSNLFENVNSNNNNNNNNNNGITVLLFENKINEMK-----------------LSLEKLEK--------------------------------------------------------------------------------------------SFIVLESEDILYKEYIEKA-------------------NQDKECSLCKNEMNGN-------------ELTSFVHTLE---THCNDI-PNQLKQLKIEIS---NSKIQLEKFNKLL-PIIVKREEL---IEKSIPEL----KESQKNLLEQQLKSNEMVLEKQN---------------QIESLES------------------QSVLYQQVTLVFQYIDQTKQSIQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SIE----------------------SEIQKEEKEIM----------------KQSSDLRTIEEVDKDLEIQQEQLKTI------------------EKEISNFTNKQKNDQIGIFEKERQLISIKNQLTTIKSA-----------------------------------SGIIDHLRDTKKELQSNNQQLQLEIENLQQSIDQSNNDAKQLENEFQQLEIEFEKKI----------------------------------------------DAYSKEKNTFSVRLDSINS----LQSKILDPSE-------LCKQLNEIQEKNQEL-------ESNLSTLSQDYLIGQ----QHISTI--------------QQNLSSKDITKR---------------------AISDNISFRQHKNNVEQIIRQISRKNELIKEMM-----------------------QSQLEIDSNKLEQEINSLKS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KFD-------------------------------QITGQTAVLQSQINSNRQEL-SK------------------------------PTYKNIDDVNKDLLIKLQTTETVGKDLDKYYKALDKSLMKYHTLKMDEINRSIKEIWQTTYKGS-----------------------DIDTIEIRSEES-G---------------------------TANKTINYRVVMI-------------KGDVELDMRG-------------RCSAGQK-----------------------------------VL------------ACLVIRLAL-----------------------------AENFCSNC---------------------GILALD-------------EPTSHLDRANIESFAN---------------------------------------------SLL---NI----IESRKS--------QKGFQLIIIT-------HDEEFVQYLSRGNYCDY--------------------YWR--VTKNANQHSHLERK---------------------------------------EIAEL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1351]
lcl|9362_Cre_unnamed_protein_product                                    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M--------------------------------------------------------------C------------------------------------------------------------------TVEKILIKGIRS-----F---------------------------------------------------------------------SPT---------N-------EYIIEFYKPLTIIVGSNGAGKT------------------T----------------IIEALRNATT--GE----------------------------LPPNTR-QGQGFVHDPKVAGES-----------------------------------------EVKAQIRL----------------------------------------------------------------------------------------------------------------SFQT------A-MGQKIIVTRSFQLTQKK-A----------T--------------------------------------------------------MQF-----KSLDASMSCTNR--QTGQ--------RETLT-YRCGDL-DRMLGDDPAAAQVHGGAEEDVEEGDAGGREVGVGLLRDSQGRRVGEDMDDGASGQAAMEEAGEGVAQVGMWQVGVEATEVACGVREGAVRGELGGVVLADQGHDGVGGEAEPGVGARERSVPHGIELNGGSAQDGGGQVAELRNGAALGAGQ----------------------------------------------------------------------------------------------------------------------------------------------AILENVIFVH-----------------------------------------------------------------QEESNWPLAEG------------------------------------------------------KALEALRK-----L---------RTEKSQSLKELRLELETLKQLKDMAA-----------HHTGERDAAKARVADCQEQIKRLEAQ-VKELE----------------------------------------------------------TSRAAFESKLAA---------------------IEAAGRDITAKAGQLEVVRAQNAERAARFE---AEGRQ---------------DYEEPTEELV-RF----LDNA----DRAAADKAARLRALEGEANSARIAKE---AAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DAYQKHLVLHGKLAGEAATHTANIAERD---RAIR---------------------ETALALAL----------------------------------------------------------------------------------------------------------------------ALPPEAEAGEGGGAVSAAGCEAFVKAVERRVRELDSRVQALRAD----------ARSNEARMSSAVDASNAQVARAQEGLRLK-------------RGQIDKNHNDIAAAGAQIASSQFTAASAR----------------------------------------------------------------SLKEDAEAAEEAYRA------------------KQLERLLTTRR-RDLARA----------------------------------------------------------------------------------LDLPPADPLLTQPAAALSAAELGQLRPRSEAVLAR-------------LKAEEA-------------------------------ARLKTSQTAHSAAQTAKAAAASKLAELQRCRMNVIPR-----------------------------------------QSEDKGRN--------------------------------------------------------------------------------------------KLVEKQAMSRVMVRFRDSV-------------------ATHALCPVCTRGFGPG-------------EQEACLNNID---ENLKML-PQQIEQHTAKLQ---RLQAELASLRALQ-PEWAEAAQI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DYAEVQERVREAGRLQPDLMWALDRLVAEVEGLRRELHQAKLGA--------------------------------------------------------------------------------RVATVADYEARG-----RAQELEKAGEALARL--------------KSRLEECG----RQLEAR--------------EREALDIPNPPP-------------------------------PLQTEAELSRQVQEMEAEVARV----------------GD------QFELQRQSAALAGQRDGLRS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QVD-------------------------------VLSGHMGAASAAAAKAQAEL-NN------------------------------PKFRDIRPRFQLQQVTAKTTELAMADLDKYYKALEKALLVFHTSKMADINKIIKEMWQKTYRGQ-----------------------DIDYIQIKADTE-G---------------------------AGARSYNYRVVMY-------------SGAAELEMRG-------------RCSAGQK-----------------------------------VL------------ACLIIRLAL-----------------------------AETFCLNC---------------------GILALD-------------EPTTNLDAANSASLAE---------------------------------------------ALA---AL----MKSRSG--------QENFQLIVIT-------HDEHFAQDPNT-------------------------------------QHTMVTPE---------------------------------------SLRD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1171]
lcl|Smo_AtRAD50_3_1_unnamed_protein_product                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------?NI-------SKAYDELLDRSR-----------------------------------------------------------------------------------------DADMRVAQARAMLDDAKSTLAKQQEE-KEGLQ----------------------------------------------------------EAFSRLALNECS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QHDMADGMRRMFDPFERIA-------------------RATHACPCCERPFATP------------EEEDEFVDKQR---VKRSST-AQRLHELASLTS---IADNKFQQLDKLR-PLFEEYQKL---ESQGISAT----EKSISDMTMELERSTETQNDVNSFRFNVWKLANLLVSAISAQSKA------------------ELGLVTELRITAQSIEEAYTSVQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLEREVRTLENQLN-----------------PESSLRSPDDVGEELEKHEKQLEEL------------------NRKLDRLKEEHDYMKDDLANCKQRKHAEEMKKADLEKKLERNKA----------------------------LKEEEASLVKQMNQ-------IDTEIQFEMEQLEPLAEEKERHLKEFDQLKRKFRQEQ----------------------------------------------DVSTQGVNDFDKEVHSLTN----IWGKIKEYACSSSLAYVERHKTHNVQTAKRRL----SELQAQKDEEESKKSFCL----AEVQRV--------------NNVLAQQKVIER---------------------NIADNIKYRKLCAEEQKCIQEIKALEERMLAI----------------GN------TLDFEGELKKALKEKQHLMG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EES-------------------------------RHKGTIAVHESNIARNKADL-KQ------------------------------PQYKNIDKRYRAQLIQLKTMEMANKDLDKYYNALDRALMRFHTMKMEESHKIIKELWQQTYRGQ-----------------------DIDFIEIRADAE-G---------------------------TGTRSYSYRVVMR-------------AGGAELEMRG-------------RCSAGQK-----------------------------------VL------------AALIIRLAL-----------------------------AETFCLNC---------------------GILTLD-------------EPTTNLDAQNAESFAA---------------------------------------------ALLRHTRI----MEERRG--------QENFQLIVIT-------HDERFAQLIGQRQLTEK--------------------YYR--VSKDERQHSLIEVQ---------------------------------------EIFG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [730]
lcl|Smo_AtRAD50_2_1_unnamed_protein_product                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RV--------------NNVLAQQKVIER---------------------NIADNIKYRKLCAEEQKCIQEIKALEERMLAI----------------GN------TLDFEGELKKALKEKQHLMG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EES-------------------------------HHKGTIAVHESNIARNKTDL-KQ------------------------------PQYKNIDKRYRAQLIQLKTMEMANKDLDKYYNALDRALMRFHTMKMEEINKIIKELWQQTYRGQ-----------------------DIDFIEIRADAE-G---------------------------TGTRSYSYRVVMR-------------AGGAELEMRG-------------RCSAGQK-----------------------------------VL------------AALIIRLAL-----------------------------AETFCLNC---------------------GILTLD-------------EPTTNLDAQNAESFAA---------------------------------------------ALLRHTRI----MEERRG--------QENFQLIVIT-------HDERFAQLIGQRQLTEK--------------------YYR--VSKDERQHSLIEVQ---------------------------------------EIFG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [303]
lcl|Ppa_AtRAD50_2_1_unnamed_protein_product                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------?LKR---------------------KIDDNLQYRKYCRDEEEMIQKIEELEKQLADK----------------GD------LQTLEADLKRAMNDLQKLLSEVSFLRRYNCSFLGTEVLLLLYYLSIFLQELTDHKSLIW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLN-------------------------------RSQGTIAVYESNVAKNKAEL-SQ------------------------------SQYKDIDKRYSTQLIQLKTTEMANKDLDKYYHALDKALLRFHSMKMEEINKIVKELWQQTYRGQ-----------------------DIDFIEIRSDAE-E------------------------------VQVNVQVVMR-------------SGDAELDMRG-------------RCSAGQK-----------------------------------VL------------ASLIIRLAL-----------------------------AETFCLNC---------------------GILALD-------------EPTTNLDTPNAESLAT---------------------------------------------ALL---RI----MEDRRG--------QENFQLIVIT-------HDERFAQLIGQRQHAER--------------------YYR--ISKDD?-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [314]
lcl|Smo_AtRAD50719873665_1_unnamed_protein_product                                    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RK----LTSF-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTKREGARWQLERNKLAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EQA-------------------------------TIVGEMKSKDVQLQQLLADY-DI-------------------------------EYKNAAHQYRLAHVQVETTKACIEDLGRYIGALDKAVMKYHTLKMEEINRIIDELWRKTYQGT-----------------------DVDTILIKSESE-N--------------------------ARANKSYNYRVCMI-------------KSDAEMDMRG-------------RCSAGQR-----------------------------------VL------------ASIIIRLAL-----------------------------AECFGVNC---------------------GLIALD-------------EPTTNLDRDNIRALAE---------------------------------------------SLS---EI----IRVRRA--------QKNFQLIVIT-------HDEDFLRAMQCGDYADN--------------------YWR--VSRNERQKSQIERQ---------------------------------------SIAEVL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [259]
'gi|73971132|ref|XP 531901.2| PREDICTED: similar to RAD50 homolog isoform 1 [Canis familiaris]'                                    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M--------------------------------------------------------------S------------------------------------------------------------------RIEKMSILGVRS-----F------------------------------------------------------------------G-IEDK---------D-------KQIITFFSPLTILVGPNGAGKT------------------T----------------IIECLKYICT--GD----------------------------FPPGT--KGNTFVHDPKVAQET-----------------------------------------DVRAQIRL----------------------------------------------------------------------------------------------------------------RFRD------V-NGELIAVQRAMVCTQKS-K----------K--------------------------------------------------------TEF-----KTLEGVITRTKH----GE--------KVSLS-SKCAEI-DREMI--------------------------------------------------------------------------------------------------------------------------------------------SSLGVSK----------------------------------------------------------------------------------------------------------------------------------------------SVLNNVIFCH-----------------------------------------------------------------QEDSNWPLSEGKAL----------KQKFDEIFSATR---------------------------YIKALETLRQ-----V---------RQTQGQKVKECQTELKYLKQNKEKAC-----------EIRDQITSKEAQLTSSKEIVKSYENE-LDPLK----------------------------------------------------------NRLKEIEQNLSK---------------------IMRLDNEIKALDSRKKQMEKDNSEL----E---QKMEK---------------VFQGTDEQLN-DL----YHNH----QRTVREKERRLVDCQRELEKLNKESR---LLN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QEKSELLVEQGRLQLQADRHQEHIRARD---SLIQ---------------------SLATQLEL----------------------------------------------------------------------------------------------------------------------------DGFERG-PFSERHIKNFHKLVRERQEREAEIASQLMND----------FAEKETLKQEQIDEIRDKKTGLGRIIELK-------------SEILSKKQNELRNVKYELQQLEGS--SDRILELDQE------------LSKAERELSKAE--KNSNVEV----LKTEVISLQNEKA-------DLDRTLRKLDQEMEQLNHH---TTTRTQM----EMLTKDKADKD-EQIRKI------------------------------------------KSRHSDELTSLL-----GYFPN---KKQ----------------------LEDWLHSKSKEINQTRDRLAKLNKE-------------LASAEQNK-------------------------N---HINNELKRKEEQLSSYEDKLFDVC--------------------G----SQDFESDLDRLK-----------------EEIEKSSK--------------------------------------------------------------------------------------------QRAMLAGATAVYSQFITQLTD-----------------ENQSCCPVCQRVFQTE------------AELQEVISDLQ---SKLRLA-PDKLKSTESELK---KKEKRRDEMLGLV-PMRQSIIDL---KEKEIPEL----RNKLQNVNRDIQRLKNDIEEQET---------------LLGTIMP---------------EEESA---KVCLTDITIMERFQMELK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DVE----------------------RKIAQQAAKLQ-----------------GLDLDRTVQQVNQEKQEKQHKLDTV------------------SSKMELNRKLIQDQQEQIQYLKSTTNELKSEKLQISTNLQRRQQ---------M-------------------EEQTVELSTEVQS-------LSREIKDAKEQLSPLETILEKFQQEKEELINKKNKSN----------------------------------------------KIAQDKMNDIKEKVKNIHG----YMKDIENYIQDG-----KDDYKKQKENELNQV----I---AQLSECEKHKENIN----KEMGIM--------------RQDIDTQKIQER---------------------WLQDNLTLRKRNEELKEVEEERKQHLKEMGQM-----------------Q------VLQMKNEHQKLEEKIDNIKR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NHS-------------------------------LAIGRQKGYEEEIIHFKREL-RE------------------------------PQFRDAEEKHREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQ-----------------------DIEYIEIRSDAD-E------------N---------VS-ASDKRRNYNYRVVML-------------KGDTALDMRG-------------RCSAGQK-----------------------------------VL------------ASLIIRLAL-----------------------------AETFCLNC---------------------GILALD-------------EPTTNLDRENIESLAH---------------------------------------------ALV---EI----IKSRSQ--------QRNFQLLVIT-------HDEDFVELLGRSEYVEK--------------------FYR--IKKNIDQCSEIVTC---------------------------------------NVSSLGSY-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VH-----------------------------------------------------------------------------------------------------------------------   [1312]
'gi|56206965|emb|CAI24691.1| RAD50 homolog (S. cerevisiae) [Mus musculus]'                                    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M--------------------------------------------------------------S------------------------------------------------------------------RIEKMSILGVRS-----F------------------------------------------------------------------G-IEDK---------D-------KQIISFFSPLTILVGPNGAGKT------------------T----------------IIECLKYICT--GD----------------------------FPPGT--KGNTFVHDPKVAQET-----------------------------------------DVRAQIRL----------------------------------------------------------------------------------------------------------------QFRD------V-NGEMVAVHRSMLCSQKN-K----------K--------------------------------------------------------TEF-----KTLEGVITRMKH----GE--------KVSLS-SKCAEI-DREMI--------------------------------------------------------------------------------------------------------------------------------------------SCLGVSK----------------------------------------------------------------------------------------------------------------------------------------------SVLNNVIFCH-----------------------------------------------------------------QEDSNWPLSEGKAL----------KQKFDEIFSATR---------------------------YIKALDTLRQ-----V---------RQTQGQKVKECQTELKYLKQNKEKAC-----------EIRDQITSKEAQLASSQEIVRSYEDE-LEPLK----------------------------------------------------------NRLKEIEHNLSK---------------------IMKLDNEIKALESRKKQMEKDNSEL----E---QKMEK---------------VFQGTDEQLN-DL----YHNH----QRTVREKERRLVDCQRELEKLNKEAR---LLN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QEKAELLVEQGRLQLQADRHQEHIRARD---SLIQ---------------------SLATHLEL----------------------------------------------------------------------------------------------------------------------------DGFERG-PFSERQIKNFHELVKERQEREAKTASQLLSD----------LTDKEALKQRQLDELRDRKSGLGRTIELK-------------TEILTKKQSELRHVRSELQQLEGS--SDRILELDQE------------LTKAERELSKAE--KNSSIET----LKAEVMSLQNEKA-------DLDRSLRKLDQEMEQLNHH---TTTRTQM----EMLTKDKTDKD-EQIRKI------------------------------------------KSRHSDELTSLL-----GYFPN---KKQ----------------------LEDWLHSKSKEINQTRDRLAKLNKE-------------LASAEQNK-------------------------N---HINNELKKKEEQLSSYEDKLFDVC--------------------G----SQDLESDLGRLK-----------------EEIEKSSK--------------------------------------------------------------------------------------------QRAMLAGATAVYSQFITQLTD-----------------ENQSCCPVCQRVFQTE------------AELQEVISDLQ---SKLRLA-PDKLKSTESELK---KKERRRDEMLGLV-PVRQSIIDL---KEKEIPEL----RNRLQSVNRDIQRLKNDIEEQET---------------LLGTIMP---------------EEESA---KVCLTDVTIMERFQMELK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DVE----------------------RKIAQQAAKLQ-----------------GVDLDRTVQQVNQEKQEKQHRLDTV------------------TSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIATNLQRRQQ---------M-------------------EEQSVELSTEVQS-------LNREIKDAKEQISPLETALEKLQQEKEELIHRKHTSN----------------------------------------------KMAQDKINDIKEKVKNIHG----YMKDIENYIQDG-----KDDYKKQKETELNGV----A---VQLNECEKHREKIN----KDMGTM--------------RQDIDTQKIQER---------------------WLQDNLTLRKRRDELKEVEEERKQHLKEMGQM-----------------Q------VLQMKNEHQKLEENIDTIKR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NHS-------------------------------LALGRQKGYEDEILHFKKEL-RE------------------------------PQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQ-----------------------DIEYIEIRSDAD-E------------N---------VS-ASDKRRNYNYRVVML-------------KGDTALDMRG-------------RCSAGQK-----------------------------------VL------------ASLIIRLAL-----------------------------AETFCLNC---------------------GILALD-------------EPTTNLDRENIESLAH---------------------------------------------ALV---EI----IKSRSQ--------QRNFQLLVIT-------HDEDFVELLGRSEYVEK--------------------FYR--VKKNMDQCSEIVKC---------------------------------------SISSLGSY-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VH-----------------------------------------------------------------------------------------------------------------------   [1312]
'gi|6679609|ref|NP 033038.1| RAD50 homolog [Mus musculus] >gi|60392985|sp|P70388|RAD50 MOUSE DNA repair protein RAD50 (mRad50) >'    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M--------------------------------------------------------------S------------------------------------------------------------------RIEKMSILGVRS-----F------------------------------------------------------------------G-IEDK---------D-------KQIISFFSPLTILVGPNGAGKT------------------T----------------IIECLKYICT--GD----------------------------FPPGT--KGNTFVHDPKVAQET-----------------------------------------DVRAQIRL----------------------------------------------------------------------------------------------------------------QFRD------V-NGEMVAVHRSMLCSQKN-K----------K--------------------------------------------------------TEF-----KTLEGVITRMKH----GE--------KVSLS-SKCAEI-DREMI--------------------------------------------------------------------------------------------------------------------------------------------SCLGVSK----------------------------------------------------------------------------------------------------------------------------------------------SVLNNVIFCH-----------------------------------------------------------------QEDSNWPLSEGKAL----------KQKFDEIFSATR---------------------------YIKALDTLRQ-----V---------RQTQGQKVKECQTELKYLKQNKEKAC-----------EIRDQITSKEAQLASSQEIVRSYEDE-LEPLK----------------------------------------------------------NRLKEIEHNLSK---------------------IMKLDNEIKALESRKKQMEKDNSEL----E---QKMEK---------------VFQGTDEQLN-DL----YHNH----QRTVREKERRLVDCQRELEKLNKEAR---LLN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QEKAELLVEQGRLQLQADRHQEHIRARD---SLIQ---------------------SLATHLEL----------------------------------------------------------------------------------------------------------------------------DGFERG-PFSERQIKNFHELVKERQEREAKTASQLLSD----------LTDKEALKQRQLDELRDRKSGLGRTIELK-------------TEILTKKQSELRHVRSELQQLEGS--SDRILELDQE------------LTKAERELSKAE--KNSSIET----LKAEVMSLQNEKA-------DLDRSLRKLDQEMEQLNHH---TTTRTQM----EMLTKDKTDKD-EQIRKI------------------------------------------KSRHSDELTSLL-----GYFPN---KKQ----------------------LEDWLHSKSKEINQTRDRLAKLNKE-------------LASAEQNK-------------------------N---HINNELKKKEEQLSSYEDKLFDVC--------------------G----SQDLESDLGRLK-----------------EEIEKSSK--------------------------------------------------------------------------------------------QRAMLAGATAVYSQFITQLTD-----------------ENQSCCPVCQRVFQTE------------AELQEVISDLQ---SKLRLA-PDKLKSTESELK---KKERRRDEMLGLV-PVRQSIIDL---KEKEIPEL----RNRLQSVNRDIQRLKNDIEEQET---------------LLGTIMP---------------EEESA---KVCLTDVTIMERFQMELK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DVE----------------------RKIAQQAAKLQ-----------------GVDLDRTVQQVNQEKQEKQHRLDTV------------------TSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIATNLQRRQQ---------M-------------------EEQSVELSTEVQS-------LNREIKDAKEQISPLETALEKLQQEKEELIHRKHTSN----------------------------------------------KMAQDKINDIKEKVKNIHG----YMKDIENYIQDG-----KDDYKKQKETELNGV----A---VQLNECEKHREKIN----KDMGTM--------------RQDIDTQKIQER---------------------WLQDNLTLRKRRDELKEVEEEPKQHLKEMGQM-----------------Q------VLQMKNEHQKLEENIDTIKR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NHS-------------------------------LALGRQKGYEDEILHFKKEL-RE------------------------------PQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQ-----------------------DIEYIEIRSDAD-E------------N---------VS-ASDKRRNYNYRVVML-------------KGDTALDMRG-------------RCSAGQK-----------------------------------VL------------ASLIIRLAL-----------------------------AETFCLNC---------------------GILALD-------------EPTTNLDRENIESLAH---------------------------------------------ALV---EI----IKSRSQ--------QRNFQLLVIT-------HDEDFVELLGRSEYVEK--------------------FYR--VKKNMDQCSEIVKC---------------------------------------SISSLGSY-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VH-----------------------------------------------------------------------------------------------------------------------   [1312]
'gi|11560048|ref|NP 071582.1| RAD50 homolog [Rattus norvegicus] >gi|9651650|gb|AAF91229.1| Rad50 [Rattus norvegicus] >gi|6039297'    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M--------------------------------------------------------------S------------------------------------------------------------------RIEKMSTLGVRS-----F------------------------------------------------------------------G-IEDK---------D-------KQIISFFSPLTILVGPNGAGKT------------------T----------------IIECLKYICT--GD----------------------------FPPGT--KGNTFVHDPKVAQET-----------------------------------------DVRAQIRL----------------------------------------------------------------------------------------------------------------QFRD------V-NGEMVLVQRSMLCSQKS-K----------K--------------------------------------------------------TEF-----KTLEGVITRIKH----GE--------KVSLS-SKCAEI-DREMI--------------------------------------------------------------------------------------------------------------------------------------------SCLGVSK----------------------------------------------------------------------------------------------------------------------------------------------SVLNNVIFCH-----------------------------------------------------------------QEDSNWPLSEGKAL----------KQKFDEIFSATR---------------------------YIKALDTLRQ-----V---------RQTQGQKVKECQTELKYLRQNKEKAC-----------EIRDQITSKEAQLASSREIVKAYENE-LEPLK----------------------------------------------------------NRLKEIEHNLSK---------------------IMRLDNEIKALDSRKKQMEKDNSEL----E---QKMEK---------------VFQGTDEQLN-DL----YHNH----QRTVREKERRLVDCQRELEKLSKEAR---LLN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QERAELLVEQGRLQLQADRHQEHIRARD---SLIQ---------------------SLAAHLEL----------------------------------------------------------------------------------------------------------------------------DGFERG-PFSERQIKNFHELVRERQEREAKTASQLLSD----------LTDKEALKQRQMDEMRDKKSGLGRMIELK-------------TEILTKKQTELRNVRNELQQLEGS--SDRILELDQE------------LTKAERELSKAE--KNSSIET----LKAEILNLQSEKA-------DLDRNLRKLDQEMEQLNHH---TTTRTQM----EMLTKDKTDKD-EQIRKI------------------------------------------KSRHSDELTSLL-----GYFPN---KKQ----------------------LEDWLHSKSKEINQTRDRLAKLNKE-------------LASAEQNK-------------------------N---HINNELKKKEEQLSSYEDKLFDVC--------------------G----SQDFESDLDRLK-----------------EDIEKSSK--------------------------------------------------------------------------------------------QRAMLAGATAVYSQFITQLTD-----------------ENQSCCPGCQRVFQTE------------AELQEVISDLQ---SKLRLA-PDKLKSTESELK---KKERRRDEMLGLV-PMRQSIIDL---KEKEIPEL----RNRLQSVNRDIQRLKNDIEEQET---------------LLGTVMP---------------EEESA---KVCLTDVTIMERFQMELK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DVE----------------------RKIAQQAAKLQ-----------------GVDLDRTVQQVNQEKQEKQHKLDTV------------------SSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIATNLQRRQQ---------M-------------------EEQTVELSTEVQS-------LNREIKDAKEQINPLEIALEKLQQEKEELIHRKNTSN----------------------------------------------KMAQDKINDIKEKVKNIHG----YMKDIENYIQDG-----KDDYKKQKETELNEV----V---IQLNECDKHKEKIN----KEMGTM--------------RQDIDTKKIQER---------------------WLQDNLTLRKRREELKEVEEERKQHLKEMGQM-----------------Q------VLQMKNEHQKLEENIDTIKR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NHS-------------------------------LALGRQKGYEEEILHFKKEL-RE------------------------------PQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDHAIMKFHSMKMEEINKIIRDLWRSTYRGQ-----------------------DIEYIEIRSDAD-E------------N---------VS-ASDKRRNYNYRVVML-------------KGDTALDMRG-------------RCSAGQK-----------------------------------VL------------ASLIIRLAL-----------------------------AETFCLNC---------------------GILALD-------------EPTTNLDRENIESLAH---------------------------------------------ALV---EI----IKSRSQ--------QRNFQLLVIT-------HDEDFVELLGRSEYVEK--------------------FYR--VKKNIDQCSEIVKS---------------------------------------SINSLGSY-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VH-----------------------------------------------------------------------------------------------------------------------   [1312]
'gi|76669808|ref|XP 584960.2| PREDICTED: similar to RAD50 homolog isoform 1 isoform 1 [Bos taurus]'                                  ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M--------------------------------------------------------------S------------------------------------------------------------------RIEKMSIQGVRS-----F------------------------------------------------------------------G-IEDK---------D-------KQIITFFSPLTILVGPNGAGKT------------------T----------------IIECLKYICT--GD----------------------------FPPGT--KGNTFVHDPKVAQET-----------------------------------------DVRAQIRL----------------------------------------------------------------------------------------------------------------QFRD------V-NGEVVAVQRSMLCTQKS-K----------K--------------------------------------------------------TEF-----KTLEGVITRTKH----GE--------KVSLS-SKCAEI-DREMI--------------------------------------------------------------------------------------------------------------------------------------------SSLGVSK----------------------------------------------------------------------------------------------------------------------------------------------SVLNNVIFCH-----------------------------------------------------------------QEESNWPLSEGKAL----------KQKFDEIFSATR---------------------------YIKALETLRQ-----V---------RQTQGQKVKECQTELKYLKQNKEKAC-----------EIRDQITSKEAQLTSSREIVKSYENE-LDPLK----------------------------------------------------------NRLKEIEQNLSK---------------------IMRLDNEIKALESRKKQMEKDNSEL----E---QKMEK---------------VFQGSDEQLN-DL----YHNH----QRTVREKERRLVDCQRELEKLNKESR---LLN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QEKSELLVEQGRLQLQADRHQEHMQARD---SLIQ---------------------SLATQLEL----------------------------------------------------------------------------------------------------------------------------DGFELG-PFSERQIKNFHRLVRERQEKEAETASQLLND----------FVRKEALKQKQIDEIRDKKTGLGRIIELK-------------SEILTKKQNELKNVKYELQQLEGS--SDRILELDQE------------LTKAERELSKAE--KNSNVET----LKTEVISLQNEKA-------DLDRTLRKLDQEMEQLNHH---TATRTQM----EMLTKDKADKD-EQIRKI------------------------------------------KYRHSDELTSLL-----GYFPN---KKQ----------------------LEDWLHSKSKEINQTRDRLAKLNKE-------------LASAEQNK-------------------------N---HINTELKRKEEQLSSYEDKLFDVC--------------------G----SQDFESDLDRLK-----------------EEIEKSSK--------------------------------------------------------------------------------------------QRAMLAGATAVYSQFITQLTD-----------------ENQSCCPVCQRGFQTE------------AELQEVISDLQ---SKLRLA-PDKLKSTESELK---KKEKRRDEMLGLV-PMRQSIIDL---KEKEIPEL----RNKLQNVNRDIQRLKNDIEEQET---------------LLGAIIP---------------EEESA---KVCLTDVTIMERLQMELK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DVE----------------------RKIAQQAAKLQ-----------------GLDLDRSVQQVNQEKQEKQHKLDTV------------------SSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQ---------L-------------------EEQTVELSTEVQS-------LHREIKDAKEQLSPLETTLEKFQQEKEELINKKNTSH----------------------------------------------RTAQDKINEIKEKVKNIHS----YMKDIENYIQDG-----KDDYKKQKETELNKV----I---AQLSECDKHKEKIN----KEMGIM--------------RQDIDTQKIQER---------------------WLQDNLTLRKRNEELKEVEEERKQHLKEMGQM-----------------Q------VLQMKNEHQKLEEKIDNIKR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NHS-------------------------------LAIGRQKGYEEEIIHFKKEL-RE------------------------------PQFRDAEEKYREMMIIMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQ-----------------------DIEYIEIRSDAD-E------------N---------VS-ASDKRRNYNYRVVML-------------KGDTALDMRG-------------RCSAGQK-----------------------------------VL------------ASLIIRLAL-----------------------------AETFCLNC---------------------GILALD-------------EPTTNLDRENIESLAH---------------------------------------------ALV---EI----IKSRSQ--------QRNFQLLVIT-------HDEDFVELLGRSEYVEK--------------------FYR--IKKNIEQCSQIVTC---------------------------------------SVSSLGSY-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VH-----------------------------------------------------------------------------------------------------------------------   [1312]
'gi|19924129|ref|NP 005723.2| RAD50 homolog isoform 1 [Homo sapiens] >gi|5739041|gb|AAD50325.1| RAD50-2 protein [Homo sapiens] >'    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M--------------------------------------------------------------S------------------------------------------------------------------RIEKMSILGVRS-----F------------------------------------------------------------------G-IEDK---------D-------KQIITFFSPLTILVGPNGAGKT------------------T----------------IIECLKYICT--GD----------------------------FPPGT--KGNTFVHDPKVAQET-----------------------------------------DVRAQIRL----------------------------------------------------------------------------------------------------------------QFRD------V-NGELIAVQRSMVCTQKS-K----------K--------------------------------------------------------TEF-----KTLEGVITRTKH----GE--------KVSLS-SKCAEI-DREMI--------------------------------------------------------------------------------------------------------------------------------------------SSLGVSK----------------------------------------------------------------------------------------------------------------------------------------------AVLNNVIFCH-----------------------------------------------------------------QEDSNWPLSEGKAL----------KQKFDEIFSATR---------------------------YIKALETLRQ-----V---------RQTQGQKVKEYQMELKYLKQYKEKAC-----------EIRDQITSKEAQLTSSKEIVKSYENE-LDPLK----------------------------------------------------------NRLKEIEHNLSK---------------------IMKLDNEIKALDSRKKQMEKDNSEL----E---EKMEK---------------VFQGTDEQLN-DL----YHNH----QRTVREKERKLVDCHRELEKLNKESR---LLN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QEKSELLVEQGRLQLQADRHQEHIRARD---SLIQ---------------------SLATQLEL----------------------------------------------------------------------------------------------------------------------------DGFERG-PFSERQIKNFHKLVRERQEGEAKTANQLMND----------FAEKETLKQKQIDEIRDKKTGLGRIIELK-------------SEILSKKQNELKNVKYELQQLEGS--SDRILELDQE------------LIKAERELSKAE--KNSNVET----LKMEVISLQNEKA-------DLDRTLRKLDQEMEQLNHH---TTTRTQM----EMLTKDKADKD-EQIRKI------------------------------------------KSRHSDELTSLL-----GYFPN---KKQ----------------------LEDWLHSKSKEINQTRDRLAKLNKE-------------LASSEQNK-------------------------N---HINNELKRKEEQLSSYEDKLFDVC--------------------G----SQDFESDLDRLK-----------------EEIEKSSK--------------------------------------------------------------------------------------------QRAMLAGATAVYSQFITQLTD-----------------ENQSCCPVCQRVFQTE------------AELQEVISDLQ---SKLRLA-PDKLKSTESELK---KKEKRRDEMLGLV-PMRQSIIDL---KEKEIPEL----RNKLQNVNRDIQRLKNDIEEQET---------------LLGTIMP---------------EEESA---KVCLTDVTIMERFQMELK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DVE----------------------RKIAQQAAKLQ-----------------GIDLDRTVQQVNQEKQEKQHKLDTV------------------SSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQ---------L-------------------EEQTVELSTEVQS-------LYREIKDAKEQVSPLETTLEKFQQEKEELINKKNTSN----------------------------------------------KIAQDKLNDIKEKVKNIHG----YMKDIENYIQDG-----KDDYKKQKETELNKV----I---AQLSECEKHKEKIN----EDMRLM--------------RQDIDTQKIQER---------------------WLQDNLTLRKRNEELKEVEEERKQHLKEMGQM-----------------Q------VLQMKSEHQKLEENIDNIKR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NHN-------------------------------LALGRQKGYEEEIIHFKKEL-RE------------------------------PQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQ-----------------------DIEYIEIRSDAD-E------------N---------VS-ASDKRRNYNYRVVML-------------KGDTALDMRG-------------RCSAGQK-----------------------------------VL------------ASLIIRLAL-----------------------------AETFCLNC---------------------GIIALD-------------EPTTNLDRENIESLAH---------------------------------------------ALV---EI----IKSRSQ--------QRNFQLLVIT-------HDEDFVELLGRSEYVEK--------------------FYR--IKKNIDQCSEIVKC---------------------------------------SVSSLGFN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VH-----------------------------------------------------------------------------------------------------------------------   [1312]
'gi|2687853|emb|CAA99729.1| RAD50 homologue hsRAD50 [Homo sapiens]'                                    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M--------------------------------------------------------LIFSVRD------------------------------------------------------------------MFAKMSILGVRS-----F------------------------------------------------------------------G-IEDK---------D-------KQIITFFSPLTILVGPNGAGKT------------------T----------------IIECLKYICT--GD----------------------------FPPGT--KGNTFVHDPKVAQET-----------------------------------------DVRAQIRL----------------------------------------------------------------------------------------------------------------QFRD------V-NGELIAVQRSMVCTQKS-K----------K--------------------------------------------------------TEF-----KTLEGVITRTKH----GE--------KVSLS-SKCAEI-DREMI--------------------------------------------------------------------------------------------------------------------------------------------SSLGVSK----------------------------------------------------------------------------------------------------------------------------------------------AVLNNVIFCH-----------------------------------------------------------------QEDSNWPLSEGKAL----------KQKFDEIFSATR---------------------------YIKALETLRQ-----V---------RQTQGQKVEEYQMELKYLKQYKEKAC-----------EIRDQITSKEAQLTSSKEIVKSYENE-LDPLK----------------------------------------------------------NRLKEIEHNLSK---------------------IMKLDNEIKALDSRKKQMEKDNSEL----E---EKMEK---------------VFQGTDEQLN-DL----YHNH----QRTVREKERKLVDCHRELEKLNKESR---LLN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QEKSELLVEQGRLQLQADRHQEHIRARD---SLIQ---------------------SLATQLEL----------------------------------------------------------------------------------------------------------------------------DGFERG-PFSERQIKNFHKLVRERQEGEAKTANQLMND----------FAEKETLKQKQIDEIRDKKTGLGRIIELK-------------SEILSKKQNELKNVKYELQQLEGS--SDRILELDQE------------LIKAERELSKAE--KNSNVET----LKMEVISLQNEKA-------DLDRTLRKLDQEMEQLNHH---TTTRTQM----EMLTKDKADKD-EQIRKI------------------------------------------KSRHSDELTSLL-----GYFPN---KKQ----------------------LEDWLHSKSKEINQTRDRLAKLNKE-------------LASSEQNK-------------------------N---HINNELERKEEQLSSYEDKLFDVC--------------------G----SQDFESDLDRLK-----------------EEIEKSSK--------------------------------------------------------------------------------------------QRAMLAGATAVYSQFITQLTD-----------------ENQSCCPVCQRVFQTE------------AELQEAISDLQ---SKLRLA-PDKLKSTESELK---KKEKRRDEMLGLA-PMRQSIIDL---KEKEIPEL----RNKLQNVNRDIQRLKNDIEEQET---------------LLGTIMP---------------EEESA---KVCLTDVTIMERFQMELK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DVE----------------------RKIAQQAAKLQ-----------------GIDLDRTVQQVNQEKQEKQHKLDTV------------------SSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQ---------L-------------------EEQTVELSTEVQS-------LYREIKDAKEQVSPLETTLEKFQQEKEELINKKNTSN----------------------------------------------KIAQDKLNDIKEKVKNIHG----YMKDIENHIQDG-----KDDYMKQKETELNKV----I---AQLSECEKHKEKIN----EDMRLM--------------RQDIDTQKIQER---------------------WLQDNLTLRKRNEELKEVEEEGKQHLKEMGQM-----------------Q------VLQMKSEHQKLEENIDNIKR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NHN-------------------------------LALGRQKGYEEEIIHFKKEL-RE------------------------------PQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQ-----------------------DIEYIEIRSDAD-E------------N---------VS-ASDKRRNYNYRVVML-------------KGDTALDMRG-------------RCSAGQK-----------------------------------VL------------ASLIIRLAL-----------------------------AETFCLNC---------------------GIIALD-------------EPTTNLDRENIESLAH---------------------------------------------ALV---EI----IKSRSQ--------QRNFQLLVIT-------HDEDFVELLGRSEYVEK--------------------FYR--IKKNIDQCSEIVKC---------------------------------------SVSSLGFN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VH-----------------------------------------------------------------------------------------------------------------------   [1318]
'gi|47219261|emb|CAG11723.1| unnamed protein product [Tetraodon nigroviridis]'                                    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M--------------------------------------------------------------S------------------------------------------------------------------KIEKMSILGVRS-----F------------------------------------------------------------------G-IEDK---------D-------MQVISFFSPLTVLVGPNGAGKT------------------T----------------IIECLRYATS--GE----------------------------LPPGS--KGGAFVHDPKDAHET-----------------------------------------DVRAQIRL----------------------------------------------------------------------------------------------------------------LFSD------V-NGERVTIHRSMSCTQKA-K----------N--------------------------------------------------------YSF-----KSLEQVITRIKD----GE--------KVSLS-SKCADM-DREMI--------------------------------------------------------------------------------------------------------------------------------------------SSLGVSK----------------------------------------------------------------------------------------------------------------------------------------------PVLNHVIFCH-----------------------------------------------------------------QEESNWPLSEGKAL----------KEKFDAIFAATK---------------------------YIKALDTMRQ-----L---------RLKQALAVKECQMELGYLKLNKEKAQ-----------QIREAVATKEAQLMASRNSVQQIENQ-IQPLE----------------------------------------------------------DRLTDIDIKLSK---------------------VMKLDNDIKALESRKKQMEEDNKEL----E---ETMEQ---------------VFQGSDEQLQ-DN----YHNH----QRTVREKERRLTDCQKELEKAGRECQ---RLN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RVKADLLVEQGRLQLEADRHAHNIRTRD---AQVR---------------------SLSSYLDL----------------------------------------------------------------------------------------------------------------------------EGYDRT-PFSALQLQSFHRHVTERLEQERQTLAGAMAE----------LQEKEQQKQQAIDDMRDKKTGLERTVELK-------------RDLQGKKQQELRNIRAELQGLEGS--SSRLQELESE------------LAKAERELQSAV--QGSNVEE----LKNEVVELQREKA-------DLDRSQRQLDKEMETLNTH---TTARTQM----DMLKREKTEKE-DQVRKI------------------------------------------KSRHSEDLVSLL-----GHFPN---KRE----------------------LEDWIYSKSKEISATRDRLAKLNKN-------------LASSEQNK-------------------------N---HTAAELRKKEQQLASDEETFFNVC--------------------G----NQDLEQDLSKLQ-----------------EDLEKVSR--------------------------------------------------------------------------------------------QRAMLAGATAVYTQFISQLTE-----------------EREPCCPVCQRTFPME------------SELQEVISGMQ---SKLRLV-PDKLRNTEQDLK---RKERKRDDMVALR-PVRQTIVQL---QEKELPEL----RNRLQTVNREIEKLKSEVEEQES---------------LLVILMS---------------EEETA---KACLQDISLMDRYLMDLK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EVE----------------------RKIAQHSAKLQ-----------------GVDLSRTVQQVSQEKQEIQHRLDTT------------------SSKMELKRKLIQDQQDQIQLLKSAVNETREEKLQLSSNMQKRQQ---------L-------------------EDQCVEFTTEIQS-------LTRDIREAKEQLSPLSVALERLQQEKQELLDRKRQRQ----------------------------------------------EEGQEKINAINEKAKAVSA----LEREISKYVEEG-----KDEYKEQKESELQET----N---SQLHEAEKHKEKVS----KEMGTI--------------RQDIDTQKVQER---------------------WLQDNLTLRKRVEELKEVVSKRDALRKEMGNM-----------------Q------VLQLRQERREVERQLEELKK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NRS-------------------------------IAVGRQKGFEEEILHYRKEL-RE------------------------------DQYEKADERHKNKMITLRTTELVIKDLDLYYKALDQTIMKFHSMKMDEINKIVRDLWRSTYRGQGAALRQVTPARLLWTRLMALLPPDIEYIEIRSDLD-D------------N---------AS-AGVKRRTYNYRVVMV-------------KGDTALDMRG-------------RCSAGQK-----------------------------------VL------------ASLIIRLAL-----------------------------AETFCLNC---------------------GILALD-------------EPTTNLDRDNIVSLAH---------------------------------------------ALV---EI----IKSRSR--------QRNFQLLVIT-------HDEDFVELLGRSSYIEH--------------------FYR--IRKNQDQNSEITKC---------------------------------------SISSLSAY-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LH-----------------------------------------------------------------------------------------------------------------------   [1335]
'gi|50254533|gb|EAL17282.1| hypothetical protein CNBN1090 [Cryptococcus neoformans var. neoformans B-3501A]'                         ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M--------------------------------------------------------------A------------------------------------------------------------------SLNKLAIRGIRS-----F---------------------------------------------------------------------DDK---------H-------VQVIEFYSPLTVIVGHNGSGKT------------------T----------------IIECLKYATT--GD----------------------------MPPNT--KGGAFVHDPKMAGEK-----------------------------------------EVKAQVRL----------------------------------------------------------------------------------------------------------------RFWN------A-KRERMTATRNLQVTTKKTG----------Q--------------------------------------------------------LTM-----KTLEGILAKTDVGDSSGK--------RNTIS-TKCSEM-DEEVP--------------------------------------------------------------------------------------------------------------------------------------------YLLGVSR----------------------------------------------------------------------------------------------------------------------------------------------AILENVIFCH-----------------------------------------------------------------QEESNWPLSEPAAL----------KKKFDDIFEATK---------------------------YTKALDNIKT-----L---------RKERMAELKVDKERLKFLKADKDKAE-----------RLRKDLEESISQENRKQTELDNLKER-YETIK----------------------------------------------------------IRNAEFYEEATH---------------------FRQIYEQSKSLKEKKKMYEDNRKHS----K---LNMQ----------------EMDESTEELL-HM----QQNF----DAHLRTLTMQRSEKEDAKEKEESELE---DLR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKERNLANRQGGLVAHRQTYERNLRERE---AAIR---------------------QIAKAHDL----------------------------------------------------------------------------------------------------------------------------VGYDYS-PLEDSKVAEFVDKIYEMVRKAENDLKKLQTE----------NSRKERELQEELDRLSTMKTSAQATKKSK-------------EEQIIRLTEKIRTSEATFHSIS----NPSVELELNQN----------KLTELEADLSKFQ--AEITDAK----YDEKINQKGLLIR-------QKELERDNISAELAVLNRK---ADSRAKL----DLQRNELEGKN-SQISTL------------------------------------------LKTHEAKFRELV-EVDIHDVKPEDIEDK----------------------VIGAISRKDRDLIQEENNASALNRD-------------HSQVQASL-------------------------S---RAREELAIKKREIHNMQREIEAAIYNVNQPAEEEEVPAEE---------AKNLAEAFDICR-----------------SEIESVQR--------------------------------------------------------------------------------------------AIMDKQGSRVVWEGLLTTV-------------------KAGGVCEACNRGIKHE-------------EKNAVTRHME---AKIRQLMEAEQAGVDAEIEVEKSWTEILDTLIRVE-PHEAKIQDL---QRRVIPRL----ETQIKEGEEKLRSLVKEVDESKT---------------SIQKLKS---------------ASRDL---QNLKATASYINRLYIETG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLK----------------------ANVKRLQTELE-----------------SSGSSKTVEEVQKEVDRVSQEIKTL------------------SREQQAFSSEKELKVNALRATQDEIGRKSLHIGRLKAQQDKRKM----------------------------EEEALSDMQNTLGT-------LHDELRDLDQTVQAAEAPWKEKNETLGRFRTERANAE----------------------------------------------KEASTQVRMYQSSLGEIEG----KHKACQAYVAEG-----NDRKIRENEAAMSEI-------KRQISQSNDARAALE----AEISAL--------------SSELSKSESLKA---------------------NIRSNLKYREDGKKIEMVQAELDELDLDSAAE-----------------S------RAKFNKEYKGMLDEETEAQG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LMA-------------------------------ITQGGLLEMRTNRQKMEKTL-KT-------------------------------DYKNIDKEHKEQLIKTTISEYANNDLEKYGKALDNAILKYHSIKMDEINDTIGHLWNKTYQGT-----------------------DIDGIRIVSDHD-E------------------------ASTSTRKSYNYRVVMV-------------KNEVELDMRG-------------RCSAGQK-----------------------------------VL------------ASIIIRLAL-----------------------------AESFGQGC---------------------GVLALD-------------EPTTNLDQENINALAE---------------------------------------------SLA---EI----IRERRQ--------QANFQLIVIT-------HDEGFLQRLAEQDVVEY--------------------YWR--VSRDASQKSVLERQ---------------------------------------RVGRG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1329]
'gi|63054610|ref|NP 594318.2| hypothetical protein SPAC1556.01c [Schizosaccharomyces pombe 972h-] >gi|30913221|sp|Q9UTJ8|RAD50 S'    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M--------------------------------------------------------------S------------------------------------------------------------------CIDRMSIMGIRS-----F---------------------------------------------------------------------DNR---------S-------RESIQFFSPLTLIVGQNGSGKT------------------T----------------IIECLKYATT--GI----------------------------LPPNT--KGGAFIHDPKICGEK-----------------------------------------EVLAQVKL----------------------------------------------------------------------------------------------------------------AFRN------T-NQVKMICTRSLQLSVKK-T----------T--------------------------------------------------------RQQ-----KTLDGQLLILKD----NE--------RTTIS-NRCAEL-DSQVP--------------------------------------------------------------------------------------------------------------------------------------------LSLGVSK----------------------------------------------------------------------------------------------------------------------------------------------ALLDYVIFCH-----------------------------------------------------------------QEESFWPLSEPANL----------KKRFDEIFESLR---------------------------YAKALDQIKG-----L---------KRDQETQVKVDQATLTHYRSDKERAE-----------KIELRVHESLKRISCIRSKVEELDQE-ITETA----------------------------------------------------------RLQDELFKSTEE---------------------YEQQMITIRHLESQSDIINTTINDL----K---SQMT----------------ITDESSEDLE-KL----HSNF----AEKVKEEQELYKSLEKKRSDLESLLK---SRR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELLEKLTGDLGKIQGEIESLEKLKVKKS---TMIN---------------------EIVHRYNI-------------------------------------------------------------------------------------------------------------------------------------NEINEEGIMTEVSKYASLVNKNYEISSGK----------LKERQVAVRARIEGIKAHEMFLNNRVSEI-------------NSSLEKQLTTQKELRSRFEILFPVKLQREDFTK--------------DVEKSDLWIKSLR--QEYESKN----LLELLDKHQTALS-------SVENRLDEISEIVDSYHKY---SGVRTKL----QVFEENKTNKS-AILANQ------------------------------------------LMTLKSSFSEVM---SYELKDDDNYNEE----------------------LDKLVEDVRKKLQEKEEAESSLRSV-------------RERLEIRISLSVQ------------------SIN---DLTENKKIKTKTLKSYSGTFASMI------------------------------SEIKALE-----------------SEIEENRK--------------------------------------------------------------------------------------------TLHSLQFGSTFYEKAIEIC-------------------VDQHACQLCQRSLDKE-------------EEKLFVEHCH---SMIDVI-PSKSAEVYSHLE---TLTKTFKNLSEAK-PIFDEIELL----DKRLSET----KTELSDLQGDLQGLDIRKDEIQS---------------ELDTLYL---------------RRANL---EKLQLLVKDISNLEEEIR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TID----------------------RETEVLRIELP-----------------SSIAHHNLDEIYAEREKLLEKRGYL------------------RKQIERTKLEETSFKKKIDDAVLANNEQKLKLTKLNFQVNELEQ---------L-------------------EKDINKSSEDCDL-------QKKKLLEVSSKQGSQAPFLNELESEYEKLEADIQEMA----------------------------------------------QKSRTEILEANEYLHQLNE----WNSELRID---------VSTKFKCIKEKKSNI-------GEEVRIIASKIESTD----DNLRKL--------------QERLADLRTRER---------------------NASDNLRLRALMRQLEEAVTQKNYLLSQQSHD-----------------D------RESFRERMQILKSKYGALNA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERA-------------------------------GLLGECKQLENSITKDKEEL-NM-------------------------------EFKDADERFRRQLIKTKTTGKANEDLGKYAKALDVAIMQLHSMKMNEINRIVDELWKQTYCGT-----------------------DIDTILIRSDSE-G------------K---------------GNRTYNYRVCMV-------------KGDAELDMRG-------------RCSAGQK-----------------------------------VL------------ACIIIRLAL-----------------------------AECLGVNC---------------------GILALD-------------EPTTNLDEENICSLAK---------------------------------------------NLS---RI----VEFRRK--------QANFQLIVIT-------HDEQFIRLVNSDAYCSY--------------------YYR--VKRDTNQKSMVRFA---------------------------------------NTVIVLT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1290]
'gi|70993434|ref|XP 751564.1| DNA repair protein Rad50 [Aspergillus fumigatus Af293] >gi|66849198|gb|EAL89526.1| DNA repair prot'    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M----------------------------------------------------------------------------------------------------------------------------------ILSLKLNNVRS-----F---------------------------------------------------------------------DNT---------R-------SETIQFHTPLTLIVGYNGSGKT------------------T----------------IIECLKYATT--GD----------------------------LPPNS--KGGAFIHDPKLCGEK-----------------------------------------EVLAQVKL----------------------------------------------------------------------------------------------------------------SFKS------T-SGAKMVATRSLQLTVKK-T----------T--------------------------------------------------------RQQ-----KTLEGQLLMVKD----GE--------RTAIS-SRVAEL-DQIMP--------------------------------------------------------------------------------------------------------------------------------------------QYLGVSR----------------------------------------------------------------------------------------------------------------------------------------------AVLDSVIFCH-----------------------------------------------------------------QDESLWPMSEPSVL----------KKKFDEIFEAMK---------------------------YTKAIDNIKA-----L---------RKKQNEELAKYKIMEQHAKEDKEKAD-----------RAEKRSIKLQDEIESLRAETHQLSQE-MRRVA----------------------------------------------------------ELADKAWKESES---------------------YAQILGTLEGKRIEAKSLQSTIDNL----K---RHLV----------------ELDDPDEWLQ-SN----LEQF----ESKQLQYQQQEEAQKENYMEIKDRIE---QAR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QKLGVKQAEYGKYENDKANFERQVERRQ---RMTR---------------------EIARSHNI----------------------------------------------------------------------------------------------------------------------------RGFDNI--QDQSDIDDFMRKIRKLLKEQNQALERVKRE----------AQTELREVQSTLNEIGQRKSALQESKNAA-------------KRQIGANDKEASNYQAKLNEID----VDEGVQAAVEA----------NIEDISSRLNHAK--DRARSAS----LDKEIQDMNSELH-------ALEDEGARLNAELIEATKR---AGDFARL----DHLKKELKERE-RSLETM------------------------------------------KAAHGERLAKYI----GANWNPATLEQE----------------------FQRVLEEETRNVSNAESQRDGVNRE-------------LEQVEFNL-------------------------K---TSKKTLAQRQKELNSCATEIREAINEE----------------------PEEYPDALKQRQ-----------------AQLDVARR--------------------------------------------------------------------------------------------DAEQSAGLGDYFMRCLETA-------------------KQVKACRLCQRAFRAD------------AEFTVFQKRLE---GLVKKA---QIGVEEEDVE---RFEAELDAARAVS-TAYDTWTRL---SKTEIPDL----EKEEDQYALQRDELLNQLENHDK---------------IVSEKIE---------------KKRDV---EALSKTVNTIVRYESEIK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TIR----------------------SQIQDLSSNQQ-----------------DNTATRTLEDIQEEIAGIGDKTRAL------------------KKTLSKLINDREQARTEMNNLELQLRDARSKLDNVKFQLERKSD---------L-------------------LARIEEYKNLNNQ-------QREAITKADRDIEELTPELLKYQAQYDDISQRVEARE----------------------------------------------REMQQGISQLSERIRQLDL----ATEEIDSYNERG-----GPSQLERSRRELQTI-------EAEISQLEAEQANIT----KEINKI--------------SAQLKDSENTKR---------------------QYSDNLTYRQATRALAEVSAEIENLAAQNAEV-----------------D------RSRFKEESERRTREYNALAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KQA-------------------------------SKMGEMKSKDDQLMQLLADW-NT-------------------------------DYKDAASKYKEAHIKVETTKAAVDDLARYGGALDKAIMKYHSLKMEEINAIIGELWQKTYRGT-----------------------DVDTILIRSDNE-N--------------------------AKGNRSYNYRVCMV-------------KSGAEMDMRG-------------RCSAGQK-----------------------------------VL------------ASIIIRLAL-----------------------------AECFGVNC---------------------GLIALD-------------EPTTNLDRDNIRSLAE---------------------------------------------SLH---DI----IRARQQ--------QANFQLIVIT-------HDEEFLRHMQCGDFSDY--------------------YYR--VSRNEKQKSIIERQ---------------------------------------SIAEVS------YDYLRCFHI--ALTY-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1312]
'gi|83764631|dbj|BAE54775.1| unnamed protein product [Aspergillus oryzae]'                                    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M------------------------------------------------------NLIYCPILA------------------------------------------------------------------KIDKLSILGVRS-----F---------------------------------------------------------------------DNT---------R-------SETIQFHTPLTLIVGYNGSGKT------------------T----------------IIECLKYATT--GD----------------------------LPPNS--KGGAFIHDPKLCGEK-----------------------------------------EVLAQVKL----------------------------------------------------------------------------------------------------------------SFKG------T-SGAKMVSTRSLQLSVKK-T----------T--------------------------------------------------------RQQ-----KTLEGQLLMIKD----GE--------RTAIS-SRVAEL-DQIMP--------------------------------------------------------------------------------------------------------------------------------------------QYLGVSK----------------------------------------------------------------------------------------------------------------------------------------------AILDSVIFCH-----------------------------------------------------------------QDESLWPMSEPSVL----------KKKFDEIFEAMK---------------------------YTKAIDNIKS-----L---------RKKQNEELAKYKIMEQHAKEDKEKAD-----------RAEKRSIKLQQEIETLREETQQLSLE-MRRVA----------------------------------------------------------ELADKAWRESES---------------------YSQVLGTLEGKRIEAKSIQSTIDNL----K---RHLV----------------ELDDSDEWLQ-SN----LEQF----ESKQLQYEQQEEARKENYMEIKEQIE---RTR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QKLGVKQAEYGKFENDKANFERQVERRR---RMTK---------------------EIARSNNI----------------------------------------------------------------------------------------------------------------------------RGFDNI--QDQNDVDEFMRKVRKLLKDQNQTLDRVKRE----------AQGELREVQTALNDIAQQKSALQETKNAA-------------KRQIAANDKESTTYQGKLNEIN----VDEGVQAALEA----------NIEDIQSHLDQAK--GRAKSAS----WDKEIHDINSEIR-------GLEDESSRLNSELIDATKR---AGDLARL----DHLKKELKERE-RSLETM------------------------------------------KGAHGERLSKFV----GQDWKPDTLEQE----------------------FQHVLEEESKQVSRAENERDGVSRE-------------LEQVEFRL-------------------------K---NTKKVLGQRQKALKECIEEIREAINDE----------------------PEEFPEVLKQRQ-----------------AQLDIARK--------------------------------------------------------------------------------------------DAEQYAGIGEYMATCLETV-------------------KQSKVCRLCHRGFKSD------------AELQTFRNKLE---NLVKKA---KRDADDEDVK---NLEEDLEAARSAS-TSYDTWSRF---QQTEIPEL----EKEEEQYVLQRDELLNQLEDRDK---------------IVSEKTE---------------KKRDV---EALAKTVNTIVRYDGEIK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SIR----------------------SQIQDLSSKQQ-----------------DTTSARTLEDIQEEIAAIGEKSRAL------------------KKSLSKLTHEKEQTQTEINNLELQLRDVKSNLDNAKFQLERKSD---------L-------------------LARIEEYKNLNNQ-------QREAIAKADRDIEDLTPELLKVQAKYDDISQRAEARE----------------------------------------------REMQQTISQMSESVHQLEL----ANEEIDAYNERG-----GPTQLERSKRELENI-------EKQIGQLEAEQANIT----KEINKI--------------SSQLKDSENTKR---------------------QYADNLTYRQATRALDEVTQEIEQLAAQNAEV-----------------D------RSRFKDESERRTREHNALAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KQA-------------------------------GRMGEMKSKDDQLMQLLADW-NT-------------------------------DYKDAASKYKEAHIKVETTKAAVDDLARYGGALDKAIMKYHGLKMEEINAIVGELWQKTYRGT-----------------------DVDTILIRSDNE-N--------------------------AKGNRSYNYRVCMV-------------KQGAEMDMRG-------------RCSAGQK-----------------------------------VL------------ASIIIRLAL-----------------------------AECFGVNC---------------------GLIALD-------------EPTTNLDRDNIRSLAE---------------------------------------------SLH---DI----IRTRQA--------QSNFQLIVIT-------HDEEFLRYMQCGDFSDY--------------------YYR--VSRNEKQKSIIERQ---------------------------------------SIAEVGRIPNRFFD----FHANGLQVM-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1326]
'gi|67526323|ref|XP 661223.1| hypothetical protein AN3619.2 [Aspergillus nidulans FGSC A4] >gi|40740637|gb|EAA59827.1| hypotheti'    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M---------------------------------------------HSIVATENSPRSTEVQVS------------------------------------------------------------------LLTHIAIFSVRS-----F---------------------------------------------------------------------DNT---------R-------SETIQFHTPLTLIVGYNGSGKT------------------T----------------IIECLKYATT--GD----------------------------LPPNS--KGGAFIHDPKLCGEK-----------------------------------------EVLAQVKL----------------------------------------------------------------------------------------------------------------SFKG------T-SGAKMVATRSLQLTVKK-T----------T--------------------------------------------------------RQQ-----KTLEGQLLMIKE----GE--------RTAIS-SRVAEL-DQIMP--------------------------------------------------------------------------------------------------------------------------------------------QYLGVSK----------------------------------------------------------------------------------------------------------------------------------------------AILDSVIFCH-----------------------------------------------------------------QDESLWPMSEPSVL----------KKKFDEIFEAVK---------------------------YTKAIDNIKA-----L---------RKKQNEELGKYKIIEQHAKEDKEKAD-----------RAEKRSIMLQEEIETLRVETQQLTQE-MRRVA----------------------------------------------------------ELADKAWRESES---------------------YSQILGALEGKRIEAKSIQATIDNL----K---RHLV----------------ELDEPDEWLE-SN----LEQF----EARQLQYQQQEETEKEKYMEIKERIE---EAR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HKLGLKQAEYGKHENDKANFERQVERRQ---RMSK---------------------GLARSYNI----------------------------------------------------------------------------------------------------------------------------SGFDTI--VDQSDVEEFMARIRKILKDQTQVLDRAKRE----------AQGELREAQTSLNQISERKSVLQESKNAA-------------KRQIAANDKEAAGYQAKLDSIS----ADEGAQAALES----------NAEDIHSRLDQAK--ERERSAS----RDKQIEDINSQIR-------ELEDENSRLNAELIEATKK---AGDLARL----DHLKKELKDRE-RSLETM------------------------------------------KSAHGERLSKFV----NPNWKIDTLEQD----------------------FQRTLEDKSNAVIMAERAKDSLSRE-------------LEQVEYKL-------------------------K---DVEKSLTQRQKELKECVEEIREAIDDE----------------------PEEYPDVVSQRQ-----------------NQLDMAKS--------------------------------------------------------------------------------------------TAEQGAGIEEYMSRCLATA-------------------KEDKICRVCARSFKND------------NDLRTFFNRLE---GLIKRA---KLQAQAEDVE---QLEQDLNVARAAS-TAYDTWKRL---KETEIPEL----QQEDEKYTLERDELLGQLEDRDK---------------AVSEMVE---------------KKRDI---EALSKTVSTIVRYDSDIK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------STR----------------------AQIQDLSSKQQ----------------QNTAAPRTLEDIQDEIASIGEKTRAL------------------KKTLSKLTNEREHARAEINSLELQLRDVKSNLDNVKFQLERKAD---------L-------------------LSRIEEYKTLNNQ-------QREAIAKADRDIEDLNPELLKYQAIYDDISQRAEARE----------------------------------------------RELQQIISQLSDSIHQVEL----ASEEIDAYNERG-----GPHQLDRSKRELKSI-------ENEISQLETEQAALT----RTINKI--------------STQLKDSENTKR---------------------QYADNLTYRQSVRAFDKVTSEIRELESKNAEV-----------------D------RSRFKEESERRSREHNALSA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KQS-------------------------------SKMGEMKSKDDQLMQLIKDW-DT-------------------------------DYKDAAYKYKEAHIKVETTKAAVEDLARYGTALDKAIMKYHGLKMEEINAIIGELWQKTYRGT-----------------------DVDTILIRSDNE-N--------------------------ARGNRSYNYRVCMV-------------KQGAEMDMRG-------------RCSAGQK-----------------------------------VL------------ASIIIRLAL-----------------------------AECFGVNC---------------------GLIALD-------------EPTTNLDRDNIRSLAE---------------------------------------------SLH---DI----IRARQQ--------QANFQLIVIT-------HDEEFLRYMQCGDFSDY--------------------YYR--VSRNERQKSIIERQ---------------------------------------SIAEVM--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1319]
'gi|68468331|ref|XP 721725.1| hypothetical protein CaO19 1648 [Candida albicans SC5314] >gi|68468574|ref|XP 721606.1| hypothetic'    ----MIHIEKLF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SFILLFIALPSPASFIRM--------------------------------------------------------------S------------------------------------------------------------------SIYKLSIKGVRA-----F---------------------------------------------------------------------HPE---------S-------DETIQFGFPLTLICGQNGCGKT------------------T----------------VIECLKYATT--GT----------------------------LPPNS--KGGAFVHDPSLSSRT-----------------------------------------AVTGQIKL----------------------------------------------------------------------------------------------------------------AFKN------V-NGKSMITTRSVQASSKS-T----KSATGAT--------------------------------------------------------VTF-----KTLEGQLAIIEK----GD--------KISVS-SKNAEL-DAQIP--------------------------------------------------------------------------------------------------------------------------------------------VYLGASP----------------------------------------------------------------------------------------------------------------------------------------------AILENVIFCH-----------------------------------------------------------------QDESLWPLSEPSAL----------KKKFDDIFEASK---------------------------FTKVLDNFKS-----I---------KKDMATDIKLIEQSVNHLKIDKERAK-----------KVQDKLHNMNESVEKYTEEITDLNIQ-IEKKE----------------------------------------------------------KQAEELFATNQE---------------------FQRTLSDYENLLTKKQALEEQIERL----K---TSIE----------------ILPDNDEELL-NR----QENF----SAITTEKSNRIDDLQLQSTKLSDELK---NKT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KQYNELIRLDGSFKAKKAEYDSNWEKLS---EIVD---------------------KNAKDFNV-------------------------------------------------------------------------------------------------------------------------------QIS-NDRVRNIAMFKTELNKRHNTLLNEQKDLLVD----------NKRKESERQSALQDVLNSISREEQHHEYA-------------TNVINTNNEKLSVLKRKVEVGS----NNEIELEEKRN----------DLELTMKLLQEKK--DLNEVRK----LDAKIMECNTEIS-------KLEFELDELAKKLSTSNKQ---SDLRSKV----LFLEESAKSKK-AELSKI------------------------------------------FATIDSSYFDVL----GSKLDVDVGESL----------------------LSQKISNLEIKSEEQQKKVGSLESE-------------LQINKNSI-------------------------E---SILKTIEENNSKIDSLKSNITKVI-----------------GEDE----INDYENVVNDLE-----------------DSYRNVSE--------------------------------------------------------------------------------------------DVNSAEVTRDFKNSAISFA-------------------EENKCCLLCKRLFEQG-------------GLGSFIQDLK---QSVDEH-KI--QEIREQSL---EIKKELEDVKSIN-LEVINYREC----LANVQNF----ECKLKELVDKSSQIENELEQQRK---------------EQQTIKH---------------SLDNA---LSLKKPLSDATRIHLEVS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIE----------------------FQLDELNEDLS----------------GFGGSVVSVDELQKQQQDINLKIKKT------------------RQDLNDYTESKYKAQRELQKLENRVKDTKLQISNLERSLAEVTG---------I-------------------KNNISEAEDIVRS-------SEEKLKQIKTSLEELQVDKQVKSNALRDTQNSNRDTE----------------------------------------------QEMQQEVEKCHQLLTSFTS----LNDAVTYF-ETN-----IADKYEANALEMKEL----S---EQCTSLETKIDDHA----QEIKSL--------------EKEVMDASRIEH---------------------NILANIDYRSQLSRLEETELQLGSMDIEDAQS-----------------R------KEEYQVESKKLRDALSSLTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EHA-------------------------------GKIGEVKQIKDQIASLKKEL-ET------------------------------E-YKNVNQSYHEEWIKLQTNLLVSNDIQIYSKALDNGIMKYHSMKMEEINRILNELWSQTYKGS-----------------------DISTIAIKSDVN-L------------Q---------AK----GNRSYNYRVVMV-------------KESSELDMRG-------------RCSAGQK-----------------------------------VL------------ASILIRLAL-----------------------------AECFGANC---------------------GMIALD-------------EPTTNLDAENAEALAA---------------------------------------------ALN---RI----IEYRKS--------QSNFQLIVIT-------HDEKFLTHIQGDRFTDH--------------------FYR--IQRDESSKSRIYSL---------------------------------------PIGRIQEG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1332]
'gi|49527357|emb|CAG60997.1| unnamed protein product [Candida glabrata CBS138] >gi|50291227|ref|XP 448046.1| unnamed protein pro'    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M--------------------------------------------------------------S------------------------------------------------------------------AIYKLSIQGIRS-----F---------------------------------------------------------------------DSN---------D-------RETIEFGKPLTLIVGMNGSGKT------------------T----------------IIECLKYATT--GD----------------------------LPPNS--KGGVFVHDPKITGEK-----------------------------------------DVRAQVKL----------------------------------------------------------------------------------------------------------------AFTS------T-NGLSMIVTRNIQLLAKK-T----------T--------------------------------------------------------TTF-----KTLEGQLVAINK---SGE--------RTTLS-TRSVDL-DSHVP--------------------------------------------------------------------------------------------------------------------------------------------LYLGVPK----------------------------------------------------------------------------------------------------------------------------------------------AILEYVIFCH-----------------------------------------------------------------QEDSLWPLSEPSNL----------KKKFDEIFQAMK---------------------------FTKAIDNLKA-----I---------KKEMAVNIKLLTQSVEHLRIDRDRSR-----------ATKMKVKQLNEKINDYQSQVDDVEQE-LESIN----------------------------------------------------------GSLDSLFKSNQN---------------------FQSVLSRIETLNASISAASTQIERL----S---NSIE----------------KLDMPKVDLE-NL----LKNF----SESIEQKELDVKRLESKIASDRQKLE---NCQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KQSNRLMLQQGELTAKKLQNENTLKSFQ---DTIR---------------------QIKDEHKL----------------------------------------------------------------------------------------------------------------------------------DLNAEEPPQRNVDHILKKKADMESSVNEAISK----------LEETKMNLKEKSDSIRNSINLEEQKLSYY-------------ESDIKQLATKLDQKQKQISSIPA---DIEEQLKAKKA----------VWSKLSKELQEFE--KENNITD----INNQIKSNNEELS-------KSELLAQQIETDLQNYSKK---SELSTKL----SVLIENMDEKQ-NEINKI------------------------------------------TTALLNDTMIKE----WGLDDVKQLSFE----------------------FKTHYIALQKNIATNLKAFNEISKS-------------QTELEYEL-------------------------N---TCKGKVNNLQHKKEKLILNINSVL----------------PEDCS----IEDYDDVLLETE-----------------VSYKTALE--------------------------------------------------------------------------------------------NLKMHQTTLEFNRKALEVA-------------------INNDCCYLCSRSFENT------------EFRSKILKELK---EKTDTK---FEESLKTTLE---DEKEYLNNLRLAE-KDIYNLNSI----SSESKAL----QDRISQLSKELDNKKSEVAEANT---------------TIEKLKE---------------KRDHC--DNYIKPKMDKIDYLQKEIY-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NHE----------------------EEKNSLNDVIR--------------SSAENGDSVTMEQLQDNQKSTRELIWKI------------------RSEIESLQEQRENISSKNNTLINQIRQANDDVAEIEKQFDMKVT---------I-------------------QEQIANDKKHIEELTNSKESIKLHINDLSKSVEMLNKENSEKISTLDKDA-----------------------------------------------------KRKKGEFQSFNELVLQVNQ----LHHQLMQYNTS------DEQHLQECERSIKEL-------EKEMNILKNGLEADN----HVLNEQ--------------SQKLYDSTGEKR---------------------NLLQNIELIDLKEQLLSMNNELSSLNAQNAEA-----------------E------RDKYQQESARLRTQYERLSA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QNA-------------------------------GKLGEIRQIQNQIDSLTQQL-RS-------------------------------DYKDIDDKYQKEWVELQTRSFANDDIDTYSKALDSAIMKYHSLKMEDINRIIDELWKRTYTGT-----------------------DIDTIKICSDEV-G-------------------------STTKGKSYNYRVVMY-------------KQDAELDMRG-------------RCSAGQK-----------------------------------VL------------ASIIIRLAL-----------------------------SETFGINC---------------------GVIALD-------------EPTTNLDEENIESLAK---------------------------------------------SLH---NI----IEFRKH--------QKNFQLIVIT-------HDEKFLNHMNAASFTDH--------------------FFR--VKRDDRLKSLIEWV---------------------------------------DINKVTE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1305]
'gi|38636462|emb|CAE81997.1| RAD50 homolog uvs-6 [Neurospora crassa] >gi|85111188|ref|XP 963818.1| hypothetical protein ( (AB055'    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M--------------------------------------------------------------S------------------------------------------------------------------KLEKMSILGVRS-----F---------------------------------------------------------------------GPR---------H-------PEAIAFNTPLTLIVGYNGSGKT------------------T----------------IIECLKYATT--GE----------------------------LPPNS--KSGAFIHDPNLVGEK-----------------------------------------DVQAQIKL----------------------------------------------------------------------------------------------------------------SFRS------T-VGESFVVTRNVQLAVTK-T----------S--------------------------------------------------------SKQ-----KTLEGSLLLRAN----GD--------RQVLS-TRVVDL-NKLVP--------------------------------------------------------------------------------------------------------------------------------------------EKLGVSP----------------------------------------------------------------------------------------------------------------------------------------------AVLDAVIFCH-----------------------------------------------------------------QDESLWPMSPGADL----------KKRFDEIFEAKK---------------------------YAKVIDNIKL-----L---------RKTKGEELRLLRMQEAQDKENKERAD-----------KVDRELSKLIRELQEDRDKCNELQKQ-IEDED----------------------------------------------------------VRIKQKWEQANS---------------------FLKIVNELQTKQEKLEYKKDAIAEL----R---ERIE----------------ESTESDEYLR-DV----LSQY----EQTVKRMNSDRDQKVAQFGTLQTELK---TAR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKHTAKVEEQGKHQSDKEKYDRQLVSQR---QMIQ---------------------EAAEKHEI----------------------------------------------------------------------------------------------------------------------------RGYDGD--LDDQEINAFYERIQKMLQDTKRDLERLQRD----------NAAELDAKSATITELESHKASRIRDRKIS-------------SQRVATLQRDITKLQGELNNLD----VDEGAEAVLQT----------EMEGLESKIKAAK--ADNRVSE----LDSQITKLNNEVL-------TLEAQGAQLSRELVECTNL---ASERAQL----ELRKKQLTERK-RELDIL------------------------------------------KNTFNQQLTDVV----GRNWTPETIESD----------------------FQKALRQLSDRLSELRKTKDSTQQE-------------LKQVEYKL-------------------------T---TAREQQIKSVKERDSCKKDVLEALKKVPRQNKPVTES------------VDDYPDAVKEIE-----------------KLLKDTDT--------------------------------------------------------------------------------------------DLELNMYLKEYFLKAKVKA-------------------EEKHKCYLCEQSLGDE------------KTMKRLMKRIQ---DKIDDK---DRDELLEDQA---LYGRHLGTLRSVR-TKHETYGRL----CKELPSM----VEEINSLTLQKERLVRQLEDQDG---------------AFKIAEE---------------KRNAA---DVLSKSVLKIAQTVKDIA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DSE----------------------RHIERAQQN-------------------SSNQVRSADEINDDQTTCAEQLRIA------------------QAKLSKSTAERQRLKDLAAQLEVEKLELKHKITEAVQKLEHKKR---------L-------------------QDTIKNHRDEQSE-------LRKNMQDIDKEVEGIDPEIASARAALEESRKQGRARE----------------------------------------------QRIAEERDGIATTVSELKI----INREIQDYLDRG-----GPANLASNQRTIASL-------ESTIAALEKEMKDVT----IQINKL--------------NKEIDNSDAKRR---------------------NIADNLTYRKNLRERDALEEEIEELESRNAQE-----------------D------YDRLVEEAHSFELYRGKLNA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERQ-------------------------------RLMGSMSTKDEQFRRLEEEY-EI-------------------------------ELKGARARYKESHIKVETTKAAIEDLAQGNMALDHAIMQYHSLKMEEINRTIADLWQSTYQGT-----------------------DIDTIQIRSYME-S---------------------TASGATNTRRVYNYRVSMI-------------KGDTEMDMRG-------------RCSAGQK-----------------------------------VL------------ACIIIRLAL-----------------------------AESFGANC---------------------GMIALD-------------EPTTNLDSDNIRSLAE---------------------------------------------SLH---AI----IKARRS--------QNNFQLIVIT-------HDEEFLKHMQCSDFCDS--------------------FFR--VKRDENQNSVITRE---------------------------------------SITRISE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1314]
'gi|71652374|ref|XP 814845.1| DNA repair protein RAD50 [Trypanosoma cruzi strain CL Brener] >gi|70879853|gb|EAN92994.1| DNA repa'    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M--------------------------------------------------------------T------------------------------------------------------------------SIEQIQISGVRS-----F------------------------------------------------------------------D-PNPA---------H-------RQTIVFQKPLTVILGKNGAGKT------------------T----------------IIEALLNACT--GQ----------------------------MPPGSGSEKSSFVYDPKVMGET-----------------------------------------DVKAQIRL----------------------------------------------------------------------------------------------------------------LFTG------R-GGKVMQVIRSFQALRTR-T----------K--------------------------------------------------------TTF-----TTLDSTVAFQDT--ATGK--------VLSST-YRANDV-DRAVP--------------------------------------------------------------------------------------------------------------------------------------------EMLGVSP----------------------------------------------------------------------------------------------------------------------------------------------AVLEHVIFCH-----------------------------------------------------------------QEDANWPLLPPKEV----------KKIFDEIFAATR---------------------------YVLALDRLRE-----N---------SKEFRRQQKEHEANLMALREHREQAQ-----------QLTGDIAAKEELVRTIQQRSKSLEPQ-LKELH----------------------------------------------------------AVTAALSAVEQG---------------------AEGLAREAAMIQGRIDEKQESLSRMTLP-------------------------PTTLTIEEML-EF----KQGF----AERIKGLEADASDKANLLEKAEAKKQ---QCE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ETALRLRSTTEFLEQQERQYKENRVELQ---GIVK---------------------NLSTGLVL--------------------------------------------------------------------------------------------------------------------------------CDDDMCEEDLQRVSDHLNAELQLARAERDKALKE----------FDDEKKLLEDQRNMLLRSMDADNKEKDMK-------------EDQLKHLHQRVVSTEEALGKLKPYVGATYLESLKK------------TISELEQRLEVMEELKKKGENY------KQRQDILQRID-------AQNRIVAGLRQELARHKEC---LGGEAEM----NLLRTQITEKE-RFLEAE----------------------------------MRETLVPELSNFGHEMTEGS--------SLSQISLL----------------------IEQLREQKLGVLRAIQTEHGELDRQ-------------IAVLQQNR-------------------------A---QRMEEIMRENSELQRKRTNCVKAL----------------DGLGE----IDHFEAVLEKAR-----------------DLLEAARN--------------------------------------------------------------------------------------------RHHALEAMSTCYANFVQVA-------------------RVEGKCPVCDRGFTDE------------LSLANFVELNE---RHHGAS-PEMIEKAHLEAK---EAEERVRILETLE-ADVHDVRRL----ASSVPHL----ELLVTRTNEELANKSALLEDAER---------------KREDVEHQL--------KRVQDLMRTAIDLNAVACDVRALRQQLSRRE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAIKELQAEVV-----------TAAGGGADGGARTYEEVSAEYESANTELHRL--------------------NVMLNEAQRREDGESDQAAASELNARRAEYYQLEMKWMRQGE---------L-------------------EEVLARYKGEENG-------YRERIAAINAGQEGVREELLRLQSRIDTLQRARQDAEC---------------------------------------------AAQQGRIGKIEESTQMLAG----IVPKMRDYFASK-----HGEQLFRAREQMQLA----E---ASRLRAVDEVRQLR----EAIQES--------------RRVVDEQHRQAV---------------------EVGKHIEAFKKRQSIDEDQARLQEVERSLTEMKSREIRGVAAILGADVIA------GETVSRIRELIREKVSELER---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SRA-------------------------------QQEGNVEAMMQDITNLRSQL-AR------------------------------EKYHDIEKRYRSTFLKVQTTEIAVADIEKYYRALEKAVQSYHQEKIAQINQILADLWRQTYKGS-----------------------DIDTVELRSEDD-V------------------------TSTTARRSYSYRVVMK-------------RGNSEMDMRG-------------RCSAGQK-----------------------------------VL------------ASVLIRLAL-----------------------------SEAFCCDC---------------------GILALD-------------EPTTNLDEDNARSLAE---------------------------------------------SLR---LL----IENHRA--------VKHFQLIVIT-------HDEQFVRALGGQALDTF--------------------YYI--RKDRDGAFSVIEER---------------------------------------TFDQLFAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1346]
'gi|28317081|gb|AAO39559.1| LP09268p [Drosophila melanogaster]'                                    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RGCEM--------------------------------------------------------------S------------------------------------------------------------------SIESLSIQGIRS-----F------------------------------------------------------------------G-TYAD---------D-------LQSIKFSSPVTLILGENGCGKT------------------T----------------VVECLKYALT--GE----------------------------CPPGSD-RGKSFVHDPKIFGLN-----------------------------------------EVLAQIKM----------------------------------------------------------------------------------------------------------------QVRD------R-RGAQVSICRTMKVSKKR-N----------K--------------------------------------------------------MSF-----ETMDSTINFLTGAGQSKR------EKQDSLS-GRSVDI-DVAIS--------------------------------------------------------------------------------------------------------------------------------------------DFMGVSK----------------------------------------------------------------------------------------------------------------------------------------------AIINNVLFCH-----------------------------------------------------------------QEDSSWPLDESKKL----------KEKFDAIFGITE---------------------------YNKALDKIIK-----L---------RKEAMEELKIKEANIKHVAYLKQEME-----------VKTLNLQKAQRKCDAIKAQCSECEEE-MKPIE----------------------------------------------------------ARLVEIRNVEFE---------------------IGKYQAQKVEMDTKHKNCKDQISTL----T---LKIKK---------------PFRGTLDELD-QE----ISNF----DQRMLEMRQKRTEVEGDLSQIKRSSV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AEQEKLGTQDRKHCLAKQRHQSELACRAQLLKRVK---------------------EFCRELHI--------------------------------------------------------------------------------------------------------------------------PIDCDLVEQP--EKMGE-VLRDIEAMIITKHCEITEIVEQ----------NEKADRSRQVKIDELRIELTKSEQSVTAQ-------------EKQRESSKRESETLGVEIKKIE----TSMQDLKKLEK----------EINEVNELYESAT--KNIDQQA----IKDAIARKKASIA-------ENQIQFKKLDEQLTFLGSM---AKLVAEC----SLKQKELDKKN-QEVHRV------------------------------------------RSRHSDHFGKLF----KE-PITCNYRRS----------------------MQVVYEKLRREIQELNEKANTQKLK-------------EQSYEIKR-------------------------K---NLISDISRMEKELKDSEELIYQKC--------------------R----STPYDDLLERSK-----------------TTISKLQF--------------------------------------------------------------------------------------------DHGALKSSEALYKKYIQKM-------------------DEEPSCPLCHHNMTSD-------------EACDLTSELT---DEIQKL-PDNITRAEKALK---AEQIKYENLLQLK-PTILKVKEL----KDSLPQK----KEELKKVEELLGDSVSEYETLIA---------------LIGEPTH---------------NMELA---NSMMGDMSLLDEALKDSA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLT----------------------KDLDLQKGQLP----------------ASYDSSVSMDDLQAEKSKVSKELETE------------------RKELESAQNAVQQQMDALNRLREKKNSLKDRQIHLREGLQSLPQ---------L-------------------KERLEKLNSFLTT-------VASEISELKAKIQPLKLNLRAAIEEKERLKKSESEKL----------------------------------------------AQLNSKYNSYKSTDHDIQR----LNKEAEDYAKLDLR--------------------------NEIKKLDEIIMASK----DKLRKLEAEISLKTDELETIKTECSNQQTVER---------------------DLKDNRELKQLEDKEAKLRESCQVLDKQLGNL-----------------D------FHSVSKEKVNLTKQRDKATV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RKG-------------------------------ELLGQLGEIHSQVNKLQREI-DE------------------------------PRFKESLKNFRKANYEIEVTRLCIEDLGQYRLALEWALIQFHSEKMEMINRLIREYWRKIYRGN-----------------------DIDYIQVKTDEV-S------------S----------DASADRRKTYNYRVVQS-------------KNYSEIEMRG-------------RCSAGQR-----------------------------------VL------------ASLIIRLAL-----------------------------AETFSSNC---------------------GVLALD-------------EPTTNLDRANINSLCE---------------------------------------------ALN---CI----VEERQS--------QSNFMLIIIT-------HDENFVSSLGK---ITS--------------------YHR--VFRNEECKSVIRRV---------------------------------------EAGPSKKA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LIDQ---------------------------------------------------------------------------------------------------------------------   [1322]
'gi|24658110|ref|NP 726199.1| rad50 CG6339-PA [Drosophila melanogaster] >gi|7291420|gb|AAF46847.1| CG6339-PA [Drosophila melanog'    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M--------------------------------------------------------------S------------------------------------------------------------------SIESLSIQGIRS-----F------------------------------------------------------------------G-TYAD---------D-------LQSIKFSSPVTLILGENGCGKT------------------T----------------VVECLKYALT--GE----------------------------CPPGSD-RGKSFVHDPKIFGLN-----------------------------------------EVLAQIKM----------------------------------------------------------------------------------------------------------------QVRD------R-RGAQVSICRTMKVSKKR-N----------K--------------------------------------------------------MSF-----ETMDSTINFLTGAGQSKR------EKQDSLS-GRSVDI-DVAIS--------------------------------------------------------------------------------------------------------------------------------------------DFMGVSK----------------------------------------------------------------------------------------------------------------------------------------------AIINNVLFCH-----------------------------------------------------------------QEDSSWPLDESKKL----------KEKFDAIFGITE---------------------------YNKALDKIIK-----L---------RKEAMEELKIKEANIKHVAYLKQEME-----------VKTLNLQKAQRKCDAIKAQCSECEEE-MKPIE----------------------------------------------------------ARLVEIRNVEFE---------------------IGKYQAQKVEMDTKHKNCKDQISTL----T---LKIKK---------------PFRGTLDELD-QE----ISNF----DQRMLEMRQKRTEVEGDLSQIKRSSV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AEQEKLGTQDRKHCLAKQRHQSELACRAQLLKRVK---------------------EFCRELHI--------------------------------------------------------------------------------------------------------------------------PIDCDLVEQP--EKMGE-VLRDIEAMIITKHCEITEIVEQ----------NEKADRSRQVKIDELRIELTKSEQSVTAQ-------------EKQRESSKRESETLGVEIKKIE----TSMQDLKKLEK----------EINEVNELYESAT--KNIDQQA----IKDAIARKKASIA-------ENQIQFKKLDEQLTFLGSM---AKLVAEC----SLKQKELDKKN-QEVHRV------------------------------------------RSRHSDHFGKLF----KE-PITCNYRRS----------------------MQVVYEKLRREIQELNEKANTQKLK-------------EQSYEIKR-------------------------K---NLISDISRMEKELKDSEELIYQKC--------------------R----STPYDDLLERSK-----------------TTISKLQF--------------------------------------------------------------------------------------------DHGALKSSEALYKKYIQKM-------------------DEEPSCPLCHHNMTSD-------------EACDLTSELT---DEIQKL-PDNITRAEKALK---AEQIKYENLLQLK-PTILKVKEL----KDSLPQK----KEELKKVEELLGDSVSEYETLIA---------------LIGEPTH---------------NMELA---NSMMGDMSLLDEALKDSA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLT----------------------KDLDLQKGQLP----------------ASYDSSVSMDDLQAEKSKVSKELETE------------------RKELESAQNAVQQQMDALNRLREKKNSLKDRQIHLREGLQSLPQ---------L-------------------KERLEKLNSFLTT-------VASEISELKAKIQPLKLNLRAAIEEKERLKKSESEKL----------------------------------------------AQLNSKYNSYKSTDHDIQR----LNKEAEDYAKLDLR--------------------------NEIKKLDEIIMASK----DKLRKL---------------AKCSNQQTVER---------------------DLKDNRELKQLEDKEAKLRESCQVLDKQLGNL-----------------D------FHSVSKEKVNLTKQRDKATV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RKG-------------------------------ELLGQLGEIHSQVNKLQREI-DE------------------------------PRFKESLKNFRKANYEIEVTRLCIEDLGQYRLALEWALIQFHSEKMEMINRLIREYWRKIYRGN-----------------------DIDYIQVKTDEV-S------------S----------DASADRRKTYNYRVVQS-------------KNYSEIEMRG-------------RCSAGQR-----------------------------------VL------------ASLIIRLAL-----------------------------AETFSSNC---------------------GVLALD-------------EPTTNLDRANINSLCE---------------------------------------------ALN---CI----VEERQS--------QSNFMLIIIT-------HDENFVSSLGK---ITS--------------------YHR--VFRNEECKSVIRRV---------------------------------------EAGPSKKA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LIDQ---------------------------------------------------------------------------------------------------------------------   [1303]
gnl|CMER|CMQ187C_DNA_repair_protein_RAD50                                    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M--------------------------------------------------------------S------------------------------------------------------------------RLIKLGFSGVRS-----F---------------------------------------------------------------------GPD---------E-------EQRLRFQAPITVILGANGTGKT------------------T----------------IVECLRLATT--GE----------------------------LPPLVD-KGAAFVHDPRLRESK-----------------------------------------ETKAKIRL----------------------------------------------------------------------------------------------------------------LFED------A-LGRQITVNRQLQLRLTTAG----------K--------------------------------------------------------QSF-----STVETSLSIRDK---DGQ--------HIKTS-NRCNDI-NAMAP--------------------------------------------------------------------------------------------------------------------------------------------AFLGVRQ----------------------------------------------------------------------------------------------------------------------------------------------AVLENVIFVH-----------------------------------------------------------------QEESLWPLQDPKKV----------KEKFDDIFEARG---------------------------YAKALIAIQK-----C---------AQQKLAELKILHSELERWRDRLENLK-----------QKQRNCRSMQAQCLEWSNSLGTLETE-LSEKI----------------------------------------------------------RAVTELEEARAK---------------------EVERRRQLQALRDEIRIRTEERDRL---WR---ELGK----------------ELTETTQDLE-RL----LTRI----TAEYSQVDAEYRKASEESLQLQKQLQ---LLR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DREQRLQEECAAYSCQQAAIERQRASCA---ELLR---------------------EIRKSHSI--------------------------------------------------------------------------------------------------------------------------------DGTDIGEGAIERSAKDLIHILERSRNDCEREMEH----------FKRLWEDALQREQKLKLELESDQRQAQQI-------------RNEIATLEEACAETAARLQSLP---------------------------------------------------MNVEIVAMKSALLV------QFQAEKQQVDEELSNQTDMDRMSTIRKRLEQIFEVRTKNLASRR-NDVTHT------------------------------------------ATRGDTNASAIAAAFQKFREEEEASIQR----------------------LLEQRRLPSCSVSEAQDRLASAERN-------------LSAVRNRI-------------------------M---GTELEMRLRRAICDKESERLLSMRSRLREIDASV-----QPGTVD----AECLKSQISALK-----------------RRHLELES--------------------------------------------------------------------------------------------TALERDGQANWLEEMRKRV-------------------HEQKTCPLCDRAFSGM------------AEAANVESALA---RVRNTLTQAADSDSLEYVQ---DALNRAEHQWRLL-EERAAITLQEQRSISRIRSA----ESEIQRLEDARRSERTDQQVAEH-------------------------------------ELADA---RELLWYARRLAHLRQEMA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PSGPSSASGIAASSPVVAALEVDTREAPHQPTSAGDALA------R-EETSLRGELDTLLGRRQELLVRAQELHDLIQTTEKELTAERAKQHDRDQ---------L-------------------EACLAEKRKQRSE-------KQASLCALDQKVEEALLQAAPPAS-----------------------------------------------------------AALLARLEAVRSRHRAIHTDLIRLENRLQVYIQES-----RRFEGDAHKLAHKQL----ETCREQIIQTLAEEAQAV----QVVAQW--------------AGQRQNADSYLR---------------------QVRDNLRYRQLQEMLVELQQKDVELASTLPMT----------------DE------HDPHVSALEAAKAEADTLRE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVH-------------------------------HLRGQRDLLAEQLRALTVEL-DA------------------------------DVFAQAEQQFQALRLQCDVIELVCRDLRNYHRALDLAIMRYHDLKMRSINRVLRELWQSTYLGS-----------------------DIEEIEIRSDF------------------------VADSLPMGRRTYHYRVVMR-------------QGDTWLDMRG-------------RCSAGQK-----------------------------------VL------------ACLLIRLAL-----------------------------AENFGNAC---------------------GVLALD-------------EPTTNLDESHVKALAA---------------------------------------------SLS---LL----IQQRAQ--------QRNFQLILIT-------HEERFLDYLHIREYADS--------------------YIY--VTRNRQGLSQIQHH---------------------------------------SLNETTGR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------REASELPFAYPGPLVVTAR------------------------------------------------------------------------------------------------------   [1322]
'gi|89285963|gb|EAR83969.1| hypothetical protein TTHERM 00773790 [Tetrahymena thermophila SB210]'                                    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M--------------------------------------------------------------S------------------------------------------------------------------YLKKLGIYGIRS-----Y------------------------------------------------------------------GDQNSE---------K-------YEEIAFFKPLTLILGNNGAGKS------------------T----------------IIECLKLITT--GS----------------------------FPPNSD-KGKTFIKDPRLMGSN-----------------------------------------ESQGSISL----------------------------------------------------------------------------------------------------------------IFKA------I-NQKQILVRRLFQVKKEKSG----------K--------------------------------------------------------FTF-----DSKDATIKVRDK--NTGK--------DISVD-HKCLEI-EKQVP--------------------------------------------------------------------------------------------------------------------------------------------QLLGVSK----------------------------------------------------------------------------------------------------------------------------------------------AVFENVIFCH-----------------------------------------------------------------QDESLWPFGDSATL----------KSIFDELFDTKQ---------------------------FTKLQETLHK-----Q---------QKEIKKEASETKINLQHYKQRYDEAV-----------SQKQLIAKEAEDLLQATVDLEKMRNE-YNLFN----------------------------------------------------------KGIEDEETVRIR---------------------IENLNKDICNCNWNKNEMEKQQKQI----------------------------LSSCSRHYFLGED----IDTL----KKIQDHLKKENQDLKIKKEEIEESIE---TEK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RDLDKLKYEIENLKSSDKNTKQVHQDLKNIKQKLN---------------------EIMHKSID---------------------------------------------------------------------------------------------------------------------------------SDEIMLKEANQYKDQIESEYKTLSFSLKNSVQE----------YQDTIHQTQQNLQKLQVRQAELKEKKKHS-------------Q-------KRIEQLQEEIGKLKSSN----------------------TQKNLEESIQLLEVSKKNSEQ-----YNLKIQEYQDQID-------NIRQQNSGLAKQIEIINSQSKMQSKYLEL----KQMTSQFDEIN-KTMEVQ--------------------------------------------------------QKEYEQYQISQDEH----------------------LSEQRKQCMGEISSLKQQKSKLESE-------------ISKLEGRI-------------------------E---LNEDIETAFELKLNQITQTFKESN-------LLD-----IIAQDN----NADFDTKYQSIK-----------------EEIEELKN--------------------------------------------------------------------------------------------SIIEKQTCLLIDKQVLNYC-------------------TEKKKCKFCKSDVNED-------------NISKITKSQE---DRSRKA-EKDIQERIALKE---QKIFEKKQLKKLK-EQYVQYNEL----RAKQKKN----NSEIKEIQIQVKELQEQLQNLVN---------------QLINKEA---------------QLAKL---EKAHTIQSEIIKTQRQIY-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLK----------------------NKIQKFQVENP---------ELLNIDNQNIIPPEKVEEIHKNYKQNNQRLESL------------------NSLLIQENNKKANSNASFQQAEVLRKNCQNKLKEEQEQIQRN-------------------------------TKDIKDYEQQNQT-------SLTELQNIEKDIESQNKLLQELKKNVSEQTQELQKVQ----------------------------------------------QTYDQSKILIGEYLPKYEK----TYTEYKELKQAK-----GKQKSKLQENQIAQL----E---KEYAIKEKSKQQNE----EELVKI--------------IEQLKEQTEEFD---------------------NLTKGIQYLELGVSISQVEKELAQNEQLLKEQ---------------QAI------LEKIQQQTRAGYDKIQKIKA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FEETCKYRKQALEKNYAEA-IA-------------------------------RYDQAEERYCRALVELEVKNGLLKDIQEYLEELDKTLINYHKDKMEQINKCIADTWKKIYQGQ-----------------------DIVKVEIKAEEA-E------------G--------------RGKKIYNYRIVMFIYDEKD-------KDLKEIDMKG-------------RCSAGQK-----------------------------------VL------------ASIIIRLAL-----------------------------AEAFTMNC---------------------GILALD-------------EPTTNLDKLHAQKLGE---------------------------------------------QLC---EL----IESRKG--------QSSFQLIIIS-------HDKDFIHLMQQRQHCSD--------------------FYY--VYKEN-GCSLIERR---------------------------------------TYKNALMN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KQTD---------------------------------------------------------------------------------------------------------------------   [1303]
'gi|4008379|emb|CAB01581.1| Hypothetical protein T04H1.4 [Caenorhabditis elegans] >gi|17563838|ref|NP 506070.1| RADiation sensit'    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M--------------------------------------------------------------A------------------------------------------------------------------KFLRLHIRGIRS-----V------------------------------------------------------------------GD-EDH---------D-------VHKIDFLSPCTLISGPNGTGKT------------------T----------------TIEALNFVTT--GQ----------------------------MPTQ---KKQNFIHSTDVARKT-----------------------------------------RVDASVTL----------------------------------------------------------------------------------------------------------------EFID------V-KGRECTAVRRLVVTSGT------------K--------------------------------------------------------AAA-----LAEEHTLAIKYP---DGT--------VNTLS-SKVCDF-NTALL--------------------------------------------------------------------------------------------------------------------------------------------KHLGVPR----------------------------------------------------------------------------------------------------------------------------------------------AVFKYVIFCH-----------------------------------------------------------------QEDSTWPLSEPKEL----------KKRFDDIFQLTK---------------------------FVKAQERMKK-----I---------VLDFKKEMQTHEMSKQLYETHVRDKL-----------VARQNQEECERKISKRKEETDELKER-KANGQ----------------------------------------------------------KKIEEMRTSIHE---------------------LEDTLTSFKKTELERQNLKKQLSLI---------RVE----------------PYFGTEEELK-RE----IEEFRGSEGRSYGEERARIQKKIGKNNQERQELS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QKKTEFENRISSLKAEVIHCQSLKYDLE---RLEN---------------------QLRSELDL-------------------------------------------------------------------------------------------------------------------------------EHDADIDIEIDNAITLKIRGMSDKARMIAK------------------NCAELQSNLRTAQEAATKIEVEMKTL-------------QNEKVKLEKEVEQLKFKIKQGQNATAGMKDLLK--------------KEEALRKSLADLPLLDENALTE----CKLKREKYLKQLD-------ILKKKCAEAEKNAEKDREK--------------ESLKQTLSIAR-KKMTAY------------------------------------------QRIYDNNWQGLI-----GQAPDFPWTPI----------------------LSKTFHKLRNDKKIMEEDLRDVQLN-------------VQKL-----------------------------E---TMQHQYRKQEESLTAQELKLSENI---------F-----EACSCE----AEEVSEKLENLR-----------------KRLKKARK--------------------------------------------------------------------------------------------DLAPLSAKSNLYDSYIEES-------------------KSSGCCPLCDRDFKTK------------KEINEFSKKLE---NMTLSF-PTEQEELEKLVS---KLEKEEIIIVKAE-GQANELQRI----VKELKEV----REKNRKLSTEMAEEKSNLSKNEK---------------QLETVNA---------------KLKLA---EDLQTDVGVIQQLYEQTE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ENE----------------------KRYEQLVSESD------------------SSDGLSYTELRKKVEDKDEEYRKI----------------------VQEGEELQKCSEERNKLQSKLNELGTHRVSLGEAAAQAGA---------F-------------------AEQLETKIKEIQEC------ITAISQKRNEDLPDAQFKKDDLTRNVSSKEEEKKKAE----------------------------------------------MEVQMMKKELDQKIFHRKS----LFKKVQEGGL-------CERQLMDKENNIATL----N---ASLEENQQRQKRFE----EDLRSF------------------DSSHQRES---------------------ILKDQLTRMIIENKIKELKRTLATFDGQINED-----------------R------ITEQKQAYNKLQNELRLIGN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EEV-------------------------------KIYTQMQEYEKQKKIAEAKL-ST------------------------------KECQNAESNYRDAIIELAITKESISDLTKYRNCLDASLIQFHSEKMGRVNGIIDDLWRKVYNST-----------------------DITTIRIRSDA-------------------------TSETSSKKVAYEYNVMMVH------------ETGTEVEMRG-------------RCSAGQK-----------------------------------ML------------ASLLIRIAL-----------------------------AEVFGGSC---------------------SMIALD-------------EPTTNLDESKVEGMAI---------------------------------------------VLA---DI----IAERRGFDENGKLRGRDMQMVVIT-------HDERLVNRITISCRPEY--------------------IYC--LGKDEHGISFLSKR---------------------------------------YPDGTVKR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VNTKRRF------------------------------------------------------------------------------------------------------------------   [1298]
;
END;


BEGIN CODONS;
	CODESET  * UNTITLED = Universal: all ;
END;


BEGIN ASSUMPTIONS;
	OPTIONS  DEFTYPE=unord PolyTcount=MINSTEPS ;
	EXSET * UNTITLED  =  1-4233 4296-4318 4330-4363 4373-4385 4396-4408 4416-4450 4453-4464 4474-4502 4511-4531 4538-4550 4567-4611 4615-4617 4620-4623 4630-4637 4648-4654 4665-5411;
END;


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	PrettyPrint 10;
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END;