#NEXUS [MacClade 4.08 registered to M. Hasebe, NIBB] BEGIN DATA; DIMENSIONS NTAX=19 NCHAR=2185; FORMAT DATATYPE=PROTEIN SYMBOLS = " 1 2 3 4" MISSING=? GAP=- ; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 1510 1520 1530 1540 1550 1560 1570 1580 1590 1600 1610 1620 1630 1640 1650 1660 1670 1680 1690 1700 1710 1720 1730 1740 1750 1760 1770 1780 1790 1800 1810 1820 1830 1840 1850 1860 1870 1880 1890 1900 1910 1920 1930 1940 1950 1960 1970 1980 1990 2000 2010 2020 2030 2040 2050 2060 2070 2080 2090 2100 2110 2120 2130 2140 2150 2160 2170 2180 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] 'gi|15233432|ref|NP 193822.1| MS5 (MALE-STERILE 5) [Arabidopsis thaliana] >gi|7268886|emb|CAB79090.1| putative protein [Arabidop' ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MCPCVERRAPPGVYYTPPPARTSDHVAAMPMTERRRPPYSCSSSSERRD----PFHIVHKVPSG---------------------------DSPYVRAKHAQ-------------------------------------------LIDKDP----------------------------------------------------------------NRAISLFWTAINAGD---------RVDSA--------LKDMAVVMKQLGRSDE-------GIEAIKSFRYLCS-----FESQDSIDNLLLELYK---KS-------------------------------GRIEEEAV------LLEHKLQTLEQGMGFGGRVSRAKRVQGKHV--------IMTIEQEKARIL--------------GNLGW-VHLQLHNYGIAEQHY-----------------------------------RFGFVTKIPNIDYCLVMRALGLERDKNKLCN-LAI------CLMRMSRIPE--------AKSLL-DDVRD-SPAESECGDEPFAKS--YDR-----------AVEMLAEIESKKPEADLSE--------KFYAGCSFVNRMKENI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------APGTANKNYSDVSSSPASVRPNSAGLYTQPRRCRLFEEE---------------------------------------------------------------------------------------------------TRGAARKLLFGKPQPFGSEQMKILERGEEEPMKRKKLDQNMIQYLHEFVKDTADGPKSESKKSWADIAEEEEAEEEEEERLQGELKTAEM--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [450] 'gi|3859112|gb|AAC72541.1| male sterility MS5 [Arabidopsis thaliana]' ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MCPCVERRAPPGVYYTPPPARTSDDVAAMPMTERRRPPYSCSSSSERRD----PFHIVHKVPSG---------------------------DSPYVRAKHAQ-------------------------------------------LIDKDP----------------------------------------------------------------NRAISLFWTAINAGD---------RVDSA--------LKDMAVVMKQLGRSDE-------GIEAIKSFRYLCS-----FESQDSIDNLLLELYK---KS-------------------------------GRIEEEAV------LLEHKLQTLEQGMGFGGRVSRAKRVQGKHV--------IMTIEQEKARIL--------------GNLGW-VHLQLHNYGIAEQHY-----------------------------------R----------------RALGLERDKNKLCN-LAI------CLMRMSRIPE--------AKSLL-DDVRD-SPAESECGDEPFAKS--YDR-----------AVEMLAEIESKKPEADLSE--------KFYAGCSFVNRMKENI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------APGTANKNYSDVSSSPASVRPNSAGLYTQPRRCRLFEEE---------------------------------------------------------------------------------------------------TRGAARKLLFGKPQPFGSEQMKILERGEEEPMKRKKLDQNMIQYLHEFVKDTADGPKSESKKSWADIAEEEEAEEEEEERLQGELKTAEM--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [434] 'gi|4028970|gb|AAC97106.1| pollenless3 [Arabidopsis thaliana]' ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MCPCVERRAPPGVYYTPPPARTSDHVAAMPMTERRRPPYSCSSSSERRD----PFHIVHKVPSG---------------------------DSPYVRAKHAQ-------------------------------------------LIDKDP----------------------------------------------------------------NRAISLFWTAINAGD---------RVDSA--------LKDMAVVMKQLGRSDE-------GIEAIKSFRYLCS-----FESQDSIDNLLLELYK---KS-------------------------------GRIEEEAV------LLEHKLQTLEQGMGFGGRVSRAKRVQGKHV--------IMTIEQEKARIL--------------GNLGW-VHLQLHNYGIAEQHY-----------------------------------R----------------RALGLERDKNKLCN-LAI------CLMRMSRIPE--------AKSLL-DDVRD-SPAESECGDEPFAKS--YDR-----------AVEMLAEIESKKPEADLSE--------KFYAGCSFVNRMKENI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------APGTANKNYSDVSSSPASVRPNSAGLYTQPRRCRLFEEE---------------------------------------------------------------------------------------------------TRGAARKLLFGKPQPFGSEQMKILERGEEEPMKRKKLDQNMIQYLHEFVKDTADGPKSESKKSWANFAEEEEAEEEEEERLQGELKTAEM--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [434] 'gi|15241471|ref|NP 199246.1| unknown protein [Arabidopsis thaliana] >gi|67633856|gb|AAY78852.1| male sterility MS5 family prote' -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRRRESRGAKGGGFLTPPPSWHTTRRVYIAMPISERKRSPLIENQESFRVRTG---------------------------DSPYVRAKHAQ-------------------------------------------LVSKDP----------------------------------------------------------------NRAISLFWAAINAGD---------RVDSA--------LKDMVVVLKQLNRFDE-------GIEAIKSFRYLCP-----FESQDSIDNLLLELYM---KS-------------------------------GRITEVAE------LLEHKLRTLEQDKHYGGRIKIAKRSHEEQN--------NKTIEQEKARIL--------------GNLAW-VHLQLHNYGIAEQYY-----------------------------------R----------------NALSLEPDNNKLCN-LAI------CLIRMERTHE--------AKSLL-EDVKQ--SLGNQWKNEPFCKS--FER-----------ATEMLAEREQATVADKPEDLLTSSFSDNFSSRCSGGMKGKKAL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTSTELGNIHKTNSHASSESVEQNSPGLTTQPRECKWVDEE---------------------------------------------------------------------------------------------VDQSKWDATIGASRKLRFWTVGPVRSLRFGNDYQKNLKSVGTAASTTNDELHQFISSDADCMTSKARKLCPELIKDKEDNEKESERIASESSSAYAKITDIGQRKVLHIDQRKVRHIGQRSV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [469] lcl|Smo_MS5_1_1_unnamed_protein_product -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IGTLDSVMGLPKELTHTLIRDSLSRNKEPNKMSKSAPCSPVKP------LVAAGKRPPSRAD----SFHVIHKVPLG---------------------------DSPYVRAKHVQ-------------------------------------------LVDKEP----------------------------------------------------------------DKAIALFWAAINAGD---------RVDSA--------LKDMAIVMKQQNRPEE-------AIEAIKSLRGRCS-----DQAQESLDNVLLDLYK---RC-------------------------------GRLDDQIA------LLKHKLQLIYAGLAFNGKRTKTARSQGKKF--------QVSIEQEATRLL--------------GNLGW-AYMQQSDFIAAEAVY-----------------------------------R----------------KALSMEPDNNKMCN-LGI------CLMKQGRVDE--------AKVLL-KSVMP-ASSDTRWGADSHLKS--YER-----------AQEMLAEMEQGQQHQPQH-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPSTGILRLVAHAPQAQSKLKQE--------------------------------------------------------------------------------------------------------IEIHQHRLQQQQQQTQPRSQQIPTYDSWDYEEEEEEEYNLVDDAD----ENANVNIIAQQQQDHHFLAAEALKKKLELLCVNA--NSNSGAITTNASSNSLKFSPSK----------------------------------------------------------------------------------------------------------------------PPRPSATARRSLSLESFDNLG---------------AAPPGNASLRPPPGISKSAASSPVKQQLFSGGDSDDR?--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [478] lcl|Smo_MS5_2_1_unnamed_protein_product -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IGTLDSVMGLPKELTHTLIRDSLSRNKEPNKMSKSAPCSPVKP------LVAAGKRPPSRAD----SFHVIHKVPLG---------------------------DSPYVRAKHVQ-------------------------------------------LVDKEP----------------------------------------------------------------DKAIALFWAAINAGD---------RVDSA--------LKDMAIVMKQQNRPEE-------AIEAIKSLRGRCS-----DQAQESLDNVLLDLYK---RC-------------------------------GRLDDQIA------LLKHKLQLIYAGLAFNGKRTKTARSQGKKF--------QVSIEQEATRLL--------------GNLGW-AYMQQSDFIAAEAVY-----------------------------------R----------------KALSMEPDNNKMCN-LGI------CLMKQGRVDE--------AKVLL-KSVMP-ASSDARWGADSHLKS--YER-----------AQEMLAEMEQGQQHQPQH-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPSTGILRLVAHAPQAQSKLKQE--------------------------------------------------------------------------------------------------------IEIHQHRLQQQQQQTQPRSQQMPTYDSWDYDEEEEEEYNLVDDAD----ENANVNIIAQQQEDHHFLAAEALKKKLELLCVNANSNSNSGAMATNTSSNSLKFSPSK----------------------------------------------------------------------------------------------------------------------PPRPSATARRSLSLESFDNLGVSFDRWTHESLVLVAAAPPGNASLRPPPGISKSAASSPVKQQLFSGGASDDR?--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [495] 'gi|50726663|dbj|BAD34381.1| putative pollenless3 [Oryza sativa (japonica cultivar-group)]' ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MMQQQQQQETWLAAAAAVGLRPTKSAPCSPIKPAESSASAAAAAAMLRTNSD----SFHVAHKVPVG---------------------------DTPYVRAKRVQ-------------------------------------------LVDKDP----------------------------------------------------------------EKAIALFWAAINAGD---------RVDSA--------LKDMAIVMKQQNRAEE-------AIEAIKSLRSRCS-----DQAQESLDNILLDLYK---RC-------------------------------GRLDDQIS------LLKHKLQLIHQGHAFNGKRTKTARSQGRKF--------QVTLEQEATRLL--------------GNLGW-ALMQKENYTEAEGAY-----------------------------------R----------------RALLIGPDNNKMCN-LGI------CLMKQGRVLE--------AKDVL-KQVRP-AGVDGLRGADSHLKA--YER-----------AQEMLRDLEAKLVGRRLPRAGDQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVDKSWLFDALLLG---SSSSIWQPQPCIDHMLPPPPPPPRD-------QFADENAAAAAANKKAAAAALQPNILRVDAQ---------------------------------------------------------------------------PFYSLRMPPLATKPQNIQQKPPTPQPQVHDPMGNLKRTRSGNAMDKAAAAAAGPVEKEPINDENSGRRKSLSAEE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RWPELPDHSAFDEALVAAVLAPVLDDSAAAAAERNDNCCKPAPPAGCDTSPAMKEKIGKRLRIFQDITQTLNTF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [515] lcl|Ppa_MS5_1_1_unnamed_protein_product -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ETDSSTSIIPIHNPEERHIEAITISWVKLPAVSCCQHCEYFSSSLDPRKQLNCANSAVAISAAYLSEAFQLQECEIAQRHCSACTESAVSDSQIRMMWGEQYLQPAAGHMPYGGRVTKSAPCSPVKP---------PSKRLSARAD----SFHVVHKVPVG---------------------------DTPYVKAKHVQ-------------------------------------------LVDKDP----------------------------------------------------------------DRAIALFWAAINAGD---------RVDSA--------LKDMAIVMKQQNRPQE-------AIEAIKSLRSRCS-----DQAQESLDNVLLDLYK---RC-------------------------------GRLDDQID------LLKHKLHLIHQGMAFNGKRTKTARSQGKKF--------QVSIEQEATRLLVRMSCPLVVVVVVQGNLGW-AHMQQSNFVAAEAVY-----------RDIGEVRQEMMYALTVVRACVPVGR----------------KALSIEPDNNKVCN-LGI------CLMKQGRLEE--------AKAML-QSVT--RCNDNRWASDSHLKS--YDR-----------AQEMLQDLEASMGAKG-HEKAVED--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L--RSFAIPGFEGGYDLQHSSLWQPQPAMPRQPRRMARSNLE-------QQFSQSVEPPMSGALLATAGFGPSQQKSGYQ------------------------------------------------------------------------------------------------APATPRGQAHAASQQGDETWFQ----SGVRAGWSDEELDHSSLEVEDAL----NVQGEQSVQGFLGSSKQPMNW-HAETLRQRLETVSVLG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TRS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [574] lcl|Ppa_MS5_8_1_unnamed_protein_product -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTRAPCSPMKP--------TSKVLPISRGD----PFHVVHKVPVG---------------------------DSPYVKAKHVQ-------------------------------------------LVDKDP----------------------------------------------------------------DRAIALFWAAINSGD---------RVDSA--------LKDMAIVMRQQNRPQE-------AIEAIKSLRSRCS-----DQAQESLDNVLLDLYK---RC-------------------------------GRLDDQID------LLRHKLHLIHQGLAFNGKRTKTARSQGKKF--------QVSVKQEATRLL--------------GNLGW-AYMQQLNFVAAEAVY-----------------------------------R----------------KALSIETDINKVCN-LGI------CLMKQGRLEE--------AKAAL-QRVTV-AYSGIRWASDSQLKS--YER-----------AQDLLKELGSSIGLKGSHDDILQQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L--SSFTIPG------------CNSDPAMPRQPRRASRSGLE-------QVSRSNIDPSMSGAFVATSGFGPAHHT-----------------------------------------------------------------------------------------------------------RHDMTGSYRTQSWLQDGSCSGSSSGWDEDDFDDASLDEFSDGSDFQGYPQESISSNPIASENEEMQWHVETSLREWLEKAIALKNGLYERQLGME-----?---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [418] lcl|Ppa_MS5_7_1_unnamed_protein_product ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RALSIESDVNKVCN-FGV------CLMKQGRLEE--------AEAVL-QRVTV-AYSGIRWASDSHLKS--YER-----------AQDLLKELESSIGLKGSHDDILQQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L--SSFTIPG------------CNSDPAIPRQPRRASRSALE-------QVSRSNIDPSMSGAFVATSGFGPAHHT-----------------------------------------------------------------------------------------------------------RLDMTGSYRTQSWLQDGSCSGNSSGWDEDDFDDAFPVECSDVSDFQGYPYEFISSNLTATENEEMQWHIETSLREWLDKAIALKNGLSERQLGME-----?---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [230] lcl|Ppa_MS5_4_1_unnamed_protein_product -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------?----------------KALLIESDDNKVCN-FGV------CLMKQGRLEE--------AEAVL-QRVTV-ACSGIRWASDSHLKS--YER-----------AQDLLKELESSIGLKGSHDDILQQLSSFTISGCNTDLLQDLALRIIPDWRWPGAIEHSLGCKMVAALEVPVVGMKMISMTHLLMNALSDF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [146] lcl|Ppa_MS5_5_1_unnamed_protein_product -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNVNPQVAGEK-------------------------------------R----------------KAWSIEFDVNKVCN-FSV------CLMKQGRLEE--------AEAVL-QRVTV-ACTGIRWPSDSHLKS--YER-----------AQDLLKELESSIGLKGSHDDILQQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L--SSFTIPG------------CNSDPAMPRQPRRASRSALE-------KLSRSNIDPSMSGAFVATSGFGPAHHT-----------------------------------------------------------------------------------------------------------RLDMTGSYRTQSWLQDGSCSGSSSGWDEDEFDDASPDECSDG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [188] lcl|Ppa_MS5_6_1_unnamed_protein_product -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------?----------------SELSIESDVKKICN-FGV------CLMKQGRLEE--------AEAVL-QRVTV-ACSGIRWPSDSHLKS--YER-----------AQDLLKELESSIGLKGSHDDILQQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L--SSFTIPG------------CNSDPAMPRQPRRASRSALE-------QVSRSNIDPSMSGAFVATSGFGPAHHI-----------------------------------------------------------------------------------------------------------RLEMTGSYRTQSWLQDGSCSGSSSGWDEDDFDDASPDECSDGSDFQEYPHEFIGCNPTATENEEMQWHVETSLREWLDKAIALKNGLSERQLGMEGESEAH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [236] lcl|Ppa_MS5_9_1_unnamed_protein_product -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------?C-------------------------------------WTSSSLDPRKQLNCANSAVANSAAYLSEAFQLQVCETAQQHCSACTGSAVSDSQIRMMWGEQYPQPAVGHMLYGVRVTKSAPCSPVKP---------PSKRLSARAD----SFHVVHKVPVG---------------------------DTPYVKAKHVQ-------------------------------------------LVDKDP----------------------------------------------------------------DRAIALFWAAINAGD---------RVDSA--------LKDMAIVMKQQNRPQE-------AIEAIKSLRSRCS-----DQAQESLDNVLLDLYK---RC-------------------------------GRLDDQID------LLKHKLHLIHQGMAFNGKRTKTARSQGKKF--------QVSIEQEATRLLVRMSCPLVVVVEVQGNLGW-ACMQQSNFVAAEAVY-----------------------------------R----------------KALSIEPDNNKVCN-LGI------CLMKQGRLEE--------AKAML-QSVT--RCNDNRWASDSHLKS--YDR-----------AQEMLQELEASMGAEG-HEKAVEE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L--RSFAIPGFEGGYDLQHSSFWQPQPAMPRQPRRMARSNLE-------QQFSQSVEPSMSGALLATAGFGPSQQKSGYQ------------------------------------------------------------------------------------------------APATPRVRAHAAKQQGDETWFQ----SG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [452] 'gi|3859114|gb|AAC72542.1| MS5-like protein [Arabidopsis thaliana]' ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKHKLFLIQKGLAFNGKRTKTARSQGKKF--------QVSVEQEATRLL--------------GNLGW-ALMQRDNFVEAEDAY-----------------------------------R----------------RALSIAPDNNKMCN-LGI------CLMKQGRIDE--------AKETL-RRVKP-AVVDGPRGVDSHLKA--YER-----------AQQMLNDLGSEMMRRGGDDKVEQR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------R--LFDAIFG--------SSSIWQPQPCSEQTVKAKPKPGLSNGDGYGDENVKMSVNPVVVNPLRVDAKPFFSSKLV----------------------------------------------------------------------------------------------------------ISNNEKLKRTRSSSQGMGMLSGIGGDHEGETNTSTRRRLSMEKKATECG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPDNKDFEDAIMAAVLGTETKVDKKRLQGVPGYHFVSQSESLTTLIILSF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [307] 'gi|15230439|ref|NP 190696.1| unknown protein [Arabidopsis thaliana] >gi|6562280|emb|CAB62650.1| MS5-like protein [Arabidopsis t' -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MMRDVFRPTKSAPCSPAKPLGIS----------RTQSE----SFHAIHKVPVG---------------------------DSPYVRAKNVQ-------------------------------------------LVEKDP----------------------------------------------------------------ERAIPLFWKAINAGD---------RVDSA--------LKDMAIVMKQQNRAEE-------AIEAIKSLRVRCS-----DQAQESLDNILLDLYK---RC-------------------------------GRLDDQIG------LLKHKLFLIQKGLAFNGKRTKTARSQGKKF--------QVSVEQEATRLL--------------GNLGW-ALMQRDNFVEAEDAY-----------------------------------R----------------RALSIAPDNNKMCN-LGI------CLMKQGRIDE--------AKETL-RRVKP-AVVDGPRGVDSHLKA--YER-----------AQQMLNDLGSEMMRRGGDDKVEQR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------R--LFDAIFG--------SSSIWQPQPCSEQTVKAKPKPGLSNGDGYGDENVKMSVNPVVVNPLRVDAKPFFSSKLV----------------------------------------------------------------------------------------------------------ISNNEKLKRTRSSSQGMGMLSGIGGDHEGETNTSTRRRLSMEKKATECG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPDNKDFEDAIMAAVLGTETKVDKKRLKVF---------QDITLCLNQSL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [430] lcl|Ppa_MS5_2_1_unnamed_protein_product ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MCISKSTPVSPTKP-----ASKPIAYKPAARND----AFHIVHNVPMG---------------------------NSPYVKAKHVQ-------------------------------------------LVDKDP----------------------------------------------------------------DRAIALFWEAINSGD---------RVDSA--------LKDMAIVMKQKSRPHE-------AIEVIKSLRSRCS-----DRAQESLDNVLLDLYK-------------------------------------------------------LYLIHQGIAFNGKRRKIARSQGKKF--------QVSIEQQATRLL--------------GNLGW-AYMQQSKFLAAEAVY-----------------------------------R----------------KALLIESDVNKVCN-LGI------CLMKQGRLEE--------AKSIL-RSVIL-PCNDRRWTSDSHLKS--FER-----------AQEMMEKLESSVAIKGNSDDIFKQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------V--NSFAIPGYVTDAIVHDSISRQPQPGLRLHPCRITKSALE------SKQVQCNVDPSISGPLVATSGFGLAQSDA----------------------------------------------------------------------------------------------------------TPDMTGNFRRQAWLQGGSCSGTSGGWIEDDLYYTSPDESSDGSDIHEWPLDF-KYYLNDTENDETQFSVQNNLRMRSESAIDLKRELCNSQL?------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [419] lcl|Ppa_MS5970736876_1_unnamed_protein_product ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------?IAFNGKRRKIARSQGKKF--------QVSIEQQATRLL--------------GNLGW-AYMQQSKFLAAEGVY-----------------------------------R----------------KALLIESDVNKVCN-LGI------CLMKQGRLEE--------AKSIL-RSVIL-PCNDRRWTSDSHLKS--FER-----------AQDMMEKLESFGAIKGN?-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [125] lcl|Smo_MS5_5_1_unnamed_protein_product ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GNLGW-AYTEHRSLDESIDH-----------------------------------------------------KLCIIKPDNNEMCN-LGI------CLIKQCCVDE--------DKVLL-KSITK-QQTQPESQQMPTYDSWDYEE-----------EEEYNLDLAVEALKKKLE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLCVNANSNAKQQPKLLRHRQKLFLIHSPDGRSTHDGSRFGCSSSSWQYFSTTTTRNLQVGGFLSRKAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [165] ; END; BEGIN CODONS; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE=unord PolyTcount=MINSTEPS ; EXSET * UNTITLED = 1-808 823 827-832 843-850 856 861-863 878-879 883-893 910-2185; END; BEGIN MacClade; Version 4.0 87; LastModified -1063230214; FileSettings editor '0' '0' '1' '1'; Singles 100; Editor 00011001111111100100010010 '1' '8' Geneva '9' '490' '1' all; EditorPosition '70' '12' '915' '1521'; TreeWindowPosition '46' '6' '985' '1630'; ListWindow Characters closed Geneva '9' '50' '10' '273' '366' 000; ListWindow Taxa closed Geneva '9' '50' '10' '145' '490' 100000000; ListWindow Trees closed Geneva '9' '50' '10' '276' '490' ; ListWindow TypeSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow ExSets closed Geneva '9' '50' '25' '129' '181' ; ListWindow CharSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow TaxSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow CharPartitions closed Geneva '9' '50' '10' '276' '490' ; ListWindow CharPartNames closed Geneva '9' '50' '10' '276' '490' ; ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ; ChartWindowPosition '52' '30' '942' '1220'; StateNamesSymbols closed Geneva '9' '10' '50' '30' '148' '220'; WindowOrder Data; OtherSymbols &/ 00 ?-; Correlation '0' '0' '1000' '0' '0' 10011010; Salmo 00000001; EditorFile '4'; ExportHTML _ MOSS '100' 110000; PrettyPrint 10; EditorToolsPosition '827' '52' '115' '165'; TreeWindowProgram 10; TreeWindow 0000; Continuous '0' '3' 1; Calculations 0000001; SummaryMode '0' '0' 0; Charts Geneva '9' (normal) 0010; NexusOptions '0' '0' '50' 001011001; TipLabel '1'; TreeFont Geneva '9' (normal); TreeShape 1.0 1.0 0100; TraceLabels 0101; ChartColors '0' '0' '65535' '9' '0' 1; ChartBiggestSpot 1; ChartPercent 10; ChartBarWidth '10' 1; ChartVerticalAxis 10101; ChartMinMax '0'; TraceAllChangesDisplay '1' 1; BarsOnBranchesDisplay '0' '0' '60000' '10000' '10000' '10000' 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