#NEXUS [MacClade 4.08 registered to M. Hasebe, NIBB] BEGIN DATA; DIMENSIONS NTAX=15 NCHAR=3870; FORMAT DATATYPE=PROTEIN SYMBOLS = " 1 2 3 4" MISSING=? GAP=- ; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 1510 1520 1530 1540 1550 1560 1570 1580 1590 1600 1610 1620 1630 1640 1650 1660 1670 1680 1690 1700 1710 1720 1730 1740 1750 1760 1770 1780 1790 1800 1810 1820 1830 1840 1850 1860 1870 1880 1890 1900 1910 1920 1930 1940 1950 1960 1970 1980 1990 2000 2010 2020 2030 2040 2050 2060 2070 2080 2090 2100 2110 2120 2130 2140 2150 2160 2170 2180 2190 2200 2210 2220 2230 2240 2250 2260 2270 2280 2290 2300 2310 2320 2330 2340 2350 2360 2370 2380 2390 2400 2410 2420 2430 2440 2450 2460 2470 2480 2490 2500 2510 2520 2530 2540 2550 2560 2570 2580 2590 2600 2610 2620 2630 2640 2650 2660 2670 2680 2690 2700 2710 2720 2730 2740 2750 2760 2770 2780 2790 2800 2810 2820 2830 2840 2850 2860 2870 2880 2890 2900 2910 2920 2930 2940 2950 2960 2970 2980 2990 3000 3010 3020 3030 3040 3050 3060 3070 3080 3090 3100 3110 3120 3130 3140 3150 3160 3170 3180 3190 3200 3210 3220 3230 3240 3250 3260 3270 3280 3290 3300 3310 3320 3330 3340 3350 3360 3370 3380 3390 3400 3410 3420 3430 3440 3450 3460 3470 3480 3490 3500 3510 3520 3530 3540 3550 3560 3570 3580 3590 3600 3610 3620 3630 3640 3650 3660 3670 3680 3690 3700 3710 3720 3730 3740 3750 3760 3770 3780 3790 3800 3810 3820 3830 3840 3850 3860 3870] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .] 'gi|30696025|ref|NP 199936.2| EMF2 (EMBRYONIC FLOWER 2); transcription factor [Arabidopsis thaliana] >gi|22655274|gb|AAM98227.1|' M---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGIPLVSRETS------SCSRSTEQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MCHEDSRLRISEEE--EIAAEESLAAYCKPVELYNIIQRRAIRN-----------------------------------PLFLQRCLHYKIEAKHKRRIQMTVFLSGAIDAGVQ-----------------------TQKLFPLYILLARLVS-PKPVAEYSAVYRFSRACILTGGLGVDGVSQAQANFLLPDMNRLALEAKSGSLAILFISF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAQNSQFGIDSGKIHSGNIG------GHCLWSKIPL-------------------------------------------------------------QSLYASWQKSPNMDLGQRVDTVSLVEMQPCFIKLKSMSEEKCVSIQVPSNPLTSSSPQQVQVTISAEEVGSTE--KSPYSSFSYNDISSSSLLQI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRLRTGNVVF------------------------------------NYRYYNNKLQKTEVT------EDFSCPFCLVK-------------------------------------------------------------------------------------------------CASFKGLRYHLPSTHDLLN---FEFW--------------------------VTEEFQA--VNVSLKTETMISKVNE-DDV----DPKQQTFFFS-----RRRQKSQVRSSRQG---------------------------------------------------------------------------------------------------------------PHLGLGCEVLDKTDDAHSVRSEKSRIPPGKHYERIGGAESGQRVPPGTS---------------------------------------------------------PADVQSC---------------GDPDYVQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SIAGSTML------QFAKTRKISIERSDLRNRSL-LQK----------------------------------------------------------------------------------------------RQFFHSHRAQPMALEQV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSDRDSE--------------------------------------D-----------------------------------------------------------------------------------EVD--DDVADFEDR-----------------------------------RMLDDFVDVT--------------------------------------------K-DEKQMMHMWNSFVRKQR----------------------------------------------VL---------------------ADGHIPWACEAFSRLHGPIMVRTPH---------LIW-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CWRVFM------------------------VKLW---------------NHGLL----DARTMNNCNTF------LEQLQI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [626] 'gi|30696023|ref|NP 851168.1| EMF2 (EMBRYONIC FLOWER 2); transcription factor [Arabidopsis thaliana] >gi|14276052|dbj|BAB58957.1' M---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGIPLVSRETS------SCSRSTEQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MCHEDSRLRISEEE--EIAAEESLAAYCKPVELYNIIQRRAIRN-----------------------------------PLFLQRCLHYKIEAKHKRRIQMTVFLSGAIDAGVQ-----------------------TQKLFPLYILLARLVS-PKPVAEYSAVYRFSRACILTGGLGVDGVSQAQANFLLPDMNRLALEAKSGSLAILFISF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAQNSQFGIDSGKIHSGNIG------GHCLWSKIPL-------------------------------------------------------------QSLYASWQKSPNMDLGQRVDTVSLVEMQPCFIKLKSMSEEKCVSIQVPSNPLTSSSPQQVQVTISAEEVGSTE--KSPYSSFSYNDISSSSLLQI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRLRTGNVVF------------------------------------NYRYYNNKLQKTEVT------EDFSCPFCLVK-------------------------------------------------------------------------------------------------CASFKGLRYHLPSTHDLLN---FEFW--------------------------VTEEFQA--VNVSLKTETMISKVNE-DDV----DPKQQTFFFSSKKFRRRRQKSQVRSSRQG---------------------------------------------------------------------------------------------------------------PHLGLGCEVLDKTDDAHSVRSEKSRIPPGKHYERIGGAESGQRVPPGTS---------------------------------------------------------PADVQSC---------------GDPDYVQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SIAGSTML------QFAKTRKISIERSDLRNRSL-LQK----------------------------------------------------------------------------------------------RQFFHSHRAQPMALEQV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSDRDSE--------------------------------------D-----------------------------------------------------------------------------------EVD--DDVADFEDR-----------------------------------RMLDDFVDVT--------------------------------------------K-DEKQMMHMWNSFVRKQR----------------------------------------------VL---------------------ADGHIPWACEAFSRLHGPIMVRTPH---------LIW-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CWRVFM------------------------VKLW---------------NHGLL----DARTMNNCNTF------LEQLQI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [631] 'gi|62148938|dbj|BAD93353.1| embryonic flower 2 [Silene latifolia]' M---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGIPLVARETM-----YGQSRSGDQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SCRQDSRVHMSAEE--EVAAEQSLSVYCKPVELYNILQRRSVRN-----------------------------------PLFLQRCLHYKVRARCHKRMRMSVSLSETLDDGLQ-----------------------VSRLFPVHIILARLLS-DVPSSERTAGYRYTSVRTLTNSSREEGGNGARANFILPEMNKLLREANPGSLFILFISY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ARPYASN-GFDPSREHPNILSFPSTAEKPCLWGKISM-------------------------------------------------------------KSLFLSWEKVPNLSRGDRAEMLSTVDLHPCVLKCGFAGELSCISFHVPENSSDMNTLSQVQVTISAEERGAKE--KSPYSPCTYNNVRASP-SHV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LGLRTGNVIF------------------------------------NYRYYNNKLQRTEVT------EDFSCPFCLV-------------K------------------------------------------------------------------------------------CASFEGLKLHLPSFHDLFI---FEFW--------------------------VTEELQA--VNVSVKTDICRSELFG-SGI----DQKQLIFFFCHKPLKRRK---SKGLLDKA-----------------------------------------------------------------------------------------------------KHVQPLTLTSDIAAAASDLLNRADDAYSSRIERAR-----------------------S---------------------------------------------------------SSVNDSL---------------NDPDCIQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNVPGSTLAPPAML------QFAKTRKLS-ERSDNRSRAL-LEK----------------------------------------------------------------------------------------------RQFFHSHRAQPMALEQV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSDHDSE--------------------------------------D-----------------------------------------------------------------------------------EVD--DDVADLEDR-----------------------------------RLLDDFVDVS--------------------------------------------K-EEKQMMHLWNSFVRKQH----------------------------------------------VI---------------------ADGHIPWACEAFSRLHGPDLVQVPA---------LIW-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CWRLFM------------------------IKLW---------------NQGLL----DARSMNNCNQI------LDESHKQ-----------ET-----------------------DI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [630] 'gi|51091709|dbj|BAD36510.1| putative VEF family protein [Oryza sativa (japonica cultivar-group)]' M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CRHQPRARLSPDE--QLAAEESFALYCKPVELYNIIQRRSIKN-----------------------------------PAFLQRCLLYKIHARRKKRSLITISLSGGTNKELR-----------------------AQNIFPLYVLLARPTN-NVSLEGHSPIYRFSRACLLTSFHEFGNKDYTEATFVIPDVKNLA-TSRACSLNIILISC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GRAEQTFDDNNCSGNHVEG-STLQKLEGKCFWGKIPI-------------------------------------------------------------DLLASSLGNCVSLSLGHTVEMSSTVEMTPSFLEPKFLEDDSCLTF--CSQKVDATGSFQLQVSISAQEAGAKDMSESPYSVYSYNDVPPSSLTHI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRLRSGNVLF------------------------------------NYKYYNNTMQKTEVT------EDFSCPFCLV-------------P------------------------------------------------------------------------------------CGSFKGLGCHLNASHDLFH---YEFW--------------------------ISEECQA--VNVSLKTDSWRTELLA-EGV----DPRHQTFSYRSRFKKRKRVEI---SSDKI-----------------------------------------------------------------------------------------------------RHVHPHIVDSG-----------------------------------------------S---------------------------------------------------------PEDAQAG---------------SEDDYVQRENGS-SVAHAS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDPANSLHGSNLSAPTVL------QFGKTRKLSVERADPRNRQL-LQK----------------------------------------------------------------------------------------------RQFFHSHRAQPMALEQV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FSDRDSE--------------------------------------D-----------------------------------------------------------------------------------EVD--DDIADFEDR-----------------------------------RMLDDFVDVT--------------------------------------------K-DEKLIMHMWNSFVRKQR----------------------------------------------VL---------------------ADGHIPWACEAFSQFHGQELVQNPA---------LLW-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CWRFFM------------------------VKLW---------------NHSLL----DARAMNACNTI------LEGYLNG-----------SS--------------------DPKKN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [604] 'gi|62275661|gb|AAX78232.1| embryonic flower 2 [Triticum aestivum]' M---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGLPLPQSLNQNIGCEYAYPGSTGQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AFRQQLRTALSPDE--QLAAEESFALYCKPVELYNIIQRRAIRN-----------------------------------PAFLQRCLHYKIHASRKKRIQITVSLSRGTNTELP-----------------------EQNIFPLYVLLATPTS-NISLEGHSPIYRFSRACLLTAFSEFGNKGRTKATFIIPDIKNLS-TSRACNLNIILISCVSE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GQVGENRGEHNCSVDHVEG-SALQKLEGKCFWGKIPI-------------------------------------------------------------DLLGSSLENCVTLNLGHTVELASAVSMSPSFLEPKFMEQDSCLTF--CSHKVDATGSYQLQVGISAQEAGAKDMSESPYSSYSYSGVPPSSLPHI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRLRAGNVLF------------------------------------NFKYYNNTMQKTEVT------EDFACPFCLV-------------K------------------------------------------------------------------------------------CGSYKGLGCHLNSSHDLFH---FEFW--------------------------ISEECQA--VNVSLKTDVWRTELVA-EGV----DPRHQTFSYSSRFKKRRRLGMLGTTAEKI-----------------------------------------------------------------------------------------------------SHVHPHIMDSD-----------------------------------------------S---------------------------------------------------------PEDAQAV---------------SEDDFVQREEDDISAPRAS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDPAQSLHGSNLSPPTVL------QFGKTRKLSAERADPRNRQL-LQK----------------------------------------------------------------------------------------------RQFFHSHRAQPMALEQV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FSDRDSE--------------------------------------D-----------------------------------------------------------------------------------EVD--DDIADFEDK-----------------------------------RMLEDFVDVT--------------------------------------------D-DEKLIMHMWNSFVRKQR----------------------------------------------VL---------------------ADGHIPWACEAFSRLHGKHLVQNPP---------LLW-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SWRFLM------------------------IKLW---------------NHSLL----DARAMNVCGTI------LQGYQNE-----------SG-------------------LDPKKM---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [638] 'gi|29569111|gb|AAO84022.1| VEF family protein [Zea mays] >gi|60687422|gb|AAX35735.1| embryonic flower 2 [Zea mays]' M---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGLPLPQSLNQNIGCEYAYPGSTGQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AFRQQLRTALSPDE--KLTAEKDLALYCKPVELYNIIQRRAMKN-----------------------------------PLFIQRCLLYNIHARRKKRIQITISLSGSTNTELQ-----------------------THYVFPLYVLLARPTS-NLSLEGHSPIYRFSRVCLLTSFSEHGNKDNSEATFIIPDVKSLS-TSRACNHDIIFISC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GQVGQSNGEDNCSGNHVED-SSLQMLEGKCSWGKIPT-------------------------------------------------------------NLLASSLESCVNLSLGHIVELASKVTMRPSFLEPKFLEQDSCLTF--CSHKVDAVGSYKLQLCMSAQEAGARDMSLSPYSSYSYNDVPPSSLSDI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRLRSGNVLF------------------------------------NYKYYNNTMQETEVT------EDFSCPFCYV-------------R------------------------------------------------------------------------------------CGSFKGLGCHLNSSHDLFH---YEFW--------------------------ISEEYQV--VNVSLKADAWRTELFA-EGV----DPRHQTFSYRSRFKKRRR---SKNTMEKI-----------------------------------------------------------------------------------------------------RHVHSHIMESG-----------------------------------------------S---------------------------------------------------------PED-EAG---------------SEDNFVQGENGT-SVANAS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDPAQSLHGSNLSPPTVL------QFGKTRKLS-ERSDPRNRQL-LQK----------------------------------------------------------------------------------------------RQFFHSHRAQPMQLEQV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FSDRDSE--------------------------------------D-----------------------------------------------------------------------------------EVD--DDIADFEDR-----------------------------------RMLDDFVDVT--------------------------------------------K-DEKLIMHMWNSFVRKQR----------------------------------------------VL---------------------ADGHIPWACEAFSQLHGRQLIQNPA---------LLW-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GWRFFM------------------------IKLW---------------NHNIL----DARTMNTCNTV------LQILQEE-----------ST--------------------GLK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [626] 'gi|85062577|gb|ABC69154.1| EMF-like [Zea mays]' M---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGLPLPQSLNKNIGCEYAYPGSTGQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AFRQQLRTALSPDE--KLTAEKDLALYCKPVELYNIIQRRAMKN-----------------------------------PLFIQRCLLYNIHARRKKRIQITISLSGSTNTELQ-----------------------TDYLFPLYVLLARPTS-NLSLEGHSPIYRFSRVCLLTSFSEHGNKDSSEATFIIPDVKSLS-TSRACNLDIIFISC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GQVGQSNGEDNCSGNHVEA-SSLQMLEGKCSWGKIPT-------------------------------------------------------------NLLASSLESCVNLSLGHIVELASKVTMRSSFLEPKFLEQDNCLTF--CSHKVDAVGSYKLQLCMSAQEAGARDMSLSPHSSYSYNDVPPSSLSDI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRLRSGNVLF------------------------------------NYKYYSNTMQETEVT------EDFSCPFCYV-------------R------------------------------------------------------------------------------------CGSFKGLGCHLNSSHDLFH---YEFW--------------------------ISEEYQV--VNVSLKADAWRTELFA-EGV----DPRHQTFSYRSRFKKRRR---SKTTMEKI-----------------------------------------------------------------------------------------------------RHVHSHIMESG-----------------------------------------------S---------------------------------------------------------PGD-EAG---------------SEDNFVQGENGT-SVANAS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDPAQSLHGSNLSPPTVL------QFGKTRKLS-ERSDPRNRQL-LQK----------------------------------------------------------------------------------------------RQFFHSHRAQPMQLEQV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FSDRDSG--------------------------------------D-----------------------------------------------------------------------------------EVD--DDIADFEDR-----------------------------------RMLDDFVDVT--------------------------------------------K-DEKLIMHMWNSFVRKQR----------------------------------------------VL---------------------ADGHIPWACEAFSQLHGRQLIQNPA---------LLW-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GWRFFM------------------------IKLW---------------NHNIL----DARTMNTCNTV------LQILQEE-----------ST--------------------GLK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [626] 'gi|66796111|dbj|BAD99131.1| HvEMF2b [Hordeum vulgare]' M---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGLPLPARDAADTGCEFSYPQSADQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRHQQLRARLSPDE--QLAAEESFALYCKPVELYNIIQRRAIRN-----------------------------------PAFLQRCLHYKIHASRKKRIQITVSLSRGTNTELP-----------------------EQNVFPLYVLLATPTT-NISLEGHSPIYRFSWACLLTSFSECGSKGRTKATFTIPDIKNLS-TSRACNLNIILISCVSE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GQVEENVGEHNCSVNHVEG-SALQKLEGKCFWGKIPI-------------------------------------------------------------DLLGSSLENCVTLNLGHTVELASAVSMSPSFLEPKFMEQDSCLTF--CSHKVDATGSYQLQVGISAQEAGARDMSESPYSSYSYSGVPPSSLPHI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRLRAGNVLF------------------------------------NFKYYNNTMQKTEVT------EDFACPFCLV-------------K------------------------------------------------------------------------------------CGSYKGLGCHLNSSHDLFH---FEFW--------------------------ISEECQA--VNVSLKTDVWRTELVA-EGV----DPRHQTFSYSSRFKKRRRLGMLGTTAEKI-----------------------------------------------------------------------------------------------------SHVHPHIMDSD-----------------------------------------------S---------------------------------------------------------PEDAQAV---------------SEGDFVQREEDDISAPRAS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDPAQSLHDSNLSPPTVL------QFGKTRKLSAERADPRNRQL-LQK----------------------------------------------------------------------------------------------RQFFHSHRAQPMALEQV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FSDRDSE--------------------------------------D-----------------------------------------------------------------------------------EVD--DDIADFEDR-----------------------------------RMLDDFVDVT--------------------------------------------N-DEKLIMHMWNSFVRKQR----------------------------------------------VL---------------------ADGHIPWACEAFSRLHGKHLVQNPP---------LLW-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GWRFLM------------------------IKLW---------------NHSLL----DARAMNVCGTI------LQGYQNE-----------SS--------------------DPKSI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [637] 'gi|35187161|gb|AAQ84239.1| EMF protein [Oryza sativa]' M---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGLPLTDHDAVNTGCEFDCQRSSDQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MCCEHSVAQFSSDQ--QLNPEENLALYCKPLELYNFIRHRAIEN-----------------------------------PPYLQRCLLYKIRAKQKKRIQITISLPGSNNKELQ-----------------------AQNIFPLYVLFARPTS-NVPIEGHSPIYRFSQARLLTSFNDSGNNDRAEATFVIPDLETLI-ATQAYGLTFILVSRGTKKNK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GRTGQNLCENDCSEKHVDY-SSLRKLAGKCFWGKIPI-------------------------------------------------------------TLLNSSLETCADLILGHIVESPISICMSPGYLEPTFLEHDNCLSF--CSRKADAMVPYQLQVKVSAAEAGAKDILKSPYNSFSYSDVPPSLLLRI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VRLRVGNVLF------------------------------------NYK----NTQMSEVT------EDFTCPFCLV-------------R------------------------------------------------------------------------------------CGNFKGLECHMTSSHDLFH---YEFW--------------------------ISEDYQA--VNVTLKKDNMRTEFVA-AEV----DNSHRIFYYRSRFKKSRT------EILPV-----------------------------------------------------------------------------------------------------ARADAHIMESG-----------------------------------------------S---------------------------------------------------------PEETQAE---------------SEDDVQE------ENENAL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDDSKKLHGSNHSQSEFL------AFGKSRKLSASRADPRNRLL-LQK----------------------------------------------------------------------------------------------RQFIHSHKAQPMTFEEV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSDNDSE--------------------------------------D-----------------------------------------------------------------------------------EVD--DDIADLEDR-----------------------------------RMLDDFVDVT--------------------------------------------K-DEKRIMHMWNSFIRKQS----------------------------------------------IL---------------------ADSHVPWACEAFSRHHGEELLENSA---------LLW-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GWRMFM------------------------IKLW---------------NHSLL----SARTMDTCNRI------LDDIKNE-----------GS--------------------DPKKQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [624] 'gi|50930071|ref|XP 474563.1| OSJNBb0028M18.7 [Oryza sativa (japonica cultivar-group)] >gi|38345644|emb|CAE01874.2| OSJNBb0028M1' M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCEHSVAQFSSDQ--QLNPEENLALYCKPLELYNFIRHRAIEN-----------------------------------PPYLQRCLLYKIRAKQKKRIQITISLPGSNNKELQ-----------------------AQNIFPLYVLFARPTS-NVPIEGHSPIYRFSQARLLTSFNDSGNNDRAEATFVIPDLETLI-ATQAYGLTFILVSRGTKKNK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GRTGQNLCENDCSEKHVDY-SSLRKLAGKCFWGKIPI-------------------------------------------------------------TLLNSSLETCADLILGHIVESPISICMSPGYLEPTFLEHDNCLSF--CSRKADAMVPYQLQVKVSAAEAGAKDILKSPYNSFSYSDVPPSLLLRI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VRLRVGNVLF------------------------------------NYK----NTQMSEVT------EDFTCPFCLV-------------R------------------------------------------------------------------------------------CGNFKGLECHMTSSHDLFH---YEFW--------------------------ISEDYQA--VNVTLKKDNMRTEFVA-AEV----DNSHRIFYYRSRFKKSRT------EILPV-----------------------------------------------------------------------------------------------------ARADAHIMESG-----------------------------------------------S---------------------------------------------------------PEETQAE---------------SEDDVQE------ENENAL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDDSKKLHGSNHSQSEFL------AFGKSRKLSANRADPRNRLL-LQK----------------------------------------------------------------------------------------------RQFIHSHKAQPMTFEEV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSDNDSE--------------------------------------D-----------------------------------------------------------------------------------EVD--DDIADLEDR-----------------------------------RMLDDFVDVT--------------------------------------------K-DEKRIMHMWNSFIRKQS----------------------------------------------IL---------------------ADSHVPWACEAFSRHHGEELLENSA---------LLW-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GWRMFM------------------------IKLW---------------NHSLL----SARTMDTCNRI------LDDIKNE-----------RS--------------------DPKKQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [598] 'gi|66796109|dbj|BAD99130.1| HvEMF2a [Hordeum vulgare]' M---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGLALPNHDAANNGCGFSYTRSTEQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGQKSRAQLSPDD--ELTAKESLALYCKPVELYNLIRQRAIKK-----------------------------------PPSLQRCLRYKIDAKRKKRIQISVSISRSTHTQLP-----------------------AHGIFPLHVLLARSSK-DVPGEGHSPMYRFSRAFVLTSFRESGDSDHTEATFTVPNMKNLS-TSQGSSVNIILVSC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GRGGQNLGE-NCSENHTEY-SSPQKLGGQCFWGKIPI-------------------------------------------------------------DSLGSSLD-CLTLSLGRTVELTSEISMSPGFIEPSLLEHGSCLTF--CSLKADATGSYKLKASIDVQEAGARDMRLSPYNANSYDDVPLSLLPKI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRLRTGNVLF------------------------------------NYKYYKN-LHKSEVT------EGFTCPFCLV-------------P------------------------------------------------------------------------------------CGSFKGLECHLTSSHDLFH---FEFW--------------------------VSKEYQA--VNVSLKSDAKRGELLTIAGN----DPGNRVFFYRSSRFKRYK--ISETPTEKI-----------------------------------------------------------------------------------------------------KDVHPHITVPG---SPGMTMPVDQDIVELRSPRNTVPAPTQMTESRS---------------------------------------------------------------------SEDGQKG---------------SEVDYVPKENGI-NVPEAS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDPHRLLPGRNHSEPTAL------QSDRARKLPVDLDDP-SLEL-LKK----------------------------------------------------------------------------------------------REFFHSQKAQRMEMNVL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NSDHDSE--------------------------------------D-----------------------------------------------------------------------------------ELD--HDIADFEDR-----------------------------------TLLNGFSDVA--------------------------------------------K-EEKRIMHLWNSFKRRQR----------------------------------------------IL---------------------ADGHIPWACEAFTHQHGQELVQNPR---------LRW-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GWRVLM------------------------IKLW---------------NHGLL----NGRTMNICNKH------LESLASQ-----------SA--------------------DPKRS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [660] 'gi|66796113|dbj|BAD99132.1| HvEMF2c [Hordeum vulgare]' M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CRQPSTPDLSPDE--QLAAEETFKLYCKPVELCNVIQKRALDN-----------------------------------PAFLQRCLHYMIQASRKKRIQLTVSLSRGI--ECP-----------------------DQNIFPLYLLLATPTSDNIPLEGHSPIYRFSRACLLTSFSEFAS---TKATFMIPDVKNIA-TSRACNLSVILIRC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASQGQA-GENNCSGDHVEA-SALRKLEGKCFWGKIPI-------------------------------------------------------------NLLGSSLENCVTLNLGHTVELASTVTMSPSFLEPKFLEQDSCLTF--CSHKVDATGSYQLQVGISVQEAGARDMSESPYNSYSYSDVPPSSVSHI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRLRAGNVIF------------------------------------NFKYYNNTMQKTEVT------EDLACAFCLV-------------K------------------------------------------------------------------------------------CGSYKGLGCHLNSTHDLFH---FEFW--------------------------ISEECQA--VNVSLKADAWKMGLMG-KGV----DPRHQTFSYCSRLKVRRRKSV--ATAENI-----------------------------------------------------------------------------------------------------SPVHPHIMDSG-----------------------------------------------S---------------------------------------------------------PEDTQAG---------------SKDEFVQREDDNNSVALDS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------AEHDHSLNGSNLTPPTVL------EFGKTRKLSAERSDPRK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [460] 'gi|8843860|dbj|BAA97386.1| unnamed protein product [Arabidopsis thaliana]' M---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGIPLVSRETS------SCSRSTEQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MCHEDSRLRISEEE--EIAAEESLAAYCKPVELYNIIQRRAIRN-----------------------------------PLFLQRCLHYKIEAKHKRRIQMTVFLSGAIDAGVQ-----------------------TQKLFPLYILLARLVS-PKPVAEYSAVYRFSRACILTGGLGVDGVSQAQANFLLPDMNRLALEAKSGSLAILFISF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAQNSQFGIDSGKIHSGNIG------GHCLWSKIPL-------------------------------------------------------------QSLYASWQKSPNMDLGQRVDTVSLVEMQPCFIK---------------------SSPQQVQVTISAEEVGSTE--KSPYSSFSYNDISSSSLLQI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRLRTGNVVF------------------------------------NYRYYNNKLQKTEGG------LSFPFSFILLVKDTAVVTSLCSDA------------------------------------------------------------------------------------IFSFSPNHVVGPEISLAINPRSPQFR--------------------------VL-EFQA--VNVSLKTETMISKVRT-S------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CLFDL------------------------------------------------------------------------------------------------------------------------------------------------CSLVSLLY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [388] 'gi|4768996|gb|AAD29711.1| hypothetical protein [Oryza sativa]' D---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VNLIVKVFGPR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAVSTLSLSSLQINNFNPEENLALYCKPLELYNFIRHRAIEN-----------------------------------PPYLQRCLLYKIRAKQKKRIQITISLPGSNNKELQ-----------------------AQNIFPLYVLFARPTS-NVPIEGHSPIYRFSQARLLTSFNDSGNNDRAEATFVIPDLETLI-ATQAYGLTFILVSRG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [164] 'gi|7485209|pir||H71435 hypothetical protein - Arabidopsis thaliana' M---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLEFVSSVKELSSKSNMLSCLHGNSYSVLGKETILLPPTHKRISRFHEMQNCRAKSSPEE--VISTDENLLIYCKPVRLYNIFHLRSLGN-----------------------------------PSFLPRCLNYKIGAKRKRKYAFLLECSCHSDMLFI-----------------------LLLIWKLMNYLSLLSRYGHNEWSRS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGMVVF------------------------------------NYKDCNNTLQRTEGN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RGLGYPEATELA---------------GQFEMTSNIPP--AIAHSS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------LDAGAKV---ILTTEAVV------PATKTRKLSAERSEA-------------------------------------------------------------------------------------------------------RRFVHHDTPSS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [240] ; END; BEGIN CODONS; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE=unord PolyTcount=MINSTEPS ; EXSET * UNTITLED = 1-792 797-798 827-861 892-919 936 945-3870; END; BEGIN MacClade; Version 4.0 87; LastModified -1064072328; FileSettings editor '0' '0' '1' '1'; Singles 100; Editor 00011001111111100100010010 '1' '8' Geneva '9' '490' '1' all; EditorPosition '52' '5' '915' '1545'; TreeWindowPosition '46' '6' '981' '1630'; ListWindow Characters closed Geneva '9' '50' '10' '273' '366' 000; ListWindow Taxa closed Geneva '9' '50' '10' '145' '490' 100000000; ListWindow Trees closed Geneva '9' '50' '10' '276' '490' ; ListWindow TypeSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow ExSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow CharSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow TaxSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow CharPartitions closed Geneva '9' 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