#NEXUS 
[MacClade 4.08 registered to Hirai, ERATO]


BEGIN DATA;
	DIMENSIONS  NTAX=36 NCHAR=1817;
	FORMAT DATATYPE=PROTEIN  SYMBOLS = " 1 2 3 4"  MISSING=? GAP=- ;
MATRIX
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'gi|15235577|ref|NP 192451.1| DDB1A; DNA binding / nucleic acid binding [Arabidopsis thaliana] >gi|7267302|emb|CAB81084.1| UV-da'    ------------------------------------------------------------------------------MSS----------------------WNYVVTAHKPTSVTHSCVGNFTSPQELNLIVAKCTRIEIHLLTPQG-------LQPMLDVPIYGRIATLELF-------------------------------------------------------------------------RPHGE----AQDFLFIATERYKFCVLQWDPESS----------ELITRAM--GDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLK--------------------EAFNI-----------------RLEELQVLDIKFLFGCAK-----------------PTIAVLYQD--NKDARHVKTYEVSL---------KDKDFVEGPWSQNSLDN---GADLLIPVP------------------PPL---CGVLIIGEETIVYCSA-SAF-------------KAIP---IRP--------SITKAYGRVDVDGS-----------------------------RYLLGDHAGMIHLLVITH-EKE-----KVTGLKI------ELLGETSIASTISYLDNAVVFVGSSYGDS-----------------QLVKLN-LHPDA--------------------------------KGSYVEVLERYINLGPIVDFCVVDL--ERQ----------GQGQVVTCSGAFKDGSLRVVRNGIGINEQASV-ELQGIKGMWSLKSS-ID----EAFDTFLVVSFISETRILAMNLEDELEETE-IEGFLSQVQTLFCHDAV--YNQLVQVTSNSVRLVSSTTREL-RDEWHAPAGFTVNVATANAS-----------------------------QVLLATGGGHLVYLEI-----GDGKLTEVQHALLEYEVSCLDINPI------GDNPNYSQLAAVGMWTDISVRIFSLP-------ELTLITKEQLGGE----IIPRSVLLCAF------------EGISYLLCALGDGHLLNFQMDTTTG---------------QLKDRKKVSLGTQPITLRTFSSKSA-------------------THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPLGEHARRICHQEQTRTFGICSLG------------------------------------------NQSNSEESEMHFVRLLDDQTFEFM-STYPL---DSFEYGCSILSCSFTE--------DKNVYYCVGTAYVLPEE-------NEPTKGRILVFIV----------EDG------RLQLIAEKETKGAVYSLNAFNG-K--------------LLAAINQKIQLYKWMLRDD-------GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLLYKHEEG--------------------AIEE---RARDYNANWMSAVEILDDDIYLGAENNFNLLTVKKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSEIGQ-----------------------------IPTVIFGTVNGVIGVIASLPQEQYTFLEKLQSSLRKVIK-------------------------GVGGLSHEQW------------RSFNNEKRTA----------EARNFLDGDLIESFLDLSRNKMEDISKSMNV----------QVEELCKRVEELTRLH   [1088]
'gi|15233515|ref|NP 193842.1| DDB1B (DAMAGED DNA BINDING PROTEIN 1 B) [Arabidopsis thaliana] >gi|73620956|sp|O49552|DDB1B ARATH'     ------------------------------------------------------------------------------MSV----------------------WNYAVTAQKPTCVTHSCVGNFTSPQELNLIVAKSTRIEIHLLSPQG-------LQTILDVPLYGRIATMELF-------------------------------------------------------------------------RPHGE----AQDFLFVATERYKFCVLQWDYESS----------ELITRAM--GDVSDRIGRPTDNGQIGIIDPDCRVIGLHLYDGLFKVIPFDNKGQLK--------------------EAFNI-----------------RLEELQVLDIKFLYGCTK-----------------PTIAVLYQD--NKDARHVKTYEVSL---------KDKNFVEGPWSQNNLDN---GADLLIPVP------------------SPL---CGVLIIGEETIVYCSA-NAF-------------KAIP---IRP--------SITKAYGRVDLDGS-----------------------------RYLLGDHAGLIHLLVITH-EKE-----KVTGLKI------ELLGETSIASSISYLDNAVVFVGSSYGDS-----------------QLIKLN-LQPDA--------------------------------KGSYVEILEKYVNLGPIVDFCVVDL--ERQ----------GQGQVVTCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLKSS-ID----EAFDTFLVVSFISETRILAMNIEDELEETE-IEGFLSEVQTLFCHDAV--YNQLVQVTSNSVRLVSSTTREL-RNKWDAPAGFSVNVATANAS-----------------------------QVLLATGGGHLVYLEI-----GDGTLTEVKHVLLEYEVSCLDINPI------GDNPNYSQLAAVGMWTDISVRIFVLP-------DLTLITKEELGGE----IIPRSVLLCAF------------EGISYLLCALGDGHLLNFQLDTSCG---------------KLRDRKKVSLGTRPITLRTFSSKSA-------------------THVFAASDRPAVIYSNNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPIGEHARRICHQEQTRTFAISCLR------------------------------------------NEPSAEESESHFVRLLDAQSFEFL-SSYPL---DAFECGCSILSCSFTD--------DKNVYYCVGTAYVLPEE-------NEPTKGRILVFIV----------EEG------RLQLITEKETKGAVYSLNAFNG-K--------------LLASINQKIQLYKWMLRDD-------GTRELQSECGHHGHILALYVQTRGDFIAVGDLMKSISLLIYKHEEG--------------------AIEE---RARDYNANWMTAVEILNDDIYLGTDNCFNIFTVKKNNEGATDEERARMEVVGEYHIGEFVNRFRHGSLVMK-LPDSDIGQ-----------------------------IPTVIFGTVSGMIGVIASLPQEQYAFLEKLQTSLRKVIK-------------------------GVGGLSHEQW------------RSFNNEKRTA----------EAKGYLDGDLIESFLDLSRGKMEEISKGMDV----------QVEELCKRVEELTRLH   [1088]
'gi|38455768|gb|AAR20885.1| UV damaged DNA binding protein 1 [Lycopersicon esculentum] >gi|42602165|gb|AAS21683.1| UV-damaged DN'    ------------------------------------------------------------------------------MSV----------------------WNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTPQG-------LQPMLDVPIYGRIATLELF-------------------------------------------------------------------------RPHGE----TQDLLFIATERYKFCVLQWDTEAS----------EVITRAM--GDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLK--------------------EAFNI-----------------RLEELQVLDIKFLYGCPK-----------------PTIVVLYQD--NKDARHVKTYEVSL---------KDKDFIEGPWAQNNLDN---GASLLIPVP------------------PPL---CGVLIIGEETIVYCSA-SAF-------------KAIP---IRP--------SITRAYGRVDADGS-----------------------------RYLLGDHNGLLHLLVITH-EKE-----KVTGLKI------ELLGETSIASTISYLDNAFVFIGSSYGDS-----------------QLVKLN-LQPDT--------------------------------KGSYVEVLERYVNLGPIVDFCVVDL--ERQ----------GQGQVVTCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSA-TD----DPYDTFLVVSFISETRVLAMNLEDELEETE-IEGFNSQVQTLFCHDAV--YNQLVQVTSNSVRLVSSTSRDL-KNEWFAPVGYSVNVATANAT-----------------------------QVLLATGGGHLVYLEI-----GDGVLNEVKYAKLDYDISCLDINPI------GENPNYSNIAAVGMWTDISVRIYSLP-------DLNLITKEQLGGE----IIPRSVLMCSF------------EGISYLLCALGDGHLLNFVLSMSTG---------------ELTDRKKVSLGTQPITLRTFSSKDT-------------------THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNVAAFPDSLAIAKEGELTIGTIDEIQKLHIRSIPLGEHARRISHQEQTRTFALCSVK-----------------------------------------YTQSNADDPEMHFVRLLDDQTFEFI-STYPL---DQFEYGCSILSCSFSD--------DSNVYYCIGTAYVMPEE-------NEPTKGRILVFIV----------EDG------KLQLIAEKETKGAVYSLNAFNG-K--------------LLAAINQKIQLYKWASREDG------GSRELQTECGHHGHILALYVQTRGDFIVVGDLMKSISLLIFKHEEG--------------------AIEE---RARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERSRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQ-----------------------------IPTVIFGTVNGVIGVIASLPHDQYLFLEKLQTNLRKVIK-------------------------GVGGLSHEQW------------RSFYNEKKTV----------DAKNFLDGDLIESFLDLSRNRMEEISKAMSV----------PVEELMKRVEELTRLH   [1090]
'gi|49484911|gb|AAT66742.1| UV-damaged DNA binding protein 1 [Lycopersicon cheesmanii] >gi|55976392|sp|Q6E7D1|DDB1 LYCCS DNA dam'    ------------------------------------------------------------------------------MSV----------------------WNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTPQGLQ-CIC-LQPMLDVPIYGRIATLELF-------------------------------------------------------------------------RPHGE----TQDLLFIATERYKFCVLQWDTEAS----------EVITRAM--GDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLK--------------------EAFNI-----------------RLEELQVLDIKFLYGCPK-----------------PTIVVLYQD--NKDARHVKTYEVSL---------KDKDFIEGPWAQNNLDN---GASLLIPVP------------------PPL---CGVLIIGEETIVYCSA-SAF-------------KAIP---IRP--------SITRAYGRVDADGS-----------------------------RYLLGDHNGLLHLLVITH-EKE-----KVTGLKI------ELLGETSIASTISYLDNAFVFIGSSYGDS-----------------QLVKLN-LQPDT--------------------------------KGSYVEVLERYVNLGPIVDFCVVDL--ERQ----------GQGQVVTCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSA-TD----DPYDTFLVVSFISETRVLAMNLEDELEETE-IEGFNSQVQTLFCHDAV--YNQLVQVTSNSVRLVSSTSRDL-KNEWFAPVGYSVNVATANAT-----------------------------QVLLATGGGHLVYLEI-----GDGVLNEVKYAKLDYDISCLDINPI------GENPNYSNIAAVGMWTDISVRIYSLP-------DLNLITKEQLGGE----IIPRSVLMCSF------------EGISYLLCALGDGHLLNFVLSMSTG---------------ELTDRKKVSLGTQPITLRTFSSKDT-------------------THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNVAAFPDSLAIAKEGELTIGTIDEIQKLHIRSIPLGEHARRISHQEQTRTFALCSVK-----------------------------------------YTQSNADDPEMHFVRLLDDQTFEFI-STYPL---DQFEYGCSILSCSFSD--------DSNVYYCIGTAYVMPEE-------NEPTKGRILVFIV----------EDG------KLQLIAEKETKGAVYSLNAFNG-K--------------LLAAINQKIQLYKWASREDG------GSRELQTECGHHGHILALYVQTRGDFIVVGDLMKSISLLIFKHEEG--------------------AIEE---RARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERSRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQ-----------------------------IPTVIFGTVNGVIGVIASLPHDQYLFLEKLQTNLRKVIK-------------------------GVGGLSHEQW------------RSFYNEKKTV----------DAKNFLDGDLIESFLDLSRNRMEEISKAMSV----------PVEELMKRVEELTRLH   [1095]
'gi|7268907|emb|CAB79110.1| UV-damaged DNA-binding protein-like [Arabidopsis thaliana] >gi|2911067|emb|CAA17529.1| UV-damaged DN'    ------------------------------------------------------------------------------MSV----------------------WNYAVTAQKPTCVTHSCVGNFTSPQELNLIVAKSTRIEIHLLSPQG-------LQTILDVPLYGRIATMELF-------------------------------------------------------------------------RPHVSIVFLLNTFLCLRVKHKTFCLLQLKDINSVFFNGIMSPLSLLQGAM--GDVSDRIGRPTDNGQIGIIDPDCRVIGLHLYDGLFKVIPFDNKGQLK--------------------EAFNI-----------------RLEELQVLDIKFLYGCTK-----------------PTIAVLYQD--NKDARHVKTYEVSL---------KDKNFVEGPWSQNNLDN---GADLLIPVP------------------SPL---CGVLIIGEETIVYCSA-NAF-------------KAIP---IRP--------SITKAYGRVDLDGS-----------------------------RYLLGDHAGLIHLLVITH-EKE-----KVTGLKI------ELLGETSIASSISYLDNAVVFVGSSYGDS-----------------QLIKLN-LQPDA--------------------------------KGSYVEILEKYVNLGPIVDFCVVDL--ERQ----------GQGQVVTCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLKSS-ID----EAFDTFLVVSFISETRILAMNIEDELEETE-IEGFLSEVQTLFCHDAV--YNQLVQVTSNSVRLVSSTTREL-RNKWDAPAGFSVNVATANAS-----------------------------QVLLATGGGHLVYLEI-----GDGTLTEVKHVLLEYEVSCLDINPI------GDNPNYSQLAAVGMWTDISVRIFVLP-------DLTLITKEELGGE----IIPRSVLLCAF------------EGISYLLCALGDGHLLNFQLDTSCG---------------KLRDRKKVSLGTRPITLRTFSSKSA-------------------THVFAASDRPAVIYSNNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPIGEHARRICHQEQTRTFAISCLR------------------------------------------NEPSAEESESHFVRLLDAQSFEFL-SSYPL---DAFECGCSILSCSFTD--------DKNVYYCVGTAYVLPEE-------NEPTKGRILVFIV----------EEG------RLQLITEKETKGAVYSLNAFNG-K--------------LLASINQKIQLYKWMLRDD-------GTRELQSECGHHGHILALYVQTRGDFIAVGDLMKSISLLIYKHEEG--------------------AIEE---RARDYNANWMTAVEILNDDIYLGTDNCFNIFTVKKNNEGATDEERARMEVVGEYHIGEFVNRFRHGSLVMK-LPDSDIGQ-----------------------------IPTVIFGTVSGMIGVIASLPQEQYAFLEKLQTSLRKVIK-------------------------GVGGLSHEQW------------RSFNNEKRTA----------EAKGYLDGDLIESFLDLSRGKMEEISKGMDV----------QVEELCKRVEELTRLH   [1102]
'gi|50932983|ref|XP 476019.1| putative DNA damage binding protein 1 [Oryza sativa (japonica cultivar-group)] >gi|48475231|gb|AAT'    ------------------------------------------------------------------------------MSV----------------------WNYVVTAHKPTSVTHSCVGNFTGPNQLNLIVAKCTRIEIHLLTPQG-------LQPMIDVPIYGRIATLELF-------------------------------------------------------------------------RPHNE----TQDFLFIATERYKFCVLQWDGEKS----------ELLTRAM--GDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLK--------------------EAFNI-----------------RLEELQVLDIKFLYGCVK-----------------PTIVVLYQD--NKDARHVKTYEVAL---------KDKDFVEGPWSQNNLDN---GAGLLIPVP------------------APL---GGVIIIGEETIVYCNANSTF-------------RAIP---IKQ--------SIIRAYGRVDPDGS-----------------------------RYLLGDNAGILHLLVLTH-ERE-----RVTGLKI------EYLGETSIASSISYLDNGVVYVGSRFGDS-----------------QLVKLN-LQADP--------------------------------NGSYVEVLERYVNLGPIVDFCVVDL--DRQ----------GQGQVVTCSGAFKDGSLRVVRNGIGINEQASV-ELQGIKGLWSLKSS-FN----DPYDMYLVVSFISETRFLAMNMEDELEETE-IEGFDAQTQTLFCQNAI--NDLLIQVTANSVRLVSCTSREL-VDQWNAPEGFSVNVASANAS-----------------------------QVLLATGGGHLVYLEI-----KDSKLVEVKHIQLEHEISCVDLNPI------GENPQYSSLAAVGMWTDISVRILSLP-------DLELIRKENLGGE----IVPRSVLLCTL------------EGVSYLLCALGDGHLFSFLLNASTG---------------ELTDRKKVSLGTQPISLRTFSSKGT-------------------THVFASSDRPTVIYSSNKKLLYSNVNLKEVNHMCPFNTAAIPDSLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRICHQEQSRTLAFCSFK-----------------------------------------HNQTSIEESETHFVRLLDHQTFEFL-SIYQL---DQYEHGCSIISCSFSD--------DNNVYYCVGTAYVLPEE-------NEPSKGRILVFAV----------EDG------RLQLIVEKETKGAVYSLNAFNG-K--------------LLAAINQKIQLYKWMLRED-------GSHELQSECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEES--------------------AIEE---LARDYNANWMSAVEMLDDEIYIGAENNYNIFTVRKNSDAATDEERGRLEVVGEYHLGEFVNRLRHGSLVMR-LPDSEMGQ-----------------------------IPTVIFGTINGVIGIIASLPHEQYVFLEKLQSTLVKFIK-------------------------GVGNLSHEQW------------RSFHNDKKTS----------EARNFLDGDLIESFLDLSRNKMEEVAKGMGV----------PVEELSKRVEELTRLH   [1090]
'gi|12082087|dbj|BAB20761.1| UV-damaged DNA binding protein [Oryza sativa (japonica cultivar-group)]'                                ------------------------------------------------------------------------------MSV----------------------WNYVVTAHKPTSVTHSCVGNFTGPNQLNLIVAKCTRIEIHLLTPQG-------LQPMIDVPIYGRIATLELF-------------------------------------------------------------------------RPHNE----TQDFLFIATERYKFCVLQWDGEKS----------ELLTRAM--GDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLK--------------------EAFNI-----------------RLEELQVLDIKFLYGCVK-----------------PTIVVLYQD--NKDARHVKTYEVAL---------KDKDFVEGPWSQNNLDN---GAGLLIPVP------------------APL---GGVIIIGEETIVYCNANSTF-------------RAIP---IKQ--------SIIRAYGRVDPDGS-----------------------------RYLLGDNAGILHLLVLTH-ERE-----RVTGLKI------EYLGETSIASSISYLDNGVVYVGSRFGDS-----------------QLVKLN-LQADP--------------------------------NGSYVEVLERYVNLGPIVDFCVVDL--DRQ----------GQGQVVTCSGAFKDGSLRVVRNGIGINEQASV-ELQGIKGLWSLKSS-FN----DPYDMYLVVSFISETRFLAMNMEDELEETE-IEGFDAQTQTLFCQNAI--NDLLIQVTANSVRLVSCTSREL-VDQWNAPEGFSVNVASANAS-----------------------------QVLLATGGGHLVYLEI-----KDSKLVEVKHIQLEHEISCVDLNPI------GENPQYSSLAAVGMWTDISVRILSFP-------DLELIRKENLGGE----IVPRSVLLCTL------------EGVSYLLCALGDGHLFSFLLNASTG---------------ELTDRKKVSLGTQPISLRTFSSKGT-------------------THVFASSDRPTVIYSSNKKLLYSNVNLKEVNHMCPFNTAAIPDSLAIAKEGELSIGTIDDIQKLHIRTIPLDHQTRRICHQEQSRTLAFCSFK-----------------------------------------HNQTSIEESETHFVRLLDHQTFEFL-SIYQL---DQYEHGCSIISCSFSD--------DNNVYYCVGTAYVLPEE-------NEPSKGRILVFAV----------EDG------RLQLIVEKETKGAVYSLNAFNG-K--------------LLAAINQKIQLYKWMLRED-------GSHELQSECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEES--------------------AIEE---LARDYNANWMSAVEMLDDEIYIGAENNYNIFTVRKNSDAATDEERGRLEVVGEYHLGEFGNRFRHGSLVMR-LPDSEMGQ-----------------------------IPTVIFGTINGVIGIIASLPHEQYVFLEKLQSTLVKFIK-------------------------GVGNLSHEQW------------RSFHNDKKTS----------EARNFLDGDLIESFLDLSRNKMEEVAKGMGV----------PVEELSKRVEELTRLH   [1090]
lcl|Smo_DDB1A_3_1_unnamed_protein_product                                    ------------------------------------------------------------------------------MSV----------------------WNYVVTAHKPTNVTHSCVGNFTSPHELNLIIAKCTRIEFHLLTAQG-------LQPLLDVPIYGRIATLELF-------------------------------------------------------------------------RPPGE----TQDVLFVSTERYKFCVLQWDSETT----------ELVTRAM--GDVSDRIGRPTDNGQIGIVDPECRLIGLHLYDGLFKVIPIDNKGQLK--------------------EAFNI-----------------RLEELQVLDIKFLYGCSK-----------------PTIAVLYQD--NKDARHVKTYEIQL---------KEKDFGEGPWSQNNLDN---GAGMLIPVP------------------TPL---GGVIIIGEQTIVYYSG-SAF-------------KAIP---IRP--------SITKAYGKVDADGS-----------------------------RYLLSDHTGSLHLLVITH-ERD-----RVLGLKV------ELLGETSAASSLSYLDNGVVYVGSSYGDS-----------------QLIKLN-AQVDS--------------------------------RNSYVEVLESFVNLGPIVDLCVVDL--ERQ----------GQGQVVTCSGAYKDGSLRIVRNGIGINEQASA-ELQGIKGMWSLRAT-SK----DVFDIFLVVSFISETRILAMNMDDELEETE-IEGFDSEAQTLFCHNAI--HDQIIQVTSTSLRLVDATSRRQ-LTEWRTPSGVAINVATANAS-----------------------------QVLLATGGGNLVYIEI-----GRGSLTEVKHVQLQNEISCLDINPI------GTDPDRSNIAAVGMWTDISVQVFSLP-------NLEVLAKESLGGE----IIPRSVLICAF------------EGVSYLLCALGDGHLFNFLIDTSNG---------------QLSDRKKISLGTQPIMLRTFRSKNA-------------------THVFAASDRPTVIYSSNKKLLYSNVNLKEVNHMCPFNSASFPDSLAIGKEGELTIGTIDDIQKLHIRTVALGEHPRRICHQEQTRTFGLCTARF----------------------------------------YSNPNGEDHESHFVKLLDDQTFEVL-GSYNL---DTFENGCTIITCSFTD--------DPATYYCVGTAYALPEE-------NEPSKGRILIFTV----------EDG------KFQLVTEKETKGAVYNLNAFNG-K--------------LLAGINQKIQLYKWTQRD--------STRELQSECGHHGHILALYVQSRGDFIVVGDLMKSISLLLYKPEEG--------------------AIEE---RARDYNANWMTAVEILDDDIYLGAENSFNLFTVRKNSDAATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDNETSQ-----------------------------IPTVIFGTVNGVIGVVASLQQEQFNFLQRLQHCLAKVIK-------------------------GVGGLSHEQW------------RSFSSERKNA----------DAKNFLDGDLIESFLDLNRAKMDEVSAAMSV----------SVEELCKRVEEMTRLH   [1089]
lcl|Ppa_DDB1A_1_1_unnamed_protein_product                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RSTSRRLEELQVLDIKFLYGCAK-----------------PTIAVLYQD--NKDARHVKTYEVQL---------KEKDFGEGPWLQNNLDN---GAGLLIPVP------------------LPL---GGAIIIGEQTIVYYNG-SVF-------------KAIP---IRP--------SITKAYGRVDSDGS-----------------------------RYLLSDHNGMLYLLVISH-DKE-----RVSALNV------EPLGETSAASTLSYLDNGVVFVGSSYGDS-----------------QLIRLN-HQADA--------------------------------KNSYVEVLESYVNLGPIVDLCVVDL--ERQ----------GQGQVVTCSGAFKDGSLRIVRNGIGINEQASA-ELQGIKGMWSLRAS-SS----DVYDTFLVVSFISETRILAMNTDDELEETE-IDGFDSEAQTLFCYNAV--HDQLVQVTAGSLRLVDAKTRRQ-LTEWKAPAPMTINVATANASQVMPYVMCGDRRCLAGLFFFADLSQNMDEQVLLATGGGNLVYIEI-----GQGTLVEVAHVQLEYEISCLDINPV------GDNPERSNLVAVGMWTDISIRIFALP-------SLTLITKEMLGGE----IIPRSVLFCSF------------DGIAYLLCALGDGHLFNFTLNPATG---------------ELSDRKKISLGTQPIALRTFRSKNT-------------------THVFAASDRPTVIYSSNKKLLYSNVNLKEVNHMCPFNSASFPDSLAIGKEGELTIGTIDEIQKLHIRTVPLGEHPRRIAHQEQSRTFAICSAKY----------------------------------------APGSNGEDMETHYVRLIEDQTFEII-SGFPL---DPYENGCSIITCSFTD--------DSNVYYCVGTAYALPEE-------SEPSKGRILVFSV----------EDG------KIQLVAEKEVKGAVYNLNAFNG-K--------------LLAGINQKIALYKWTLRDD-------GTRELQYESSHHGHILALYVQSRGDFIVVGDLMKSISLLIYKPEEG--------------------AIEE---RARDYNANWMTAVEILDDDTYLGAENSFNLFTVRKNNDAATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSEASQ-----------------------------IPTVIFGTVNGVIGVIASLPQDQFLFLQKLQQALVKVIK-------------------------GVGGLSHEQW------------RSFSNERKTV----------DARNFLDGDLIESFLDLSRNKMEEIATSLEV----------SVEELHKAVEELTRLH   [968]
lcl|Ppa_DDB1A_3_1_unnamed_protein_product                                    ------------------------------------------------------------------------------MHA----------------------NRNS-------------------------------------------------PADSIRAAVYARCPFVWQN-------------------------------------------------------------------------RHTGA----LSPSLNILSSAYFSVVV-----------------MVKCRAM--GDVSDRTGRPTDNGQIGIVDPDCRLIGLHLYDGMFKVIPIDNKGQLK--------------------EAFNISALQAFLYFLTSEGASYRLEELQVLDIKFLYGCAN-----------------PTIAVLYQD--NKDARHVKTYEVNL---------KEKDFGEGPWLQNNLDN---GAGLLIPVP------------------LPL---GGAIIIGEQTIVYYNG-SVF-------------KAIP---IRPIRLVGCSQSITKAYGRVDSDGS-----------------------------RYLLSDHNGMLYLLVISH-DKE-----RVSALNV------EPLGETSAASTLSYLDNGVVFVGSSYGDSQLHFEVHKIMIISDLALQLIRLN-HQADV--------------------------------KGSYVEVLESFVNLGPIVDLCVVDL--ERQ----------GQGQVVTCSGAFKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRAS-SS----DVYDTFLVVSFISETRILAMNTDDELEETE-IDGFDSEAQTLFCHNAV--HDQLVQVTAGSLRLVNAKTRKQ-LTEWKAPAPMTINVATANASQ----------RSLAASLYFADFVNKMDDQVLLATGGGNLVYIEI-----GQGTLTGVAHSQLEYEISCLDINPV------GENPERSNLVAVVIIAVVSIS--GCN-------TILLWKVQVFPVC----CDEFNLRFVVY------------VQLAYLLCAVGDGHLFNFMLNPSTG---------------ELSDRKKISLGTQPIALRTFRSKNT-------------------THVFAASDRPTVIYSSNKKLLYSNVNLKEVNHMCPFNSASFPDSLAIGKEGELTIGTIDDIQKLHIRTVPLGERPCRIAHQEQSRSFAICSAKY----------------------------------------SQGPNNEDIETHYVRLIEDQTFEIT-SGFAL---DLYEIGCSIITCSFTD--------DSNVYYCVGTAYALPEE-------SEPTKGRILVFLV----------EDG------KLQLVAEKEMKGAVYNLNAFNG-K--------------LLAGINQKIALYKWTLR-D-------GTRVLEIESSHHGHILALYVQSRGDFIVVGDLMKSISLLIYKPEEG--------------------AIEE---RARDYNANWMTAVEILDDDTYLGAENSFNLFTVRKNNDAATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSEASL-----------------------------IPTVIFGTVNGVIGVIASLPQDKFLFLQKLQQALVKVIK-------------------------GVGGLSHEQW------------RSFSNERKTV----------DARNFLDGDLIESFLDLSRNKMEEIAAPLEI----------SVEELCKRVEELTRLH   [1099]
'gi|73983859|ref|XP 533275.2| PREDICTED: similar to DNA damage binding protein 1 (Damage-specific DNA binding protein 1) (DDB p1'    -------------------------------------------------------------------------------MS----------------------YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-------LRPVKEVGMYGKIAVMELF-------------------------------------------------------------------------RPKGE----SKDLLFILTAKYNACILEYKQSGESI--------DIITRAH--GNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKEL--------------------KAFNI-----------------RLEELHVIDVKFLYGCQA-----------------PTICFVYQD--P-QGRHVKTYEVSL---------REKEFNKGPWKQENVEA---EASMVIAVP------------------EPF---GGAIIIGQESITYHNG-DKY-------------LAIAPPIIKQ--------STIVCHNRVDPNGS-----------------------------RYLLGDMEGRLFMLLLEK-EEQMDGTVTLKDLRV------ELLGETSIAECLTYLDNGVVFVGSRLGDS-----------------QLVKLN-VDSNE--------------------------------QGSYVVAMETFTNLGPIVDMCVVDL--ERQ----------GQGQLVTCSGAFKEGSLRIIRNGIGIHEHASI-DLPGIKGLWPLRSD-PN----RETDDTLVLSFVGQTRVLMLN-GEEVEETE-LMGFVDDQQTFFCGNVA--HQQLIQITSASVRLVSQEPKAL-VSEWKEPQGKNISVASCNSS-----------------------------QVVVAV-GRALYYLQI-----HPQELRQISHTEMEHEVACLDITPL------GDSNGLSPLCAIGLWTDISARILKLP-------SFELLHKEMLGGE----IIPRSILMTTF------------ESSHYLLCALGDGALFYFGLNIETG---------------LLSDRKKVTLGTQPTVLRTFRSLST-------------------TNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSK---LFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVL-HAHQF---LQNEYALSLVSCKLGK--------DPNTYFIVGTAMVYPEE-------AEPKQGRIVVFQY----------SDG------KLQTVAEKEVKGAVYSMVEFNG-K--------------LLASINSTVRLYEWT-----------TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEG--------------------NFEE---IARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPT-----------------------------QGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIK-------------------------SVGKIEHSFW------------RSFHTERKTE----------PATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH   [1140]
'gi|38303806|gb|AAH61946.1| MGC68476 protein [Xenopus laevis]'                                    -------------------------------------------------------------------------------MS----------------------YNYVVTAQKPTAVNACVTGHFTSEDDLNLLIAKNTRLEIYVVTPEG-------LRPVKEVGMYGKIAVMELF-------------------------------------------------------------------------RPKGE----SKDLLFILTAKYNACILEYKQSGDSI--------DIITRAH--GNVQDRIGRPSETGIIGIIDPDCRMIGLRLYDGLFKVIPLERDNKEL--------------------KAFNI-----------------RLEELHVIDVKFLYSCQA-----------------PTICFVYQD--P-QGRHVKTYEVSL---------REKEFSKGPWKQENVEA---EASMVIAVP------------------EPF---GGAIIIGQESITYHNG-DKY-------------LAIAPPIIKQ--------STIVCHNRVDVNGS-----------------------------RYLLGDMEGRLFMLLLEK-EEQMDGSVTLKDLRV------ELLGETSIAECLTYLDNGVVFVGSRLGDS-----------------QLVKLT-TESNE--------------------------------QGSYVVVMETFTNLGPIVDMCVVDL--ERQ----------GQGQLVTCSGAFKEGSLRIIRNGIGIHEHASI-DLPGIKGLWPLRVA-AD----RDTDDTLVLSFVGQTRVLTLT-GEEVEETD-LAGFVDDQQTFFCGNVA--HQQLIQITSASVRLVSQNPQNL-VSEWKEPQGRKVSVCSCNSR-----------------------------QVLLAV-GRVLYYLEI-----HPGELRQTSCTEMEHEVACLDVTPL------GGNDTLSSLCAIGLWTDISARILSLP-------GFQLLHKEMLGGE----IIPRSILMTSF------------ESSHYLLCALGDGALFYFSLNTDTG---------------LLSDRKKVTLGTQPTVLRTFRSLST-------------------TNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLFESPRKICYQEVSQCFGVLSSRIEVQDASGGSSPLRPSASTQALSSSVSCSK---LFSGSTSPHETSFGEEVEVHNLLIIDQHTFEVL-HTHQF---LQNEYTLSLVSCKLGK--------DPTTYFVVGTAMVYPDE-------AEPKQGRIVVFQY----------NDG------KLQTVAEKEVKGAVYSMVEFNG-K--------------LLASINSTVRLYEWT-----------AEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEG--------------------NFEE---IARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSPPT-----------------------------QGSVLFGTVNGMIGLVTSLSESWYNLLLDVQNRLNKVIK-------------------------SVGKIEHSFW------------RSFHTERKTE----------PATGFIDGDLIESFLDISRPKMQEVIANLQIDDGSGMKRETTVDDLIKVVEELTRIH   [1140]
'gi|74196166|dbj|BAE32993.1| unnamed protein product [Mus musculus] >gi|74182145|dbj|BAE34102.1| unnamed protein product [Mus mu'    -------------------------------------------------------------------------------MS----------------------YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-------LRPVKEVGMYGKIAVMELF-------------------------------------------------------------------------RPKGE----SKDLLFILTAKYNACILEYKQSGESI--------DIITRAH--GNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKEL--------------------KAFNI-----------------RLEELHVIDVKFLYGCQA-----------------PTICFVYQD--P-QGRHVKTYEVSL---------REKEFNKGPWKQENVEA---EASMVIAVP------------------EPF---GGAIIIGQESITYHNG-DKY-------------LAIAPPIIKQ--------STIVCHNRVDPNGS-----------------------------RYLLGDMEGRLFMLLLEK-EEQMDGTVTLKDLRV------ELLGETSIAECLTYLDNGVVFVGSRLGDS-----------------QLVKLN-VDSNE--------------------------------QGSYVVAMETFTNLGPIVDMCVVDL--ERQ----------GQGQLVTCSGAFKEGSLRIIRNGIGIHEHASI-DLPGIKGLWPLRSD-PG----RETDDTLVLSFVGQTRVLMLN-GEEVEETE-LMGFVDDQQTFFCGNVA--HQQLIQITSASVRLVSQEPKAL-VSEWKEPQGKNISVASCNSS-----------------------------QVVVAV-GRALYYLQI-----HPQELRQISHTEMEHEVACLDITPL------GDSNGLSPLCAIGLWTDISARILKLP-------SFELLHKEMLGGE----IIPRSILMTTF------------ESSHYLLCALGDGALFYFGLNIETG---------------LLSDRKKVTLGTQPTVLRTFRSLST-------------------TNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDSSGGTTALRPSASTQALSSSVSSSK---LFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVL-HAHQF---LQNEYALSLVSCKLGK--------DPNTYFIVGTAMVYPEE-------AEPKQGRIVVFQY----------SDG------KLQTVAEKEVKGAVYSMVEFNG-K--------------LLASINSTVRLYEWT-----------TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEG--------------------NFEE---IARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGEASTPT-----------------------------QGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIK-------------------------SVGKIEHSFW------------RSFHTERKTE----------PATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH   [1140]
'gi|74215029|dbj|BAE33503.1| unnamed protein product [Mus musculus]'                                    -------------------------------------------------------------------------------MS----------------------YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-------LRPVKEVGMYGKIAVMELF-------------------------------------------------------------------------RPKGE----SKDLLFILTAKYNACILEYKQSGESI--------DIITRAH--GNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKEL--------------------KAFNI-----------------RLEELHVIDVKFLYGCQA-----------------PTICFVYQD--P-QGRHVKTYEVSL---------REKEFNKGPWKQENVEA---EASMVIAVP------------------EPF---GGAIIIGQESITYHNG-DKY-------------LAIAPPIIKQ--------STIVCHNRVDPNGS-----------------------------RYLLGDMEGRLFMLLLEK-EEQMDGTVTLKDLRV------ELLGETSIAECLTYLDNGVVFVGSRLGDS-----------------QLVKLN-VDSNE--------------------------------QGSYVVAMETFTNLGPIVDMCVVDL--ERQ----------GQGQLVTCSGAFKEGSLRIIRNGIGIHEHASI-DLPGIKGLWPLRSD-PG----RETDDTLVLSFVGQTRVLMLN-GEEVEETE-LMGFVDDQQTFFCGNVA--HQQLIQITSASVRLVSQEPKAL-VSEWKEPQGKNISVASCNSS-----------------------------QVVVAV-GRALYYLQI-----HPQELRQISHTEMEHEVACLDITPL------GDSNGLSPLCAIGLWTDISARILKLP-------SFELLHKEMLGGE----IIPRSILMTTF------------ESSHYLLCALGDGALFYFGLNIETG---------------LLSDRKKVTLGTQPTVLRTFRSLST-------------------TNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDSSGGTTALRPSASTQALSSSVSSSK---LFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVL-HAHQF---LQNEYALSLVSCKLGK--------DPNTYFIVGTAMVYPEE-------AEPKQGRIVVFQY----------SDG------KLQTVAEKEVKGAVYSMVEFNG-K--------------LLASINSTVRLYEWT-----------TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEG--------------------NFEE---IARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQRDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGEASTPT-----------------------------QGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIK-------------------------SVGKIEHSFW------------RSFHTERKTE----------PATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH   [1140]
'gi|30354567|gb|AAH51764.1| Damage-specific DNA binding protein 1 [Homo sapiens] >gi|61354161|gb|AAX44048.1| damage-specific DNA'    -------------------------------------------------------------------------------MS----------------------YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-------LRPVKEVGMYGKIAVMELF-------------------------------------------------------------------------RPKGE----SKDLLFILTAKYNACILEYKQSGESI--------DIITRAH--GNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKEL--------------------KAFNI-----------------RLEELHVIDVKFLYGCQA-----------------PTICFVYQD--P-QGRHVKTYEVSL---------REKEFNKGPWKQENVEA---EASMVIAVP------------------EPF---GGAIIIGQESITYHNG-DKY-------------LAIAPPIIKQ--------STIVCHNRVDPNGS-----------------------------RYLLGDMEGRLFMLLLEK-EEQMDGTVTLKDLRV------ELLGETSIAECLTYLDNGVVFVGSRLGDS-----------------QLVKLN-VDSNE--------------------------------QGSYVVAMETFTNLGPIVDMCVVDL--ERQ----------GQGQLVTCSGAFKEGSLRIIRNGIGIHEHASI-DLPGIKGLWPLRSD-PN----RETDDTLVLSFVGQTRVLMLN-GEEVEETE-LMGFVDDQQTFFCGNVA--HQQLIQITSASVRLVSQEPKAL-VSEWKEPQAKNISVASCNSS-----------------------------QVVVAV-GRALYYLQI-----HPQELRQISHTEMEHEVACLDITPL------GDSNGLSPLCAIGLWTDISARILKLP-------SFELLHKEMLGGE----IIPRSILMTTF------------ESSHYLLCALGDGALFYFGLNIETG---------------LLSDRKKVTLGTQPTVLRTFRSLST-------------------TNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSK---LFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVL-HAHQF---LQNEYALSLVSCKLGK--------DPNTYFIVGTAMVYPEE-------AEPKQGRIVVFQY----------SDG------KLQTVAEKEVKGAVYSMVEFNG-K--------------LLASINSTVRLYEWT-----------TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEG--------------------NFEE---IARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPT-----------------------------QGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIK-------------------------SVGKIEHSFW------------RSFHTERKTE----------PATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH   [1140]
'gi|74138855|dbj|BAE27231.1| unnamed protein product [Mus musculus]'                                    -------------------------------------------------------------------------------MS----------------------YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-------LRPVKEVGMYGKIAVMELF-------------------------------------------------------------------------RPKGE----SKDLLFILTAKYNACILEYKQSGESI--------DIITRAH--GNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKEL--------------------KAFNI-----------------RLEELHVIDVKFLYGCQA-----------------PTICFVYQD--P-QGRHVKTYEVSL---------REKEFNKGPWKQENVEA---EASMVIAVP------------------EPF---GGAIIIGQESITYHNG-DKY-------------LAIAPPIIKQ--------STIVCHNRVDPNGS-----------------------------RYLLGDMEGRLFMLLLEK-EEQMDGTVTLKDLRV------ELLGETSIAECLTYLDNGVVFVGSRLGDS-----------------QLVKLN-VDSNE--------------------------------QGSYVVAMETFTNLGPIVDMCVVDL--ERQ----------GQGQLVTCSGAFKEGSLRIIRNGIGIHEHASI-DLPGIKGLWPLRSD-PG----RETDDTLVLSFVGQTRVLMLN-GEEVEETE-LMGFVDDQQTFFCGNVA--HQQLIQITSASVRLVSQEPKAL-VSEWKEPQGKNISVASCNSS-----------------------------QVVVAV-GRALYYLQI-----HPQELRQISHTEMEHEVACLDITPL------GDSNGLSPLCAIGLWTDISARILKLP-------SFELLHKEMLGGE----IIPRSILMTTF------------ESSHYLLCALGDGALFYFGLNIETG---------------LLSDRKKVTLGTQPTVLRTFRSLST-------------------TNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPNSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDSSGGTTALRPSASTQALSSSVSSSK---LFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVL-HAHQF---LQNEYALSLVSCKLGK--------DPNTYFIVGTAMVYPEE-------AEPKQGRIVVFQY----------SDG------KLQTVAEKEVKGAVYSMVEFNG-K--------------LLASINSTVRLYEWT-----------TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEG--------------------NFEE---IARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGEASTPT-----------------------------QGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIK-------------------------SVGKIEHSFW------------RSFHTERKTE----------PATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH   [1140]
'gi|55732122|emb|CAH92767.1| hypothetical protein [Pongo pygmaeus]'                                    -------------------------------------------------------------------------------MS----------------------YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-------LRPVKEVGMYGKIAVMELF-------------------------------------------------------------------------RPKGE----SKDLLFILTAKYNVCILEYKQSGESI--------DIITRAH--GNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKEL--------------------KAFNI-----------------RLEELHVIDVKFLYGCQA-----------------PTICFVYQD--P-QGRHVKTYEVSL---------REKEFNKGPWKQENVEA---EASMVIAVP------------------EPF---GGAIIIGQESITYHNG-DKY-------------LAIAPPIIKQ--------STIVCHNRVDPNGS-----------------------------RYLLGDMEGRLFMLLLEK-EEQMDGTVTLKDLRV------ELLGETSIAECLTYLDNGVVFVGSRLGDS-----------------QLVKLN-VDSNE--------------------------------QGSYVVAMETFTNLGPIVDMCVVDL--ERQ----------GQGQLVTCSGAFKEGSLRIIRNGIGIHEHASI-DLPGIKGLWPLRSD-PN----RETDDTLVLSFVGQTRVLMLN-GEEVEETE-LMGFVDDQQTFFCGNVA--HQQLIQITSASVRLVSQEPKAL-VSEWKEPQAKNISVASCNSS-----------------------------QVVVAV-GRALYYLQI-----HPQELRQISHTEMEHEVACLDITPL------GDSNGLSPLCAIGLWTDISARILKLP-------SFELLHKEMLGGE----IIPRSILMTTF------------ESSHYLLCALGDGALFYFGLNIETG---------------LLSDRKKVTLGTQPTVLRTFRSLST-------------------TNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSK---LFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVL-HAHQF---LQNEYALSLVSCKLGK--------DPNTYFIVGTAMVYPEE-------AEPKQGRIVVFQY----------SDG------KLQTVAEKEVKGAVYPMVEFNG-K--------------LLASINSTVRLYEWT-----------TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEG--------------------NFEE---IARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPT-----------------------------QGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIK-------------------------SVGKIEHSFW------------RSFHTERKTE----------PATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH   [1140]
'gi|418316|sp|P33194|DDB1 CERAE DNA damage-binding protein 1 (Damage-specific DNA-binding protein 1) (DDB p127 subunit) (DDBa) ('    -------------------------------------------------------------------------------MS----------------------YNYVVTAQKPTAVNGCVTAHFTSAEDLNLLIAKNTRLEIYVVTAEG-------LRPVKEVGMYGKIAVMELF-------------------------------------------------------------------------RPKGE----SKDLLFILTAKYNACILEYKQSGESI--------DIITRAH--GNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKEL--------------------KAFNI-----------------RLEELHVIDVKFLYGCQA-----------------PTICFVYQD--P-QGRHVKTYEVSL---------REKEFNKGPWKQENVEA---EASMVIAVP------------------EPF---GGAIIIGQESITYHNG-DKY-------------LAIAPPIIKQ--------STIVCHNRVDPNGS-----------------------------RYLLGDMEGRLFMLLLEK-EEQMDGTVTLKDLRV------ELLGETSIAECLTYLDNGVVFVGSRLGDS-----------------QLVKLN-VDSNE--------------------------------QGSYVVAMETFTNLGPIVDMCVVDL--ERQ----------GQGQLVTCSGAFKEGSLRIIRNGIGIHEHASI-DLPGIKGLWPLRSD-PN----RETDDTLVLSFVGQTRVLMLN-GEEVEETE-LMGFVDDQQTFFCGNVA--HQQLIQITSASVRLVSQEPKAL-VSEWKEPQAKNISVASCNSS-----------------------------QVVVAV-GRALYYLQI-----HPQELRQISHTEMEHEVACLDITPL------GDSNGLSPLCAIGLWTDISARILKLP-------SFELLHKEMLGGE----IIPRSILMTTF------------ESSHYLLCALGDGALFYFGLNIETG---------------LLSDRKKVTLGTQPTVLRTFRSLST-------------------TNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSK---LFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVL-HAHQF---LQNEYALSLVSCKLGK--------DPNTYFIVGTAMVYPEE-------AEPKQGRIVVFQY----------SDG------KLQTVAEKEVKGAVYSMVEFNG-K--------------LLASINSTVRLYEWT-----------TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEG--------------------NFEE---IARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPT-----------------------------QGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIK-------------------------SVGKIEHSFW------------RSFHTERKTE----------PATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH   [1140]
'gi|5353754|gb|AAD42230.1| damage-specific DNA binding protein 1 [Mus musculus]'                                    -------------------------------------------------------------------------------MS----------------------YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLKIYVVTAEG-------LRPVKEVGMYGKIAVMELF-------------------------------------------------------------------------RPKGE----SKDLLFILTAKYNACILEYKQSGESI--------DIITRAH--GNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKEL--------------------KAFNI-----------------RLEELHVIDVKFLYGCQA-----------------PTICFVYQD--P-QGRHVKTYEVSL---------REKEFNKGPWKQENVEA---EASMVIAVP------------------EPF---GGAIIIGQESITYHNG-DKY-------------LAIAPPIIKQ--------STIVCHNRVDPNGS-----------------------------RYLLGDMEGRLFMLLLEK-EEQMDGTVTPKDLRV------ELLGETSIAECLTYLDNGVVFVGSRLGDS-----------------QLVKLN-VDSNE--------------------------------QGSYVVAMETFTNLGPIVDMCVVDL--ERQ----------GQGQLVTCSGAFKEGSLRIIRNGIGIHEHASI-DLPGIKGLWPLRSD-PG----RETDDTLVLSFVGQTRVLMLN-GEEVEETE-LMGFVDDQQTFFCGNVA--HQQLIQITSASVRLVSQEPKAL-VSEWKEPQGKNISVASCNSS-----------------------------QVVVAV-GRALYYLQI-----HPQELRQISHTEMEHEVACLDITPL------GDSNGLSPLCAIGLWTDISARILKLP-------SFELLHKEMLGGE----IIPRSILMTTF------------ESSRYLLCALGDGALFYFGLNIETG---------------LLSDRKKVTLGTQPTVLRTFRSLST-------------------TNVFACSDRPTVIYS?NHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDSSGGTTALRPSASTQALSSSVSSSK---LFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVL-HAHQF---LQNEYALSLVSCKLGK--------DPNTYFIVGTAMVYPEE-------AEPKQGRIVVFQY----------SDG------KLQTVAEKEVKGAVYSMVEFNG-K--------------LLASINSTVRLYEWT-----------TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEG--------------------NFEE---IARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGEASTPT-----------------------------QGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIK-------------------------SVGKIEHSFW------------RSFHTERKTE----------PATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH   [1140]
'gi|53130071|emb|CAG31438.1| hypothetical protein [Gallus gallus] >gi|45383688|ref|NP 989547.1| damage-specific DNA binding prot'    -------------------------------------------------------------------------------MS----------------------YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-------LRPVKEVGMYGKTAVMELF-------------------------------------------------------------------------RPKGE----SKDLLFILTAKYNACILEYKQNGDNI--------DIITRAH--GNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRENKEL--------------------KAFNI-----------------RLEELQVIDVKFLYGCQA-----------------PTICFVYQD--P-QGRHVKTYEVSL---------REKEFNKGPWKQENVEA---EASMVIAVP------------------EPF---GGAIIIGQESITYHNG-DKY-------------LAIAPPIIKQ--------STIVCHNRVDPNGS-----------------------------RYLLGDMEGRLFMLLLEK-EEQMDGTVTLKDLRV------ELLGETSIAECLTYLDNGVVFVGSRLGDS-----------------QLVKLN-VDSNE--------------------------------QGSYVVAMETFTNLGPIVDMCVVDL--ERQ----------GQGQLVTCSGAFKEGSLRIIRNGIGIHEHASI-DLPGIKGLWPLRSD-SH----REMDNMLVLSFVGQTRVLMLN-GEEVEETE-LTGFVDDQQTFFCGNVA--HQQLIQITSASVRLVSQEPKAL-VSEWKEPNGKNISVASCNSN-----------------------------QVVVAV-GRALYYLEI-----RPQELRQINCTEMEHEVACLDITPL------GDTNGMSPLCAIGLWTDISARILKLP-------SFELLHKEMLGGE----IIPRSILMTTF------------ESSHYLLCALGDGALFYFGLSLETG---------------LLSDRKKVTLGTQPTVLRTFRSLST-------------------TNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSTSK---LFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVL-HAHQF---LQNEYALSLVSCKLGK--------DPNTYFIVGTAMVYPEE-------AEPKQGRIVVFHY----------SDG------KLQSLAEKEVKGAVYSMVEFNG-K--------------LLASINSTVRLYEWT-----------AEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEG--------------------NFEE---IARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLSHLGEFVNVFCHGSLVMQNLGETSTPT-----------------------------QGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIK-------------------------SVGKIEHSFW------------RSFHTERKTE----------PATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH   [1140]
'gi|13435359|ref|NP 001914.2| damage-specific DNA binding protein 1 [Homo sapiens] >gi|90108801|pdb|2B5M|A Chain A, Crystal Stru'    -------------------------------------------------------------------------------MS----------------------YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-------LRPVKEVGMYGKIAVMELF-------------------------------------------------------------------------RPKGE----SKDLLFILTAKYNACILEYKQSGESI--------DIITRAH--GNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKEL--------------------KAFNI-----------------RLEELHVIDVKFLYGCQA-----------------PTICFVYQD--P-QGRHVKTYEVSL---------REKEFNKGPWKQENVEA---EASMVIAVP------------------EPF---GGAIIIGQESITYHNG-DKY-------------LAIAPPIIKQ--------STIVCHNRVDPNGS-----------------------------RYLLGDMEGRLFMLLLEK-EEQMDGTVTLKDLRV------ELLGETSIAECLTYLDNGVVFVGSRLGDS-----------------QLVKLN-VDSNE--------------------------------QGSYVVAMETFTNLGPIVDMCVVDL--ERQ----------GQGQLVTCSGAFKEGSLRIIRNGIGIHEHASI-DLPGIKGLWPLRSD-PN----RETYDTLVLSFVGQTRVLMLN-GEEVEETE-LMGFVDDQQTFFCGNVA--HQQLIQITSASVRLVSQEPKAL-VSEWKEPQAKNISVASCNSS-----------------------------QVVVAV-GRALYYLQI-----HPQELRQISHTEMEHEVACLDITPL------GDSNGLSPLCAIGLWTDISARILKLP-------SFELLHKEMLGGE----IIPRSILMTTF------------ESSHYLLCALGDGALFYFGLNIETG---------------LLSDRKKVTLGTQPTVLRTFRSLST-------------------TNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSK---LFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVL-HAHQF---LQNEYALSLVSCKLGK--------DPNTYFIVGTAMVYPEE-------AEPKQGRIVVFQY----------SDG------KLQTVAEKEVKGAVYSMVEFNG-K--------------LLASINSTVRLYEWT-----------TEKDVRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEG--------------------NFEE---IARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPT-----------------------------QGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIK-------------------------SVGKIEHSFW------------RSFHTERKTE----------PATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH   [1140]
'gi|2632123|emb|CAA05770.1| Xeroderma Pigmentosum Group E Complementing protein [Homo sapiens]'                                    -------------------------------------------------------------------------------MS----------------------YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-------LRPVKEVGMYGKIAVMELF-------------------------------------------------------------------------RPKGE----SKDLLFILTAKYNACILEYKQSGESI--------DIITRAH--GNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKEL--------------------KAFNI-----------------RLEELHVIDVKFLYGCQA-----------------PTICFVYQD--P-QGRHVKTYEVSL---------REKEFNKGPWKQENVEA---EASMVIAVP------------------EPF---GGAIIIGQESITYHNG-DKY-------------LAIAPPIIKQ--------STIVCHNRVDPNGS-----------------------------RYLLGDMEGRLFMLLLEK-EEQMDGTVTLKDLRV------ELLGETSIAECLTYLDNGVVFVGSRLGDS-----------------QLVKLN-VDSNE--------------------------------QGSYVVAMETFTNLGPIVDMCVVDL--ERQ----------GQGQLVTCSGAFKEGSLRIIRNGIGIHEHASI-DLPGIKGLWPLRSD-PN----RETDDTLVLSFVGQTRVLMLN-GEEVEETE-LMGFVDDQQTFFCGNVA--HQQLIQITSASVRLVSQEPKAL-VSEWKEPQAKNISVASCNSS-----------------------------QVVVAV-GRALYYLQI-----HPQELRQISHTGMEHEVACLDITPL------GDSNGLSPLCAIGLWTDISARILKLP-------SFELLHKEMLGGE----IIPRSILMTTF------------ESSHYLLCALGDGALFYFGLNIETG---------------LLSDRKKVTLGTQPTVLRTFRSLST-------------------TNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSK---LFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVL-HAHQF---LQNEYALSLVSCKLGK--------DPNTYFIVGTAMVYPEE-------AEPKQGRIVVFQY----------SDG------KLQTVAEKEVKGDVYSMVEFNG-K--------------LLASINSTVRLYEWT-----------TEKDVRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEG--------------------NFEE---IARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPT-----------------------------QGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIK-------------------------SVGKIEHSFW------------RSFHTERKTE----------PATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH   [1140]
'gi|74178494|dbj|BAE32502.1| unnamed protein product [Mus musculus]'                                    -------------------------------------------------------------------------------MS----------------------YNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEG-------LRPVKEVGMYGKIAVMELF-------------------------------------------------------------------------RPKGE----SKDLLFILTAKYNACILEYKQSGESI--------DIITRAH--GNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKEL--------------------KAFNI-----------------RLEELHVIDVKFLYGCQA-----------------PTICFVYQD--P-QGRHVKTYEVSL---------REKEFNKGPWKQENVEA---EASMVIAVP------------------EPF---GGAIIIGQESITYHNG-DKY-------------LAIAPPIIKQ--------STIVCHNRVDPNGS-----------------------------RYLLGDMEGRLFMLLLEK-EEQMDGTVTLKDLRV------ELLGETSIAECLTYLDNGVVFVGSRLGDS-----------------QLVKLN-VDSNE--------------------------------QGSYVVAMETFTNLGPIVDMCVVDL--ERQ----------GQGQLVTCSGAFKEGSLRIIRNGIGIHEHASI-DLPGIKGLWPLRSD-PG----RETDDTLVLSFVGQTRVLMLN-GEEVEETE-LMGFVDDQQTFFCGNVA--HQQLIQITSASVRLVSQEPKAL-VSEWKEPQGKNISVASCNSS-----------------------------QVVVAV-GRALYYLQI-----HPQELRQISHTEMEHEVACLDITPL------GDSNGLSPLCAIGLWTDISARILKLP-------SFELLHKEMLGGE----IIPRSILMTTF------------ESSHCLLCALGDGALFYFGLNIETG---------------LLSDRKKVTLGTQPTVLRTFRSLST-------------------TNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTDPLYESPRKICYQEVSQCFGVLSSRIEVQDSSGGTTALRPSASTQALSSSVSSSK---LFSSSTAPHETSFGEEVEVHNLLIIGQHTFEVL-HAHQF---LQNEYALSLVSCKLGK--------DPNTYFIVGTAMVYPEE-------AEPKLGRIVVFQY----------SDG------KLQTVAEKEVKGAVYSMVEFNG-K--------------LLASINSTVRLYEWT-----------TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEG--------------------NFEE---IARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGEASTPT-----------------------------QGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIK-------------------------SVGKIEHSFW------------RSFHTERKTE----------PATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH   [1140]
'gi|25282451|ref|NP 741992.1| damage-specific DNA binding protein 1 [Rattus norvegicus] >gi|9843869|emb|CAB89874.2| damage-speci'    -------------------------------------------------------------------------------MS----------------------YNYVVTAQKPTAVNGCVTGHFTSAEDINLLIAKNTRLEIYVVTAEG-------LRPVKEVGMYGKIAVMELF-------------------------------------------------------------------------RPKGE----SKDLLFILTAKYNACILEYKQSGESI--------DIITRAH--GNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKEL--------------------KAFNI-----------------RLEELHVIDVKFLYGCQA-----------------PTICFVYQD--P-QGRHVKTYEVSL---------REKEFNKGPWKQENVEA---EASMVIAVP------------------EPF---GGAIIIGQESITYHNG-DKY-------------LAIAPPIIKQ--------STIVCHNRVDPNGS-----------------------------RYLLGDMEGRLFMLLLEK-EEQMDGTVTLKDLRV------ELLGETSIAECLTYLDNGVVFVGSRLGDS-----------------QPVKLN-VDSNE--------------------------------QGSYVVAMETFTNLGPIVDMCVVDL--ERQ----------GQGQLVTCSGAFKEGSLRIIRNGIGIHEHASI-DLPGIKGLWPLRSD-PN----RETDDTLVLSFVGQTRVLMLN-GEEVEETE-LMGFVDDQQTFFCGNVA--HQQLIQITSASVRLVSQEPKAL-VSEWKEPRAKNISVASCNSS-----------------------------QVVVAV-GRALYYLQI-----HPQELRQISHTEMEHEVACLDVTPL------GDSNGLSPLCAIGLWTDISARILKLP-------SFELLHKEMLGGE----IIPRSILMTTF------------ESSHYLLCALGDGALFYFGLNIETG---------------LLSDRKKVTLGTQPTVLRTFRSLST-------------------TNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANTSTLTIGTMNEIQKLHIRTVPIYESPRKICYQEVSQCFGVLSTRIEVQDTSGGTTALRPSASTQALSSSVSSSK---LFSSSAAPHETSFGEEVEVHNLLIIDQHTFEVL-HAHQF---LQNEYALSLVSCKLGK--------DPNTYFIVGTAMVYPEE-------AEPKQGRIVVFQY----------SGG------KLQTVAEKEVKGAVYSMVEFNG-K--------------LLASINSTVRLYEWT-----------TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEG--------------------NFEE---IARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPT-----------------------------QGSVLLGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIK-------------------------SVGKIEHSFW------------RSFHTERKTE----------PATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH   [1140]
'gi|55636147|ref|XP 508472.1| PREDICTED: damage-specific DNA binding protein 1 [Pan troglodytes]'                                    MDNPVLPGSEYSGGSSSTCRSGSEDTDAPPPPAHGRIRHIRRRRDFPETPKRALSSGSCGRWRKAARRRLRGRGLLRLAASGFGSPPRGQGRARVPTGRSKPGHVVQLGGNGPEAHRRERLRHFTSAEDLNLLIAKNTRLEIYVVTAEG-------LRPVKEVGMYGKIAVMELF-------------------------------------------------------------------------RPKGE----SKDLLFILTAKYNACILEYKQSGESI--------DIITRAH--GNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKEL--------------------KAFNI-----------------RLEELHVIDVKFLYGCQA-----------------PTICFVYQD--P-QGRHVKTYEVSL---------REKEFNKGPWKQENVEA---EASMVIAVP------------------EPF---GGAIIIGQESITYHNG-DKY-------------LAIAPPIIKQ--------STIVCHNRVDPNGS-----------------------------RYLLGDMEGRLFMLLLEK-EEQMDGTVTLKDLRV------ELLGETSIAECLTYLDNGVVFVGSRLGDS-----------------QLVKLN-VDSNE--------------------------------QGSYVVAMETFTNLGPIVDMCVVDL--ERQ----------GQGQLVTCSGAFKEGSLRIIRNGIGIHEHASI-DLPGIKGLWPLRSD-PN----RETDDTLVLSFVGQTRVLMLN-GEEVEETE-LMGFVDDQQTFFCGNVA--HQQLIQITSASVRLVSQEPKAL-VSEWKEPQAKNISVASCNSS-----------------------------QVVVAV-GRALYYLQI-----HPQELRQISHTEMEHEVACLDITPL------GDSNGLSPLCAIGLWTDISARILKLP-------SFELLHKEMLGGE----IIPRSILMTTF------------ESSHYLLCALGDGALFYFGLNIETG---------------LLSDRKKVTLGTQPTVLRTFRSLST-------------------TNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSK---LFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVL-HAHQF---LQNEYALSLVSCKLGK--------DPNTYFIVGTAMVYPEE-------AEPKQGRIVVFQY----------SDACEQYTENYKTVAEKEVKGAVYSMVEFNG-K--------------LLASINSTVRLYEWT-----------TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEG--------------------NFEEVMLIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPT-----------------------------QGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIK-------------------------SVGKIEHSLYPSQSHPLAGKHIPSFHTERKTE----------PATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH   [1262]
lcl|4012_Cre_unnamed_protein_product                                    ------------------------------------------------------------------MEVDSSALGAANTGC----------------------YNYVVTAHKPTAVTQSVVANFTGPNDINLITACCTRLEIRTLGAQGLYVCVC-VYAVLDVPIYGNVSSLQAF-------------------------------------------------------------------------RPRDL----QTDLLFILTEKYKFCVLQYDSAKG----------QLVTRSN--GDVADRTGRPTDNGQLGFVDPACRVIGLHLYDGMLKVIPMDERTGAL-------------------SEAYNV-----------------RLEELCVLDMAWLAPTSKGSAAGPSGSSAAAASGRPLLCVLHQD--PKGARHVKTYEAAL---------AAKELVEGPWQQQHVDA---GAGILIPVP------------------APL---GGVVVVGENVLSYCGG-PGA---------GPGGGAPVSAPLRQ--------TIITAWCPVDPDGS-----------------------------RYLLGDRLGGLHLLVLAH-D----GAGRVSGLRV------EPLGHTSTPSCLSYLDSGLTFVGSRSGDC-----------------QLVRISPTPVNQ--------------------------------PPSYVELVDSFPNLGPILDFVVMDL--ERQ----------GQGQLVTCSGVDGDGSLRVIRNGIGINRQATV-ELAGIKGVWSLRAH-YG----DEHDAYLVLTFVGETRLLALNAEEELDEAE-IPGFDAAAQTLWCGNTA--CDHLLQVTSSSVRLVDSSSLAL-VSEWRPPAGFSINVAAGSPT-----------------------------QVVVATGGGHLVYLEVQAQ-AGGAAVVEVANVTLDSEVACVDVSPLLLTAGPGGSAERSGLVAVGRW-DQTLQLLAVP-------GLTPLSVTPLGGE----VIPRSVLCVGL------------EGVPYCMVGLGDGALHTWRLEPATG---------------ALTDRKRVVLGTKPITLRTFRTAAAAAAAAGGDNGGARGGGGGGVSVFAASDRPTVVYSSNRKLMYSNLNENDVAHLSSFHAAAFPHSLAVASEAALTIGTADQLQKLHVRTVVLGEQPRRIAHHEAGRLLGVLTQR---------------------------------------------DPDGEERGQLRLLDDTTFDVV-ASYGL---APGEMPCGGSASAASA--------AGPATFIVGTVLLRPDE-------PEPSRGRILVLEYLPGGAGGAAAGGG------AVRLVTEKEVKGAAYNVRPFAGDK--------------ILASVNNKVTVYRWVVREGSGGPGGCGAYELASECHHLGNVLALYLAARGGLVVVGDLMRSVSLLSYNAEQG--------------------VLEH---RAADYNSGWTTAVEILDDDNYIAADNHCNLYVVRRNADSATDEERARLQVVGEFHTGTFINQMRNGSLVMRLPDSEHAGL-----------------------------PPPLLFAGTDGRLGVVARLPPALYEWATKLQTAMRSVVR-------------------------GVGGLDHEQW------------RAFANDRRCG----------EARGFVDGDLIESLLDL----------------------------------------   [1147]
'gi|66509028|ref|XP 396048.2| PREDICTED: similar to ENSANGP00000003051 [Apis mellifera]'                                    -------------------------------------------------------------------------------MS----------------------HHYVVTAHKPTAVTACVTGNFTSPTDLNLILAKNVRLEIYLVTPEG-------LRPLKEVGIYGKIAVVKFF-------------------------------------------------------------------------RPPHE----KKDLLFLLTTRYNAMILECIGEGENI--------EIITKAH--GNVADRIGKASETGIKAVIDPKARVIGLRLYDGLFKIIPLDKDNPEL--------------------KASSI-----------------RMEEHQVQDVNFLHGCAN-----------------PTLILIHQD--I-NGRHVKTHEISL---------RDKEFVKIPWRQDNVER---EAMIVIPVP------------------SPI---CGAIIIGQESILYHDG-NTY-------------VAVVPPIIKQ--------STITCYAKVDNQGL-----------------------------RYLLGDMAGHLFMLFVEQ-EKKADGTQVVKDLKV------ELLGEISIPECITYLDNGVIFVGSRLGDS-----------------QLVKLI-TKADE--------------------------------NGSYCVPMETFTNLAPIVDMAVVDL--ERQ----------GQGQMVTCSGAFKEGSLRIIRNGIGIEEHASI-DLPGIKGMWALKIG--G----GNFDNTLVLSFVGQTRILTLN-GEEVEETD-IPGFVADEQTFHTGNVT--NDLFIQITPTSARLISYETKTV-VSEWEPENKRTISVVACNGT-----------------------------QVLCAT-GNDLFYLEI-----SCGQILPKGFTTLQYEVACLDISPL------DGN-TEAKIAAVGLWTHISVHILTLP-------ALEEINKELLGGE----IIPRSILMTCF------------EGNTYLLCALGDGSMYYFTLHKQNG---------------ILSDKKKVTLGTQPTVLRTFRSLFT-------------------TNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGESPRRIAYQESSQTFGVITMRVDIQDSSGVSIV-RHSASTQAASTSSSSHIA--SYNKPTGHTASDICQEIEVHNLLIIDQHTFEVL-HAHML---MPTEYALSLISTKLGE--------DPTSYYIVGTALVHPDE-------TEPKMGRILLYHW----------SDG------KLTQVAEKEIKGSCYSLTEFNG-K--------------LLASINSTVRLFEWT-----------AEKELRLECSHFNNIIALYLKSKGDFILVGDLMRSLTLLQYKTMEG--------------------CFEE---IARDYNPNWMTAIEILDDDTFLGAENCFNLFVCQKDSAATSEDERQQMQEVGQFHLGDMVNVFRHGSLVMQNLGESSTPT-----------------------------QGCVLFGTVSGAIGLVTQIPFIFYEFLRNLEDRLTSVIK-------------------------SVGKIEHNFW------------RSFNTELKIE----------QCEGFIDGDLIESFLDLSPDKMAEVASGLMIDDPSGMKKEATVDDLVKIVEDLTRIH   [1138]
'gi|54638233|gb|EAL27635.1| GA20574-PA [Drosophila pseudoobscura]'                                    -------------------------------------------------------------------------------MS----------------------HHYVVTAQKPTAVVACLTGNFTSPTDLNLIIARNNQVEIDLVTPEG-------LRPLKEININGTVAVMRHF-------------------------------------------------------------------------RPPDS----NKDLLFILTRRYNVMILEARMVNDSI--------TVITKAN--GNVSDSAGIPSEGGVIAAIDPKARVIGMVLYQGLFTIIPMDKEASEL--------------------KATNL-----------------RMDELSVYDVEFLHGCLN-----------------PTIIVIHKD--N-DGRHVKSHEINL---------REKEFMKIAWKQDNVET---EATMLIPVP------------------SPI---GGVIVIGRESIVYHDG-SNY-------------HAVAPLTFRQ--------STINCYARVDGKGL-----------------------------RYLLGNMDGQLYMLFLGT-SETSKG-VTVKDIKV------EKLGEISIPECITYLDNGFLYIGARHGDS-----------------QLVRLS-SESIE---------------------------------GSYVIPVENFTNLAPILDIAVVDL--DRQ----------GQGQIITCSGSFKDGSLRIIRIGIGIQEHACI-DLPGIKGMWSLKVGIDE----SPYENTLVLAFVGLTRILTLS-GEEVEETE-IPGFASDLQTFLCANVE--HDQLIQVTSDSVRLVKSATKAL-ICEWRPEGDRSIGVVSCNST-----------------------------QIVLAS-ARDIFYIVI-----EDGRLVEKSRKTLAYEVACLDITPL------DETQNKSDLIAVGLWTDISAVILSLP-------DLETIYTEKLSGE----IIPRSILMTTF------------EGIHYLLCALGDGSMYYFIMDQTTG---------------QLTDKKKVTLGTQPTTLRTFRSFAT-------------------TNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALATKNSVILGTIDEIQKLHIRTVPLGEGPRRIAYQEASQTFAVSTLRIDVHGRGGAKPL-RNSASTQAQNITCSSNILPKPGGNNSTAANAEVGQEIDVHNLLVIDQNTFEVL-HAHQF---VAPETISSLMSAKLGD--------DPNTYYVVATSLVIPDE-------PEPKVGRIIIFHY----------HDN------KLTQVAETKVDGTCYALVEFNG-K--------------VLAGIGSFVRLYEWT-----------NEKELRMECNIQNMIAALYLKAKGDFILVGDLMRSITLLQHKQMEG--------------------IFVE---IARDCEPKWMRAVEILDDDTFLGSETNGNLFVCQKDSAATTDEERQLLPELARFHLGDTVNVFRHGSLVMQNVGERTTPI-----------------------------NGCVLYGTCNGAIGIVTQIPQDFYDFLHGLEERLKKIIK-------------------------SVGKIEHTYY------------RNFQINTKVE----------PSEGFIDGDLIESFLDLSRDKMRDAVLGLEL-TLNGERKGADVEDVIKIVEDLTRMH   [1140]
'gi|21357503|ref|NP 650257.1| DDB1 CG7769-PA [Drosophila melanogaster] >gi|7299719|gb|AAF54901.1| CG7769-PA [Drosophila melanoga'    -------------------------------------------------------------------------------MS----------------------HHYVVTAQKPTAVVACLTGNFTSPTDLNLIIARNNQVEIDLVTPEG-------LRPLKEININGTIAVMRHF-------------------------------------------------------------------------RPPDS----NKDLLFILTRRYNVMILEARMVNDVI--------TVVTKAN--GNVSDSVGIPSEGGVIAAIDPKARVIGMCLYQGLFTIIPMDKDASEL--------------------KATNL-----------------RMDELNVYDVEFLHGCLN-----------------PTVIVIHKD--S-DGRHVKSHEINL---------RDKEFMKIAWKQDNVET---EATMLIPVP------------------SPI---GGVIVIGRESIVYHDG-SNY-------------HAVAPLTFRQ--------STINCYARVSSNGL-----------------------------RYLLGNMDGQLYMLFLGT-AETSKG-VTVKDIKV------EQLGEISIPECITYLDNGFLYIGARHGDS-----------------QLVRLN-SEAID---------------------------------GSYVVPVENFTNLAPILDIAVVDL--DRQ----------GQGQIITCSGSFKDGSLRIIRIGIGIQEHACI-DLPGIKGMWSLKVGVDE----SPYENTLVLAFVGHTRILTLS-GEEVEETE-IPGFASDLQTFLCSNVD--YDQLIQVTSDSVRLVSSATKAL-VAEWRPTGDRTIGVVSCNTT-----------------------------QILVAS-ACDIFYIVI-----EDGSLREQSRRTLAYEVACLDITPL------DETQKKSDLVAVGLWTDISAVILSLP-------DLETIYTEKLSGE----IIPRSILMTTF------------EGIHYLLCALGDGSMYYFIMDQTTG---------------QLTDKKKVTLGTQPTTLRTFRSLST-------------------TNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYPDSLALANKNAVILGTIDEIQKLHIRTVPLGEGPRRIAYQESSQTFAVSTLRIDVHGRGGAKPL-RNSASTQAQNITCSSNFLPKPGGGNSTAANAEVGQEIDVHNLLVIDQNTFEVL-HAHQF---VAPETISSLMSAKLGD--------DPNTYYVVATSLVIPEE-------PEPKVGRIIIFHY----------HEN------KLTQVAETKVDGTCYALVEFNG-K--------------VLAGIGSFVRLYEWT-----------NEKELRMECNIQNMIAALFLKAKGDFILVGDLMRSITLLQHKQMEG--------------------IFVE---IARDCEPKWMRAVEILDDDTFLGSETNGNLFVCQKDSAATTDEERQLLPELARFHLGDTVNVFRHGSLVMQNVGERTTPI-----------------------------NGCVLYGTCNGAIGIVTQIPQDFYDFLHGLEERLKKIIK-------------------------SVGKIEHTYY------------RNFQINSKVE----------PSEGFIDGDLIESFLDLSRDKMRDAVQGLEL-TLNGERKSADVEDVIKIVEDLTRMH   [1140]
'gnl|CMER|CMR264C UV-damaged DNA binding protein'                                    --------------------------------------------------------------------MSTDSLEPVSVSESVAGAPAIEESAQLPLEESIGCGLYVVTAAQPSIVTHARVARFISPDQPSVLLVRLNRIEVYEVSTDSTKSHESALVAYANLPVFGRIAALEVLPGVGLCERATARGTRVASPVGALQPSERLSSLNLHGGTPRSGSKRARTSSRHKVEAPLKPVPETARTVQVLPSDAGDQ----STDAVFILTERLDFAVIKYDTRLQ----------GVATLVA--GSLASKLGRRCPLGEFVALDPSARCLAVYAYDGLLKVVPGSLMG-----------------------EAFEV-----------------RLDVVQVQSMEFLIGTEH-----------------PTLAIIHTD--YLHNRHLVSYEILL---------GRQDVREGPIAQQYLDA---SAELIIPVPPAPN--------DSAND-GAC---GGFVVACDTSLALHPG-RSGVAKQVIHFH--GGQF----------------APMRCFCPISGIGGSSKSASVEANRQDHFETGLEMLAAAGYHAHYLLGDRDGFLYVLSVGAE----------VGMRL------ECVCESSVASAIAYLGSDLVFVGSALGDS-----------------QLVRLL-PSQTESPELVQTTLFATASASSHERRESRAERAECQLWFG--QVVQCYTNIGPIQDLLVTGD--DSF----------SDGHIITCSGVSRMGSLRIIRNGIGFVEHAAV-ELDGIKALFTLPS----L-TSPEWDEFLVVSFTAETRVLRLAAHDEL--VE-VESLAVDEATILAMRLPAE-QLALWVTASYVGLVDLTLLERPAVAWTPPSSEQITNAVFDEL---------------------------HKLVLVSTSNAQLYVLQ-----QRKTSLVPVGSQTLPAEVACIHAA--------------YGIVALGTWAESRIRLFRLHEDTGNRWELECIRESALPST----SVPRSVLLTYLDDHGGLMADHGGRAHLCLLVAVGDGRLFAFNVSQPDAKRSGPEPEDLSKCELQLQHPRQLRLGSRPAALNNLQLHGM-------------------RYVFAACGRASVIHAHHGTLFCGNVNLRDVTRAVRFHTKGFPDSIAVATEQGLALGGIEHIQQLHIRRHDLREQPRRIAHLRGYICLLTVSIVF-----------------------------------------------GEERHHVRLLNDETLETI-TSHDL---AMNEHGLSLVAIPE------------RDVFVVGTAYVLPSE-------MEPSRGRILVFSR----------E--------ELLLLNELYTPGAVYTMSALAD-PSDRTCRFPASAARFLAAGVNNVVILYDWGQSGHG------DDYELREVARHLGHVLVLRLEARGDQLLVGDLMKSLCVLQLVLPEGETSDG------------ASPCLKA---VAWDYETAWITACAFLNEDTYLAADNSYNLLSLQRNPHETRSEFRHALNRAGAFHLGDLVNVFRRGKLVTEASGNEEAGTGNGHSTIDTESTRDVARASTGTTTADNVSRQTLLFATTAGAIGIIVPLDPAQHRMLSRVEKALRSLTDHPAEAGAADNGHERVRRSPLTSIRLGVEGFAHADW------------RTPLSERALNSLHSMTCFDLPRRGFVDGDLVERFRELEPTEMEFVAAQVGA----------SIEHIKLLVDDLARLH   [1372]
'gi|83768922|dbj|BAE59059.1| unnamed protein product [Aspergillus oryzae]'                                    -------------------------------------------------------------------------------------------------------MAYVVPIHKASSVRHALKLQFLNPEEESLVVAKANRLEIYTLTPDG-------LNLAASCTLYAKVSMLARL------------------------------------------------------------------------PAPAHS----PTDHLFVGTDRYTYCTLSWDSAQN----------RIRTERN-YVDIADPSSRESQTGNRCLIDPSGRFMTLEVYEGLVAVVPIVQLPARKRGRAPAVPTGPDAPKVGELGELTTA-----------------RIDELFVRSSAFLHVQSGL----------------PRLALLYED--NQKKVRLMVRELNYTSATASTS-ADATLTHIADFAQELDL---GASHLIPVP------------------APL---GGLLILGETSIKYVDD-DNN-------------EIISRPLDEA--------TIFVAWEGVDSQ-------------------------------RWLLADDYGRLFFLMLVL-----DSDNQVQGWKL------DHLGNTSRASALVYLGGGIVFVGSHQGDS-----------------QVLRIG--------------------------------------NGSF-EIIQALSNIAPILDFTIMDLGNRTSESQT-HEFSSGQARIVTGSGAFDDGTLRSVRSGVGMEELGVLGDMEHITDLWGLQV----QAG-GDTLDTLLVTFIDETRVFHFSPDGEVEELDHFLGLSLSENTLLAANLP--RGRILQVTEQRVLIADLEGGMV-VYEWTPPNELVITAASANDD-----------------------------SLVLVIGGELMTVLDIGTE----AQVITEKKFGADSQVSGVTVPAS-----------PTEVCVVGFPQLAKVSVLRLR-------DLTEVHTTSLGPAGE--AFPRSVLVADV----------LADSPPTLFISMADGSVITYSFKTDDY---------------SLSHMNKLILGSEQPTFKKLPRGDG------------------LYNVFATCENPSLIYGSEGRIIYSAVNSEGASRVCHFNSEAYPGSIAVATLHELKIALVDRERTTQIQTLQIGATVRRVAYSPSEKAFGIGTIERKLA-----------------------------------------DGAEIVTSRFMLADEVLFRQL-DSFEL---RPEEIVESVIRAEFPAGKDENGREMTKDRFVVGTAYLDDEG-------EESIRGRILMFEI----------DNGR-----KLTKVAELPVKGACRALAMLGDK---------------IVAALVKTIVMYKVVNNNFG-------TMKLEKLASFRTSTAPVDVTVVGNVIVVSDLMKSVCLLEFKEGEN----G------------LPDSLTE---VARHFQTVWATGVACIDKDTFLESDAEGNLIVLRRNLAGVEEDDRRRLEVTSEISLGEMVNRIRPVNIQQL----ASVTV-----------------------------TPRAFLGTVEGSIYLFAIINPEHQDFLMRLQATMAGKVE-------------------------SLGEMPFNEF------------RGFRSMVREAT---------EPYRFVDGELIEQFLNCEPELQEEIVNSVGM---------MNVHEVKVMIEALRRLH   [1139]
'gi|70992271|ref|XP 750984.1| hypothetical protein Afu6g10980 [Aspergillus fumigatus Af293] >gi|66848617|gb|EAL88946.1| CPSF A s'    -------------------------------------------------------------------------------------------------------MAYVVPIHRASSIRHALKLNFMNPEEDCLVVAKSNRLEFYSPTPDG-------LDLVASCAIYARVTMLARL------------------------------------------------------------------------PAPANS----PTDHLFVGTDRYTYFTLSWDSSEK----------RVRTERD-YVDMSDPSSRESQTGNRCLIDPSGRFMTLEIYEGVIAVIPIIQLPSKKRGRAVALPSGPDAPRVGELGEPTTA-----------------RIEELFVRSSAFLHVQEGL----------------PRLALLYED--NQKKVRLRVRELQYHAATGSNSTADATFGEPADFTQDLEL---GSSHLIPVP------------------APL---GGLLILGEMSIKYVDA-DNN-------------EIISRPLDEA--------TIFVAWEQVDSQ-------------------------------RWLLADDYGRLFFLMLVL-----DSDSQVESWKL------DHLGNTSRASVLVYLGGGILFLGSHQGDS-----------------QVLRIS--------------------------------------NGPL-EVVQTLSNIAPILDFTIMDLGNRSSESQT-HEFSSGQARIVTGSGAFDDGTLRSVRSGVGMEELGVLGDMDHITDLWGLQV----GSS-GDFLDTLLVTFVDETRVFRFSSDGEVEEMDHFLGLSLSESTLLATNLP--GGRILQVTEQRVLIAEIEGGMV-IYEWTPPNQFIITAASANDD-----------------------------SIVLVAGGELVTVLNITNE----VQVVTQKDFGADSQISGVTVPSS-----------PTGVCIAGFPQLAKVSVLKLQ-------DLSELHTTSVGMAGE--AFPRSVLVANV----------LTDSPPTLFVSMADGSVITYSFNTNNF---------------SLTGMTKLILGSEQPTFKKLPRGSG------------------LFNVFATCENPSMIYGSEGRIIYSAVNSEGASRICHFNSEAYPESIAVATSHDLKIALVDKERTTQIQTLPIGATVRRVAYSPSEKAFGIGTIERKLV-----------------------------------------DGTEIVKSRFVLADEILFRRL-DAFEL---RPEELVESVIRAEFPAGKGANDRDEVKDRFIVGTAYLDDEG-------DESIRGRILIFEV----------DNGR-----KLTQVAELPVKGACRALAMLGDK---------------IVAALVKTVVVYKVINNNFG-------AMRLEKLASYRTSTAPVDVTVTGNLIAVSDLMKSMCLVEYKEGEN----G------------TPDTMTE---VARHFQTVWATGVANIAPDTFLESDAEGNLIVLHRNTTGVEEDDKRRLEVTGEISLGEMVNRIRPVNIQQL----ASVAV-----------------------------TPRAFLGTVEGSIYLFAIINPDHQDFLMRLQATIAGKVE-------------------------LVGNIPFNEF------------RGFRSMVREAK---------EPYRFVDGELIERFLTCEPSLQEEIVSTVGK---------MSVDEVKGMIEALRRLH   [1140]
'gi|67516629|ref|XP 658200.1| hypothetical protein AN0596.2 [Aspergillus nidulans FGSC A4] >gi|40747539|gb|EAA66695.1| hypotheti'    -------------------------------------------------------------------------------------------------------MSYIAPIHRASSIRHALKLHFLNAEDECLVVAKANQLEFYSVTPDG-------LALVTSCSIFARVTMLACL------------------------------------------------------------------------PAPANS----PTDHLFVGTDRYSYFTLSWDSARN----------QVRTERD-YVDIADPSSRDARTGSRCMIDPSGRFMTLEIYDGMIVVIPIIQLPSKRRGRQVALPTGPDAPRIGELGEPIIT-----------------RIDELFVRSSAFLHVQAGS----------------PRLALLYED--NQKKVKLKVRELKYSTAAG----AESEFTSIADYAQELDL---GASHLIPVP------------------APLAAAGGLLILGETSIKYVDA-DNN-------------EIVSQPLEEA--------TIFVAWEQVDSQ-------------------------------RWLLADDYGRLFFLMLVL------RNSEVERWEL------HSLGNTSRASVLVYLGGGVVFVGSHQGDS-----------------QVIRIG--------------------------------------DQSF-QVIQTLSNIAPVLDFTIMDLGNRTSENQM-HEFSSGQARIVTGSGAFDDGTLRSVRSGVGLEELGVLGDMEHITDLWGLQV----GSR-GDFLDTLLVTFVNETRVFRFSPDGEAEELESFLGLSLSENTLLAANLP--GSRILQVTEQRVLIADIECGMT-IFEWTPKNQLIITAASANDD-----------------------------TIVLVAGGKHVTVLDIQSE----ARVVSEKDFGADNQISGVTLPTT-----------PTDVCIVGFPQLAKVSVLKLQ-------DLSHISSTSLGPAGE--AFPRSVLVASV----------LAENAPTLFISMADGSVITYDYNDQDH---------------SLSGMNKLVLGSEQPTFKKLPRGNG------------------LSNVFATCENPSLIYGSEGRIIYSAVNSEGASRICHFNSEAYPESIAVATAQELKIGLVDKERTTQIQTLPIKATVRRVAYSPSEKAFGMGTIERKLV-----------------------------------------SGEEIVKSQFVLADEILFRRL-DAFDL---EGEEIVECVIRAEAPESKDG----EAKDRFVVGSAYLGEDD-------GDSTLGYIRVFEV----------DNGR-----KLAKVAQERVKGACRALAVMGDK---------------IVAALVKTVVVFQVVPRS-G-------GLQLQRLASYRTSTAPVDITVTRNVIAIADLMKSVCVVEYHEGEN----G------------APDKLVE---VARHFQTVWATGVTSVAPDTYLESDAEGNLIVLRRNRSGVEEDDRRRLEVTGEICLNEMVNRIRPVNIQQL----PSATV-----------------------------VPRAFLATVEGSIYLYAIINPDYQDFLMRLQATMASRAD-------------------------SLGGIPFTDY------------RAFRTMTRQAT---------EPYRFVDGELIERFLTCEPAVQKEIVDIVGS----------SLEEVRAIVEALRRLH   [1132]
'gi|85107301|ref|XP 962347.1| hypothetical protein [Neurospora crassa N150] >gi|32411959|ref|XP 326460.1| hypothetical protein ['    -------------------------------------------------------------------------------------------------------MAYVAPIHRPSSVRHALRINLLSPEEESLIIAKTNRIEIWKLADGH-------LSMIHSKVINGTITILQKL-------------------------------------------------------------------------QPKDH----PTDLLFVGTDQFEYFTAEWDRETQ----------QLKTLNR-FSDPGERHMRDSQSQNKCIVDPSGRFMAMHLWEGVLSVWRLGNRKNTA----------------TTLDILVQV-----------------RLSELFIKGSTFLYTETGI----------------PKVAFLYRNQANSNETKLATYRLTSDDRHT----EISKFDPTRDREIDADVEDPGAGILIPVKKVEEEVKRHHFRNTEQAKPHV---GGLIVVGETRLLYIDE-VTK-------------TQVESALREP--------SIFVAWAEYDPT-------------------------------HYFLSDDYGNLHLLTILT------EGAVVTGMDV------SNIGKTARAHVLTYLGDDMLFVGSHYGNS-----------------QLYRLNLLSED---------------------------------LSEILQLVQVLENIGPVTDFTVMDMGNRENDSQLGNEYSSGQARIVTASGVFKDGTLRSVRSGVGLQDIAILGELQHTRALFSLQSYN------SPRVDTLVASFLTDTRIFKFDPHGEIEEVDNYYGMDLQHQTLLATNLD--NGQLLQVTTAAATLLDAESGVT-IASWAPEGDRQIINASANKH-----------------------------WLLLSVQGTTLVSINIDND----LTVVQEKDISEQDQIACIHVAPQ-----------LSDVGVVGFWTSGTVSIIDMS-------TLEPIHGESLRRSADDASIPRDLVLAKV---------LPNAPGMTLFIAMEDGNVVTFNIG-EDL---------------TFSGRKSVILGTREARFHLLPQQDG------------------IYSIFATTEHPSLIYGSEGRIIYSAVTAEDATCVCPFDSEAFPGAVILSTENEIRISEIDTARQTHVRSLELGEMVRRIAYSPSEKGFGLGCIRREVV-----------------------------------------NGEEIIHSSFKLVDEILFARVGKEFMLGTSSYSELVEDVIRAELPDSYG-----NLVERFIVGTSFLEDPDRGA----GTDKRGRILVFGI----------DSNR-----DPYLVLKHELKGGCRALAVMGSK---------------IVAALHKTVVISQYEETSST-------EAHLVKLASYRCTTYPVDIAVHGNMIAVADMMKSATLVEYVPAKT-----GGEKS-------EAPKLVE---CARHRHSAWATAVAHVEGESWLEADANGNLIVLQRNAEGVTVEDQRQLRITSELNLGEQVNKIRPIKVETS----PNAII-----------------------------IPRAFLATAEGGIYMFGTIARE-QDLLLRFQDKLAAVIK-------------------------TVGELDFNSY------------RAFRNAERGPEADGTT----GPVRFLDGELLERFLDVDEKTQKEICEGLGP----------SVEQMRNMVEELRRMH   [1158]
'gi|46121747|ref|XP 385428.1| hypothetical protein FG05252.1 [Gibberella zeae PH-1] >gi|42552645|gb|EAA75488.1| hypothetical pro'    -------------------------------------------------------------------------------------------------------MAYVAPIHRATSIRHALRANVIDPEIDDLIVAKANRLEIWRLTEEG-------LVCQQTKLIHGTISMLQRL-------------------------------------------------------------------------RPKGS----ETDLLFIGTDRLQYFNLIWNDATK----------QLETIERVIEDLSEPYMRQSQSQNKCLVDPTGRFLAMHLWEGVLNVFKLPTRKGST----------------NKLEVLDQV-----------------RLTELFMKASTFTYSYTNH----------------PTIAFLYKTQMDQEETRLVIYRLTHDDKGN----TVSKFDPHKDRELDIEIPDPYASMLIPVPLDEE--KRYNVRNNQGAKPHL---GGLVVVGETLLTYYDG-QTH-------------RSVSAGLKDP--------RIFVAWAEYDST-------------------------------RYLLADDYGRLDLLTIRT--NLEPTGVVVTGMTVEPFEFDNSPAITSRASSLVYLGNGNLFVASHHGDS-----------------QLYQINI-------------------------------------DTKAAMLVQSFSNNAPILDFSIMDMGNREGDTQSGNVFSSGQSRIVAGCGAYRDGTLRSIRSGVGLEDRGVLDELEGTRGLFTLHSYG------SEMVDTLVVSSITETRILSFDFEGGIEEIYSFQGMSLDSETLLASNLP--SGQLLQITPKSVVLLDPEGGTT-ISKWDVPDGKTITRASANSK-----------------------------WALLSVDGTSLVSLNLLQNLAVNAQQINNDSTSQPDQISCIHAARD-----------SPDLGVVGWWSSGQISLIDMA-------SLKPLHGESMRQTEDSATVPRDVALVQL--------HPPDISGPTLLVAMEDGNIVTFNVSTKGF---------------SVSGRKSVTLGSNPARLHILPQEDG------------------TSNVFVTTEHASLIYSSEGRIIFSATTADDATFVAPFSSHAFPDSVVLSTDQHIRICHVDRERLTHVKALPVNETVRRVAYSPGLKAFGLGSIKRELV-----------------------------------------NNEEVVTSSFRLVDEIVFKELGSPFPLNGSSTLELVECVIRAELPDVGG-----NPTERFIVGTSFISDGG----VEDPNGTLGRILVLGV----------DANR-----QVYQIVSHNLKGPCRCLGMIEDN---------------IVAGLSKTVVVYSFSQETSS-------SGSLQKLAAYRPAAIPIDIDVSGNMIGVGDLMQSLSLVEFIPAQD---------G-------NKAQLQE---RARHFESLWTTAVCHIEGERWLEADSRGNLVVLQRNVNAPTEQDRRRMEITSEMGIGEQINRIRKLNVPAA----ENNIV-----------------------------HPRAFLASAEGSLYLYGDIAPQYQDLLMTFQSRMEECVL-------------------------ALGNVEFKLW------------RSFRNDNRESE---------GPYRFIDGEMIERFLDMGEEQQELVCDGLGP----------TVEDMRNMIEELRRMH   [1161]
'gi|88180116|gb|EAQ87584.1| hypothetical protein CHGG 04203 [Chaetomium globosum CBS 148.51]'                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------MVNGTISILQKL-------------------------------------------------------------------------RPKDS----KTDLLFVGTERFEYFTLAWNPETS----------QLHTIDP-FTDPGERHMRDSQSQDRCLVDPSGRYLAMHLWEGVLTMLRLGERKNKR-----------------GLAWMDQV-----------------RLSELFIKASTFLYTETGH----------------PKIAFLYQSRADSADAKLATYRMTIDDRNT----EASKFDPDRDREIDTDIPDPSASILIPVRKVEEEVKRHNVRNVESAKAHI---GGLLVVGETRLLYIDE-VTK-------------ATVQSALKQA--------SIFVAWAEYNET-------------------------------NYFLADDYGNLHLLTLVR---ESPDSVVVTSMEV------NRIGKTSRASHLVFLGGDMLFVASHYGDS-----------------QLFRLDFQNED---------------------------------VPPI-QLVQTLANIGPILDFAIMDMG-RGDEGQQGNEYSSGQARIVTCSGVHKDGSLRSVRSGVGLEDVGILADLEHCRGLFSLKTYE------APKTNILAASFLTETRVFKFDPQGEVEELDSFAGMTFNQQTLLARCLS--TAQILQVTPAAVTLLDAESGLT-IDSWTPGAQKSIISASGNNK-----------------------------SLLLSVDGTELVLFSIDIN----LRLVRTKEIGYQDQIACIHVPPL-----------RNDLAVVGFWSSGTVSIIDLP-------SLEPMHGEQLRTSPDDASIPRDLALVKL---------LDNVGGGTLFVAMQDGNVITFNLS-ENF---------------RLTGRKRVILGMRQARFHLLPQPDA----------------PHIYSIFATTEHPSLIYGSEGRIVYSAVTAEEATYICPFDTEAFPDCIVLATDNQLKISHIDRERRTHVKPLPMNEMVRRIAYSPKEKVFGLGCIRRELV-----------------------------------------NGEEIVESSFKLVDEVIFDRVGKTFPLGVPSRTELVECVVRAELRDSYG-----NPAERFLVGTSFLPDPDYGPGPGPAADARGRLLVLGV----------DADR-----NPYLVLSHDLKGACRCLAVLGEDAGPNAAGL-------IVAGLTKTVVVCRYDETSST-------TAELTRLASYRPSSYPAEIAVRGSTIAVADLMKSISLVEYIPAGSSSGSGGGGSGSGESGSDDGPRLVE---HARHFSSVWATAVGFVEEGSWLEADAQGNLMVLRRNVEGVTAEDKRRMEVTSEINLNEMVNRIRTIDVETT----PGAMI-----------------------------VPKAFLGTVEGGIYMFGTVAPHVQDLLLRFQSRLADVLK-------------------------TAGDIEFRTY------------RAFRNAEREGD---------GPFRFVDGELLEKFLDVDETTQEAVCKGLGP----------TVEDMRNLVEELRRMH   [1127]
;
END;


BEGIN CODONS;
	CODESET  * UNTITLED = Universal: all ;
END;


BEGIN ASSUMPTIONS;
	OPTIONS  DEFTYPE=unord PolyTcount=MINSTEPS ;
	EXSET * UNTITLED  =  1-389 408-424 434-439 450-458 476-478 488-511 528-562 574-605 623-647 675-691 698-747 761-779 808 822-832 851 856-862 877-882 902-905 920-952 958 967-976 995-1011 1019 1025-1037 1047-1053 1065-1087 1098-1116 1134-1162 1176 1241-1303 1320 1326-1328 1339-1357 1370-1376 1390-1414 1431-1446 1450-1473 1519-1538 1543-1545 1610-1658 1677 1689-1718 1729-1740 1751-1760 1778-1817;
END;


BEGIN MacClade;
	Version 4.0  87;
	LastModified -1055497294;
	FileSettings editor  '0' '0' '1' '1';
	Singles 100;
	Editor 00011001111111100100010010 '1' '24' Geneva '14' '394' '1' all;
	EditorPosition  '44' '298' '859' '1267';
	TreeWindowPosition  '46' '6' '997' '1630';
	ListWindow Characters closed Geneva '9' '50' '25' '273' '366' 000;
	ListWindow Taxa closed Geneva '9' '50' '10' '276' '490' 100000000;
	ListWindow Trees closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow TypeSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow ExSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow CharSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow TaxSets closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow CharPartitions closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow CharPartNames closed Geneva '9' '50' '10' '276' '490' ;
	ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ;
	ChartWindowPosition  '52' '30' '968' '1620';
	StateNamesSymbols closed Geneva '9' '10' '50' '30' '148' '220';
	WindowOrder  Data;
	OtherSymbols &/ 00 ?-;
	Correlation  '0' '0' '1000' '0' '0' 10011010;
	Salmo 00000001;
	EditorFile  '4';
	ExportHTML _ MOSS  '100' 110000;
	PrettyPrint 10;
	EditorToolsPosition  '871' '25' '115' '165';
	TreeWindowProgram 10;
	TreeWindow 0000;
	Continuous  '0' '3' 1;
	Calculations 0000001;
	SummaryMode  '0' '0' 0;
	Charts  Geneva '9' (normal) 0010;
	NexusOptions  '0' '0' '50' 001011001;
	TipLabel  '1';
	TreeFont  Geneva '9' (normal);
	TreeShape  1.0 1.0 0100;
	TraceLabels 0101;
	ChartColors  '0' '0' '65535' '9' '0' 1;
	ChartBiggestSpot 1;
	ChartPercent 10;
	ChartBarWidth  '10' 1;
	ChartVerticalAxis 10101;
	ChartMinMax  '0';
	TraceAllChangesDisplay  '1' 1;
	BarsOnBranchesDisplay  '0' '0' '60000' '10000' '10000' '10000' '10000' '60000' '65000' '65000' '65000' '6' '1' 0000101;
	ContinuousBranchLabels 0;
	AllStatesBranchLabels 1;
	IndexNotation  '2' 1;
	PrintTree  10.00 '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' Geneva '9' (normal) Geneva '10' (normal) Geneva '9' (normal) Geneva '9' (normal) Geneva '9' (bold ) Geneva '9' (normal) Geneva '9' (normal) '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '1' '1' '1' '1' '0' '0' '-39' '4' '-40' '0' '1' '2' '1' '8' '0' '0' '0' '2' 1000111000000000000100000111000;
	MatchChar 00 .;
	EntryInterpretation 01;
	ColorOptions 00;
	TreeTools  '0' '5' '4' '0' '10' '4' '0' 00100111111101110;
	EditorTools  '0' '0' '0' '1000' '0' '0' '6' '3' '1' 100010101110011;
	PairAlign  '2' '2' '3' '2' '1' '1' '2' '1' '3' 1010;
	BothTools  '1';
END;