#NEXUS 
[MacClade 4.08 registered to Tomoaki Nishiyama, National Institute for Basic Biology]


BEGIN DATA;
	DIMENSIONS  NTAX=95 NCHAR=1529;
	FORMAT DATATYPE=PROTEIN  SYMBOLS = " 1 2 3 4"  MISSING=? GAP=- ;
MATRIX
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'gi|6967116|emb|CAB72470.1| putative protein [Arabidopsis thaliana]'                                    ---------------------------------------------------------------------------------------------------------------------------------------------MLNV-----------------------------------------------------------------------------------------------------FFWVA------------------GDVGSVYFGPNHPMKPHRLCMTHHLILAYGLH--SKMEVY-------------------------RPHKAYPIEMAQFHSPDYVEFLQRINPENQNLFPNEMARYNLGE--DCPVFEDLFEFCQLYAGGTIDAARRLNNKLCDIAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDI-------DVHH--GDGVEEAFYFTD-----------RVMTVSFHKF-GDKFFPGTGDVK------------------EIGEREGKFYAINVPLKDGIDDSSFNRLFRT-----VV----------EIYQPGA--------IVLQCG-----ADSLARDRLGCF-------------------NLSID----------------GHAECVKFVKKFNLPLLV-TGGGGYTKENVARCWTVETGILLDT--ELPN------EIPENDYIKYFAPDFS-LKIP----G-GHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPD-FYIPD---FDE--------D-EQNPDVRADQR---------------------------SRDKQIQRDD---EYFDGDND------NDAS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [419]
'gi|30692236|ref|NP 190054.2| HDA9; histone deacetylase [Arabidopsis thaliana] >gi|30387509|gb|AAP31920.1| At3g44680 [Arabidopsi'    ------------------------------------------------------------------------------------------------------------------------------------------MRSKDKI-----------------------------------------------------------------------------------------------------SYFYD------------------GDVGSVYFGPNHPMKPHRLCMTHHLILAYGLH--SKMEVY-------------------------RPHKAYPIEMAQFHSPDYVEFLQRINPENQNLFPNEMARYNLGE--DCPVFEDLFEFCQLYAGGTIDAARRLNNKLCDIAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDI-------DVHH--GDGVEEAFYFTD-----------RVMTVSFHKF-GDKFFPGTGDVK------------------EIGEREGKFYAINVPLKDGIDDSSFNRLFRT-IISKVV----------EIYQPGA--------IVLQCG-----ADSLARDRLGCF-------------------NLSID----------------GHAECVKFVKKFNLPLLV-TGGGGYTKENVARCWTVETGILLDT--ELPN------EIPENDYIKYFAPDFS-LKIP----G-GHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPD-FYIPD---FDE--------D-EQNPDVRADQR---------------------------SRDKQIQRDD---EYFDGDND------NDAS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [426]
'gi|15229981|ref|NP 190035.1| unknown protein [Arabidopsis thaliana] >gi|7635471|emb|CAB88531.1| putative protein [Arabidopsis t'    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAF-------------------SMLFT----------------GHAECVKFVKKFNLPLLV-TGGGGYTKENVARCWTVETGILLDT--ELPN------EISENDYIKYFAPDFS-LKIP----G-GHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPD-FYIPD---FDE--------D-EQNPDVRVDQR---------------------------SRDKQIQRDD---EYFDGDND------NDAS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [158]
'gi|17017402|gb|AAL33655.1| histone deacetylase [Zea mays]'                                    ------------------------------------------------------------------------------------------------------------------------------------------MLEKDRI-----------------------------------------------------------------------------------------------------SYFYD------------------GDVGNVYFGPNHPMKPHRLCMTHHLVLSYGLH--QKMEIY-------------------------RPHKAYPIELAQFHSADYVEFLHRITPDSQHLYASELTRYNLGE--DCPVFDNLFEFCQIYAGGTLDAARRLNHKICDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDI-------DVHH--GDGVEEAFYFTD-----------RVMTVSFHKY-GDLFFPGTGDIK------------------DIGEREGKYYAINIPLKDGIDDTSFTRLFKT-IIAKVV----------ETYLPGA--------IVLQCG-----ADSLARDRLGCF-------------------NLSIE----------------GHAECVKFVKKFNIPLLV-TGGGGYTKENVARCWAVETGVLLDT--ELPN------EIPKNEYIEYFAPDYT-LKVP----N-LNMDNLNSKTYLSSIKVQVMESLRYIQHAPGVQMQEVPPD-FYIPD---FDE--------D-ELDPDERVDQH---------------------------TQDKQIHRDD---EYYEGDND------NDHDDGTR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [430]
'gi|32490318|emb|CAE04901.1| OSJNBa0042I15.23 [Oryza sativa (japonica cultivar-group)]'                                    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ME----------------------------------------------------------------------------------------------------------------------------------------------------------------------LKKPFISLT-----------GVMTVSFHKY-GDFFFPGTGDIK------------------DIGEREGKYYAINIPLKDGIDDSGFTRLFKT-VIAKVV----------ETYLPGA--------IVLQCG-----ADSLARDRLGCF-------------------NLSIE----------------GHAECVKFVKKFNIPLLV-TGGGGYTKENVARCWAVETGVLLDT--ELPN------EIPDNEYIKYFAPDYT-LKVS----N-VNMDNLNSKSYLSSIKVQVMESLRAIQHAPGVQMQEVPPD-FYIPD---IDE--------D-ELDPDERVDQH---------------------------TQDKQIHRDD---EYYEGDND------NDHEDGAR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [254]
'gi|15230469|ref|NP 190052.1| unknown protein [Arabidopsis thaliana] >gi|6967114|emb|CAB72468.1| putative protein [Arabidopsis t'    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAF-------------------SMLFT----------------GHAEC-----------------GGYTKENVARCWTVETGILLDT--ELPN------EIPENDYIKYFAPDFS-LKIP----G-GHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPD-FYIPD---FDE--------D-EQNPDVRVDQR---------------------------SRDKQIQRDD---EYFDGDND------NDAS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [142]
lcl|Ppa_HDA9_12_1_unnamed_protein_product                                    -----------------------------------------------------------------------------------------------------------------------------------------GF-GNIRMLSRFSALVLYQTQKRQVHQKVKESRNSVKMNPCKQCEGRGLQLKVQSPNSLRIIVVILFRILFAEPASLSMTYVTQNTRKARDFCEELFTCGFEVHVTEARNFLCT------------------GDVGSVYYGPNHPMKPHRLCMTNSLVLAYGLH--NKMEIY-------------------------RPHKAYPVELAQFHSVDYVEFLGRITPESQEKYAAELIRYNMGE--DCPVFDNLFEFCQIYAGGTIDAAHRLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDLVLGILELLKYHARVLYIDI-------DIHH--GDGVEEAFYLTD-----------RVMTVSFHKF-GDYFFPGTGDVKKETGVFKHYHVINFEILQDVGEREGKYYAINVPLKDGIDDANFIRMFRV-VIQKVV----------EVYQPGA--------IVLQCG-----ADSLAGDRLGCF-------------------NLSID----------------GHSECVKFVKKFNIPLLV-TGGGGYTKENVARCWTVETGVLVDT--ELPN------EIPDNDYLKYFKPDCT-LKTT----SGNHMENLNGKTYLSTIKQQVMENLRRIAHAPSVQMHEVPPD-TYIPE---FDE--------D-ELNPDERMDQH---------------------------TQDKHIQREE---EYYEDDND------NDHDMDDS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [550]
lcl|Smo_HDA9_18_2_unnamed_protein_product                                    -----------------------------------------------------------------------------------------------------------------------------------------MPPAKDRV-----------------------------------------------------------------------------------------------------SYFYDGKRVTQLSRLTDFARFLPGDVGSVYYGPNHPMKPHRLCMTHSLVLAYGLH--NKMEIY-------------------------RPRKAYPAELAQFHSTDYIDFLHRITPEMQDQYAKELLMYNMGE--DCPVFDNLFEFCQIYAGGTIDAAHRLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDLVLGILELLKYFPRVLYIDI-------DIHH--GDGVEEAFYLTD-----------RVMTVSFHKF-GDYFFPGTGDVK------------------DVGEREGKYYAVNVPLKDGIDDSSFIRLFRV-VISKVV----------EFYQPGA--------VVLQCG-----ADSLAGDRLGCF-------------------NLSIQGFISQLQSYICLRILTGHAECVNFVKKLGIPLLV-TGGGGYTKENVARCWTVETGVLLDT--ELPN------EIPSNDYIKYFKPDYT-LKTN----HGLNLDNLNTKAYLSAIKMQVLENLRHIQHAPGVQMHEVPPD-TYFPD---FDE--------E-DFNPDERLDQH---------------------------TQDKSVQRDE---EFYDGDND------NDHDMDSE----------------------------VKKTLLVNFETADNSPGAAAELFCKTAVVVSKGQQSPTGDNLPLRQYSIQYQPSPSPLTSQASPITSPPPESASSIPLSQVDTESAASLSWKDVTVVLDGVAGYAEPYRMLTIMGPSQSGKSTLLRALSGRLCRKAKYQGDIRINGRRQQLTYGTSTFLTPDDEVLPDSLTVKEHLILSAFLRLPSNLPRKEKLAVAEHVMSEMGLTELAYRYVRKCPHKGISGGERRLVNLAVELLIGPSLIYFDDAFKGLEGASVLSLLIKLKGLARGGATVIMCTEHVSSQVYELLDDLCLLSNGKMVFFGDNIAAVEHFSTAGFPCPPNHNPSDHFLYTIGAEFEKLRAPFLYVQ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [815]
lcl|Smo_HDA9_30_3_unnamed_protein_product                                    -----------------------------------------------------------------------------------------------------------------------------------------MPPAKDRV-----------------------------------------------------------------------------------------------------SYFYDGKRVTQLSRLTDFARFLPGDVGSVYYGPNHPMKPHRLCMTHSLVLAYGLH--HKMEIY-------------------------RPRKAYPAELAQFHSTDYIDFLHRITPEMQDQYAKELLMYNMGE--DCPVFDNLFEFCQIYAGGTIDAAHRLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDLVLGILELLKYFPRVLYIDI-------DIHH--GDGVEEAFYLTDSFATCSRLHRFRVMTVSFHKF-GDYFFPGTGDVK------------------DVGEREGKYYAVNVPLKDGIDDSSFIRLFRV-VISKVV----------EFYQPGA--------VVLQCG-----ADSLAGDRLGCF-------------------NLSIQGFISQLQSYICLRILTGHAECVNFVKKLGIPLLV-TGGGGYTKENVARCWTVETGVLLDT--ELPN------EIPSNDYIKYFKPDYT-LKTN----HGLNLDNLNTKAYLSAIKMQVLENLRHIQHAPGVQMHEVPPD-TYFPD---FDE--------G-DFNPDERLDQH---------------------------TQDKSVQRDE---EFYDGDND------NDHDMDSE----------------------------AA-------ENWSNRFSAQATGF--------KMAQSPTGDNLPLRQYSIQYQPSPSPLTSQASPITSPPPESASSIPLSQVDTESAASLSWKDVTVVLDGVAGYAEPYRMLTIMGPSQSGKSTLLRALSGRLCRKAKYQGDIRINGRRQQLTYGTSTFLTPDDEVLPDSLTVKEHLILSAFLRLPSNLPRKEKLAVAEHVMSEMGLTELAYRYVRKCPHKGISGGERRLVNLAVELLIGPSLIYFDDAFKGLEGASVLSLLIKLKGLARGGATVIMCTEHVSSQVYELLDDLCLLSNGKMVFFGDNIAAVEHFSTAGFPCPPNHNPSDHFLYTIGAEFEKLRAPFLYVQACINQSVQDAEKAEAFAKEDHHQIVNFLSASYQGSDFNAALVSKARAACIFLALEGMMFLSVGGVPYMYNEVKMHVREMVNCHYGVANFVVANSIASLPFLLLISLVPLCSMYFLAGLHSGALKFIYFVVNLYLSLIVSESLMMAISCIVPNAYTGMIIGSCVQVLFMLVGGYVRHDNNLPKAFWKYPSSYISFHAHSLRGMFQNEFLGSRYGGHTGAYIVYGEYNFPASPGKWWSLLILAGMAIFYRTLSVVLIRLSYRVRSLTRTCIATGKT   [1085]
'gi|66828287|ref|XP 647498.1| hypothetical protein DDB0189724 [Dictyostelium discoideum] >gi|60475530|gb|EAL73465.1| hypothetica'    ------------------------------------------------------------------------------------------------------------------------------------------M-STRKV-----------------------------------------------------------------------------------------------------SYFYD------------------NEVGNHYYGPNHPMKPHRMRMTHDLVLNYGIY--KKMQIF-------------------------RPRKASELELTNFHSDDYINFLKLVTPDNMHDYSKQLVKFNVRE--DCPVFDGMYNFCQISSGGSIGCAVKVNSKESDVAINWAGGLHHAKKSEASGFCYTNDIVLSILELLKHHERVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GDY-FPGTGDVK------------------DIGADKGKYYSLNFPLKDGIDDESYQSIFRP-IIRSVM----------DFYRPGA--------VVIQCG-----ADSLTGDRLGCF-------------------NLTLR----------------GHAQCIEFLKSFNVPLVV-LGGGGYTIKNVARCWTYETSILVDS--ELKD------ELPYNDYLEYYGPEYR-LHIT----P-NNMENQNTKDYLEKLKIQLLENLRNLNHAPAAAHHDIPPD-SFNYS---DDE--------D-DEDPDVRISEA---------------------------DRDKKVHHQG---ELSDSDEE--------DGRRNY-------------------------------------------------------------SNGLEATSTSRRNQVSISAYDKERPSYNSRNN------------------------------------------------------NNNNNNNNNNNNNNNNNSNNNNSHHHNEDADVDMDSG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [495]
'gi|60688073|gb|AAH90604.1| Hdac1 predicted-prov protein [Xenopus tropicalis] >gi|71896231|ref|NP 001025564.1| hdac1 predicted-p'    --------------------------------------------------------------------------------------------------------------------------------MAL--SQ---G-TKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDVGNYYYGQGHPIKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKASAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASSVKLNKQQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMSKVM----------EMYQPSA--------VVLQCG-----ADSLSGDRLGCF-------------------NLTIK----------------GHAKCVEFIKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALDS--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-SVHDD--SGEE--------D-EEDPDKRISIR---------------------------SSDKRIACDE---EFSDSEDE------GEGGRRNV-----ASFKK-----------------------------------VKR-----------------VKTEEEKDGE------------------------------------------------------------------------EKKD--VKEEEKPK----------------D---E----KTDSKR------VKEET-------KSA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [480]
'gi|3023928|sp|O42227|HDA1B XENLA Probable histone deacetylase 1-B (HD1) (RPD3 homolog) >gi|2444430|gb|AAC60346.1| deacetylase ['    --------------------------------------------------------------------------------------------------------------------------------MAL--SQ---G-TKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKASAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVVYIDI-------DIHH--GDGVEEAFYTTD-----------RVMSVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMTKVM----------EMFQPSA--------VVLQCG-----ADSLSGDRLGCF-------------------NLTIK----------------GHAKCVEFIKTFNLPMLM-LGGGGYTIRNVARCWTYETAVALDS--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-SVHDD--SGEE--------D-EEDPDKRISIR---------------------------SSDKRIACDE---EFSDSEDE------GEGGRKNV-----ANFKK-----------------------------------VKR-----------------VKTEEEKEGE------------------------------------------------------------------------DKKD--VKEEEKAK----------------D---E----KTDSKR------VKEET-------KSV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [480]
'gi|27735466|gb|AAH41296.1| MGC53583 protein [Xenopus laevis]'                                    --------------------------------------------------------------------------------------------------------------------------------MAL--SQ---G-TKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKASAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVVYIDI-------DIHH--GDGVEEAFYTTD-----------RVMSVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMTKVM----------EMFQPSA--------VVLQCG-----ADSLSGDRLGCF-------------------NLTIK----------------GHAKCVEFIKTFNLPMLM-LGGGGYTIRNVARCWTYETAVALDS--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-SVHDD--SGEE--------D-EEDPDKRISIR---------------------------SSDKRIACDE---EFSDSEDE------GEGGRRNM-----ASFKK-----------------------------------LKR-----------------VKTEEEKEAD------------------------------------------------------------------------DKKD--VKEEEKLK----------------D---D----KTDSKR------VKEET-------KSA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [480]
'gi|2347180|gb|AAB68398.1| putative histone deacetylase [Mus musculus]'                                    --------------------------------------------------------------------------------------------------------------------------------MAQ--TQ---G-TKRKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDVGNYYYGQGHPM?PHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMSKVM----------EMFQPSA--------VVLQCG-----SDSLSGDRLGCF-------------------NLTIK----------------GHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCWTYETAVALDT--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AIPEE--SGDE--------D-EEDPDKRISIC---------------------------SSDKRIACEE---EFSDSDEE------GEGGRKNS-----SNFKK-----------------------------------AKR-----------------VKTEDEKEKDPE----------------------------------------------------------------------EKKE--VTEEEKTK----------------E---E----KPEAKG------VKEEV-------KLA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [482]
'gi|82994453|ref|XP 930837.1| PREDICTED: skip [Mus musculus]'                                    --------------------------------------------------------------------------------------------------------------------------------MAQ--TQ---G-TKRKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNYPLRDGIDDESYEATFKP-VMSKVM----------EMFQPSA--------VVLQCG-----SDSLSGDRLGCF-------------------NLTIK----------------GHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCWTYETAVALDT--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AIPEE--SGDE--------D-EEDPDKRISIC---------------------------SSDKRIACEE---EFSDSDEE------GEGGRKNS-----SNFKK-----------------------------------AKR-----------------VKTEDEKEKDPE----------------------------------------------------------------------EKKE--VTEEEKTK----------------E---E----KPEAKG------VKEEV-------KLA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [482]
'gi|55630864|ref|XP 519834.1| PREDICTED: similar to histone deacetylase 1; reduced potassium dependency, yeast homolog-like 1 [P'    --------------------------------------------------------------------------------------------------------------------------------MAQ--TQ---G-TRRKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMSKVM----------EMFQPSA--------VVLQCG-----SDSLSGDRLGCF-------------------NLTIK----------------GHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCWTYETAVALDT--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AIPEE--SGDE--------D-EEDPDKRISIC---------------------------SSDKRIACEE---EFSDSEEE------GEGGRKNS-----SNFKK-----------------------------------AKR-----------------VKTEDEKEKDPE----------------------------------------------------------------------EKKE--VTEEEKTK----------------E---E----KPEAKG------VKEEV-------KLA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [482]
'gi|81294220|gb|AAI08089.1| Histone deacetylase 1 [Bos taurus] >gi|82697313|ref|NP 001032521.1| histone deacetylase 1 [Bos tauru'    --------------------------------------------------------------------------------------------------------------------------------MAQ--TQ---G-TKRKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMSKVM----------EMFQPSA--------VVLQCG-----SDSLSGDRLGCF-------------------NLTIK----------------GHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCWTYETAVALDT--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AIPEE--SGDE--------D-EEDPDKRISIC---------------------------SSDKRIACEE---EFSDSDEE------GEGGRKNS-----SNFKK-----------------------------------AKR-----------------VKTEDEKEKDPE----------------------------------------------------------------------EKKE--VTEEEKTK----------------E---E----KQEAKG------VKEEV-------KLA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [482]
'gi|6680193|ref|NP 032254.1| histone deacetylase 1 [Mus musculus] >gi|1771286|emb|CAA66870.1| histone deacetylase [Mus musculus]'    --------------------------------------------------------------------------------------------------------------------------------MAQ--TQ---G-TKRKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMSKVM----------EMFQPSA--------VVLQCG-----SDSLSGDRLGCF-------------------NLTIK----------------GHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCWTYETAVALDT--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AIPEE--SGDE--------D-EEDPDKRISIC---------------------------SSDKRIACEE---EFSDSDEE------GEGGRKNS-----SNFKK-----------------------------------AKR-----------------VKTEDEKEKDPE----------------------------------------------------------------------EKKE--VTEEEKTK----------------E---E----KPEAKG------VKEEV-------KLA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [482]
'gi|67678279|gb|AAH97943.1| Histone deacetylase 1 [Rattus norvegicus] >gi|70794768|ref|NP 001020580.1| histone deacetylase 1 [Ra'    --------------------------------------------------------------------------------------------------------------------------------MAQ--TQ---G-TKRKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMSKVM----------EMFQPSA--------VVLQCG-----SDSLSGDRLGCF-------------------NLTIK----------------GHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCWTYETAVALDT--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AIPEE--SGDE--------D-EEDPDKRISIC---------------------------SSDKRIACEE---EFSDSDEE------GEGGRKNS-----SNFKK-----------------------------------AKR-----------------VKTEDEKEKDPE----------------------------------------------------------------------EKKE--VTEEEKTK----------------E---E----KPEAKG------VKEEV-------KMA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [482]
'gi|73949987|ref|XP 864700.1| PREDICTED: similar to Histone deacetylase 1 (HD1) isoform 4 [Canis familiaris]'                        ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSKVM----------EMFQPSA--------VVLQCG-----SDSLSGDRLGCF-------------------NLTIK----------------GHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCWTYETAVALDT--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQVIPED-AIPEE--SGDE--------D-EEDPDKRISIC---------------------------SSDKRIACEE---EFSDSDEE------GEGGRKNS-----SNFKK-----------------------------------AKR-----------------VKTEDEKEKDPE----------------------------------------------------------------------EKKE--VTEEEKTK----------------E---E----KQEAKG------VKEEV-------KLA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [238]
'gi|73949989|ref|XP 864716.1| PREDICTED: similar to histone deacetylase 1 isoform 5 [Canis familiaris]'                              --------------------------------------------------------------------------------------------------------------------------------MAQ--TQ---G-TRRKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQR---------------------------SSAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMSKVM----------EMFQPSA--------VVLQCG-----SDSLSGDRLGCF-------------------NLTIK----------------GHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCWTYETAVALDT--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQVIPED-AIPEE--SGDE--------D-EEDPDKRISIC---------------------------SSDKRIACEE---EFSDSDEE------GEGGRKNS-----SNFKK-----------------------------------AKR-----------------VKTEDEKEKDPE----------------------------------------------------------------------EKKE--VTEEEKTK----------------E---E----KQEAKG------VKEEV-------KLA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [457]
'gi|73949981|ref|XP 544435.2| PREDICTED: similar to histone deacetylase 1 isoform 1 [Canis familiaris]'                              --------------------------------------------------------------------------------------------------------------------------------MAQ--TQ---G-TRRKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMSKVM----------EMFQPSA--------VVLQCG-----SDSLSGDRLGCF-------------------NLTIK----------------GHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCWTYETAVALDT--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQVIPED-AIPEE--SGDE--------D-EEDPDKRISIC---------------------------SSDKRIACEE---EFSDSDEE------GEGGRKNS-----SNFKK-----------------------------------AKR-----------------VKTEDEKEKDPE----------------------------------------------------------------------EKKE--VTEEEKTK----------------E---E----KQEAKG------VKEEV-------KLA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [482]
'gi|2827430|gb|AAB99850.1| histone deacetylase 1 [Gallus gallus]'                                    --------------------------------------------------------------------------------------------------------------------------------MAV--MQ---G-TKRKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VISKVM----------ETFQPSA--------VVLQCG-----SDSLSGDRLGCF-------------------NLTIK----------------GHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCWTYETAVALDT--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQPIPED-AVQED--SGDE--------E-EEDPEKRISIR---------------------------NSDKRISCDE---EFSDSEDE------GEGGRKNV-----ANFKK-----------------------------------AKR-----------------VKTEEEKEEE------------------------------------------------------------------------EKKD--EKEEEKAK----------------E---E----KAEPKG------VKEET-------KST------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [480]
'gi|2829214|gb|AAC00504.1| erythrocyte histone deacetylase [Gallus gallus] >gi|2791684|gb|AAB96923.1| histone deacetylase-1; HD-'    --------------------------------------------------------------------------------------------------------------------------------MAL--TQ---G-TKRKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VISKVM----------ETFQPSA--------VVLQCG-----SDSLSGDRLGCF-------------------NLTIK----------------GHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCWTYETAVALDT--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQPIPED-AVQED--SGDE--------E-EEDPEKRISIR---------------------------NSDKRISCDE---EFSDSEDE------GEGGRKNV-----ANFKK-----------------------------------AKR-----------------VKTEEEKEEE------------------------------------------------------------------------EKKD--EKEEEKAK----------------E---E----KAEPKG------VKEET-------KST------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [480]
'gi|19070647|gb|AAL83942.1| putative histone deacetylase [Physarum polycephalum]'                                    ----------------------------------------------------------------------------------------------------------------------------------------MAS-NKPKV-----------------------------------------------------------------------------------------------------AYFYD------------------ADVGNYYYGQGHPMKPHRIRMTHNLLLNYGPY--KKMQIY-------------------------RPRRATELDMTKFHSDDYIQFLRLVSPDNMNEYAKQLQRFNVVE--DCPIFEGMFNFFQISAGGSVGGAVKLNNNDANVAMNWAGGLHQAKKSEASGFCYVNDIVLAILELLKHHQRILYIDV-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKF-GDY-FPGTGDIR------------------DVGAGKGKYYAVNFPLKDGIDDESYQSVFKP-IIQAVI----------EFYRPGA--------IVFQSG-----AHSLSGDRLGGF-------------------NLSIR----------------GHAECLTFLKQFNLPLLV-LGGGGYTIRNVARCWAYDTGVVLDT--ELDD------ELPYNDYLEYFGPDYR-LHYT----P-NNMENQNGREYLEKCKNKILENLRHLQNAPGVAMHEVPPD-AMDDS---DDS--------D-DDDPDSRQNQR---------------------------DLDRRVSHED---NLSDSDEE--------DGRRNM-----EDEPN----------------------------------------------GGYSSSNSHRASRRKRTGKISIMAGDKERAPMSRNARSVIPPPHSPISTHGSTLIPPHSPVPPPVDDDDMVDAEEAEVDIQGDSGEVPFSTNNNNNNTNNNGNSNNNNNNNNNINTNNNDNNMTSNATTTTSTTNADNNSNNSTKS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [579]
'gi|30583783|gb|AAP36140.1| Homo sapiens histone deacetylase 1 [synthetic construct] >gi|61369536|gb|AAX43347.1| histone deacety'    --------------------------------------------------------------------------------------------------------------------------------MAQ--TQ---G-TRRKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMSKVM----------EMFQPSA--------VVLQCG-----SDSLSGDRLGCF-------------------NLTIK----------------GHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCWTYETAVALDT--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AIPEE--SGDE--------D-EDDPDKRISIC---------------------------SSDKRIACEE---EFSDSEEE------GEGGRKNS-----SNFKK-----------------------------------AKR-----------------VKTEDEKEKDPE----------------------------------------------------------------------EKKE--VTEEEKTK----------------E---E----KPEAKG------VKEEV-------KLAL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [483]
'gi|12653071|gb|AAH00301.1| Histone deacetylase 1 [Homo sapiens] >gi|48479080|gb|AAT44863.1| histone deacetylase 1 [Homo sapiens'    --------------------------------------------------------------------------------------------------------------------------------MAQ--TQ---G-TRRKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMSKVM----------EMFQPSA--------VVLQCG-----SDSLSGDRLGCF-------------------NLTIK----------------GHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCWTYETAVALDT--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AIPEE--SGDE--------D-EDDPDKRISIC---------------------------SSDKRIACEE---EFSDSEEE------GEGGRKNS-----SNFKK-----------------------------------AKR-----------------VKTEDEKEKDPE----------------------------------------------------------------------EKKE--VTEEEKTK----------------E---E----KPEAKG------VKEEV-------KLA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [482]
'gi|51704120|gb|AAH81136.1| AB21 protein [Xenopus laevis] >gi|602098|emb|CAA55211.1| yeast RPD3 homologue [Xenopus laevis] >gi|3'    --------------------------------------------------------------------------------------------------------------------------------MAL--TL---G-TKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIF-------------------------RPHKASAEDMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVVYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNYALRDGIDDESYEAIFKP-VMSKVM----------EMFQPSA--------VVLQCG-----ADSLSGDRLGCF-------------------NLTIK----------------GHAKCVEFIKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALDS--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAVAED-SIHDD--SGEE--------D-EDDPDKRISIR---------------------------SSDKRIACDE---EFSDSEDE------GEGGRKNV-----ANFKK-----------------------------------VKR-----------------VKTEEEKEGE------------------------------------------------------------------------DKKD--VKEEEKAK----------------D---E----KTDSKR------VKEET-------KSV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [480]
'gi|27545221|ref|NP 775343.1| histone deacetylase 1 [Danio rerio] >gi|21105403|gb|AAM34645.1| histone deaceytlase 1 [Danio rerio'    --------------------------------------------------------------------------------------------------------------------------------MAL-SSQ---G-TKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-IMSKVM----------EMYQPSA--------VVLQCG-----ADSLSGDRLGCF-------------------NLTIK----------------GHAKCVEYMKSFNLPLLM-LGGGGYTIKNVARCWTFETAVALDS--TIPN------ELPYNDYFEYFGPDFK-LHIS----P-FNMTNQNTNDYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AVQED--SGDE----------EDDPDKRISIR---------------------------AHDKRIACDE---EFSDSEDE------GQGGRRNA-----ANYKK-----------------------------------PKR-----------------VKTEEEKDGE------------------------------------------------------------------------EKKD--VKEEEKAS----------------E---E----KMDTKG------PKEEL-------KTV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [480]
'gi|66826729|ref|XP 646719.1| hypothetical protein DDB0190980 [Dictyostelium discoideum] >gi|60474582|gb|EAL72519.1| hypothetica'    ------------------------------------------------------------------------------------------------------------------------------MEYNTILNN---T-SKTRV-----------------------------------------------------------------------------------------------------CYFFD------------------QDVGNYFYGPYHPMKPHRLCLTNNLVLNYGLH--KKMHLY-------------------------KARPADAEDMLKFHSEDYVDFLERVTPENINEW-KDVKRFHIGE--DCPVFPGLYDYCSIYSGGSIEGALKLNHRMYDIAINWSGGLHHARKDEASGFCYVNDIVLAILELLKFHARVLYIDI-------DVHH--GDGVQEAFYLTD-----------RVMTVSFHKFGGDF-FPGTGDID------------------EIGAKTGKLYSVNVPLADGIDDKNYLNIFKP-VIQGVM----------DYYRPSV--------IVLQCG-----ADSLRFDRLGCF-------------------NLTIK----------------GHAECVRFVKSFNIPTLV-LGGGGYTVRNVARCWTYETSVCVDT--EVNN------ELPYNDYIQFYSPDFQ-LIPDYTGLP-FKYENANTKSYLESLRIKILENLRILQWAPSVQIQDVPPD-IMPID---FDR------DEDSKENMDKRKKKH------------------------------------N---DFS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [422]
'gi|74185170|dbj|BAE22585.1| unnamed protein product [Mus musculus]'                                    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM----------EMYQPSA--------VVLQCG-----ADSLSGDRLGCF-------------------NLTVK----------------GHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALDC--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHED--SGDE--------D-GEDPDKRISIR---------------------------ASDKRIACDE---EFSDSEDE------GEGGRRNV-----ADHKK----------------------------------GAKK-----------------ARI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [285]
'gi|47219554|emb|CAG09908.1| unnamed protein product [Tetraodon nigroviridis]'                                    --------------------------------------------------------------------------------------------------------------------------------MAL-TSQ---G-TKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKANGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSVGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-ARARLLLSV-------TEVVPRADNGQGDGDVPAQCGGSPVRSDSLSGDRLGCF-------------------NLTIK----------------GHAKCVEYMKSFNLPLLM-LGGGGYTIRNVARCWTYETAVALDA--SIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTNDYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AVQED--SGDE--------E-EEDPNKRISIR---------------------------AHDKRIACEE---EFSDSEDE------GEGGRRNS-----ASFKK-----------------------------------AKR-----------------AKTEGDKEGEEK----------------------------------------------------------------------EKKE--VKEEEKVP----------------E---E----E--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [486]
'gi|55627246|ref|XP 518700.1| PREDICTED: similar to transcriptional regulator homolog RPD3 [Pan troglodytes]'                        -----------------------------------MRPPPRGLRRWFGGPLLASWCRCHLRFRAFGTSAGWYRIFPAPPPLLPPACPSPRDYRPHVSLSPFLSRPSRGGSSSSSSRRRSPEAAVAGEPMAY-SQG---G-GKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYFEREICRGTYEFGRSQYIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM----------EMYQPSA--------VVLQCG-----ADSLSGDRLGCF-------------------NLTVK----------------GHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALDC--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHED--SGDE--------D-GEDPDKRISIR---------------------------ASDKRIACDE---EFSDSEDE------GEGGRRNEKPLSLKDFLK-----------------------------------EKRFFFFFGVSLLGEGVAPSSALGEDVEEAADAASPSAAVAPPWRPTRRPRAKRRRLPSRRIYLSVRFGRRRGHSRLPRPLRGGFSLRCGLGELGTHAGFFNKETQ--QIQEGKQRASGWCNDWASSSSGGGGNSGS----GTHTGGRGVGVVERTEQNRLNTLRIKKF-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [708]
'gi|45382275|ref|NP 990162.1| histone deacetylase 2 [Gallus gallus] >gi|2791686|gb|AAB96924.1| histone deacetylase-2; HD-2 [Gall'    --------------------------------------------------------------------------------------------------------------------------------MAY-SQG---G-GKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSEVSM-VNN-FPGTGDLR------------------DIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM----------EMYQPSA--------VVLQCG-----ADSLSGDRLGCF-------------------NLTVK----------------GHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALDC--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHED--SGDE--------D-GEDPDKRISIR---------------------------ASDKRIACDE---EFSDSEDE------GEGGRRNV-----ADHKK----------------------------------GAKK-----------------ARIEEDKKETED----------------------------------------------------------------------KKAD--VKEEDKSK----------------DNSGE----KTDTKG------AKSEQ-------LSNP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [488]
'gi|73974025|ref|XP 532270.2| PREDICTED: similar to Histone deacetylase 2 (HD2) [Canis familiaris]'                                  --------------------------------------------------------------------------------------------------------------------------------MPT-------------V-----------------------------------------------------------------------------------------------------KYFWDA-----------------SDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM----------EMYQPSA--------VVLQCG-----ADSLSGDRLGCF-------------------NLTVK----------------GHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALDC--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHED--SGDE--------D-GEDPDKRISIR---------------------------ASDKRIACDE---EFSDSEDE------GEGGRRNV-----ADHKK----------------------------------GAKK-----------------ARIEEDKKETED----------------------------------------------------------------------KKAD--VKEEDKSK----------------DSSGE----KTDTKG------AKSEQ-------LSNP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [481]
'gi|4557641|ref|NP 001518.1| histone deacetylase 2 [Homo sapiens] >gi|1667394|gb|AAC50814.1| transcriptional regulator homolog R'    --------------------------------------------------------------------------------------------------------------------------------MAY-SQG---G-GKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMHIFNVGE--DCPAFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKYEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNFPMCDGIDDESYGQIFKP-IISKVM----------EMYQPSA--------VVLQCG-----ADSLSGDRLGCF-------------------NLTVK----------------GHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALDC--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHED--SGDE--------D-GEDPDKRISIR---------------------------ASDKRIACDE---EFSDSEDE------GEGGRRNV-----ADHKK----------------------------------GAKK-----------------ARIEEDKKETED----------------------------------------------------------------------KKTD--VKEEDKSK----------------DNSGE----KTDTKG------TKSEQ-------LSNP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [488]
'gi|62666128|ref|XP 342150.2| PREDICTED: histone deacetylase 2 [Rattus norvegicus]'                                    MVISYHKLSRNKPSSLFPDIFKSGSGDLCFPLRAAAVVPPNSQPRRPEAYPCRVSRVGAAANPALRSRALPAPARRPAPGCPCCEGRRARRLPQPSCLAAGPRRARAAGGGAAARRRRP-------EPMAY-SQG---G-GKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAVLELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM----------EMYQPSA--------VVLQCG-----ADSLSGDRLGCF-------------------NLTVK----------------GHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALDC--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHED--SGDE--------D-GEDPDKRISIR---------------------------ASDKRIACDE---EFSDSEDE------GEGGRRNV-----ADHKK----------------------------------GAKK-----------------ARIEEDKKEAED----------------------------------------------------------------------KRTD--VKEEDKSK----------------DNSGE----KTDTKG------AKSEQ-------LNNP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [609]
'gi|87162464|ref|NP 032255.2| histone deacetylase 2 [Mus musculus]'                                    --------------------------------------------------------------------------------------------------------------------------------MAY-SQG---G-GKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM----------EMYQPSA--------VVLQCG-----ADSLSGDRLGCF-------------------NLTVK----------------GHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALDC--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHED--SGDE--------D-GEDPDKRISIR---------------------------ASDKRIACDE---EFSDSEDE------GEGGRRNV-----ADHKK----------------------------------GAKK-----------------ARIEEDKKETED----------------------------------------------------------------------KKTD--VKEEDKSK----------------DNSGE----KTDPKG------AKSEQ-------LSNP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [488]
'gi|55961192|emb|CAI15363.1| HDAC2 [Homo sapiens] >gi|55960368|emb|CAI14207.1| HDAC2 [Homo sapiens] >gi|68068066|sp|Q92769|HDAC2'    --------------------------------------------------------------------------------------------------------------------------------MAY-SQG---G-GKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM----------EMYQPSA--------VVLQCG-----ADSLSGDRLGCF-------------------NLTVK----------------GHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALDC--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHED--SGDE--------D-GEDPDKRISIR---------------------------ASDKRIACDE---EFSDSEDE------GEGGRRNV-----ADHKK----------------------------------GAKK-----------------ARIEEDKKETED----------------------------------------------------------------------KKTD--VKEEDKSK----------------DNSGE----KTDTKG------TKSEQ-------LSNP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [488]
'gi|55716026|gb|AAH85375.1| Histone deacetylase 1 [Danio rerio]'                                    --------------------------------------------------------------------------------------------------------------------------------MAL-SSQ---G-TKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSAGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-IMSKVM----------EMYQPSA--------VVLQCG-----ADSLSGDRLGCF-------------------NLTIK----------------GHAKCVEYMKSFNLPLLM-LGGGGYTIRNVARCWTFETAVALDS--TIPN------ELPYSDYFEYFGPDFK-LHIS----P-SNMTNQNTNDYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AVQED--SGDE----------EDDPDKRISIR---------------------------AHDKRIACDE---EFSDSEDE------GQGGRRNA-----ANYKK-----------------------------------PKR-----------------VKTEEEKDGE------------------------------------------------------------------------EKKD--VKEEEKAS----------------E---E----KMDTKG------PKEEL-------KTV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [480]
'gi|1665723|dbj|BAA08909.1| RPD3 protein [Homo sapiens] >gi|60819522|gb|AAX36503.1| histone deacetylase 1 [synthetic construct]'     --------------------------------------------------------------------------------------------------------------------------------MAQ--TQ---G-TRRKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMSKVM----------EMFQPSA--------VVLQCG-----SDSLSGDRLGCF-------------------NLTIK----------------GHAKCVEFVKSFNLPMLM-LGGGGYTIRNVARCRTYETAVALDT--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AIPEE--SGDE--------D-EDDPDKRISIC---------------------------SSDKRIACEE---EFSDSEEE------GEGGRKNS-----SNFKK-----------------------------------AKR-----------------VKTEDEKEKDPE----------------------------------------------------------------------EKKE--VTEEEKTK----------------E---E----KPEAKG------VKEEV-------KLA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [482]
'gi|60654411|gb|AAX29896.1| histone deacetylase 2 [synthetic construct]'                                    --------------------------------------------------------------------------------------------------------------------------------MAY-SQG---G-GKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM----------EMYQPSA--------VVLQCG-----ADSLSGDRLGCF-------------------NLTVK----------------GHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTHETAVALDC--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHED--SGDE--------D-GEDPDKRISIR---------------------------ASDKRIACDE---EFSDSEDE------GEGGRRNV-----ADHKK----------------------------------GAKK-----------------ARIEEDKKETED----------------------------------------------------------------------KKTD--VKEEDKSK----------------DNSGE----KTDTKG------TKSEQ-------LSNPL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [489]
'gi|71051977|gb|AAH31055.2| HDAC2 protein [Homo sapiens]'                                    F-----------------------------------------GGPLLASWCRCHLRFRAFGTSAGWYRAFPAPPPLLPPACPSPRDYR----PHVSLSHFLSRPSRGGSSSSSSSRRRSPVAAVAGEPMAY-SQG---G-GKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM----------EMYQPSA--------VVLQCG-----ADSLSGDRLGCF-------------------NLTVK----------------GHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTHETAVALDC--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHED--SGDE--------D-GEDPDKRISIR---------------------------ASDKRIACDE---EFSDSEDE------GEGGRRNV-----ADHKK----------------------------------GAKK-----------------ARIEEDKKETED----------------------------------------------------------------------KKTD--VKEEDKSK----------------DNSGE----KTDTKG------TKSEQ-------LSNP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [571]
'gi|3023934|sp|P70288|HDAC2 MOUSE Histone deacetylase 2 (HD2) (YY1 transcription factor-binding protein) >gi|1667396|gb|AAC52889'    --------------------------------------------------------------------------------------------------------------------------------MAY-SQG---G-GKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM----------EMYQPSA--------VVLQCG-----ADSLSGDRLGCF-------------------NLTVK----------------GHAKCVEVAKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALDC--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHED--SGDE--------D-GEDPDKRISIR---------------------------ASDKRIACDE---EFSDSEDE------GEGGRRNV-----ADHKK----------------------------------GAKK-----------------ARIEEDKKETED----------------------------------------------------------------------KKTD--VKEEDKSK----------------DNSGE----KTDPKG------AKSEQ-------LSNP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [488]
'gi|89268122|emb|CAJ81536.1| histone deacetylase 2 [Xenopus tropicalis]'                                    --------------------------------------------------------------------------------------------------------------------------------MAY-TQG---G-AKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM----------EMYQPSA--------VVLQCG-----ADSLSGDRLGCF-------------------NLTVK----------------GHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALDC--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVQED--SGDE--------E-GEDPDKRISIR---------------------------ASDKRIACDE---EFSDSEDE------GEGGRRNV-----ADHKK----------------------------------GAKK-----------------ARLEEDKKETDD----------------------------------------------------------------------KKSD--VKEEDKSK----------------DNIAE----KMDTKG------VKSEQ-------PSNP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [488]
'gi|49257716|gb|AAH74509.1| Histone deacetylase 1 [Xenopus tropicalis] >gi|53749670|ref|NP 001005432.1| histone deacetylase 1 [X'    --------------------------------------------------------------------------------------------------------------------------------MAY-TQG---G-AKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM----------EMYQPSA--------VVLQCG-----ADSLSGDRLGCF-------------------NLTVK----------------GHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALDC--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVQED--SGDE--------E-GEDPDKRISIR---------------------------ASDKRIACDE---EFSDSEDE------GEGGRRNV-----ADHKK----------------------------------GAKK-----------------ARLEEEKKETDD----------------------------------------------------------------------KKSD--VKEEDKSK----------------DNIAE----KMDTKG------VKSEQ-------PSNP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [488]
'gi|32450592|gb|AAH54208.1| Hdac2 protein [Xenopus laevis]'                                    --------------------------------------------------------------------------------------------------------------------------------MAY-TQG---G-AKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM----------EMYQPSA--------VVLQCG-----PDSLSGDRLGCF-------------------NLTVK----------------GHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALDC--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVQED--SGDE--------E-GEDPDKRISIR---------------------------ASDKRIACDE---EFSDSEDE------GEGGRRNV-----ADHKK----------------------------------KKKK-----------------KKK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [447]
'gi|51703484|gb|AAH81054.1| Hdac2 protein [Xenopus laevis]'                                    --------------------------------------------------------------------------------------------------------------------------------MAY-TQG---G-AKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-IISKVM----------EMYQPSA--------VVLQCG-----ADSLSGDRLGCF-------------------NLTVK----------------GHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALDC--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVQED--SGDE--------E-GEDPDKRISIR---------------------------ASDKRIACDE---EFSDSEDE------GEGGRRNV-----ADHKK----------------------------------GAKK-----------------ARLEEDKKETDD----------------------------------------------------------------------KKSD--VKEEDKSK----------------DNIAE----KMDTKG------VKSEQ-------PINP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [488]
'gi|76668097|ref|XP 588868.2| PREDICTED: similar to Histone deacetylase 2 (HD2) isoform 1 [Bos taurus]'                              --------------------------------------------------------------------------------------------------------------------------------MAY-SQG---G-GKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-VI--------------ELFQ------------ILKDD-----AVKAERRRIDAF-------------------ELSVL----------------GHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALDC--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHED--SGDE--------D-GEDPDKRISIR---------------------------ASDKRIACDE---EFSDSEDE------GEGGRRNV-----TDHKK----------------------------------GAKK-----------------ARIEEDKKETED----------------------------------------------------------------------KKAD--VKEEDKSK----------------DNSGE----KTDTKG------AKSEQ-------LSNP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [480]
'gi|76668101|ref|XP 877730.1| PREDICTED: similar to Histone deacetylase 2 (HD2) isoform 6 [Bos taurus]'                              --------------------------------------------------------------------------------------------------------------------------------MAY-SQG---G-GKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-VISSVI----------EGFYPNK---------LWKIL-----KEMGIADHLTCL-----------------LRNLSVL----------------GHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALDC--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHED--SGDE--------D-GEDPDKRISIR---------------------------ASDKRIACDE---EFSDSEDE------GEGGRRNV-----TDHKK----------------------------------GAKK-----------------ARIEEDKKETED----------------------------------------------------------------------KKAD--VKEEDKSK----------------DNSGE----KTDTKG------AKSEQ-------LSNP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [489]
'gi|76668103|ref|XP 869380.1| PREDICTED: similar to Histone deacetylase 2 (HD2) isoform 2 [Bos taurus]'                              --------------------------------------------------------------------------------------------------------------------------------MAY-SQG---G-GKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNFPMRDGIDDESYGQIFKPGIFKKKL----------SLDDEAS--------LVAQCG-----GDGIPRRRIDAF-------------------ELSVL----------------GHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALDC--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHED--SGDE--------D-GEDPDKRISIR---------------------------ASDKRIACDE---EFSDSEDE------GEGGRRNV-----TDHKK----------------------------------GAKK-----------------ARIEEDKKETED----------------------------------------------------------------------KKAD--VKEEDKSK----------------DNSGE----KTDTKG------AKSEQ-------LSNP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [489]
'gi|12963260|gb|AAK11182.1| histone deacetylase 1 [Rattus norvegicus]'                                    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NYPLRDGIDDESYEAIFKP-VMSKVM----------EMFQPSA--------VVLQCG-----SDSLSGDRLGCF-------------------NLTIK----------------GHAKCVEFVKSFNLPMLM-LGGDGYTIHNVARCWTYETAVALDT--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTNEYLEKIKQRLFENLRMLPHTPGVQMQAIPED-AIPEE--SGDE--------D-EEDPDKPISIC---------------------------SSDKCIACEE---EFPDSDEE------GEGGRENS-----SNFKK-----------------------------------AKR-----------------VKTEDEKEKDPE----------------------------------------------------------------------EKKE--VTEEEKTK----------------E---E----KPEAKG------VKEEV-------K--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [256]
'gi|62655265|ref|XP 576595.1| PREDICTED: histone deacetylase 1 [Rattus norvegicus]'                                    --------------------------------------------------------------------------------------------------------------------------------MAQ--TQ---G-TERKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHYAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHHGDGDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-VMSKVM----------EMFQPSA--------VVLQCG-----SDSLSGDRLGCF-------------------NLTIK----------------GHAKCVEFVKSFNLPMLM-LGGDGYTIHNVARCWTYETAVALDT--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTNEYLEKIKQRLFENLRMLPHTPGVQMQAIPED-AIPEE--SGDE--------D-EEDPDKPISIC---------------------------SSDKCIACEE---EFPDSDEE------GEGGRENS-----SNFKK-----------------------------------AKR-----------------VKTEDEKEKDPE----------------------------------------------------------------------EKKE--VTEEEKTK----------------E---E----KPEAKG------VKEEV-------KMA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [484]
'gi|72026657|ref|XP 798972.1| PREDICTED: similar to histone deacetylase 1 [Strongylocentrotus purpuratus]'                           ------------------------------------------------------------------------------------------------------------------------------------------------M-----------------------------------------------------------------------------------------------------FFNFS------------------GDVGNYYYGQGHPMKPHRIRMTHNLILNYGLY--RKMEIY-------------------------RPHKAVMEEMTKYHSDDYVKFLRTIRPDNMSEYTKQMQRFNVGE--DCPVFDGLYEFCQLSSGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNFPLRDGIDDESYDKIFKP-IMCKVM----------EMYQPSA--------ICLQCG-----ADSLSGDRLGCF-------------------NLTLK----------------GHAKCVEFMKQYNLPLLL-MGGGGYTIRNVARCWTYETSTALGV--EIAN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTGEYLDKIKTRLYENMRMIPHAPGVQMQPIPED-AIPDD--SDAE--------DEAENPDKRISIM---------------------------AQDKRIQRDD---EFSDSEDEGETRLPGEGGRRDH-----RSHK------------------------------------AKR-----------------SKIDDSPGKEAD----------------------------------------------------------------------KGEQICSV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [458]
'gi|47551069|ref|NP 999711.1| histone deacetylase [Strongylocentrotus purpuratus] >gi|2654077|gb|AAB87685.1| histone deacetylase'    --------------------------------------------------------------------------------------------------------------------------------M---AST---G-TKKRV-----------------------------------------------------------------------------------------------------CYYYD------------------GDVGNYYYGQGHPMKPHRIRMTHNLILNYGLY--RKMEIY-------------------------RPHKAVMEEMTKYHSDDYVKFLRTIRPDNMSEYTKQMQRFNVGE--DCPVFDGLYEFCQLSSGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNFPLRDGIDDESYDKIFKP-IMCKVM----------EMYQPSA--------ICLQCG-----ADSLSGDRLGCF-------------------NLTLK----------------GHAKCVEFMKQYNLPLLL-MGGGGYTIRNVARCWTYETSTALGV--EIAN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTGEYLDKIKTRLYENMRMIPHAPGVQMQPIPED-AIPDD--SDAE--------DEAENPDKRISIM---------------------------AQDKRIQRDD---EFSDSEDEGETRLPGEGGRRDH-----RSHK------------------------------------AKR-----------------SKIDDSPGKEAD----------------------------------------------------------------------KEAK--SSDASKEA----------------KPAAEPQAVPMDTTP------APPPKKSEDKPEASKPTEVKAKPAEKEPGEGEASPADLVVPVPKVSAPSEGATLPAVTIPPSSGTSQPPADPPVSAPTPTPASAPAEKQD---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [576]
'gi|72106652|ref|XP 794761.1| PREDICTED: similar to histone deacetylase 3 [Strongylocentrotus purpuratus]'                           ------------------------------------------------------------------------------------------------------------------------------------------M-SNKTI-----------------------------------------------------------------------------------------------------AYFYD------------------ADVGNFHYGPGHPMKPHRLALTHNLVLNYGLY--KKMQIY-------------------------RPYRATAHDMCRFHSDDYIDFLQRVTPQNIQNFTKSLSHFNVGD--DCPVFPGLFDFCSMYTGASLEAATKLNNNLCDIAVNWAGGLHHAKKFEASGFCYVNDIVIAILEILKYHPRVLYIDI-------DIHH--GDGVQEAFYLTD-----------RVMTVSFHKY-GNHFFPGTGDMY------------------EVGLENGRYYSINVPLKDGIDDLMYSGLFKP-VIQSVM----------EFYRPSC--------IVLQCG-----ADSLGCDRLGCF-------------------SLSIK----------------GHGECVEYVKQFNVPLLV-MGGGGYTVRNVARCWTYETSLLLND--EISN------ELPYNDYFEYFAPDFT-LHPD----TTTRIENLNTKAYIDQVRQGVHDNLKCIAHAPSVQMHDVPPD-LLSLE----NI--------E-EPDPDVRNSTK---------------------------DQDERIEPAN---EFYDGDKD------QDKEDGVVLDV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [432]
'gi|66515540|ref|XP 394976.2| PREDICTED: similar to ENSANGP00000004321 [Apis mellifera]'                                    -------------------------------------------------------------------------------------------------------------------------------------MSALPHISRENI-------------------------------------------------------------------------------------LHVQRDCQNVFVISALNIYIL------------------GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATADEMTKFHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGE--DCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDI-------DVHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNIPLRDGMDDESYESIFVP-IISKVM----------ETFQPSA--------VVLQCG-----ADSLTGDRLGCF-------------------NLTVR----------------GHGKCVEFVKKYNLPFLM-VGGGGYTIRNVSRCWTYETSVALGS--EIAN------ELPYNDYFEYFGPDFK-LHIS----P-SNMANQNTPEYLEKIKTRLFENLRMLPHAPGVQVQSIPEDGAVIED--SEAE--------E-KVNPDERLPQR---------------------------DLDKRIQHEN---EYSDSEEE------GEGGRRDN-----RSFKG----------------------------------SRKR-----------------PRLEKGQEENEKD---------------------------------------------------------------------EKTN--ITNEETKK----------------DGGANP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [492]
'gi|62087960|dbj|BAD92427.1| histone deacetylase 2 variant [Homo sapiens]'                                    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTFALIIFLKF-----------------------------------------------------------------------------------------------------------------IFR---------------------------------TVAVC-------------RFCCY------------------PNLLVL----------------GHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALDC--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHED--SGDE--------D-GEDPDKRISIR---------------------------ASDKRIACDE---EFSDSEDE------GEGGRRNV-----ADHKK----------------------------------GAKK-----------------ARIEEDKKETED----------------------------------------------------------------------KKTD--VKEEDKSK----------------DNSGE----KTDTKG------TKSEQ-------LSNP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [238]
'gi|19526271|gb|AAL89665.1| histone deacetylase [Takifugu rubripes]'                                    --------------------------------------------------------------------------------------------------------------------------------MAL-TSQ---G-TKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKANGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSVGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNYPLRDGIDDESYEAIFKP-IMAKVM----------EMYQPSA--------VVLQCG-----ADSLSGDRLGCF-------------------NLTIK----------------GHAKCVEYMKSFNLPLLM-LGGGGYTIRNVARCWTYETAVALDA--SIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTNDYLEKIKQRLFENLRMLPHAPGVQMQAIPED-AVQED--SGDE--------E-AEDHNKRISIR---------------------------AHDKRIACEE---EFSDSEDE------GEGGRRNS-----VSFKK-----------------------------------AKR-----------------AKTEGEKEGEEK----------------------------------------------------------------------EKKE--VKEEEKVP----------------E---E----------------PKEES-------KTP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [477]
'gi|76668111|ref|XP 878224.1| PREDICTED: similar to Histone deacetylase 2 (HD2) isoform 10 [Bos taurus] >gi|76668107|ref|XP 8780'    --------------------------------------------------------------------------------------------------------------------------------MAY-SQG---G-GKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-VICIFLLSSSNPLPTSDEGKGNG--------NPLQYS-----CLGNPMDRGACF-------------------VYCVK----------------GHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALDC--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHED--SGDE--------D-GEDPDKRISIR---------------------------ASDKRIACDE---EFSDSEDE------GEGGRRNV-----TDHKK----------------------------------GAKK-----------------ARIEEDKKETED----------------------------------------------------------------------KKAD--VKEEDKSK----------------DNSGE----KTDTKG------AKSEQ-------LSNP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [498]
'gi|76668105|ref|XP 877933.1| PREDICTED: similar to Histone deacetylase 2 (HD2) isoform 7 [Bos taurus]'                              --------------------------------------------------------------------------------------------------------------------------------MAY-SQG---G-GKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-VISHFC-----GLNLDQNFSYEL--------MLLNCG-----AGEVCKYIVTQI--------------------FFVL----------------GHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALDC--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHED--SGDE--------D-GEDPDKRISIR---------------------------ASDKRIACDE---EFSDSEDE------GEGGRRNV-----TDHKK----------------------------------GAKK-----------------ARIEEDKKETED----------------------------------------------------------------------KKAD--VKEEDKSK----------------DNSGE----KTDTKG------AKSEQ-------LSNP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [492]
'gi|76668109|ref|XP 878124.1| PREDICTED: similar to Histone deacetylase 2 (HD2) isoform 9 [Bos taurus]'                              --------------------------------------------------------------------------------------------------------------------------------MAY-SQG---G-GKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGE--DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNFPMRDGIDDESYGQIFKP-VISSVI----------EGFYH------------LTCL-----LRNLYAAVTVCK--------------YIVTQIFFVL----------------GHAKCVEVVKTFNLPLLM-LGGGGYTIRNVARCWTYETAVALDC--EIPN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED-AVHED--SGDE--------D-GEDPDKRISIR---------------------------ASDKRIACDE---EFSDSEDE------GEGGRRNV-----TDHKK----------------------------------GAKK-----------------ARIEEDKKETED----------------------------------------------------------------------KKAD--VKEEDKSK----------------DNSGE----KTDTKG------AKSEQ-------LSNP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [489]
'gi|31324093|gb|AAP47171.1| histone deacetylase HDAC1 [Oryza sativa (japonica cultivar-group)] >gi|55296516|dbj|BAD68730.1| hist'    ----------------------------------------------------------------------------------------------------------------------MD-ASAGGGGNSLPTAG-ADG-AKRRV-----------------------------------------------------------------------------------------------------CYFYD------------------AEVGNYYYGQGHPMKPHRIRMTHALLAHYGLL--DQMQVL-------------------------KPHPARDRDLCRFHADDYVAFLRSVTPETQQDQIRALKRFNVGE--DCPVFDGLYSFCQTYAGGSVGGAVKLNHG-HDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKF-GDY-FPGTGDIR------------------DIGHSKGKYYSLNVPLDDGIDDESYQSLFKP-IMGKVM----------EVFRPGA--------VVLQCG-----ADSLSGDRLGCF-------------------NLSIR----------------GHAECVRFMRSFNVPLLL-LGGGGYTIRNVARCWCYETGVALGH--ELTD------KMPPNEYFEYFGPDYT-LHVA----P-SNMENKNTRQQLDDIRSRLLDNLSKLRHAPSVQFQERPPE-AELPE---QDE--------D-QEDPDERHHAD----------SDVEMDDVKPLDDSGRRSSIQNVRVKR---ESAETDAA------DQDGNRVA-----AENTKGTEPAADGVG---------------------------------------------SSKQTVPTDASAMAIDEPGSLKVEPDNSNKLQDQPSVHQKT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [518]
'gi|55296517|dbj|BAD68731.1| putative histone deacetylase HDAC1 [Oryza sativa (japonica cultivar-group)]'                            ----------------------------------------------------------------------------------------------------------------------MD-ASAGGGGNSLPTAG-ADG-AKRRV-----------------------------------------------------------------------------------------------------CYFYD------------------AEVGNYYYGQGHPMKPHRIRMTHALLAHYGLL--DQMQVL-------------------------KPHPARDRDLCRFHADDYVAFLRSVTPETQQDQIRALKRFNVGE--DCPVFDGLYSFCQTYAGGSVGGAVKLNHG-HDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKF-GDY-FPGTGDIR------------------DIGHSKGKYYSLNVPLDDGIDDESYQSLFKP-IMGKVM----------EVFRPGA--------VVLQCG-----ADSLSGDRLGCF-------------------NLSIR----------------GHAECVRFMRSFNVPLLL-LGGGGYTIRNVARCWCYETGVALGH--ELTD------KMPPNEYFEYFGPDYT-LHVA----P-SNMENKNTRQQLDDIRSRLLDNLSKLRHAPSVQFQERPPE-AELPE---QDE--------D-QEDPDERHHAD----------SDVEMDDVKPLDDSGRRSSIQNVRVKR---ESAETDAA------DQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VFFY   [460]
'gi|47213589|emb|CAF93492.1| unnamed protein product [Tetraodon nigroviridis]'                                    --------------------------------------------------------------------------------------------------------------------------------MAYTTAT---G-TKKKV-----------------------------------------------------------------------------------------------------CYYYD------------------GDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATAEEMTKYHSDDYIKFLRSIRPDNMSEFSKQMQRFNVGE--DCPVFDGLFEFCQLSAGGSAAGSVKLNRQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNFPLRDGIDDESYEHIFKP-VMAKVM----------EMYQPSA--------VVLQCG-----ADSLSGDRLGCF-------------------NLTIR----------------GHAKCVEYMKSFNLPLLM-LGGGGYTIRNVARCWTYETAVALDT--DIPD------ELPYNDYFEYFGPDFKAAHSV----H-RNMTNQNTQEYMDKIKQRLFENLRMLPHAPGVQMQAIPED-AVPDD--NVDE--------D-TEDPDKRLSIR---------------------------ATDKRIACDE---EFSDSEDE------GEGGRKNV-----ANHKK----------------------------------GAKR-----------------PRVDEDKKDGEE----------------------------------------------------------------------KKIE--IKEEENTK----------------DISAE----KTDSKS------VKTEQ-------TTSA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [490]
lcl|4198_Cre_unnamed_protein_product                                    ------------------------------------------------------------------------------------------------------------------------------------MTG---A-RKNKV-----------------------------------------------------------------------------------------------------AYFYD------------------REFQEFYFGQNHPMKPHRLAMTHHLVLGYGLH--KKMDVF-------------------------RPRRAHPAELAQFHTEDYIEFLSKVTPDSAAKFGNQLRQYNIND--DCPIFDNMFKFCQLYAGASIEGAVKLNHNLCDIAINWSGGLHHAKKGEASGFCYINDLVLAILELLKYHARVLYIDI-------DVHH--GDGVEEAFYLSD-----------RVMTVSFHKY-GDYFFPGTGDLM------------------DTGELNGKYYSVNVPLKDGTNDDTFHALFKP-IMRRVM----------EVFRPEA--------IVMQCG-----ADSLAHDRLGCF-------------------NMSLR----------------GHGEAIRFMKEFGLPMLI-TGGGGYTKHNVARCWTYETAILTDT--QVPE------QLPRSDYHEYFAPDFS-LNVS----AHKVMDDSNSKAEVQRILREVFENLRLLEHAPGVHMHQVPPD-FRVPR---YNY--------D-EEPLEERVGKY---------------------------AREHLIIRED---E------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [418]
'gi|50906299|ref|XP 464638.1| histone deacetylase HDAC3 [Oryza sativa (japonica cultivar-group)] >gi|31324097|gb|AAP47173.1| his'    ----------------------------------------------------------------------------------------------------------------------MDPSSAGAGGNSLASASCGDA-QKRRV-----------------------------------------------------------------------------------------------------CYFYD------------------PEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLAPAKMEVL-------------------------RPLPARGIDLCRFHSDDYVAFLRAVTPETQLGQVRALRRFNIGP--DCPVFDGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYIDI-------DIHH--GDGVEEAFYTTN-----------RVMTVSFHKF-GDY-FPGTGDIR------------------DIGYSEGKYYCLNVPLDDGIDDDSYQSIFKP-IISKVM----------EMYRPGA--------VVLQCG-----ADSLSGDRLGCF-------------------NLSGK----------------GHAECVKFMRSFNVPLLL-LGGGGYTIRNVARCWCYETGVALGE--ELQE------KLPYNEYYEYFGPEYS-LYVA----A-SNMENRNTNKQLEEIKCNILDNLSKLQHAPSVQFQERIPE-TKLPE---PDE--------D-QEDPDERHDPD----------SDMVLDDHKPTGHSA-RSLIHNIGVKR---EITETETK------DQHGKRLT-----TEH-KGPEPMAEDLG---------------------------------------------SSKQAPTADANAVAVNAPGNARNEPGSSPK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [510]
'gi|21299237|gb|EAA11382.1| ENSANGP00000004321 [Anopheles gambiae str. PEST] >gi|31217962|ref|XP 316539.1| ENSANGP00000004321 [A'    ------------------------------------------------------------------------------------------------------------------------------------MQS---H-SKKRV-----------------------------------------------------------------------------------------------------CYYYD------------------SDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATADEMTKFHSDDYIRFLRSIRPDNMSEYNKHMQRFNVGE--DCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDI-------DVHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGRGKYYAVNIPLRDGMDDESYDSIFVP-IISKVM----------ETFQPSA--------VVLQCG-----ADSLTGDRLGCF-------------------NLTVK----------------GHGKCVEFVKKYNLPFLM-VGGGGYTIRNVSRCWTYETSVALGV--EIAN------ELPYNDYFEYFGPDFK-LHIS----P-SNMSNQNTTEYLEKIKNRLFENLRMLPHAPGVQVQPIPED-AINDE--SEDE--------D-KVDKDERLPQQ---------------------------DKDKRIVPDN---EFSDSEDE------GEGGRRDN-----RSFKG--------------------------GQGAGQQQSRKR-----------------PRIEKDGK---------------------------------------------------------------------------AEE--VKDEKE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [466]
'gi|15233694|ref|NP 195526.1| HD1; histone deacetylase [Arabidopsis thaliana] >gi|31711912|gb|AAP68312.1| At4g38130 [Arabidopsis'    ----------------------------------------------------------------------------------------------------------------------MD-----TGGNSLA-SG-PDG-VKRKV-----------------------------------------------------------------------------------------------------CYFYD------------------PEVGNYYYGQGHPMKPHRIRMTHALLAHYGLL--QHMQVL-------------------------KPFPARDRDLCRFHADDYVSFLRSITPETQQDQIRQLKRFNVGE--DCPVFDGLYSFCQTYAGGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDI-------DIHH--GDGVEEAFYATD-----------RVMTVSFHKF-GDY-FPGTGHIQ------------------DIGYGSGKYYSLNVPLDDGIDDESYHLLFKP-IMGKVM----------EIFRPGA--------VVLQCG-----ADSLSGDRLGCF-------------------NLSIK----------------GHAECVKFMRSFNVPLLL-LGGGGYTIRNVARCWCYETGVALGV--EVED------KMPEHEYYEYFGPDYT-LHVA----P-SNMENKNSRQMLEEIRNDLLHNLSKLQHAPSVPFQERPPD-TETPE---VDE--------D-QEDGDKRWDPD----------SDMDVDD---------DRKPIPSRVKR---EAVEPDTK------DKDGLKGI-----MERGKGCEVEVDESG---------------------------------------------STKVTGVNPVGV----EEASVKMEEEGTNKGGAEQAFPPKT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [501]
'gi|11066139|gb|AAG28474.1| putative histone deacetylase [Arabidopsis thaliana] >gi|2318131|gb|AAB66486.1| histone deacetylase ['    ----------------------------------------------------------------------------------------------------------------------MD-----TGGNSLA-SG-PDG-VKRKV-----------------------------------------------------------------------------------------------------CYFYD------------------PEVGNYYYGQGHPMKPHRIRMTHALLAHYGLL--QHMQVL-------------------------KPFPARERDLCRFHADDYVSFLRSITPETQQDQIRQLKRFNVGE--DCPVFDGLYSFCQTYAGGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDI-------DIHH--GDGVEEAFYATD-----------RVMTVSFHKF-GDY-FPGTGHIQ------------------DIGYGSGKYYSLNVPLDDGIDDESYHLLFKP-IMGKVM----------EIFRPGA--------VVLQCG-----ADSLSGDRLGCF-------------------NLSIK----------------GHAECVKFMRSFNVPLLL-LGGGGYTIRNVARCWCYETGVALGV--EVED------KMPEHEYYEYFGPDYT-LHVA----P-SNMENKNSRQMLEEIRNDLLHNLSKLQHAPSVPFQERPPD-TETPE---VDE--------D-QEDGDKRWDPD----------SDMDVDD---------DRKPIPSRVKR---EAVEPDTK------DKDGLKGI-----MERGKGCEVEVDESG---------------------------------------------STKVTGVNPVGV----EEASVKMEEEGTNKGGAEQAFPPKT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [501]
'gi|50906309|ref|XP 464643.1| putative histone deacetylase HDAC3 [Oryza sativa (japonica cultivar-group)] >gi|49387955|dbj|BAD25'    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTVSFHKF-GDY-FPGTGDIR------------------DIGYSEGKYYCLNVPLDDGIDDDSYQSIFKP-IISKVM----------EMYRPGA--------VVLQCG-----ADSLSGDRLGCF-------------------NLSGK----------------GHAECVKFMRSFNVPLLL-LGGGGYTIRNVARCWCYETGVALGE--ELRE------KLPYNEYYEYFGPEYS-LYVA----A-SNMENRNTNKQLEEIKCNILDNLSKLQHAPSVQFEERIPE-TKLPE---PDE--------D-QDDPDERHDPD----------SDMLLDDHKPMGHSA-RSLIHNIGVKR---EITETETK------DQHGKRLT-----TEH-KVPEPMADDLG---------------------------------------------SSKQVPTADANSMAINAPGNAKNEPGSSL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [299]
'gi|50906305|ref|XP 464641.1| putative histone deacetylase HDAC3 [Oryza sativa (japonica cultivar-group)] >gi|49387953|dbj|BAD25'    ----------------------------------------------------------------------------------------------------------------------MDPSSAGAGGNSLASASCGDA-QKRRV-----------------------------------------------------------------------------------------------------CYFYD------------------PEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLAPAKMQVL-------------------------RPLPARDRDLCRFHSDDYVAFLRAVTPETQFDQIRSLRRFNVGE--DCPVFDGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYIDI-------DIHH--GDGVEEAFYTTN-----------RVMTVSFHKF-GDY-FPGTGDIR------------------DIGYSEGKYYCLNVPLDDGIDDDSYQSIFKP-IISKVM----------EMYRPGA--------VVLQCG-----ADSLSGDRLGCF-------------------NLSGK----------------GHAECVKFMRSFNVPLLL-LGGGGYTIRNVARCWCYETGVALGE--ELRE------KLPYNEYYEYFGPEYS-LYVA----A-SNMENRNTNKQLEEIKCNILDNLSKLQHAPSVQFEERIPE-TKLPE---PDE--------D-QDDPDERHDPD----------SDMLLDDHKPMGHSA-RSLIHNIGVKR---EITETETK------DQHGKRLT-----TEH-KVPEPMADDLG---------------------------------------------SSKQVPTADANSMAINAPGNAKNEPGSSL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [509]
'gi|31324095|gb|AAP47172.1| histone deacetylase HDAC2 [Oryza sativa (japonica cultivar-group)]'                                    ----------------------------------------------------------------------------------------------------------------------MDPSSAGAGGNSLASASCGDA-QKRRV-----------------------------------------------------------------------------------------------------CYFYD------------------PEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLAPAKMQVL-------------------------RPLPARDRDLCRFHSDDYVAFLRAVTPETQFDQIRSLRRFNVGE--DCPVFDGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYIDI-------DIHH--GDGVEEAFYTTN-----------RVMTVSFHKF-GDY-FPGTGDIR------------------DIGYSEGKYYCLNVPLDDGIDDDSYQSIFKP-IISKVM----------EMYRPGA--------VVLQCG-----ADSLSGDRLGCF-------------------NLSGK----------------GHAECVKFMRSFNVPLLL-LGGGGYTIRNVARCWCYETGVALGE--ELRE------KLPYNEYYEYFGPEYS-LYVA----A-SNMENRNTNKQLEEIKCNILDNLSKLQHAPSVQFEERIPE-TKLPE---PDE--------D-QDDPDERHDPD----------SDMLLDDHKPMGHSA-RSLIHNIGVKR---EITETETK------DQHGKRLT-----TEH-KVPEPMADDLG---------------------------------------------SSKQVPVSRRLLY-----------PSANP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [498]
'gi|3659524|gb|AAC61494.1| putative histone deacetylase [Drosophila melanogaster]'                                    ------------------------------------------------------------------------------------------------------------------------------------MQS---H-SKKRV-----------------------------------------------------------------------------------------------------CYYYD------------------SDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATADEMTKFHSDEYVRFLRSIRPDNMSEYNKQMQRFNVGE--DCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDI-------DVHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNIPLRDGMDDDAYESIFVP-IISKVM----------ETFQPAA--------VVLQCG-----ADSLTGDRLGCF-------------------NLTVK----------------GHGKCVEFVKKYNLPFLM-VGGGGYTIRNVSRCWTYETSVALAV--EIAN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTSEYLEKIKNRLFENLRMLPHAPGVQIQAIPED-AINDE--SDDE--------D-KVDKDDRLPQS---------------------------DKDKRIVPEN---EYSDSEDE------GEGGRRDN-----RSYKG----------------------------------QRKR-----------------PRLDKDTNSNKASSE-------------------------------------------------------------------TSSE--IKDEKEKG----------------DGADG----EESTASNTNSNNNSNNKSDNDAGATANAGSGSGTGSGAGAKGAKENNI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [521]
'gi|24657891|ref|NP 647918.2| Rpd3 CG7471-PA [Drosophila melanogaster] >gi|16197909|gb|AAL13716.1| GM14158p [Drosophila melanoga'    ------------------------------------------------------------------------------------------------------------------------------------MQS---H-SKKRV-----------------------------------------------------------------------------------------------------CYYYD------------------SDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATADEMTKFHSDEYVRFLRSIRPDNMSEYNKQMQRFNVGE--DCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDI-------DVHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNIPLRDGMDDDAYESIFVP-IISKVM----------ETFQPAA--------VVLQCG-----ADSLTGDRLGCF-------------------NLTVK----------------GHGKCVEFVKKYNLPFLM-VGGGGYTIRNVSRCWTYETSVALAV--EIAN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTSEYLEKIKNRLFENLRMLPHAPGVQIQAIPED-AINDE--SDDE--------D-KVDKDDRLPQS---------------------------DKDKRIVPEN---EYSDSEDE------GEGGRRDN-----RSYKG----------------------------------QRKR-----------------PRLDKDTNSNKASSE-------------------------------------------------------------------TSSE--IKDEKEKG----------------DGADG----EESTASNTNSNNNSNNKSDNDAGATANAGSGSGSGSGAGAKGAKENNI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [521]
'gi|12698880|gb|AAK01712.1| histone deacetylase HD1 [Oryza sativa]'                                    ----------------------------------------------------------------------------------------------------------------------MD-ASAGGGGNSLPTAG-ADG-AKRRV-----------------------------------------------------------------------------------------------------CHFYD------------------AEVGNYYCGQGHPMKPHRIRMTHALLAHYGLL--DQMQVL-------------------------KPHPARDRDLCRFHADDYVAFLRSVTPETQQDQIRALKRFNVGE--DCPVFDGLYSFCQTYAGGSVGGAVKLNHG-HDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKF-GDY-FPGTGDIR------------------DIGYSEGKYYCLNVPLDDGIDDDSYQSIFKP-IISKVM----------EMYRPGA--------VVLQCG-----ADSLSGDRLGCF-------------------NLSGK----------------GHAECVKFMRSFNVPLLL-LGGGGYAIRNVARCWCYETGVALGH--ELTD------KMPPNEYFEYFGPEYS-LFVA----A-SNMENRNTNKQLEEIKCNILDNLSKLQHAPSVQFEERIPE-TKLPE---PDE--------D-QEDPDERHDPD----------SDMVLDDHKPMGHSA-RSLIRNIEVKR---EITESEAK------DQHGKRLT-----TEH-KGPEPMADDPG---------------------------------------------SSKQAPVSRRLLY-----------PSANP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [493]
'gi|14550104|gb|AAK67142.1| histone deacetylase HDA101 [Zea mays]'                                    ----------------------------------------------------------------------------------------------------------------------MDPSSAGSGGNSLPSVG-PDG-QKRRV-----------------------------------------------------------------------------------------------------CYFYD------------------PDVGNYYYGQGHPMKPHRIRMTHSLLARYGLL--NQMQVY-------------------------RPNPARDRDLCRFHADDYINFLRSVTPETQQDQIRLLKRFNVGE--DCPVFDGLYSFCQTYAGASVGGAVKLNHG-HDIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHHERVLYVDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKF-GDY-FPGTGDIR------------------DIGHSKGKYYSLNVPLDDGIDDESYQSLFKP-IMGKVM----------EVFRPGA--------VVLQCG-----ADSLSGDRLGCF-------------------NLSIK----------------GHAECVRYMRSFNVPLLL-LGGGGYTIRNVARCWCYETGVALGQ--EPED------KMPVNEYYEYFGPDYT-LHVA----P-SNMENKNTRQQLDDIRSKLLDNLSKLRHAPSVHFQERVPD-TEIPE---QDE--------D-QDDPDERHDPD----------SDMEVDDHKAVEESS-RRSILGIKIKR---EFGENATR------VQDGGRVA-----SEH-RGLEPMAEDIG---------------------------------------------SSKQAPQADASAMAIDEPSNVKNEPESSTKLQGQAAAYHKP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [517]
'gi|54641397|gb|EAL30147.1| GA20378-PA [Drosophila pseudoobscura]'                                    ------------------------------------------------------------------------------------------------------------------------------------MQS---H-SKKRV-----------------------------------------------------------------------------------------------------CYYYD------------------SDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATADEMTKFHSDEYVRFLRSIRPDNMTEYNKQMQRFNVGE--DCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDI-------DVHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNIPLRDGMDDDAYESIFVP-IISKVM----------ETFQPAA--------VVLQCG-----ADSLTGDRLGCF-------------------NLTVK----------------GHGKCVDFVKKYNLPFLM-VGGGGYTIRNVSRCWTYETSVALAV--DIAN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTSEYLEKIKNRLFENLRMLPHAPGVQIQAIPED-AINDE--SDDE--------D-KVDKDDRLPQS---------------------------DKDKRIVPEN---AYSDSEDE------GEGGRRDN-----RAYKG----------------------------------QRKR-----------------PRLDKDNNSNKASSE-------------------------------------------------------------------VSSE--IKDEKEKV----------------DGADG----EESTASN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [480]
'gi|1666637|emb|CAA70455.1| histone deacetylase [Drosophila melanogaster]'                                    ------------------------------------------------------------------------------------------------------------------------------------MQS---H-SKKRV-----------------------------------------------------------------------------------------------------CYYYD------------------SDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMDI--------------------------RPHKATADEMTKFHCDEYVRFLRSIRPDNMSEYNKQMQRFNVGE--DCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDI-------DVHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNIPLRDGMDDDAYESIFVP-IISKVM----------ETFQPAA--------VVLQCG-----ADSLTGDRLGCF-------------------NLTVK----------------GHGKCVEFVKKYNLPFLM-VGGGGYTIRKVSRCWTYETSVALAV--EIAN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTSEYLEKIKNRLFENLRMLPHAPGVQIQAIPED-AINDE--SDDE--------D-KVDKDDRLPQS---------------------------DKDKRIVPEN---EYSDSEDE------GEGGRRDN-----RSYKG----------------------------------QRKR-----------------PRLDKDTNSNKASSE-------------------------------------------------------------------TSSE--IKDEKEKG----------------DGADG----EESTASNTNSNNNSNNKSDNDAGATANAGSGSGSGSGAGAKGAKENNI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [520]
'gi|9022439|gb|AAF82385.1| histone deacetylase [Mesembryanthemum crystallinum]'                                    ----------------------------------------------------------------------------------------------------------------------MD-----TGGNSLP-SG-PDG-VKRKV-----------------------------------------------------------------------------------------------------SYFYD------------------PEVGNYYYGQGHPMKPHRIRMTHALLAHYGLL--QHMQVL-------------------------KPVPARDRDLCRFHADDYVSFLRGITPEMQQDQLRQLKRFNVGE--DCPVFDGLYSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKVHERVLYVDI-------DIHH--GDGVEEAFYTTE-----------RVMTVSFHKF-GDY-FPGTETFV------------------YIGYGKGKYYSLNVPLDDGIDDESYQSLFKP-IMGKVM----------EIFKPGA--------VVLQCG-----ADSLSGDRLGCF-------------------NLSIK----------------GHAECVKYMISFNVPLLL-VGGGGYTIRYVARCWCYETGVALGF--ELDD------KIPQHEYYEYFGPDYT-LHVA----P-SNMENKNSRPMLDDIRGKLLEYLSSLQHAPSVQFQERPPE-AEIPE---EDE--------D-QHDPEGRWDPD----------SDMEVDD---------RSISIRSRVKR---EIMEPDLK------DRDDVKDA-----VDHPRDMDVSYGAGN---------------------------------------------TSVKAPTTSSDQ----PEGCVEMEQDNSNRPPDQGPNMNS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [500]
'gi|2583090|gb|AAC23917.1| putative histone deacetylase HDAC1 [Drosophila melanogaster]'                                    ------------------------------------------------------------------------------------------------------------------------------------MQS---H-SKKRV-----------------------------------------------------------------------------------------------------CYYYD------------------SDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLY--RKMEIY-------------------------RPHKATADEMTKFHSDEYVRFLRSIRPDNMSEYNKQMQRFNVGE--NCPVFDGLYDFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDI-------DVHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGDLR------------------DIGAGKGKYYAVNIPLRDGMDDDAYESIFVP-IISKVM----------ETFQPAA--------VVLQCG-----ADSLTGDRLGCF-------------------NLTVK----------------GHGKCVEFVKKYNLPFLMVVGGGGYTIRKVSRCWTYETSVALAV--EIAN------ELPYNDYFEYFGPDFK-LHIS----P-SNMTNQNTSEYLEKIKNRLFENLRMVPHAPGVQIQAIPED-AINDE--SDDE--------D-KVDKDDRLPQS---------------------------DKDKRIVPEN---EYSDSEDE------GEGGRRDN-----RSYKG----------------------------------QRKR-----------------PRLDKDTNSNKASSE-------------------------------------------------------------------TSSE--IKDEKEKG----------------DGADG----EESTASNTNSNNNSNNKSDNDAGATANAGSGSGTGSGAGAKGAKENNI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [522]
'gi|57228643|gb|AAW45078.1| histone deacetylation-related protein, putative [Cryptococcus neoformans var. neoformans JEC21] >gi|'    ------------------------------------------------------------------------------------------------------MTLTDYPTFSSSPFFYDPRNPVLPEAEQGHIRA---H-SNPSV-----------------------------------------------------------------------------------------------------AYYHP------------------KNVGNYHYGERHPMRPHRLELTNQLVLSYGLH--EKMSYH-------------------------APRAATEEELLEFHEADYVDFLKRVTPKNAQALTKDWTKFNVGD--DCPIFYDLFSFCKQYAGGSLAAARKLSSGSADIAINWSGGLHHAKKGEASGFCYINDIVLGILELLRYHPRVLYIDI-------DIHH--GDGVQEAFYLSN-----------RVLTVSFHKYAADF-FPNTGNLS------------------EIGSDLGKYFCLNVPLQDGIDDESYISLFKA-VMEPTI----------TIFKPSA--------IVLQCG-----ADSLGCDRLGTF-------------------NLSIA----------------AHGECVRFIKSFGLPLLA-LGGGGYRQSSVSRCWTYETGVLAGV--QLSN------ELPQNNYYEFFAPDYK-LHPP----LTGKIQNLNTAKSLERIRISIREKLRYLGGAPSVQMQEIPPD-LQGLL----EE--------D-EKSAAEKMDEK---------------------------EEERREGKGK---EIDWLDRE----------VGG---------------------------------------------------------------------SGDGVGSGRYFGGARRRF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [475]
'gi|70989249|ref|XP 749474.1| histone deacetylase RpdA [Aspergillus fumigatus Af293] >gi|66847105|gb|EAL87436.1| histone deacety'    -------------------------------------------------------------------------------------------------------------------------MAAPPIDLNLNGSG---D-RSRKV-----------------------------------------------------------------------------------------------------AYFYD------------------SDVGNYAYVSGHPMKPHRIRMTHSLVMNYGLY--KKMEIY-------------------------RAKPASKYEMTQFHTDEYIDFLSKVTPDNMDQFSKEQGKYNVGD--DCPVFDGLFEFCGISAGGSMEGAARLNRNKCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDI-------DVHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGELR------------------DIGVGQGKHYAVNFPLRDGIDDISYKSIFEP-VIRSVM----------EWYRPEA--------VVLQCG-----GDSLSGDRLGCF-------------------NLSMR----------------GHANCVNFVKSFNLPTMI-LGGGGYTMRNVARTWAFETGILLGE--NLGP------ELPYNDYYEYFAPDYE-LDVR----P-SNMDNANTKDYLDKIRAQVVENLKRTAFAPSVQMTDVPRE-PLVEG--MDDEADAILDDLDEDENKDKRFTKR---------------------------RFDQYIEKPG---ELSDSEDE------EENAANGV-----LRKPQ----------SLKRRNQINYRNVDLDSGLDSGVATPQE-----------------ASSVPDDEMDTTADTKTVEAPLPE--SDVPPSPSATGSTSRRDEKAAAEPTEMAVDGPEEASASAAVSHQQSPKPQDEDTTMEDAAVSVPETGQSEKPALPVEGQEEEKKPE--TPALEKAAPEASPAVQASPIPGEKDVLDKPETND--ATEPVEVKAKEKTPEAPTDQQ--AVKTEQGTSEEASENKSSSAPTEVRTNQQPEEPEKGGE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [688]
'gi|88185568|gb|EAQ93036.1| hypothetical protein CHGG 01271 [Chaetomium globosum CBS 148.51]'                                    ------------------------------------------------------------------------------------------------------------------MPKTTDPSGVERSRPLYEIVN---N-DKKRV-----------------------------------------------------------------------------------------------------AYFYD------------------SDIGNYAYVTGHPMKPHRIRLAHSLVMNYDVY--KFLEIYVSLLLCGGTCLLRTLADGVCLASKQRAKPAVTSEMTQFHTDEYIEFLQKVTPDNMDGFMREQGKYNVGD--DCPVFDGLFEFCGISAGGSMEGAARLNREKCDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLRFKKRVLYIDI-------DVHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGELR------------------DIGIGNGKHYAVNFPLRDGIDDTTYDTIFEP-VIEAVM----------KYFQPEA--------VVLQCG-----GDSLSGDRLGCF-------------------NLSMR----------------GHANCVNFVRSFNLPTLV-LGGGGYTMRNVARTWAYETGRLVGV--EMDS------VLPYNEYYTYYGPDYE-LDVR----S-SNMENANSYEYLEKIKIAVIENLKRTAHAPSVQMQDVPRQ-SMGMS----DDQEAELDDRDEEENPDARLTQR---------------------------QWEKRVERQD---EYEESDDE------DMARANGV-----------------------------------------------------------------YKPNGRSRQETNFRPTNKDDDTMEVDSRAATPPEP-----AAEATVDNDDPMMEEELAEVLAEVAQMEAQDAAADEKTAAEQATETDKPKVDGDGDVDMTEATSADTKEPEATIKREEVEGISATEAEPTKSPVPENTKVADDGEASTTKERGSASPEIAEPDAKPAEEGPSAEKSDDAAIADKKAGDDEAMA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [670]
'gi|71029932|ref|XP 764608.1| histone deacetylase [Theileria parva strain Muguga] >gi|68351564|gb|EAN32325.1| histone deacetylas'    --------------------------------------------------------------------------------------------------------------------------------------------MDKRV-----------------------------------------------------------------------------------------------------SYFYD------------------PDVGSFYYGPGHPMKPQRIRMAHALVLSYDLY--RHMEIF-------------------------RPHKAVEPELLSFHDSEYVHFLSGVSPENYRDFTYQLKRFNVGEATDCPVFDGLYVFQQSCSGASIDAAHRLNNQQADICVNWSGGLHHAKRSEASGFCYLNDIVLGILELLKYHARVMYIDI-------DVHH--GDGVEEAFYVTH-----------RVMTISFHKF-GNF-FPGTGDVT------------------DVGVSSGKYYSVNVPLNDGIDDESFVDLFKV-VVGKCV----------EVYCPGA--------IVLQCG-----ADSLTGDRLGRF-------------------NLTIK----------------GHAACVQYVRSLNIPLLV-LGGGGYTIRNVARCWAYETGVILNKHTDMSN------QISLNDYYDYYAPDFQ-LHLT----P-SQMTNYNTKEHLDKIKVKILDNLRYVEKSPGVQFAHVPPD-FLTRD---DDV----------DDDLQKQVFDE---------GGGRTSLSTRKRI--SLITSSHKLRRRDYKGELYDLPDR-------DDQIPI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [447]
'gi|55234190|gb|EAA01056.2| ENSANGP00000012089 [Anopheles gambiae str. PEST] >gi|58396602|ref|XP 322018.2| ENSANGP00000012089 [A'    ------------------------------------------------------------------------------------------------------------------------------------------M-ATKKV-----------------------------------------------------------------------------------------------------SYFFN------------------PDVGNFHYGPGHPMKPHRLSVIHHLVMNYGLH--KKMQIY-------------------------RPYKASAHDMCRFHSDEYIEFLQRVTPQNIQGYTKCLSVFNVGD--DCPVFDGLFEFCAMYTGASLEGAQKLNHNHSDICINWSGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDI-------DVHH--GDGVQEAFYLTD-----------RVMTVSFHKY-GNYFFPGTGDMY------------------EIGAESGRYYSVNVPLKEGIDDQSYVQVFKP-VISAVM----------EFYQPTA--------IVLQCG-----ADSLAGDRLGCF-------------------SLSTK----------------GHGECVKFVKDLNVPTLV-VGGGGYTLRNVARCWTYETSLLIDE--TISN------ELPMNDYLEFFAPDFT-LHPD----IPSRQDNANSKQYLEAITRHVYDNLKMCQHAPSVQMFDIPED-ALPEELKTVKT--------E-EPNPDVRMTQD---------------------------DEDRLVEPKN---EFFDGDND------NDKSENEP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [433]
'gi|23505157|emb|CAD51938.1| Histone deacetylase [Plasmodium falciparum 3D7] >gi|23613774|ref|NP 704795.1| Histone deacetylase ['    -----------------------------------------------------------------------------------------------------------------------------------------MS-NRKKV-----------------------------------------------------------------------------------------------------AYFHD------------------PDIGSYYYGAGHPMKPQRIRMTHSLIVSYNLY--KYMEVY-------------------------RPHKSDVNELTLFHDYEYIDFLSSISLENYREFTYQLKRFNVGEATDCPVFDGLFQFQQSCAGASIDGASKLNHHCADICVNWSGGLHHAKMSEASGFCYINDIVLGILELLKYHARVMYIDI-------DVHH--GDGVEEAFYVTH-----------RVMTVSFHKF-GDY-FPGTGDIT------------------DVGVNHGKYYSVNVPLNDGMTDDAFVDLFKV-VIDKCV----------QTYRPGA--------IIIQCG-----ADSLTGDRLGRF-------------------NLTIK----------------GHARCVEHVRSYNIPLLV-LGGGGYTIRNVSRCWAYETGVVLNKHHEMPD------QISLNDYYDYYAPDFQ-LHLQ----P-SNIPNYNSPEHLSRIKMKIAENLRHIEHAPGVQFSYVPPD-FFNSD--IDDE----------SDKNQYELKDD--------SGGGRAPGTRAKEH-----STTHHLRRKNYDDDFFDLSDR-------DQSIVPY---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [449]
'gi|67533353|ref|XP 662097.1| hypothetical protein AN4493.2 [Aspergillus nidulans FGSC A4] >gi|8886512|gb|AAF80489.1| histone de'    -----------------------------------------------------------------------------------------------------------------MASGTSGPAGPPLDPIDLNVSG---D-RSKRV-----------------------------------------------------------------------------------------------------AYFYD------------------SDVGNYAYVSGHPMKPHRIRMTHSLVMNYSLY--KKMEIY-------------------------RAKPASKFEMTQFHTDEYIDFLSKVTPDNMDAFAKEQSKYNVGD--DCPVFDGLFEFCGISAGGSMEGAARLNRNKCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDI-------DVHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGELR------------------DIGVGQGKYYAVNFPLRDGIDDVSYKSIFEP-VIKSVM----------EWYRPEA--------VVLQCG-----GDSLSGDRLGCF-------------------NLSMR----------------GHANCVKYVKSFNLPTLI-VGGGGYTMRNVARTWAFETGILVGD--NLGS------ELPYNDYYEYFAPDYE-LDVR----P-SNMDNANTREYLDKIRTQVVENLKRTAFAPSVQMTDVPRE-PLVDG--MDDEAEAALDDLDEDENKDKRFTKR---------------------------RFDQYVEKPG---ELSDSEDE------DENAANGV-----TRKPA----------HLKRRNQANYRLDLADSGVESGMATPQD-----------------ASSVADEEMDTGTDVKITEAPGPEPDSEAQGTSSAAEPPSRAGNGSVDEPSEMIVDS-KEPPRSVPVSRPVSPKPTDEDTAMEDADMPVPEVNQENTPE---ASQATQNKPAEGTPASESAVAKLTSQTKASFESNEGRKQLEPETVKEAGLAAVTTETKDKTPEAPRAGALPAVTAEQETTKQGEPSAEAQPEAAKE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [687]
'gi|46107794|ref|XP 380956.1| hypothetical protein FG00780.1 [Gibberella zeae PH-1] >gi|42547883|gb|EAA70726.1| hypothetical pro'    -----------------------------------------------------------------------------------------------------------------------MGDDIRVELGSVALNA---S-SPKKV-----------------------------------------------------------------------------------------------------AYFYD------------------SDIGNYAYVTGHPMKPHRIRLAHSLIMQYNLY--QKMEIY-------------------------RAKPATRGEMTQFHTDDYIDFLQKVTPDNMDSFMREQGKYNVGD--DCPVFDGLFEFCGISAGGSMEGAARLNRQKCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLRFKKRVLYIDI-------DVHH--GDGVEEAFYTTD-----------RVMTVSFHKY-GEY-FPGTGELR------------------DTGIGQGKNYAVNFPLRDGITDASYRSIFQP-VIENVM----------KYYQPEA--------VVLQCG-----GDSLSGDRLGCF-------------------NLSMD----------------GHANCVNFVKSFNLPTLV-LGGGGYTMRNVARTWAFETGVLVGK--EMDR------TLPYNEYYEYYAPDFE-LNVR----S-SNMENSNSREYLEKITSSVIDNLRQTGPAPSVQLQDVPRK-PFGGM---TDEEEAELDDLDEDENKDVRMTEH---------------------------RWDKHVEHDN---EFEASDDD------EMARVNGA-----------------------------------------------------------------TRQNGNKRSFTDYRKGEMDVD--NPDAPPAKAPNGASNDEAAEEHTGEDGHDVNDDTIDDISAPDQPEKDQPEKATETPTENAKEPELSKVDGDGDVGMEDSAVEETTIKKEDVEPEAPEAPTEPSA-------PTEKSAQDEPTVEAAANDAATTEPIPEPTPAEKPAESTEKAQSEQPADAMDVDTEKDKPEQPKEKSKSPAN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [649]
'gi|84995884|ref|XP 952664.1| histone deacetylase [Theileria annulata strain Ankara] >gi|65302825|emb|CAI74932.1| histone deacet'    --------------------------------------------------------------------------------------------------------------------------------------------MEKRV-----------------------------------------------------------------------------------------------------SYFYD------------------PDVGSFYYGPGHPMKPQRIRMAHALVLSYDLY--RHMEIF-------------------------RPHKAVEPELLSFHDSEYVHFLSGVSPENYRDFTYQLKRFNVGEATDCPVFDGLYVFQQSCSGASIDAAHRLNNQQADICVNWSGGLHHAKRSEASGFCYLNDIVLGILELLKYHARVMYIDI-------DVHH--GDGVEEAFYVTH-----------RVMTISFHKF-GNF-FPGTGDVT------------------DVGVSSGKYYSVNVPLNDGIDDESFVDLFKV-VVGKCV----------EVYCPGA--------IVLQCG-----ADSLTGDRLGRF-------------------NLTIK----------------GHAACVQYVRSLNIPLLV-LGGGGYTIRNVARCWAYETGVILNKHTDMSN------QISLNDYYDYYAPDFQ-LHLT----P-SQMTNYNTKEHLDKIKVKILDNLRYVEKSPGVQFAHVPAD-FLTRD---DDV----------DEDLQKQIFDE---------GGGITTLSTRKRV--SLMT-THRLRRRDNKGEFYDLPDR-------DESIPL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [446]
lcl|Smo_HDA9_41_1_unnamed_protein_product                                    ----------------------------------------------------------------------------------------------------------------------MD-----GSGNSLA-SG-PEG-RSKRV-----------------------------------------------------------------------------------------------------AYFYD------------------PEVGNYYYGQGHPMKPHRIRMTHSLLVHYGIH--NKLEVL-------------------------KPLPAKDRDLCRFHADDYVAFLRVITPETQHEHLRALKRFNVGE--DCPVFDGLYSFCQTYAGGSVGGAVKLNHGHSDIAVNWSGGLHHAKKCEASGFCYVNDIVLAILELLKYHARVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKF-GDY-FPGTGDVR------------------DMGHAKGKYYSLNVPLNDGIDDESYHSLFKP-IITK-------------------------------CG-----ADSLSGDRLGCF-------------------NLSIK----------------GHAQCVKFMRSFNVPLLL-LGGGGYTIRNVARCWCYETAVAVGV--ELED------KMPYNEYYEYFGPDYT-LHVT----P-SNMENQNSAQYLESIRNRLLENLSNLQHVPSVPFQERPPD-TDLPE---EVS--------L-SVASTWRQSPS---------------------------ARDDRIKKEK--EELMDEGSD------IDGDLPKA-----QQEPQDDQPTAME-----------------------------------------------TDAKAEEKCSSLLPDAPSAPLASSADTAHEPNEQSTSNTNWQLVTTSTAATAAAMNARSPLAPPALNQAPPSSTAIATAAWTPPTSATVLWSSSCCHCHCHRHGYRCYELHSGEFSSSSASSSGSSSCDRSSHTNDSLKKAIELTVLIGFGSSTRGEFTSQASSCSLKLCAQNILPDQVLEGDFSTLIQVKVANWKMAGNHELWRRDEEVKAIDRSRLTQRSIDRRIGPRIGIRRGDESGEEEELSVLPRHTKVIVTGNNRTKSVLVGLHGIVKKAVGLGGWHWL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [727]
lcl|Smo_HDA9_42_1_unnamed_protein_product                                    ----------------------------------------------------------------------------------------------------------------------MD-----GSGNSLA-SG-PEG-RSKRV-----------------------------------------------------------------------------------------------------AYFYD------------------PEVGNYYYGQGHPMKPHRIRMTHSLLVHYGIH--NKLEVL-------------------------KPLPAKDRDLCRFHADDYVAFLRVITPETQHEHLRALKRFNVGE--DCPVFDGLYSFCQTYAGGSVGGAVKLNHGHSDIAVNWSGGLHHAKKCEASGFCYVNDIVLAILELLKYHARVLYIDI-------DIHH--GDGVEEAFYTTD-----------RVMTVSFHKF-GDY-FPGTGDVR------------------DMGHAKGKYYSLNVPLNDGIDDESYHSLFKP-IITKVM----------EVFQPGA--------VVLQCG-----ADSLSGDRLGCF-------------------NLSIK----------------GHAQCVKFMRSFNVPLLL-LGGGGYTIRNVARCWCYETAVAVGV--ELED------KMPYNEYYEYFGPDYT-LHVT----P-SNMENQNSAQYLESIRNRLLENLSNLQHVPSVPFQERPPD-TDLPE---EVS--------L-SVASTWRQSPS---------------------------ARDDRIKKEK--EELMDEGSD------IDGDLPKV-----QQEPQDDQPTAME-----------------------------------------------TDAKAEEKCSSLLPDAPSAPLASSADTAHEPNEQSTSNTNWQLVTTSTAATAAAMNARSPLAPPAPNQAPPSSTAIATAAWTPPTSATVV------------ARLPRFSASSGAPVAATVTATATVTAVTSSTVANSPAPAPVPAALARVTEAPTPMTP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [602]
'gi|45382059|ref|NP 990078.1| histone deacetylase 3 [Gallus gallus] >gi|2791688|gb|AAB96925.1| histone deacetylase-3; HD-3 [Gall'    --------------------------------------------------------------------------------------------------------------------------------------------MAKTV-----------------------------------------------------------------------------------------------------AYFYD------------------PDVGNFHYGAGHPMKPHRLALTHSLVLHYGLY--KKMIVF-------------------------KPYQASQHDMCRFHSEDYIDFLQRVSPNNMQGFTKSLNAFNVGD--DCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDI-------DIHH--GDGVQEAFYLTD-----------RVMTVSFHKY-GNYFFPGTGDMY------------------EVGAESGRYYALNVPLRDGIDDQSYKHLFQP-VINQVV----------DYYQPTC--------IVLQCG-----ADSLGRDRLGCF-------------------NLSIR----------------GHGECVEYVKSFNIPLLV-LGGGGYTVRNVARCWTYETSLLVDE--AISE------ELPYSEYFEYFAPDFT-LHPD----VSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPSD-LLSYD----RT--------D-EPDPEERGSEE---------------------------NYSRP-EAAN---EFYDGDHD------NDKESDVEI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [428]
'gi|39580205|emb|CAE71712.1| Hypothetical protein CBG18689 [Caenorhabditis briggsae]'                                    ----------------------------------------------------------------------------------------------------------------------------------------LLH-SKSRV-----------------------------------------------------------------------------------------------------SYYYD------------------GDFGNFYYGQGHPMKPHRVRMTHSLIVNYGLY--RKLTVM-------------------------RPAPASFSEITRYHSDDYVNFLRSVRSDNIQSLADQMARFSVGE--DCPVFDGLYEFCQLSCGGSLAAAAKLNRKESDIAINWMGGLHHAKKSEASGFCYSNDIVLAILELLKEHKRVLYIDI-------DVHH--GDGVEEAFYTTD-----------RVMTVSFHKH-GEY-FPGTGDLK------------------DVGAGKGKYYALNVPLRDGVDDFTYERIFRT-VMGEVM----------ARFQPEA--------VVLQCG-----ADSLAGDRLGVF-------------------NLTTY----------------GHGNCVEYMKSFNVPLLL-VGGGGYTIRNVSRCWLYETSLALDL--DVPN------ELPFNDYFDYFIPDYK-LHIK----PLPHLTNYNTQEFIDQTIVSLLDNLKLMTHVPSVQMQPLPTT-SDRIV-KTFDE----NLRRD-HQDDDVRNSQL---------------------------DQDVGIEHAS---EFYDEQEA------TRNTHKRQ------------------------------------------------------------------RFESQTEASEDAKKTRVDGEE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [458]
'gi|66735114|gb|AAY53803.1| histone deacetylase 3 [Toxoplasma gondii]'                                    --------------------------------------------------------------------------------------------------------------------------------------MALSA-LRKRV-----------------------------------------------------------------------------------------------------AYFYD------------------PDIGSYYYGPGHPMKPQRIRMAHALVLSYDLY--KHMEVY-------------------------RPHKSIEPELCLFHSSDYISFLSSVSPENYKEFSLQLKNFNVGEATDCPVFDGLFTFQQACAGASIDAAKKLNHHQADICVNWSGGLHHAKRSEASGFCYINDIVLGILELLKYHARVMYIDI-------DIHH--GDGVEEAFYVSH-----------RVMTVSFHKF-GDF-FPGTGDVT------------------DVGASQGKYYAVNVPLNDGMDDDSFVALFKP-VITKCV----------DVYRPGA--------IVLQCG-----ADSLTGDRLGKF-------------------NLTIK----------------GHAACVAFVKSLDIPLLV-LGGGGYTIRNVARCWAYETGVVLDRHREMSP------HVPLNDYYDYYAPDFQ-LHLT----P-SSIPNSNSPEHLEKIKTRVLSNLSYLEHAPGVQFAYVPPD-FFGED--NDDE----------DEFMQNQVDNE---------GGGRAAGATAH----TAANAPYRIRRKDYANDFEDMADR-------DQKVPI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [451]
;
END;


BEGIN CODONS;
	CODESET  * UNTITLED = Universal: all ;
END;


BEGIN ASSUMPTIONS;
	OPTIONS  DEFTYPE=unord PolyTcount=MINSTEPS ;
	EXSET * UNTITLED  =  1-660 666-684 705-706 711-716 733 738-741 743 784 790-793 796-805 813-1529;
END;


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END;