#NEXUS 
[MacClade 4.08 registered to obaramari, ERATO hasebe project]


BEGIN DATA;
	DIMENSIONS  NTAX=69 NCHAR=4885;
	FORMAT DATATYPE=PROTEIN  SYMBOLS = " 1 2 3 4"  MISSING=? GAP=- ;
MATRIX
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'gi|42569166|ref|NP 179582.2| RNA-directed RNA polymerase [Arabidopsis thaliana]'                                    M----MTTTMDYNSSDQGFSWSEIALLGSVETMLEKVYGKHNHHPPIKV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ETRRRLSSISEELALETLRKVLNMPN--VKTLDGIIIYFLNDAVTVDGSPRLW----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGESPVQFPRTPGKKSCRASQAEVSLDREDPSPKFLRGDENGESKHISLL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LALGELEFKKAFLLLTYLGG------KS----------------------------------------------------------------LGEVISGDEIRQWKDLPMVAYERAVWFKLGQ-----NEERMQLESD-----------------------------------------SGKTHYYQCHVAPDGSYRLK------------GYFLENTGTHLHKVLG---DDNVLTVRFDQLPK----------------------------------------------------------------ESTYCDNPYSKYKEIAKNGIMV-------GLRRYQFFVFKDGGKAEKKKRN--------STKQVKCYFIRTGSTASS-------------------------------------DMENPYI---------LSGMSIHEARMHFM---HVHT----LP--SPANYMARFSL-----IL-------------------SKTKKL--------------EVDMTEITVMQ---IDDIHCHDQSNNDVL--------DKNGKPRIHSDGTGYISEDLARMCPLNIFK-------------------GKSMRSNNI---------QGTCVQEPPLLIQIRMFNDGSAVKGIFLL--NK-N-------------------------LP-----PQTVQVR-PSMIKV---------------------YKDKNLS--NFSTFNSLEVVTT----------SNPPKRAKLSKNLVALLSYGG----------VPNDFFLDILLNTLEKK---------KTIFFKVRAAGK----AALHYGNMD-----------------------DKNALQMIMAGIPL---DEPYLKHYLSKLLKLEK-DDLK-AGKLPIDE--SYYLMGTVDPTG--ELKED---------------------EVSGLA-------------------------------------------------KSQDV-LVYRNPGLHF--GDIHILKATYVKS----------LEQ----------YVGNSKYGVFFPQKGP----RSLGDEIAGGDFDGDMYFISRNPKL--LEHY--KPSEPWVSSSPR--SKIYTGRQP---------SELSPEQ------------------------LEEELFK----------------------------------------------------------------------------------------IFLKTGFSPSS-VIGQAADSWLAIM---DRFLTLGDENV--KEKAEMKKKML---------------------------KLTDIYY----DAIDAPKTGTE---------VN---------------LPLD----VKVD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LF-P---HYMERN-----------------------------------KT---FK--------------------------------------------STSILGLIFDTVDFHNAEDTTP---------------------------------SGISKLQCFED----------------------------------------------EPVSEFDMEKCKLW---HKDYRKEMCQAMNSDD------------------------------------------------------------------------------DDSCNEVIQKYKQEFYS-----------------------AAGFKESKKILEELYPKALALYNVT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [927]
'gi|3687226|gb|AAC62124.1| hypothetical protein [Arabidopsis thaliana]'                                    M----MTTTMDYNSSDQGFSWSEIALLGSVETMLEKVYGKHNHHPPIKV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ETRRRLSSISEELALETLRKVLNMPN--VKTLDGIIIYFLNDAVTVDGSPRLW----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGESPVQFPRTPGKKSCRASQ-EVSLDREDPSPKFLRGDENGESKHISLL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LALGELEFKKAFLLLTYLGGDRLCNRKS----------------------------------------------------------------LGEVISGDEIRQWKDLPMVAYERAVWFKLGQ-----NEERMQLESD-----------------------------------------SGKTHYYQCHVAPDGSYRLK------------GYFLENTGTHLHKVLG---DDNVLTVRFDQLPK----------------------------------------------------------------ESTYCDNPYSKYKEIAKNGIMV-------GLRRYQFFVFKDGGKAEKKKRN--------STKQVKCYFIRTGSTASS-------------------------------------DMENPYI---------LSGMSIHEARMHFM---HVHT----LP--SPANYMARFSL-----IL-------------------SKTKKL--------------EVDMTEITVMQ---IDDIHCHDQSNNDVL--------DKNGKPRIHSDGTGYISEDLARMCPLNIFK-------------------GKSMRSNNI---------QGTCVQEPPLLIQIRMFNDGSAVKGIFLL--NK-N-------------------------LP-----PQTVQVR-PSMIKV---------------------YKDKNLS--NFSTFNSLEVVTT----------SNPPKRAKLSKNLVALLSYGG----------VPNDFFLDILLNTLEKK---------KTIFFKVRAAGK----AALHYGNMD-----------------------DKNALQMIMAGIPL---DEPYLKHYLSKLLKLEK-DDLK-AGKLPIDE--SYYLMGTVDPTG--ELKED---------------------EVC-----------------------------------------------------------VILNPGLHF--GDIHILKATYVKS----------LEQ----------YVGNSKYGVFFPQKGP----RSLGDEIAGGDFDGDMYFISRNPKL--LEHY--KPSEPWVSSSPR--SKIYTGRQP---------SELSPEQ------------------------LEEELFK----------------------------------------------------------------------------------------IFLKTGFSPSS-VIGQAADSWLAIM---DRFLTLGDENV--KEKAEMKKKML---------------------------KLTDIYY----DAIDAPKTGTE---------VN---------------LPLD----VKVD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LF-P---HYMERN-----------------------------------KT---FK--------------------------------------------STSILGLIFDTVDFHNAEDTTPSA---------------------------LGYLSGISKLQCFED----------------------------------------------EPVSEFDMEKCKLW---HKDYRKEMCQAMNSDD------------------------------------------------------------------------------DDSCNEVIQKYKQ-----------------------------------------------VSSSI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [905]
'gi|42569164|ref|NP 179581.2| RNA-directed RNA polymerase [Arabidopsis thaliana]'                                    M---------MNNGCDEVSPRSEIALLGSVETMLEKIYEKHNHRLPISV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ETRRKLSSISEELALETLRKVFNKPY--LKTLDGLIMYFVKGTVTVDGSPRLS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGESPVQSPRTPAKKSCRASQ-DVSLDLETPSPKFMKREENGGSKYIPPL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LALGELEFKKAFLLLSYIGGESL---------------------------------------------------------------------VEEVISGDQIRKWKDLPMVSYEAAVWNRLGQRYCSPKERRRPLEGD-----------------------------------------SGMTHYYQCHVATDGSYKFK------------GHLLENTGTHLHKVLG---DDNVLTVKFDKVLG----------------------------------------------------------------VETYCNDLYSTYKGIAKNGIMV-------GLRRYRFFVFKDGGKEEKKKDV--------STKGVKCYFIRTDSTASI-------------------------------------DMQNPYI---------FAGKSMHEARMHFM---HVNT----LS--SLPNYMSRFSL-----IL-------------------SKTKTL--------------EVDMTGITFEQ---IDDIHCHDQDDKDVL--------DKNGKPCIHSDGTGYISEDLARMCPVNIFK-------------------GKSMRSNNIQSKNLNFEGQGPCGQEPPLLIQFRIFYNGYAVKGTFLT--NK-K-------------------------LP-----PRTVQVR-PSMIKV---------------------YEDRTLS--NLSTFNSLEVVTT----------SNPPRKARLSRNLVALLSYGG----------VPNDFFLNILRNTLEES---------KTIFYSERAAFK----AAINYGD-------------------------DQYTADMILVGIPL---DEPYLKDRLSYLLKTER-NALK-AGRFPIDE--SYYIMGTVDPTG--ELKEN---------------------EICVIL---------------------------------------------HSGQISGDV-LVYRNPGLHF--GDIHVLKATYVKA----------LED----------YVGNAKFAVFFPQKGP----RSLGDEIAGGDFDGDMYFISRNPKL--LEHF--KPSEPWVSSSKP--SKIYCGRKP---------SELSEEE------------------------LEEELFK----------------------------------------------------------------------------------------MFLKARFCKRD-VIGMAADCWLGIM---DPFLTLGDESA--KEKYERKKNIL---------------------------KLIDIYY----DALDAPKKGAK---------VD---------------LPPD----LEIK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NF-P---HYMERDP---------------------------------KRD---FR--------------------------------------------STSILGLIFDTVDSHNAEEPPP---------------------------------SEISKLWYFED----------------------------------------------EPVPKSHMDKFTSW---YENYRSEMSQAMMETDK--------------------------------------------------------------------------VKRNQLTNEVIQRYKQDFYG-----------------------AAGFEDSNKSLEELYPQALALYNVVYDYAIQEGVAKC------------------------------------------------------------------------------------------------------------------TFAWNV----------------------------------------------------------------------------------------------------AGPVLCKFYL-KKTKDKSVVASTSVL-----KKLLG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [992]
'gi|3687227|gb|AAC62125.1| hypothetical protein [Arabidopsis thaliana]'                                    M---------MNNGCDEVSPRSEIALLGSVETMLEKIYEKHNHRLPISV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ETRRKLSSISEELALETLRKVFNKPY--LKTLDGLIMYFVKGTVTVDGSPRLS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGESPVQSPRTPAKKSCRASQ-DVSLDLETPSPKFMKREENGGSKYIPPL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LALGELEFKKAFLLLSYIGGESL---------------------------------------------------------------------VEEVISGDQIRKWKDLPMVSYEAAVWNRLGQRYCSPKERRRPLEGD-----------------------------------------SGMTHYYQCHVATDGSYKFK------------GHLLENTGTHLHKVLG---DDNVLTVKFDKVLG----------------------------------------------------------------VETYCNDLYSTYKGIAKNGIMV-------GLRRYRFFVFKDGGKEEKKKDV--------STKGVKCYFIRTDSTASI-------------------------------------DMQNPYI---------FAGKSMHEARMHFM---HVNT----LS--SLPNYMSRYSI-------------------------------------------------------------------DQDDKDVL--------DKNGKPCIHSDGTGYISEDLARMCPVNIFK-------------------GKSMRSNNIQSKNLNFEGQGPCGQEPPLLIQFRIFYNGYAVKGTFLT--NK-K-------------------------LP-----PRTVQVR-PSMIKV---------------------YEDRTLS--NLSTFNSLEVVTT----------SNPPRKARLSRNLVALLSYGG----------VPNDFFLNILRNTLEES---------KTIFYSERAAFK----AAINYGD-------------------------DQYTADMILVGIPL---DEPYLKDRLSYLLKTER-NALK-AGRFPIDE--SYYIMGTVDPTG--ELKEN---------------------EICVIL---------------------------------------------HSGQISGDV-LVYRNPGLHF--GDIHVLKATYVKA----------LED----------YVGNAKFAVFFPQKGP----RSLGDEIAGGDFDGDMYFISRNPKL--LEHF--KPSEPWVSSSKP--SKIYCGRKP---------SELSEEE------------------------LEEELFK----------------------------------------------------------------------------------------MFLKARFCKRD-VIGMAADCWLGIM---DPFLTLGDESA--KEKYERKKNIL---------------------------KLIDIYY----DALDAPKKGAK---------VD---------------LPPD----LEIK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NF-P---HYMERDP---------------------------------KRD---FR--------------------------------------------STSILGLIFDTVDSHNAEEPPP---------------------------------SEISKLWYFED----------------------------------------------EPVPKSHMDKFTSW---YENYRSEMSQAMMETDK--------------------------------------------------------------------------VKRNQLTNEVIQRYKQDFYG-----------------------AAGFEDSNKSLEELYPQALALYNVVYDYAIQEGVAKC------------------------------------------------------------------------------------------------------------------TFAWNV----------------------------------------------------------------------------------------------------AGPVLCKFYL-KKTKDKSVVASTSVL-----KKLLG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [966]
'gi|42569168|ref|NP 179583.3| RNA-directed RNA polymerase [Arabidopsis thaliana]'                                    M--------------NQASSRIRIALSGRIETALENIYRKHN-LTPIND-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ETRQRLSSIPENLGFELVRKVFSLQAGLIYNLDSFIVSKVNQAVSFTGYPQPA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------NSLSP------SGRHVSRVLQEEMSVDSDAPSPKSLKSEDKGGSLHIPQL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VALGELEFKKVFLLLSYIPG------QH----------------------------------------------------------------VGQVITADEIRLWKDLPMVEYEAAVWDRLGRHYC-PQKDRRMLQWD-----------------------------------------SGKTHYYQCNVAPNGSYTFKVLSA------LQGPLLEHTGTHLHKVLG---DDNVLTVKFADVQK---------------------------------------------------------------SSSTYSIDHYFTYKGIAKNGIMI-------GLRRYQFFVFKDGGKEEKKKDL--------STKKVKCYFIRTDSTAFY-------------------------------------DMQNPYI---------LTGKSIYEARMHFM---HVHR----AP--TLANYMARFSL-----IL-------------------SKTKTL--------------EVDMTGITFDQ---IDDIHCHDQDGKDVL--------DKNKKPCIHSDGTGYISEDLARMCPLNIFK-------------------GKCLRSESI---------QEACYQDPPLLIQFRMFYDGYAVKGTFLL--NK-K-------------------------LC-----PRTVQVR-PSMIKV---------------------SKDPSLS--NFSTFNALEVVTT----------SNPPKRTKLSKNLVALLSYGG----------IPNEFFLDILLNTLEES---------KSIFYNKRAALN----AALNYGEMD-----------------------DQNAAQMILVGIPL---DEPHLKNYLSILLKTEK-NDLK-AGKLPVTE--SYYLMGTVDPTG--ALKED---------------------EVCVIL---------------------------------------------ESGQISGEV-LVYRNPGLHF--GDIHILKATYVKA----------LEE----------YVGNSKFAVFFPQKGP----RSLGDEIAGGDFDGDMYFISRNPEL--LENF--KPSEPWVSLTPP--SKSNSGRAP---------SQLSPEE------------------------LEEELFE----------------------------------------------------------------------------------------MFLTAGFHASN-VIGIAADSWLTIM---DRFLILGDDRA--EEKAEMKKKML---------------------------ELIDIYY----DALDAPKKGDK---------VY---------------LPNK----LKPD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IF-P---HYMERD-----------------------------------KK---FQ--------------------------------------------STSILGLIFDFVKSQTTEEPSPSS--------------------------------EISKLPCFED----------------------------------------------EPVSEFHMQKCRLW---YDNYRTEMTQAMKTDK------------------------------------------------------------------------------DESANEVIQRYKQEFYG-----------------------AAGFEDSKKSLEELYPQALALYKIVYDYAIHAGVSKC------------------------------------------------------------------------------------------------------------------RFVWKV----------------------------------------------------------------------------------------------------AGPVLCRFYLNKKMQEKCLVCAPSVL-----KELWG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [977]
'gi|3687225|gb|AAC62123.1| hypothetical protein [Arabidopsis thaliana]'                                    M--------------NQASSRIRIALSGRIETALENIYRKHN-LTPIND-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ETRQRLSSIPENLGFELVRKVFSLQAGLIYNLDSFIVSKVNQAVSFTGYPQPA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------NSLSP------SGRHVSRVLQEEMSVDSDAPSPKSLKSEDKGGSLHIPQL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VALGELEFKKVFLLLSYIPG------QH----------------------------------------------------------------VGQVITADEIRLWKDLPMVEYEAAVWDRLGRHYC-PQKDRRM-----------------------------------------------------------------------------GPLLEHTGTHLHKVLG---DDNVLTVKFADVQK---------------------------------------------------------------SSSTYSIDHYFTYKGIAKNGIMI-------GLRRYQFFVFKDGGKEEKKKDL--------STKKVKCYFIRTDSTAFY-------------------------------------DMQNPYI---------LTGKSIYEARMHFM---HVHR----AP--TLANYMARFSL-----IL-------------------SKTKTL--------------EVDMTGITFDQ---IDDIHCHDQDGKDVL--------DKNKKPCIHSDGTGYISEDLARMCPLNIFK-------------------GKCLRSESI---------Q-------PLLIQFRMFYDGYAVKGTFLL--NK-K-------------------------LC-----PRTVQVR-PSMIKV---------------------SKDPSLS--NFSTFNALEVVTT----------RS--------------------------------------------------------QIF------GA----AALNYGEMD-----------------------DQNAAQMILVGIPL---DEPHLKNYLSILLKTEK-NDLK-AGKLPVTE--SYYLMGTVDPTG--ALKED---------------------EVCVIL---------------------------------------------ESGQISGEV-LVYRNPGLHF--GDIHILKATYVKA----------LEE----------YVGNSKFAVFFPQKGP----RSLGDEIAGGDFDGDMYFISRNPEL--LENF--KPSEPWVSLTPP--SKSNSGRAP---------SQLSPEE------------------------LEEELFE----------------------------------------------------------------------------------------MFLTAGFHASN-VIGIAADSWLTIM---DRFLILGDDRA--EEKAEMKKKML---------------------------ELIDIYY----DALDAPKKGDK---------VY---------------LPNK----LKPD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IF-P---HYMERD-----------------------------------KK---FQ--------------------------------------------STSILGLIFDFVKSQTTEEPSPSSGKGPLLVLLYTYNQITKEIINHDMCFTVVYNLEISKLPCFED----------------------------------------------EPVSEFHMQKCRLW---YDNYRTEMTQAMKTDK------------------------------------------------------------------------------DESANEVIQRYKQEFYG-----------------------AAGFEDSKKSLEELYPQALALYKIVYDYAIHAGVSKC------------------------------------------------------------------------------------------------------------------RFVWKV----------------------------------------------------------------------------------------------------AGPVLCRFYLNKKMQEKCLVCAPSVL-----KELWG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [929]
'gi|34903600|ref|NP 913147.1| P0419B01.13 [Oryza sativa (japonica cultivar-group)]'                                    M----YNPIGSAEAREPAELPAAVAAELERLEGRLRQLAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EARRHLAVLGEAGAARVLRAVAESRR--VRTLPGFIKYLAKREAAITRRDARGVPTALSAPAFISGPSREEESVYTQLFDNEVQMYDQSPSNEMATSLSNHGMVEVGSPNQQMPFHLHGNGGSVRQIARLVPQLAQLTVESPCGHTSSV-SQNQGCIEVGTPTQAM-----------IDSPARAMAPAVPNDVMMQV-GSPCRCMPSGLQNYIEIDSPIQPMISTPR---RVSTPSSVQDISRLIENMAGPSVSPPSPITAMPQNPTTTCHTTDNALREAASPQM------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LALEELGFRKIFMVFAYLA----------------------------------------------------------------------SEKIENVLSVDYIRSLKFLSMAQFESQIWRTFGHKYIAASDRAK------------------------------------------------------------------------------GPYIENTRTHLQKVVG---DDNVLVVKFMGKLS---------------------------------------------------------------DTKTDFSTYCEHYHKVAEDGIVL-------GLRRYRFFVYKDGGKEEKLKQEKIEDKNK-CTSPVMCYFVRTESGW---------------------------------------NMDEPYI---------LSGRTVGQARELFM---HISS----AP--TLAKYMARFAL-----IL-------------------SKTITW--------------DADLSAVYVRR---IKDEPCMDRHGNVV---------HKDQEPLIHTDGTGLVSVDLALNCPTSIFK--------------------------------------GKFLKPQPLLMQFRLFYNGSAVKGTVLV--DR-R-------------------------LP-----PATILIR-PSMVKIETHPELSGVRSVNSSEIVSARNAKKSLS--GVQSVNSFEIVST----------SNRPRRTLTSRFLITLLCYGG----------VPEEYFLELLQSAIEGA---------ENACYDYEDALR----IAFSYADME-----------------------DSMSARMILSGIPL---EESYLQHRLDFMAQQER-KGIK-QGKIPIDE--CYYLMDTTDPTG--TLRPN---------------------EVCVIL---------------------------------------------ENGQFSGDV-LVYKHPGLHF--GDIHVLKATYIRD----------LEK---------EYVGYAKYAILFPISGP----RSLADEMANSDFDGDIYWVSKNPKL--LEHF--KPSEPWVQAIKPKKTK---QKKP---------QDCNESK------------------------LERLLFH----------------------------------------------------------------------------------------EFLKTRFTPSF-ALGTAADSWLAYM---DRLLTDSLDE---IEKKLIEEKML---------------------------KLVDLYY----LALDAPKTGNK---------VN---------------IPSD----LMVK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QY-P---HFMGR-----------------------------------SFS---YH--------------------------------------------SSSILGQIYDKAEDVESLRSCN------------------------------VQPIGVSLLPCFME----------------------------------------------REAPPAARHLWQHR---YEEYLTDSTMLYRAMVD------------------------------------------------------------KEERNM-------------KFQELYEKYKHMLYD-----------------------ASEFEQTQRDPDDVFSEACVIYQIVYEKARWSNDASRC-----------------------------------------------------------------------------------------------------------------GFAWKV----------------------------------------------------------------------------------------------------AGRALCHFYALKNEGDTALCSLPLLR-----KI-IKKDHRRNQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1148]
'gi|34903602|ref|NP 913148.1| P0419B01.14 [Oryza sativa (japonica cultivar-group)]'                                    M-----NPHGGGNQMREPALPAAVGAELERLEARLGQLACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EARRQLAELGEPAAARVLRAIGEARQ--VRTLSGFIRHMANQERMKRNARGIP---TAHSAACISGPCREEESISTPLYYNEVQMDAQTPND----------MVEVGSPNQQMPLRLHDNGGSVGHIARVVPDLANPAVGSPYGRISSVLLQNQNCVEGYTPSRGMVSPASNQVAVQINFPTQPMAHALPNDVMMQV-GSPGHRMPSGLQRHMEIDSPIQPIVSTPE---RVSTPSPVRDLSRCVENMAGPSGSPPCPIWVMPQIPPAICPDTTNVLREVVSPQM------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LALGELEFRKIFMIFAYLSWNKKGVKPP--------------------------------------------------------LSTPKSSKIEDVLSVDSIRSLKSMSMAQFESRIWSTFGHDNISSSDRAKNLDSG-----------------------------------------PGMSKVYHCNVEIRGGTVVKIFK---------GPYIENRRTHLQKVLG---DDNVLVVKFMEISS---------------------------------------------------------------DTETDLSTYLEHYHKVAEEGIVL-------GLRCYRFFLYKDGGKENKMKEENREEENKKCTSSVRCYFVRTESGW---------------------------------------NMDEPYI---------LSGRTIGQARDLFM---HIRT----VL--TLAKYMLRFAL-----IV-------------------SKTITL--------------DVDLSEVLVKL---IDDEPCLDEHGKEV---------FRDGERLIHTDGTGLISEDLAQKCTYSNSK--------------------------------------GKLLEPQPLLIQLRLFYNGSAVKGTVLV--DK-RNTQENFIIYDYVKVVYKKSRIYPCFIQ-----DRTIHIR-PSMLKIKTYPELSGVQSVNSLDIVSARNAKKSLS--GVQSVNSFEIVSTSYTSRITCHLSNRSGRTFTSNNLIALLHYGG----------VPEEFFMELLQTAIEEA---------DNARFDYAGALN----IAFNYADME-----------------------DSMPARMILSGIPL---EESYLQSRLDFLSLLER-KGIK-NGKIPIDD--CYYLMGTADPTG--KLGPN---------------------EVCVIL---------------------------------------------DYGQVSGDV-LVYKYPGLHP--GDIHVLKATYSSD----------IEK----------VVGNSKHAILFPTTGQ----RSLADEMANSDFDGDIYWVSLNPKL--LEHF--KPSKPWVPAITPNGTK---QKGP---------EDFNESE------------------------LERVLFH----------------------------------------------------------------------------------------EFLKTRFAPSY-ARATAATNWLVYM---DRLLTVSLDE---SEKKLIEKKML---------------------------KLVDLYY----LALDAPKMGNK---------VN---------------IPRD----LMVK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QY-P---HFMDR-----------------------------------SPS---YH--------------------------------------------SSSILGKIYDKAGDPKPLRSDN------------------------------VQPTSISSLPCFAE----------------------------------------------RDVPPAIKQLWQHR---YNEYLADSSLLYAEEAD------------------------------------------------------------EEEKKI-------------KFQELYEKYKHLLYG-----------------------ASEFEETPRDLDDVFSEACAIYQIAYEKARSANNVARC-----------------------------------------------------------------------------------------------------------------GFAWKV----------------------------------------------------------------------------------------------------AGRALCHFYTVKNEGNAVVCSLQLLR-----NFRFTKKYRK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1222]
lcl|Smo_RDR4_3_1_unnamed_protein_product                                    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NSAPRVPKSLMYTCDVDEHGRISYQ------------RPYYEDGRTPLQRAFG---DDKVLQVRFNCQGV----------------------------------------------------------------------TSPEMYRDIIERGFDV-------GLRHFEYFVHKEEKKRKNMRKVK-------QTRQQRSFFVCTKSIAAS-------------------------------------DLVDPHF---------LKFRSMDACRKYIM---HIHT----VP--CLQLYNKRLQL-----AL-------------------SKTWTANHDPGGEIAV-----------------------------------------GCNGKPLIHTDGTGFISEDLAKQVAVNTSE-------------------------------------------EYPALLQVRLFYHGIAVKGTLLT--LK-T-------------------------LQ-----HKTIVYR-DSMLKV---------------------KADPKLA--NCPSFNSLEICTT----------SHKPPVASLSRYVIALLLEGG----------VPESFFIQVVQEAIAKA---------MTPLQDIAAAHR----LCSRFSF-------------------------GDMPRRMILAGIPL---TDHFLRNSLMTMIRTQL-KRYA-KANVPLEG--SYYLMGSADPTN--TLARN---------------------QVAILL--------------------------------------------ENGPLHRHKV-LVYKHPGMHP--GDVHVFEATWNQE----------LES----------CLGNSKYVIIFPTKGP----RSVVHEIANSDLDGDLYWICTNEQV--SNLY--KPQLPWQEKRTNGTTAVPSC------------LGMSPEV------------------------IMSRLVA----------------------------------------------------------------------------------------MFLRAIFKPNF-AISRAATNWLIHM---DKYLSTSF--DNVREREFRQNCLL---------------------------ELADLYY----LALDADKTGEMVILVGVKTLVT---------------IEDR----LLCD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KIKP---HFLVEENSNNPNRRKI------------------------QQQDNVYR--------------------------------------------STSIFGKIYNLVTEVIENEAKE-----------------------------------FTGPLMFYE----------------------------------------------EFVYGNYLSYKDLWRQHFNNYRLEISLALTRNRP-------K-----------------------------------------------------------------------TAEEIPAPYWQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [685]
lcl|Smo_RDR4_5_1_unnamed_protein_product                                    M----GDAREEEPVARKRLFHGWSQDDVEEFLEQDDAVMSQLPVSPED-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RALGELDFYKRYLIQCLAKGR---------------------------------------------------------------------------LGVEELRQMKDVKCEAFESYLCSLVNARQR--------------------------------------------LPLNNSASGVPKSLMYTCDVDEHGRISYQ------------RPYYEDGRTPLQRAFG---DDKVLQVRFNCQGV----------------------------------------------------------------------TSPEMYRDIIERGFNV-------GLRHFEYFVHKEEKKRKNMSKVK-------QTRQQRSFFVCTKSIAAS-------------------------------------DLVDPHF---------LKFRSMDACRKYIM---HIHT----VP--CLQLYNKRLQL-----AL-------------------SKTWTAN---------------------------------------------------------------------------------------------------------------------------EYPALLQVRLFYHGIAVKGTLLT--LK-T-------------------------LQ-----HKTIVYR-DSMLKV---------------------KADPKLA--NCPSFNSLEICTT----------SHKPPVASLSRYVIALLLEGG----------VPESFFIQVVQEAIAKA---------MTPLQDIAAAHR----LCSRFSF-------------------------GDMPRRMILAGIPL---TDHFLRNSLMTMIRTQL-KRYA-KANVPLEG--SYYLMGSADPTN--TLARN---------------------QVAILL--------------------------------------------ENGPLHRHKV-LVYKHPGMHP--GDVHVFEATWNQE----------LES----------SLGNSKYVIIFPTKGP----RSVVHEIANSDLDGDLYWICTNEQV--SNLY--KPQLPWQEKRTNGTTAVPSC------------LGMSPEV------------------------IMSRLVA----------------------------------------------------------------------------------------MFLRAIFKPNF-AISRAATNWLIHM---DKYLSTSF--DNVREREFRQNCLL---------------------------ELADLYY----LALDADKTGEM---------VT---------------IEDR----LLCD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KIKP---HFLVEENSNNPNRRKI------------------------QQQDNVYR--------------------------------------------STSIFGKIYNVVTEVIENEAKE-----------------------------------FTGPLMFYE----------------------------------------------EFVYGNYLSYKDLWRQHFNNYRLEMSLALDEKSA-------E-----------------------------------------------------------------------KTDEIAAQYCQMLYT----------------------GSTNLDGAKKSIYQIYQESCAIYSVVHDH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [769]
lcl|Ppa_RDR4_3_1_unnamed_protein_product                                    V-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTLEQIKKLERLSLEDIPGYVSREVAINKGVRNEAFPY------IRCVKPRSTSTLLHRIFG---DDRVMPVYFNEFPT-------------------------------------------------------------------------EDKFQLVRDGILV-------GLRRYRLWSFKDSGKGDFRNRTKPYAKD--YQRAVKCFFVCTESLADV-------------------------------------DLSDPNF---------KYFTRIEAARCHIM---HIHA----MP--TMPRFASRLQL-----AL-------------------SKSVTA--------------NLNWDEIEVKQ---IPDILSKTL--------------DNSGKFMAHTEGTSEISPDVARLLP?---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [222]
'gi|83773394|dbj|BAE63521.1| unnamed protein product [Aspergillus oryzae]'                                    M----QRATEK---------------PQLSEREHGRGSRKQRSRKGKKHHKRSSTLGPSSQTSSSTNKGSEDRSSSTATYQTGVSP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HRALTTSTSRQPQNSSRLQQQPA--QLLLAPWTFWDTVAVNLFNLPRE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IN-----TRILWQ-TFSSEGYV---------------------------------------------------------------------------------------SSIDLFEDSHGNRDS------RGKIRFK-----------------PPPKT-DFWRKGLYTIKLPNGRTSVINIGLDL------NREEPQIASPVRSGVSYPVEVK---------------LPI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSMDIGVLLSETTMLP------MR-----------------------SVGSGENES-SRLVLNLKQKALFVYFQLPIFTPGYKPTPASGMLQ---------EYRLKIPFVQLSWIFQVR----------DTVTGDISHFIVLDS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PP---LYHRRINNIDVTHSEENNTW-----RESETWYRQTYIVRNALELPY-LPIGLKKAK---AVIDIGRWNTFKITYPRDADFKG-------KLTLLCDILKDYNVTFQDTDRFTQWDTNVEMNPPIWKWIDLS-----DSQPPRK-ACSLEDLFD----------------------------------------------------------------------------------------------------------------HNFVHLPFQVRYQLEVCISNGYLSEFTM-----------------------------------TREFAVKLS-------EL---GETQAVKLLEHVSAK-----KQ---------VYYDPMKIFDLKF-IKGV----TQAKIPPY-------------------------CCYMHSARITPSTIYYN-------------------------TPTVDISNRVIRRFI-EHADRFLRVRFTDEKL------------------------------------------LGRINSTTD---------------STMDEIFTRIKRALTNGIVI-------GDRRYEFLAFGNS-----------------QFREHGAYFFA--P---------------------------------------------------------LPNLTAANIRAWMG---HFNS----IR--NVAKHAARLGQ-----CF-------------------STTRAI----------A---GCP--V-DVVK---IEDVER-----------------N-G---YNFSDGVGRISRFLAQMSMSELKI----------------------KTPTGE----------------PPSAFQFRL----GGCKGMLAV--SS-E-------------------------AQ-----RQEVHIR-KSQFKF---------------------AAI---------HNG-LEIVRW-----------SQFSMATLNRQLIIVLSTLG----------IPDQVFHAKLHTMLQGL---------DQALESDPQAIY----WLKKYVDPNQM---------------------TLTISQMVLDGFRRS--KEPFLTSVLTLWRAWHL-KYLKEKARIAVDQ--GACLLGCMDETG--LLQGYFHDK-VPGNDASVEEKTAALPEIFVQV----------------------------------S----RPEADKKSEVIEGVC-ILARNPSLHP--GDIRVVRAVNVPQ----------LRH--------------LQDVVVLPQTGD----RDIASMCSGGDLDGDDYIVIWDQDL--LPKD--WFREP-MKYTS---NK----AQ-----------DLDRDV------------------------TVNDITS----------------------------------------------------------------------------------------FFVT--YMKND-FLPRIAHAHLALA---DF-----------LEDGVNEEKCI---------------------------RLAQLHS----DAVDYNKTGIP---------AI---------------LTRN----LEPR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KW-P---HFMEK-FN--------------------------------KPKDRIYH--------------------------------------------SNKILGQLYDAVERIDF--VPS-------------------------------------LEMPFDK-----------------------------RLLNCEI----E---VPDDLLTFAKN-LKGQ------YDDAMRRIMAQHEI-------K-----TE-FEIWSTFVLG---------------HANTSKD---------YKFHEEIGA-------------ISATLRDTFKKQCYE---KVGGR------------------------NFDQLAPLALAMYRVTNEEMSDALNKYRAE---------------------------------------------------------------------------------------N-STTGNKFFHKPTPKIDQLPLI--SFPW----------------------------------------------------------------------I-------------------------------FPHILGKIALG------------HFE-------VPGGIPVV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DND-----------------------PFGL-FTDDLD-P-TSPLPCRCSIVPAASMPLSFSDNVESLEQL-LDFGLSTSGPHELASSTDAAL---------------------------SDVPIEADLSLLDFSDIPKYSQSPSCNGSIGGGCVIQSMDTTTPAMAVD------------------------------------------------------------------------------------------------------------------------------T-IQRSGSPSGGSTG--GGCVVQSADVSNSTFNEVVSEKWVEIVEEEDDLKPTALDKLN--ELLGF----   [1458]
'gi|71000487|ref|XP 754927.1| RNA-directed RNA polymerase Sad-1 [Aspergillus fumigatus Af293] >gi|66852564|gb|EAL92889.1| RNA-di'    M----T-----------------------------QGSRPRSTL----LRERKRSLQPSRQQVPS-------QAPSSGQHVPPVTP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QRS-------QWQQIPQVLQHPS--T-ILCPWRLWESVAVHVFNIPRE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AD-----TYCLWQ-AFSKEGHV---------------------------------------------------------------------------------------FSIDIFEDFHGNRES------RGKIRFKSADSPLHSINWPNPFSRPPPQK-DFWCHGTYPITLSDGKPTFVSITLDL------KRPDVQIQSPLRPNTMYPAEVK---------------LPI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASMDIGVPISETSMLP------MR-----------------------TVGNERNER-AFLVIDLKRRDLSVHFQLPSFKNKPKSASTGETYN---------QYRLSIPFVRLVKIYQTR----------DPKSGKVSHLTFLGS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PA---IYHQRIQETWVTFN-DDMSW-----RESDSWYRQTSVVHNPDELST-LPVSLNRSR---PVIDIGRWNAFRITYPEALSKKDE-----ERFELFCNILNDYNIAIENTTRFSVLDQTQERPPPIWRWIDFA-----DLQGSKKIVSSVEELGD----------------------------------------------------------------------------------------------------------------ETYVHLPFPVRYQLEVCLSHNYLSEFTM-----------------------------------SREFAVKLL-------NL---GESEAVKLLEHVAIK-----EE---------VYHDPMKIFDLKF-AKGS----TRAKIPSY-------------------------CCYMRSARITPTTIYYN-------------------------TPSVDISNRVIRYYI-EYADRFLRVRFTDEKL------------------------------------------LGRINSTID---------------NTMDEVFTRIKRALANGIVI-------GDRRYEFLAFGNS-----------------QFREHGAYFFA--P---------------------------------------------------------LPSLTAANIRAWMG---TFND----IR--NVAKHAARLGQ-----CF-------------------STTRAI----------A---GCP--V-QIRL---IDDVVR-----------------N-G---YTFSDGVGRISKFLAQMAASELKI----------------------RTPSGD----------------PPSAFQFRL----GGCKGMLTV--SP-E-------------------------AQ-----RQEVHIR-KSQYKF---------------------ASV---------HNG-LEIIRW-----------SQYSMATLNRQLIIVLSSLG----------IQDSVFHDKLRAMLQSL---------NESMESDSQALC----WLKKYVDPNQM---------------------TLVVSQMVLDGFRSS--REPFVTSIMRLWKAWHL-KYLKEKAKIVIEK--GANLLGCMDETG--ILRGY-SEW-IPAKGASDEEKLAALPEIFVQI----------------------------------H----HPDT-GKCEVIEGVC-ILARNPSLHP--GDIRVVRAVNVPQ----------LSH--------------LKDVVVFPQTGD----RDIPSTCSGGDLDGDDYLVIWDQDL--VPED--WFRKP-MKYTS---DK----AQ-----------DLDQDV------------------------TVNHITS----------------------------------------------------------------------------------------FFVL--YMKND-FLPRIAHAHLAWA---DR-----------LEDGVNEEKCI---------------------------RLAQLHS----DAVDYNKTGKP---------AN---------------MARS----LQPK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VW-P---HFMEK-KH--------------------------------KPKEMIYK--------------------------------------------SNKILGQLYDAVERIDF--VPS-------------------------------------LEMPFDE-----------------------------RILTCSL----G---VSDDLVQFARD-LKAD------YDAAMHRIMAQHEI-------T-----TE-FEVWSTFVLS---------------HSNMSKD---------YKFHEELGL-------------ISSSLRDMYRKKCYE---KVGGR------------------------SFELLAPLAVAMYRVTHEEMTSALEKCRSK---------------------------------------------------------------------------------------N-HSDG-QLFHKPTPKIDQLPFI--SFPW----------------------------------------------------------------------I-------------------------------LYNILGKIALG------------HYE-----DSEPGSAPTVIA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PATASVDP--------LDPVPGQAVSVHKENSNRTEPTSDSLNGIHED-----------------------PFGL-FEGDQE-SRPSSRPSREAEVSATQ---NRRESIPSLDQL-LDFGLVE---LSLPISSDRLH---------------------------LSAQAPDGFNLLELND-------------------NTALDKPTEGRAEE------------------------------------------------------------------------------------------------------------------------------TDLEKQMSLVSGSTSITGGCI---------------------DIMEEDDVKPSALDMLY--QILDS----   [1440]
'gi|40794967|gb|AAR91037.1| RNA-directed RNA polymerase 2 [Hordeum vulgare subsp. vulgare]'                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGGKTLQVSGFPAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VN-----VHHVKDLLEQIVG-L--------------------------------GKV----------------------------------------------------------------------------CAVK----------------LRPPKNISANSRSFAIVQFETEAHASLV---------------VNAARG--NAL-RSGSNYLKV------------------------RPAERDII----LK-----------------------------PRTALFNLED--------------------------------------------------------------------------------------------------------------------------ATLHFGCLLRERVLS--------V-----------------------LW----SGTGVSVEFGFAMKKIDFCLTYN-L-------------K---------KYKLELSYESIWEIQLYH----PPGS--QKK--F--LLIQVMA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AP---KIYEQNL-WHSGSMYDDPLFNYFRDDTDDQWTRTTDFT---------------------PLASIGQSYILCLELPAD-----------CYLPNIREYFVYYKNHNHDFHCMRGHSY----------------------------------------SSNSCFVPIVKSQ-------------------------------------------------------------------------------------------------YFTDVPYEILFKINNLVQNGILSG-PTL----------------------------------DDNFYSLVSPG-----YV---CIDHIKHALENMSYL-----KK---------TCLNPINWLSEKY-KEIQIS-RHMLTSPNIA-LDD----------DG--------LAYVYRVQITPAKVYFY-------------------------GPEINVSNRVVRNYS-ADLENFLRISFVDEDC------------------------------------------EKLRSTDLSPRSAP-----GNNAS--RTALYNRILSVLSNGITI-------GNKHFEFLAFSSS-----------------QLRDNSAWMFA--S---------------------------------------------------------RTGLSASDIREWMG---NFRN----IR--NVAKYAARLGQ-----SF-------------------SASTET----------L---KVH--KYEVQA---LPEV---T--N------------GTK---YVFSDGIGTISADFADEVSRKCKL-------------------A--R----F----------------TPSAFQIRY----GGYKGVVAI--DP-R---------------------------S----HWKLSLR-SSMSKF---------------------PSE---------NIT-LDVLAY-----------SKYQPCFLNRQLITLLSTLG----------VRDNIFELKQQAAVMQL---------NRLVTEPQAAID----AIELMPM-GEI---------------------TNVVKELLLCGYQPD--VEPYLSMILQTFRASKL-LELKTKSRIFIPE--GRAMMGCLDETR--TLKYG---------------------EVFIQA--S------------------------------------NSANESDKFVVTGKV-VVAKNPCLHP--GDIRILEAVYTPV----------LDH--------------MVNCVVFPQQGP----RPHPNECSGSDLDGDIYFVSWDPDL--IPT---RMVAP-MDYTP---AP----TE-----------TLDHDV------------------------VIEEVHE----------------------------------------------------------------------------------------YFAN--YIVNE-SLGIIANAHVVFA---DK-----------ESLKAESTQCI---------------------------KLAELFS----IAVDYPKTGVP---------AQ---------------IPSK----LHVR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EY-P---DFMEK-LD--------------------------------RAT---YI--------------------------------------------SKGVIGKLYREIKKQSPH---I----------------GHF----TKDV--------ARRS--YDT-----------------------------DLIVDGY----------QDYITEAVW-FKGE------YDFKLGNLMEHYGI-------K-----SE-AEIISGCILK---------------MAKNFTK--SSD----ADAIR---L-------------AVKSLRKEARSWFSD---MS-------------------ADESGDVH--EASYAKASAWYHVTYHPEYYGCYNKI-------------------------------------------------------------------------------------------YE--------------RPHLI--SFPW----------------------------------------------------------------------C-------------------------------VYDKLLHIKQRKSLR--RRLLDLQN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GMRRNNILG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1115]
'gi|15422180|gb|AAK95829.1| putative RNA-dependent RNA polymerase [Diaporthe ambigua]'                                    M----SPPGRS------------PTLPDRGPLAQSSTSIHPFNTQTASIPHRNGGSSRNPPSNV--PPVAGHMAGSLHSNTR-SNV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QRLAPPSSTPHTPNGNSPRPSTSPWGHHPAR--------------------------------------------------------------------------------------RVQNNGAARTNG-------------------------------------------------------------------------------------------------------------------------------------------------------------------ARCLQSSTQNRSADMRAQQNMHQLQQQRDTTA--ALTGAALSAAQKVILYLYGLPKD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IK-----LQEIWESLTASHLSL---------------------------------------------------------------------------------------TRVEIYESDDGERTG------KARVDIE-----------------PPPTRWPTWDGPHNCLTIVKADSSQVSVRYDAV-PHHLDNIRSRIRTPC--HKPIPPKFYQQ------------KFPS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKLVFGMMASESTMWN------LP-----------------------QFSYED----VTLLTDFPKGRFEIGFKVNV--GR-Y------GLK---------VFKMQVDFNHPTKIIWGT-----------RKNGAWGLAMLLPS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PP---KLYGRLPVSHD---DDQSLW-----QEWDLWARQTHISGELHKLKG-IPARLEKPA--GQSVDFGRWTTYYFDL-DS----FL-----SEWGSVCTYLADYNVKIVQVDRFELVNPD---STNAWKLLD-------------STDLTLELLGS----------------------------------------------------------------------------------------------------------------TDAYHLDFPVRYQLEVCISHGLLDEYSI-----------------------------------GAQFLGRLI-------SF---DTDRARMLLEGVAEA-----NR---------QFFEPMEIFDDPK-ILHYWP--NA-RTPPY-------------------------ATLVRRAVITPTAIYFK-------------------------SPCVELTNRILRKYS-DLNDRFLRVQFTDEIT------------------------------------------SGKIFSSQDS--------------TKDDNLFTRVHRVMRNGIVI-------GDRHYRFLAFSNS-----------------QFRENGAFFFC--N---------------------------------------------------------TDHVTCESIREWMG---DFRH----IR--SVGKFAARMGQ-----CF-------------------TTTRQV----------N---GIS--IPKIRQ---IGDIQQ-----------------QTGDHIWNFTDGVGKISPFLATLIANERNL----------------------P----E----------------TPSCFQIRM----GGCKGVVVT--WP-D-------------------------VP-----PSEVHVR-PSQEKF---------------------KAV---------YNG-LEIIKT-----------SAFSHATLNKQVIPVLVALG----------VDKSVFVSMLDSELTEY---------EEALADSMRAGE----LLRSQVDENQT---------------------TLTLAEMV-DTFMDS--EEPFLWTLLRLWKCWVL-KRLKQKFAISVKN--SAMVFGVVDEIG--VLRGH-----SQATEGRRDNNIESLPQIFLQV----------------------------------PVEGSDGKSTTNYEVITGLC-VVGRNPSLHP--GDVRVVEAVDALE----------LRH--------------LKNVVVFPRTGD----RDIPSMCSGGDMDGDDYFVYWDERL--IPLE--WYHPP-LDHDAESSTP----GL-----------DKPEDV------------------------TIEDVTR----------------------------------------------------------------------------------------FFAQ--YMKND-SLGRIATAHFAQA---DQ-----------LSGGVKNPKCI---------------------------ELAKLHS----KAVDYIKSGKP---------AV---------------MQRH----LQPR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KW-P---HWMER-EK--------------------------------KSS---YP--------------------------------------------SVSALGQIYNRIKIEEF--HAA-------------------------------------YEMPFDV-----------------------------RILS-RY----Q---LEDDTLAEAGK-IKEA------YDIAMRRLMGQHEA-------PV----TE-FEIWSTFILS---------------KPRVGSD---------YKLQENVGR-------------EMAALKERFRAECMT---AATGN-----------TQAQEFTFSSSMVNLEKLDRFVAAMYTVTHNEVRAAARERSMP-----------------------------------------------------------------------------------------RPDHDGEPEEV-----QMPLI--SFPW----------------------------------------------------------------------L-------------------------------FHRELARVALG--------------R-----GG--DVRPLQNS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGSLAIDDGEFGVSGDIVSADAVDLEG--------ATHQPLQDVQWNNGGNSTERGDSADDGENGDDFVCTSGGQVVHRGQMLT-LFT--ETGEQVNAQHD-STAQILPT---------ARSVSNHSLVPDDS--TGSSVPA----SPRSE--QIS-----------------------------------------------------------------------EEDED----------------------------------------------YVDFEEV-------------------------------------------------------GDSG---------------------------------------------------HEE-EDALDV------------LARKIGM----   [1483]
'gi|39975737|ref|XP 369259.1| hypothetical protein MG06205.4 [Magnaporthe grisea 70-15]'                                    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEVFLSGLPTEQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LT-----ARSLEQQLTPLILKL--------------------------------------------------------------------------------------------------------------------------------GIGKHDFGCEKAARSKFANLTFRHPEQARLFLRHYGEVPESSTNKISSLPQGQAQPSPFGRDR-------APRSTARLRLLGKPIWCRKSIRAVNPIT--LRGMDESHRRHQEKESKALTG--------HRDQDKHQHGVDFDV--------------------------------------------------------------------------------------------------------------------------MGVACGHYAFVS----------QQ-----------------------LAYFPEREWPWMCKASFTKLNLHVRRSDG-------------------------TIRMRIPLSTIHEIVWYT----HDDR--QGT-----LTLTLDS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VP---WFLTEECTLDDLMAR----------------------IAIGSGKIKENQQNRMQALDEQHAEIVGTCLTYHFNISS------------HSISRDIKMLERKSFTNITRYKLAIWNTP---------------------------HPTLGSFKDKALQLRQELKAATSAS-----------------------------------------------------------------------------------------------INSGKSLPHSHLFVLQALFYNGYLHPATV------------------------------------LEILHQLFRRFYEDRLSG--RTFIAPEAVKSLMDAECIPWPSPY----EDPEYFEVSSLMKWIYEKNEEFQGGFDLRTGQL--RQN----------SN--------LTHIYRVVVTPTRITLH-------------------------GPEIENKNRVLRKYP-KHQDCFVRVQFCDENT------------------------------------------QDIRFSPK----------------ISYDRVYSRFLDVLNRGIQI-------AGRVYNFLGFSHS-----------------SLRTHSAWFSA--PFFDQ-----------------------------------------------------GSQHTHASIIKSLG---EFSS----IQ--CPAKCAARIGQ-----AF-------------------SETPSV----------V---DLR--DHDVEVVTHFPDITNR----------------DGS---RVFSDGVGKISESMMHIIWENIPM-------------------------KKN----------------APTCFQVRW----GGAKGMLAL--DM-T-------------------------LK-----GTKVCFR-DSMTKF---------------------ESD---------DVHQLEICDS----------GSKPIPLVLNRQMIKILEDMG----------TDRSWFMRLQSYRLQEL---------RSITASAYNTWH----FLDAQNVGQAIKL-------------------GKFINFADKHGMDYR--TDDFMRSVVEAVVLREL-RLLKHKARIPVKY--GKTLFGIIDETG--YLREG---------------------EVVISFGFSQ------------------------------------TGEDQPTPPQDGQIVIVTRSPALHP--GDIQIAKQVVPPP-------SHPLSH--------------HINCIIFSQHGQ----RDLPSQLSGGDLDGDIYNVIWDGDA--MPK---ETFDP-ADYPR---VE----AQ-----------DIGRRV------------------------VSADMAQ----------------------------------------------------------------------------------------FFID--FMKTD-HLGVIATRHVILA---DQ-----------LDDGTLSQECR---------------------------TLAGLHS----TAVDFSKSGIP---------AE---------------LKAL----PRAN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KFRP---DFLSPGPITNYHDKGKITLEEYTISEEAEEEEEEGDGPR-YGY---YR--------------------------------------------SEKVLGQLYREIDEEKIWNENI----------------RVA----VDHNK-----PSFWETFIDWA-----------------------------IKSAATV-----GAVSWPVRIDSARR-LKSA------YDDHVRGHMSKYSD-------HPVNPISE-REVFIGAILN---------------KTGVQTHRQRDAS---HKLRDEFER-------------TANHFARQMRMGNEG-------------------PDCVPLTGYMAELGPSAALDLCLACVCVASEQDVPLVASRLGI---------------------------------------------------------------------------------------SKSPSRRAAGRNGRKDGENSELQ--SFRL----------------------------------------------------------------------V-------------------------------AATQFLRELRVKERELGVGEAGGKGG-----GGFQLQIGPALQVGKVV-------NSSVWWLCKGMGIFGSHEFGGKRYPEDVGLKYSKAGELH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1338]
'gi|88182372|gb|EAQ89840.1| hypothetical protein CHGG 06459 [Chaetomium globosum CBS 148.51]'                                    M----ADPMSG------NYQNLLL--------------------KGADNGRLQAQKQARPAT--------------------PASA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VRFPNP------------------------R--------------------------------------------------------------------------------------HVERPSFVR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RPGPAAGQSKPIPTQQA--AVVPPAWASKKSATMIIKPIPAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AS-----PWDIRE-FFEKFGNV---------------------------------------------------------------------------------------VWVEL----DGARVS----HRSAKIRFE-----------------PPPTDVSFFQQGKCKLSIGGSVS---W---ALIKFPRQSDQEPTMTTPG--GNACPTSMV---------------FGP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRLTFGLLIQPTTFMA------KK-----------------------EILKLDGNLELKFTADFRRQKLTVHFPISV--YG-E-------RQ---------YYRIEMKFGIIKSIYRMA----------------SVLVVHLAD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PP---LARKKQTGMDGAGWVDRLVW-----GEDELWYRAVDVGTNSQNPPT-KPVSLDEDP---GIIDFGRWTTYWVDL-DNKS--AQ-----EQWSVIEGHLRDWNIATKTEAIFTRIPST---KPELWDLLADPH-FDVSTAASPTWDNGLILLSA----------------------------------------------------------------------------------------------------------------MTHISLPYEVRYQLEVCISRGILSEYNI-----------------------------------RRDFLEKLFEM-SKPRDL---KPNRARLVLEYAADE-----GK---------PVYNPMELFEDRG-AMAYYP--TTLHIPDY-------------------------CALVRKVTVTPTRIFFS-------------------------TPTVETTNRVVRRYK-DVQDHFIRVQFTDELL------------------------------------------DGRIRAS-DV--------------DRDDELYARVCRVMTQGIRM-------GKWHWKFLAFGNS-----------------QIRENGAFFFCEPE---------------------------------------------------------DGTTTCHSIREWMG---NFDH----IS--SVAKLAARLGQ-----CF-------------------STTRLL----------N---CIS--APRIVK---IPDIES-----------------NDG---FCFTDGVGKISFPLASLVSEAWKI----------------------D----T----------------RPSAFQFRM----GGCKGVLVT--WP-D-------------------------AK-----GTEVHVR-PSQEKF---------------------SAE---------YNG-LEIIRC-----------SQFSCPTLNRQTILILSCLG----------VPDDVFIDMMAGQIASY---------DTAMTNQDRAIE----LLSKYVDGNMT---------------------TTTIATMILNGFMHT--REPFVRTLLQLWRSWSI-KGLKEKARLVVDQ--GAFLLGCVDETG--TLRGH-----SRATEGRNGITQNDLPQIFLQV----------------------------------P----DRKDRGAYKVVTGIC-IVGRNPSLHP--GDIRVVEAVDVPE----------LRH--------------LRDVVVFPLKGD----RDVPSMCSGGDLDGDDFFVIWDPKL--IPPE--WSHPP-MNYTA---PE----PL-----------NESQES------------------------IVNSLAF----------------------------------------------------------------------------------------FFVL--FMKND-RLPLIAHAHLATA---DY-----------EVTGAKHWKCL---------------------------QLASLHS----IAVDYVKTGIP---------AR---------------WNKK----LDPR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KY-P---HFMEK-AK--------------------------------AKS---YR--------------------------------------------STSVLGKLYDMIDKEVFDNRDN-------------------------------------YKLPFDD-----------------------------RILK-RF----E---LGHPLLKEARK-IKTQ------YDISMRRIMGQLEI-------R-----TE-FEIWAAFVMS---------------KPRVGTD---------YKVQEKVGR-------------ESAGLKKQFRDLCLKVVEEHGFN----------------------------RQEFVAAMYKVTWEETRIALHEARQP---------------------------------------------------------------------------------------HVLPDGTVGLRRVTAR--SMPLI--SFPW----------------------------------------------------------------------L-------------------------------FPDDMGKIA----------------L-----GT--ERLPNLME--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LGIVPPSTNPMPKGPNMAQLETEPDLAG--MDYTKTSDGQFIHRGEILH-LFRHNDDGEDGFYYDD-GSDSPDPSGDSAS-DTASKQEQEVKKMADDFATLLDSDASLDAESPIQENADIMQVLSSPKLSDHAAESALLDLLSSDMDTNLDSTPCLTPVRIYAQQPDTVATTETVQSINRSVEEASVAVATDHKDKD-------GAARNPDAASVVSDSNTSSWNRATPPVSEPPAELPVDYIPVSSHRARRGGQRLNQVEL-----------------------------------------WADGAGSGLGKGIVGAPGYALNEREAAAALPAYVDPFAPAKALAVEEVVGGVPDEE-VEYQEDVIEVEAETTLEK-AARFA---------   [1572]
'gi|74830373|emb|CAI39057.1| RNA-dependent RNA polymerase [Paramecium tetraurelia]'                                    M----QQVLKVEFRTQLADEDYSSKIISDTNFNNFKNNK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FL-----TNLLKDCIFDLEGES-----------------------------------------------------------------------------------------------------------------------------------FMQQQNDEVDDDDEGVFSFQSMIEEQEEIQDITLIDASKQRNKINKLQEINQIVEKLEKALSKISKVDIQIYDLKEAPLDAKLDSPLTVTLRMQKKYLCNFLKFHFSIIPNSQPVFMNFKNAQIIDDRMQNQEYSIKIGK---------------------------------------------------------------------------------------------------------------------------IPFTLNELTFSYVTGEHLKDKLPD-----------------------QPINSPINLFLSPYFKFSDLQSQLFKVKAYMMFHCEESKLARKVEFILNILDKFLLKIEVDLVNCQYCHAVT------------DSFGKKIHFKLLC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PP---NYSISLSTKRKFELF----------NMKSDWIRVHNIFSNAYYNK--------------YKNEIERLIIINNTLITAQFTFQQGSKEEMAYKMVIEKLSQYNLMYSDAIDLNLFELEQRKTQWDQLYAL----------------------------------------------------------------------------------------------------------------------------------------IEQSQLSFEQKYNILCVVSQNRITDLDL-----------------------------------LKQLILHITQF----------QRDNHEKILESTFQL----------------FSRYSTDLNFSVRQSELNKKNYLTFKRDLKRCLEDVIIPIDQNEQKR--------VAMIKRVSLTPSGYIFN-------------------------LKLPEETSEIIRQYY-NQLDNFIRLHFEDENL------------------------------------------ETIHGHHY--------------------ITEYYFKSKLSNGLHL-------LGEQFRLLTWSAS-----------------QLRGGSCWIFN----------------------------------------------------------YNRAQISRQNFIDSIG---NFNT----LNMDQVAKNAARLGQ-----NF-------------------SSSKSI------------------DLRQIIVKTQVPDKVG-----------------DNG---KLYTDGIGKISRNLIEMIRVEMNN---------------------------H----------------TISAIQVRY----HGAKGVLLL--ND-D-------------------------LP-----DNTIELR-KSMIKF---------------------NPTLMND--GNYKTM-ISLLDY-----------NKFRGGYLNRQIIILLVTLG----------IQEEVFMQLQREYLHKI---------ANLSAVDSSIYNH---FLVDYNGELQG-----------------LPSIIDNIRMMINANLNEN--NNHYIKRVLDRLKRRGL-MQLRTKSNILMDQ--AARVLGVVDDYD--ILDQG---------------------EVVCIVKQSL---------------------------------------DVNHKYITGEI-IVVRNPCLHP--GDIRKVRALSENEILSRYNMKNPFAE--------------YYNCIVFPCKGN-----SIPADCGGGDLDGDIYFVSWDPKV--IPK---TTEYP-MNYDE---EK----KPA---------VVVSKQI------------QAQGYISAEDFFQENKMIE----------------------------------------------------------------------------------------FLLE--YLNFD-VLGKIDNSHLAIA---DG-----------SPDYAKDPKCI---------------------------RLAELHS----AAVDYVKHGNK---------VE---------------IPNN----LVTK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RW-P---DFMEKD----------------------------------SMV---YE--------------------------------------------STSILGKLYREVLQCINQEPQS-----------------------VLDGYQQEGLPEIDTRFIYKF-----------------QQEDELAQVGDQAKQYQDYYQNEYQQYLTDNICRNALK-CLNH------IFDNFDSLRKMFDL-------T-----NE-YEIYTGYFTN---------------FTQGEGTRLKKKINV-EHVQKRVIL-------------SLVQLKQEIYKTLSA-------------------------------NEEERLAEISIIHFLMMYSPKSHQDQIAKYT----------------------------------------------------------------------------------------------------------------SLKFYHQELEKTINKNEEIYKLFSRLKNKFPQWYRGCSWFF-----------------------------------------------------------------FTLEILSFAQKTNDDSDELI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1331]
'gi|86196450|gb|EAQ71088.1| hypothetical protein MGG ch7g495 [Magnaporthe grisea 70-15]'                                    M----SGNFLA-------------------------RASRQSVRRVATGSHSKGITLFRPRRYA---------SSSAASSTRQSSSGSIGVSAVVAVALAAGLVGYGAAVSLGAGGTVREDTPIIHDSRLPTPKYASLADMNKAIEEIRRDLGDHDIISTDPDDLHAHGYSEWSTVNPTTLPVAVAYPHNTEQVAVIARICNKQRIPLVPYSGGTSLEGNFSAPFGGVSVDFAFMDKIVRFSKDDMDVTVQPSIGWQDLNAQLLKMDTGLFFPIDPGPSAKIGGMVGTNCSGTNAVRYGTMRDWVVNLTVVLADGSVIKTRRRPRKSSAGYNLNGLFVGSEGTLGLVTEGIPLSSLQSFQEELSVAVVTFPSIRDAAAAAAGVMQAGVPVAAMEIMCEVQMRVVSLSGATAPRKWQETPTLFFKFSGTKAGVKENIGKVQQIAKANKGSNFEFAKDEREQKLLWSARKESLWSMLAATQGGPG---------------------------GLFASILGHIGDGNFHESIMYNRGDPVERAKVEGCVKNMVNRALEMEGTCTGEHGIGWGKKESLLVELGAGTVGVMKAIKAALDPHWIIFFAGIEQKNVRMDPPPAPPPPQRSGGLSPTGRGARPFQRSAISHI--CIPVDRWKDYTSMDLQLFGLPMN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IT-----TWEIWR-AFDAQVDV---------------------------------------------------------------------------------------LTIDIFEGRNGS---------MARVRII-----------------PPATDL-----WHGRLQIRRDVQAMVVCRVEI--DPRGFRFHNEIYSPL--NNPVPSEKS---------------IRA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSLSVGLMTDKTCMLV------MG-----------------------TIKPLRNPDDLKLEIKFTKRRINLFFTLALLDTR-DPSKDSYRHF---------RYKVDVQFRNITKLLRVN-----------INEDSCFLLIPLEC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PP---QFFREIDNKRITHNDESLTW-----TSVMDWQRQVHFRDEPQVAED-MPLGLNEEH--TQFMDLGRWTTYRIEL-LT-----------QQWSAMERYLSDYGISTQETSDFDFASPD-DHPTVIWDHLEKP-------PSPESDNYGLEMLFS----------------------------------------------------------------------------------------------------------------STKVQLTWEVRYQLEACISHRMLAEPNI-----------------------------------TLEFLEKLS-------EM---RPTKARIMLEYVVDR-----NV---------KLYNPMQLFKDEG-ASTYWPDITPEELPQY-------------------------CTMTRKVTVTPSTMYLS-------------------------SPMVETTNRVLRHYN-EHKDRFLRVQFTDELP------------------------------------------TGRLHAPNDL--------------GADDEIFSRVYRVLKNGIHI-------GDRHYKFLAFGSS-----------------QMRENSTYFFC--D---------------------------------------------------------AGDVTCDSIRAWMG---RFSH----IR--NVGKYAARLGQ-----CF-------------------STTRSI----------D---RVA--MPWIKT---IPDIEK-----------------N-G---YCFTDGVGKISSLWAVVISENLKL----------------------D----Y----------------IPSAFQFRM----GGCKGVLVV--WE-D-------------------------VK-----GQEIHIR-PSQLKF---------------------ETD---------HSR-LEVIRC-----------SHFSVASLNRQTISVLTSLG----------VKNEVFESMLAEQLAKY---------NRAMEDATAAMT----LLTQYVDENQM---------------------TNTLARLVKAGFMES--HEPFVCTMLRLWRTWSV-KTLKEKARLVVEK--GAFVLGCVDETK--TLHGHFTHIPASPNQRPRLNGNMKLPEIFLQV----------------------------------P----DGPS-RDYKVITGLC-LVGRNPSLHP--GDIRVVQAIDVPQ----------LRH--------------IRDVVVFAQTGD----RDIPGMCSGGDLDGDDFFVLWDERLLPLPSQ--RNYKP-ASYHP---PP----AR-----------ELDREV------------------------TADDLCQ----------------------------------------------------------------------------------------FFVT--YMKNF-SLPRIAHAHLAQA---DK-----------Y--GAKDEKCL---------------------------ELAYLHS----LAVDYPKTGVP---------AA---------------IRPR----LMPN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EF-P---HFMEK-AR---------------------------------GR---YH--------------------------------------------SRKILGKLYDQVKPVNF--HPA-------------------------------------YEMPFDV-----------------------------KILS-LYGELSQHGDLGPKLLREARK-LKTL------YDQSIMRIMGQHEI-------A-----TE-FEVFSAFVLS---------------SRRVGSQ---------YKLGEIVGQ-------------QSATLKTVFREKCIAALETVSGR------------------TGIKPRDIEAFGPFVVAMYKVTDEEIKIALHECKTR---------------------------------------------------------------------------------------GV---------KANPK--SMPLI--TFPW----------------------------------------------------------------------I-------------------------------FDQILVQLVTG--------------K-----SNLPCLTPSKLD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGSMTIDLDHLQLPIRLNDLSYQEIRN-------------------IEYARTRDGHVIHRGVVLNSLFRAGEGGENYDYDLDLQPDTEKPEHRDEEL---THQEPQSSLVTLDA-------AESTTYKPKNENYDLL--------------------------SGIAFTPEILQERIMTSICSASGKQTAASSLATSTTPRVMRLEIESTNEI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GDLIELEQKLPTAKAETAIGRLLEMFSDD   [1952]
'gi|13641451|gb|AAK31733.1| suppressor of ascus dominance [Neurospora crassa] >gi|85074682|ref|XP 964248.1| hypothetical protein'    --------MSGIPNWVEQAQHAILVSPDRSPKDQDARPRHPSRRRSSQQGHRENTPTPRPPSRP---------------TSRPSSS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SPKPPP------------------------R--------------------------------------------------------------------------------------AFRQFS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RGKPASFASLPSLT-QP--VFISREWKCARTAAIRVKDVPPR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AK-----LQDLHD-LFSEYGHI---------------------------------------------------------------------------------------SYIEL----DEDRQDVSDRGRRALIRFE-----------------PPPLSTDFLCRGICRLRIGLVDH---WLPLETVDPKREDRKERTIKTQL--GNTCPQTLY---------------VFP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------STLSFGLLVQPAVFMK------KQ-----------------------SVQTLSSDSFLRLEFDFKRMRLVIKFSLHY--QR-ELSGFRRQNE---------HYKLHIKFGVIKELCRTM----------VGEEHRQALVITLRD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PP---VAYRKRDVSKTFG-EDRLTW-----SENDLWERVVDI-SPGLDVSK-NPVSLAENH---QYIDLGRWLTYWIEL-DQQS--TR------VWDQVQQYLLDWNLRTKLTVFPEPLPNQ---KPKVWDFLDDRYGHDIQQVSSRSWSNDFSLLAA----------------------------------------------------------------------------------------------------------------PPRISLPFDVRYQLEVCISQGIINEHNI-----------------------------------DRPFLEKLMEFCDNDNSF---GKDRARLILEYVADEY---AGK---------RIFDPMELFKDHA-ALAYFP--TSFMIPNH-------------------------CAWVRRVTITPTRIYFS-------------------------TPCVEPTNRVIRQWK-HAQDYFIRIQFTDEVL------------------------------------------EGRIKSG-EA--------------EL--PLFLRVYRVLEKGVAM-------GPWHWKFLAFGNS-----------------QIREAGAFMFC--E---------------------------------------------------------QSNLTGDMMRAWMG---RFSH----IK--VIAKYAARLGQ-----CF-------------------STTRLV----------P---GIP--APRIVT---IPDVE------------------KDG---FCFTDGVGKISPLLAKIVAHDWSI----------------------D----P----------------PPSAYQFRM----GGCKGVLVT--WP-D-------------------------VK-----GMEVHIR-KSQEKF---------------------VAE---------FNG-LEVVRC-----------SQFSTATLNRQIIAVLSSLG----------VPDQVFVDMMEQQLSDF---------NAAMEDKQKATA----ILKTFIDENHM---------------------TPIIAEMLAYGFMGS--QEPFVRTLLQLWRSWSI-KTLKEKARLNVEK--SAFVLGCVDETG--TLKGH-----MKVIEDWKDVSSEKLPQIFLQI----------------------------------P----DDVN-GGYRVITGTC-VVGRNPSLHP--GDIRVVEAVDVPA----------LRH--------------LRDVVVFPLTGD----RDVPSMCSGGDLDGDDFFVIWDPLL--IPKE--RSHPP-MISEP---IA----GK-----------ELATEP------------------------TVNNLIT----------------------------------------------------------------------------------------FFVL--YMKYN-NLPLIAHAHLATA---DA-----------EVEGVKSPKCL---------------------------ELASLHS----MAVDYVKTGVA---------AE---------------FPRR----LDPK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TW-P---HFMEK-NR---------------------------------HT---YH--------------------------------------------SVTALGKLYDMVKRETFDMKEN-------------------------------------YQLPFDN-----------------------------RILK-HT----KCRALRDGTLAKARR-IKSQ------YDTAMRRVMCQLEI-------A-----TE-FEVWTAFVMS---------------KPRVGSD---------YKLQDNVGR-------------ESSALKQHFKDQCKK---EAGGD----------------------------LLSFVSAMYRVTYEEVRIALFEAKQP---------------------------------------------------------------------------------------HVRPDGRLGTRKITPK--TMPLV--SFPW----------------------------------------------------------------------L-------------------------------FWDKLGELA----------------R-----AG--AVLQRRLD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DGSEDMDL--------LSDVPLVSQRRRGKHNASGSSDFMDEHGDPLSYTRTSDGKIIHYGQILN-LFSHDD--EDGDERND-ARDRNSSSEDSTHVSNSSKSSSNLSPVAEEDLLTFESPPASPGVTPASPQVDLL----GPTLTLTKAELAI--GLAGPVATTYTPPPTDEETVICHGHSNRASHLSASSS---SLDPQPLIEETSGENEDLLLDIYSASPPRADGARLASAVGSDVPVKGGPP-------------PVWMEQVIRMGHRIPTPPLDSIAIPNVIGVPQFESPLTGTVVASAIQDPFVSPSPAVATPATSGSGGGWGGGGGGGGG-------------GYIGIGGPINKELVMGLDGGIKEEDREETDEEAEEVELEIDEDPIAVRYAQMAAL----   [1638]
'gi|39970563|ref|XP 366672.1| hypothetical protein MG02748.4 [Magnaporthe grisea 70-15]'                                    M----SGNFLA-------------------------RASRQSVRRVATGSHSKGITLFRPRRYA---------SSSAASSTRQSSSGSIGVSAVVAVALAAGLVGYGAAVSLGAGGTVREDTPIIHDSRLPTPKYASLADMNKAIEEIRRDLGDHDIISTDPDDLHAHGYSEWSTVNPTTLPVAVAYPHNTEQVAVIARICNKQRIPLVPYSGGTSLEGNFSAPFGGVSVDFAFMDKIVRFSKDDMDVTVQPSIGWQDLNAQLLKMDTGLFFPIDPGPSAKIGGMVGTNCSGTNAVRYGTMRDWVVNLTVVLADGSVIKTRRRPRKSSAGYNLNGLFVGSEGTLGLVTEAT--LKLAVIPEELSVAVVTFPSIRDAAAAAAGVMQAGVPVAAMEIMDEVQMRVVNLSGATAPRKWQETPTLFFKFSGTKAGVKENIGKVQQIAKANKGSNFEFAKDEREQKLLWSARKESLWSMLALRKEGQEVFSTDVAVPFSRLADLIEVSKREMDDLGLFASILGHIGDGNFHESIMYNRGDPVERAKVEGCVKNMVNRALEMEGTCTGEHGIGWGKKESLLVELGAGTVGVMKAIKAALDPHWIIFFAGIEQKNVRMDPPPAPPPPQRSGGLSPTGRGARPFQRSAISHI--CIPVDRWKDYTSMDLQLFGLPMN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IT-----TWEIWR-AFDAQVDV---------------------------------------------------------------------------------------LTIDIFEGRNGS---------MARVRII-----------------PPATDL-----WHGRLQIRRDVQAMVVCRVEI--DPRGFRFHNEIYSPL--NNPVPSEKS---------------IRA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSLSVGLMTDKTCMLV------MG-----------------------TIKPLRNPDDLKLEIKFTKRRINLFFTLALLDTR-DPSKDSYRHF---------RYKVDVQFRNITKLLRVN-----------INEDSCFLLIPLEC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PP---QFFREIDNKRITHNDESLTW-----TSVMDWQRQVHFRDEPQVAED-MPLGLNEEH--TQFMDLGRWTTYRIEL-LT-----------QQWSAMERYLSDYGISTQETSDFDFASPD-DHPTVIWDHLEKP-------PSPESDNYGLEMLFS----------------------------------------------------------------------------------------------------------------STKVQLTWEVRYQLEACISHRMLAEPNI-----------------------------------TLEFLEKLS-------EM---RPTKARIMLEYVVDR-----NV---------KLYNPMQLFKDEG-ASTYWPDITPEELPQY-------------------------CTMTRKVTVTPSTMYLS-------------------------SPMVETTNRVLRHYN-EHKDRFLRVQFTDELP------------------------------------------TGRLHAPNDL--------------GADDEIFSRVYRVLKNGIHI-------GDRHYKFLAFGSS-----------------QMRENSTYFFC--D---------------------------------------------------------AGDVTCDSIRAWMG---RFSH----IR--NVGKYAARLGQ-----CF-------------------STTRSI----------D---RVA--MPWIKT---IPDIEK-----------------N-G---YCFTDGVGKISSLWAVVISENLKL----------------------D----Y----------------IPSAFQFRM----GGCKGVLVV--WE-D-------------------------VK-----GQEIHIR-PSQLKF---------------------ETD---------HSR-LEVIRC-----------SHFSVASLNRQTISVLTSLG----------VKNEVFESMLAEQLAKY---------NRAMEDATAAMT----LLTQYVDENQM---------------------TNTLARLVKAGFMES--HEPFVCTMLRLWRTWSV-KTLKEKARLVVEK--GAFVLGCVDETK--TLHGHFTHIPASPNQRPRLNGNMKLPEIFLQV----------------------------------P----DGPS-RDYKVITGLC-LVGRNPSLHP--GDIRVVQAIDVPQ----------LRH--------------IRDVVVFAQTGD----RDIPGMCSGGDLDGDDFFVLWDERLLPLPSQ--RNYKP-ASYHP---PP----AR-----------ELDREV------------------------TADDLCQ----------------------------------------------------------------------------------------FFVT--YMKNF-SLPRIAHAHLAQA---DK-----------Y--GAKDEKCL---------------------------ELAYLHS----LAVDYPKTGVP---------AA---------------IRPR----LMPN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EF-P---HFMEK-AR---------------------------------GR---YH--------------------------------------------SRKILGKLYDQVKPVNF--HPA-------------------------------------YEMPFDV-----------------------------KILS-LYGELSQHGDLGPKLLREARK-LKTL------YDQSIMRIMGQHEI-------A-----TE-FEVFSAFVLS---------------SRRVGSQ---------YKLGEIVGQ-------------QSATLKTVFREKCIAALETVSGR------------------TGIKPRDIEAFGPFVVAMYKVTDEEIKIALHECKTR---------------------------------------------------------------------------------------GV---------KANPK--SMPLI--TFPW----------------------------------------------------------------------I-------------------------------FDQILVQLVTG--------------K-----SNLPCLTPSKLD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGSMTIDLDHLQLPIRLNDLSYQEIRN-------------------IEYARTRDGHVIHRGVVLNSLFRAGEGGENYDYDLDLQPDTEKPEHRDEEL---THQEPQSSLVTLDA-------AESTTYKPKNENYDLL--------------------------SGIAFTPEILQERIMTSICSASGKQTAASSLATSTTPRVMRLEIESTNEI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GDLIELEQKLPTAKAETAIGRLLEMFSDD   [1977]
'gi|89308088|gb|EAS06076.1| RNA dependent RNA polymerase family protein [Tetrahymena thermophila SB210]'                             M----SESLQQQLDKEININQTLNFFQTQL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFILLINKCYINGKITSKNFTTS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LC-----FASIQKYLQEQQHRF--------------------------------KSIKCVSIYTPKKEQQQIGLDTIDDVKEKIKEIQKSIDHNYLNIPQHLKEERYREGQQSLDNDDDSNLLGSEYQFLKNFITKENDDIHLKEEMASFNKIESFCQNVLKNSKNESKINTVNQQKDQYARINSWIIILSGTEQDLEVLNDSKIDVKTKHEKYYFFLKTKHNDNEKKNYLKICTDELSNYAKEQMNFVNIKLLQ-----------------------------VSLGIFELYG--------------------------------------------------------------------------------------------------------------------------GALYYNCQFQFEENI-----------------------------------DYVNTISIYMQNDESEQSVSIVLAYND--------------Y---------QLKIEFPYLYCNEIRFDQ----RGKN--M-------YYFQLVV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PP---KYFVRENSANIQENLD---------QKKNTWIRVDNFFA-HDISNEL------------KRIEFVNNTVICIEIENETVNTFQT----ILKNSFSNVFKDTD-------------------------------------------PIPISNVSQHFPQEPENDLDQQWE------------------------------------------------------------------------------------------------RLLNRYSFNLSYSILTLISHNKLSVVKL------------------------------------REFLDYIDL------QI---RDGKSEYILEKGIQYYYNQKKE---------INRLNFTAFQILF-QDVQRQENYFKIQEIRA-KRD----------VK--------VIATRRVSITPSGLIYN-------------------------LKELELSNRVLRIFQ-DSTDSFIRGTFQDDSL------------------------------------------EN----------------------AKHMKYVSRYFRQKLKSFKV-------LNWEFINFGWSAS-----------------QLRNSSSWFFH--E---------------------------------------------------------TEVLKKQDVITRIG---DFSG----IN--PPAKKSARIGQ-----CF-------------------SSSTPY----------I---LKE--RPNIEF---IDDITTPSAVQEVDANGNICYFRQKK---KVFTDGIGTISQDLIRKISDHLNA---------------------------F----------------FMCAIQVRY----GGAKGVLTI--DY-K-------------------------SDK----KNTIQLR-ESMIKY--------KITD---------EQD---------ELI-IDILDR-----------NKYRFGYLNRQVIILLRSLG----------IENEQFIQAQQEYIEEL---------NKSALKDASIFT----LFNTDYSKDGTR----------------LFPITHLLRSMQTSRIDMA--QDIFCKGVIHTLKKRGF-YILRKKSNIFLKK--SARLMGVIDEYN--VLEQD---------------------EVFAYI--SQ----------------DS---------------------EKSFFQVEGDV-IVVKNPCLHP--GDIRKLKAVTLET----------ISQRLGE--GKINPFKKLRNILIFPQKGK----EPITSQIAGSDLDGDCYFICWDQRF--IPL---EQKEP-FNYDEDDNSQ----KK-----------QISQEQYDIEISKKPNTQFKTKNPVREVIDDNEQMLD----------------------------------------------------------------------------------------FFID--FINNE-NLGKIDNSHLVFA---DK-----------SPLYAEDPKCL---------------------------KLASLHA----QAVDYAKTGIS---------PQ---------------LPKN----LAIK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EY-P---DFMEK-DD--------------------------------KPS---YQ--------------------------------------------SQSILGILYRQVKDQYEKHCKN----------------DIE----GDRSQ-----TFIDNNLIFNP-----------------------------PTFVNEIVDEQENKTYLEQEIDFAIE-ANNQ------WNIEINNLKQFFGA-------Q-----NE-FEIYTGNFSK---------------LIKVERKKKMSA----EIVQQRILS-------------TLLAIKNRFELLFFK--------------NLDEDRDRFYDETNRKKYYSKKCKIRATLWYIICYLRKPEHIVQYAVN---------------------------------------------------------------------------------------FE----------------KDSLLGQTFTFLSQQKYFGE----------------------------------TIIRGNRNPKTIQFFNENNDYVGLSWFI-------------------------------ISNVLLEIKKDNDNYKMNEQKQQKSE-----QQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IKEFEDYKKKFYQNDLNGYHSDEYL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1439]
'gi|50924896|ref|XP 472792.1| OSJNBb0048E02.13 [Oryza sativa (japonica cultivar-group)] >gi|32492169|emb|CAE04828.1| OSJNBb0048E'    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MPTAAAAATASLRVSNIPPS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AV-----AAELLAFFDSAVAVA--------------------------------GGA----------------------------------------------------------------------------FACE----------------IAA-AHRGWLSRGHGTVQFGSAAAAAAA---------------AGLASS--GRLPRFLGALLSV------------------------SPSPVDLL----PR-----------------------------ASDLSLRAAG--------------------------------------------------------------------------------------------------------------------------AGLVVGDRVAERVFE--------A-----------------------AD----AWDGVRAEVIPGKRRVDLYLEHD-S-------------Q---------RYKLEVLFEDMKDCLGCT----LDG------MGA--ILLQLNY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AP---RIHTAISGPAVNSRFMDDRFHACKEDAKFSWVRALDFT---------------------PNYSFGRCSTLVLKLGKS-----------ALVSDILKSLPFSGN-LGELTMNSMDGV----------------------------------------GASSNVVPLVHCP-------------------------------------------------------------------------------------------------RDYSVPYEVLFRLNSLMHMGKIVA-KHV----------------------------------NADLFKALQE-------L---PVDVSRRIFEKMHKL-----ES---------TCYGPLQFIQQEA-YSMKRSHNVLLSNEGEG-EGE----------RK--------LMKCYRVNITPSKIFCF-------------------------GPEEEVTNYVVKHHS-AYASDFVRVTFVDEDW------------------------------------------SKLSSNAISARIEQ-----GFFSKPFKTGLYYRILSILKKGFSI-------GPKNFEFLAFSAS-----------------QLRGNSVWMFA--S---------------------------------------------------------NASLNAGGIRRWMG---HFEN----IR--SVSKCAARMGQ-----LF-------------------SSSRQT----------F---EVL--RWDVEV---IPDI--EITTD------------GSK---YIFSDGIGKISLRFAKRVAHHVGL-------------------D-PT----N----------------LPSAFQIRY----GGYKGVIAI--DP-M---------------------------S----SIDLSLR-PSMKKF---------------------ESE---------SRM-LNITSW-----------SKSQPCYVNREIISLLSTLG----------IRDEIFVAMQQDEMRET---------EEMLTNKEVALS----VLGKLGG-SET---------------------KT-AVKMLLQGYEPS--SEPYLSMILKAHQENRL-TDIRTRCKIHVPK--GRVLIGCLDETG--VLEYG---------------------QVYIRI--TK----------------NSKEQKD-----SNQSYFYND--DGKTATVVGKV-AITKNPCLHP--GDIRVLEAIYDPD----------L--------------VGMVDCLVFPQRGE----RPHPNECSGGDLDGDLYFITWDDKL--IPE---KVDTP-MDYTA---TR----PR-----------IMDHVV------------------------TLEEIQK----------------------------------------------------------------------------------------HFVD--YMIND-SLGAISTAHLIHA---DR-----------SPLKARSPECL---------------------------QLATLHS----MAVDFAKTGAP---------AE---------------MPRT----LRPR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EY-P---DFMER-WE--------------------------------KPM---YI--------------------------------------------SNGVLGKLYRSAMGHMEKSGDS----------------GAL----SSSS--------AQPSPTYDP-----------------------------DLEVPGS----------DEFLQAAEE-YYEL------YEEKLTTLMNYYRA-------E-----LE-DEILTGNIRN---------------KMLYLKRDNKRY----FEMKDRIVA-------------AVDALHREARGWLLS---SR-------------------K-EED-------ASRMASAWYRVTYHPDR--------------------------------------------------------------------------------------------------RRG-------------K-RFW--SFPW----------------------------------------------------------------------I-------------------------------ACDNLLAIKASSQLRRRRQKDDDSTA-----VV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QMDCSA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1136]
'gi|40794965|gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare subsp. vulgare]'                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGGKTLQVSGFPST----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VN-----ADHVKDLLEQIVG-T--------------------------------GNV----------------------------------------------------------------------------FAVK----------------LRPPKNISANSRSFAIVQFQSEAHASLV---------------LNAAQR--NAL-RSGSHYLKA------------------------RYAERDIV----PR-----------------------------PRTTIFNLQG--------------------------------------------------------------------------------------------------------------------------AKLHFGCLLKERVLS--------V-----------------------LW----SGTDVSVEFGFAMKRIDFCLIYN-S-------------K---------KYKLELSYESIWEIQLHR----PPGL--QKK--F--LLIQVQA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AP---KIYEQNI-RLSGSMYDDPLFNYFRDDTDDQWTRTTDFT---------------------PSASIGQSYILSLELPHI-----------CYLPNIREYFVYYEVHNDIFNLQPGYSY----------------------------------------SSNTCFVPVVKSH-------------------------------------------------------------------------------------------------YFTDVPYEILFKINHLVQNGTLSG-PTL----------------------------------DDNFYRLVSPG-----YE---RIDRIKRALEKMSYL-----KK---------TCLNPTNWLSEQY-KKMRRS-R-VLTSPNIT-LDD----------DG--------LVYVYRVQITPAKVYFY-------------------------GPEINVSNRVVRNYA-ADLDNFLRISFVDEDC------------------------------------------EKLRSTDLSQRSAP-----GNNTR--RTALYNRVLSVLSNGITI-------GDKHFDFLAFSSS-----------------QLRDNSAWMFA--S---------------------------------------------------------RPGLSASDIREWMG---NFRN----IR--NVAKYAARLGQ-----SF-------------------SSSTET----------L---KVH--KYEVKE---APDV---T--N------------GTE---YVFSDGIGTISADFADEVSKKCNL-------------------T--R----F----------------TPSAFQIRY----GGYKGVVAI--DP-T---------------------------S----QWKLSLR-KSMSKF---------------------QSD---------NIT-LDVLAY-----------SKYQPCFLNRQLITLLSTLG----------VIDSIFELKQQEAVQQL---------NRMVAEPQAAID----AIELMPM-GEI---------------------TNIVKELLLCGYRPD--VEPYVSMLLQTFRASKL-LELKTRSRIFVPK--GRAMMGCLDETR--TLKYG---------------------QVFIQA--S------------------------------------NSADDRGKSVVTGKV-IVAKNPCIHP--GDIRILQAVHSPL----------LGH--------------MVNCVVFPQLGP----RPHPNECSGSDLDGDIYFVSWDPDL--IPT---RMVAP-MDYTP---AP----TE-----------TLDHDV------------------------MIEEVHE----------------------------------------------------------------------------------------YFTN--YIVNE-SLGIIANAHVVFA---DR-----------QSLKAESTQCI---------------------------KLAELFS----IAVDYPKTGVP---------AQ---------------IPHE----LHVK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EY-P---DFMEK-LD--------------------------------RAT---YV--------------------------------------------SEGVIGKLYREIKKQNPH---I----------------RHF----TKDV--------ATLS--YDT-----------------------------DLIVDGY----------QDYITEAVW-FKEE------YDFKLGNLMEHYGI-------N-----SE-AEIISGCILK---------------MAKNFTK--KSD----ADAIR---L-------------AVKSLRKEARSWFSE---MG-------------------SDESGDGH--KALVAKASAWYHVTYHPQYWGCYNEG-------------------------------------------------------------------------------------------YDH-------------RPHLI--SFPW----------------------------------------------------------------------C-------------------------------VYDKLILIKQKKNIA--RKMLDLQN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RMRRNTILG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1115]
'gi|34913398|ref|NP 918046.1| putative RNA-directed RNA polymerase [Oryza sativa (japonica cultivar-group)] >gi|21328146|dbj|BAC'    ------------------------------MRSPRGGAAAQPSGRRG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DTTAAAAGDLVTTQVSLGGFDAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VA-----AGDLADFLEHEVGLV--------------------------------WRCR-------------------------------------------------------VKTSWTPPDSYPDFALPTAPASAS----------------AAAAPPRYDRVPPHAFVHFARPEGARRA---------------ADLAGE--TRL-ILRGKPLRV------------------------ASAPDSSLRVS-RR-----------------------------SSIAPFRFPD--------------------------------------------------------------------------------------------------------------------------VRLEVGALPSPGAFLA------AW-----------------------RG----PDAGLDLSVDPFDGCCRLVFTRDTAFTFPGFREVAAIRC---------DVKLEFPVRDVLEVRLYR----L--D--C----S--LLLRLAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AP---LVHYRTADDDFHEPVPFDLL-----DDDDPWIRTTDIT---------------------PSGAIGRCGVYRISF-SA-----------RFWPKMDRALDYMRERRVAIVDCGGGWGP-----------------------------RRGLTVRDELEFGEPMQDVFFCL------------------------------------------------------------------------------------------------QHAEGLKFPLLFMVNALVHKGIINQ-HQL----------------------------------TPEFFSLLGR-------S---EENVNVAALRDFWGD-----KF---------PVFDACGRLKKAL-NRVARN----PKLLCS--KVG----------DD--------HAEVRRLVITPTRAYCL-------------------------PPEVERSNRVLRHYH-EVADRFLRVTFMDEGM------------------------------------------QVLNNNVLNSFTAPIVKDLMSNFFQQKTTVYKRVRMLLTEGFHM-------CGRKYSFLAFSSN-----------------QLRDKSAWFFA--E---------------------------------------------------------DRKTTVEAIRKWMG---RFTS-----K--NVAKHAARMGQ-----CF-------------------SSTYAT----------V---TMR--PDEVDE---SFDD-----VV------------HNE---YIFSDGIGKITPDLALEVAERLQL---------------------TD----N----------------PPSAYQIRF----AGFKGVIAVWQGH-G---------------------------D----GTRLFLR-PSMRKF---------------------ESN---------HLV-LEVVSW-----------TKFQPGFLNRQIIILLSSLN----------VPDSIFWQMQETMLSNL---------NNILSDRDVAFE----VLTTSC--ADD---------------------GNTAALMLSAGFEPR--TEPHLKAMLLAIRSAQL-QDLLEKARIFVPK--GRWLMGCLDELG--VLEQG---------------------QCFIRA--TV----------------PSLNSYFV----KHGSRFSST--DKNTEVILGTV-VIAKNPCLHP--GDVRILEAVDVPE----------LHH--------------LVDCLVFPQKGE----RPHANEASGSDLDGDLYFVTWDEKL--IPPGK-KSWNP-MDYSP---PE----AK-----------QLPRQV------------------------SQHDIID----------------------------------------------------------------------------------------FFLK--NMISE-NLGRICNAHVVHA---DL-----------SEYGAMDEKCI---------------------------HLAELAA----TAVDFPKTGKL---------AI---------------MPPH----LKPK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VY-P---DFMGK-ED--------------------------------GQS---YK--------------------------------------------SEKILGRLYRSIQEASNGD--V----------------VSQ----E-VC--------TPNDLPYDI-----------------------------DLEVPGA----------SDFLASAWQ-CKCS------YDAQLSALLSQYRV-------R-----TE-AELVTGHITF---------------LVKNSSK---KQ----GDIKDRLKT-------------AYSALRKEFKSTFES---IA---------------SDQCEIGDDEKN--LLYEMKASAWYQVTYHPKWVEKSRGILG---------------------------------------------------------------------------------------PDGEE-------------IPASL--SFAW----------------------------------------------------------------------I-------------------------------PVDYLARIKLRCHGKVRVEGQKPVER-----LA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AYISERI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1218]
'gi|51989474|gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]'                                    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGVEKRVT-ATVRVSNIPQT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AI-----AKQLFDFFESSIG-K--------------------------------GSV----------------------------------------------------------------------------FACD----------------IFS-EHKNWKSRGHGRVQFETSQSKLQS---------------LSLSEQ--GKL-VFKGHQLIL------------------------TSSFDDII----AR-----------------------------PIELNYRFQK--------------------------------------------------------------------------------------------------------------------------GILHTGILLENDYME--------V-----------------------LE----TWENVKTLIMPERKSLEFWVSHAKG-------------E---------CYRLEVQFGDIIETCECS----LEDE--KT---A--LLLKLKH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AP---KLYQRVSGPGVASKFSSDRYHVCEEDCEFLWVRTTDFS---------------------AMKSIGCSSSPCWEIEDG-----------LLSSDLLSGLPYCNNDVMDLVLDEVGDI----------------------------------------YSASELVPLASFP-------------------------------------------------------------------------------------------------SDLKLPYEILFQLNSLIHTHKISL-GAV----------------------------------KTDLIEVLSK-------L---ELDTAMMILQKMHKL-----QS---------TCFEPVPFIKTRL-HVLGKNSKNQPSSSYSR-LVN----------QN--------MMSVHRVLVTPSKVYCL-------------------------GPELETSNYIVKNFA-LHASDFLRVTFVEEDW------------------------------------------GKLSPNAISMSVEQ-----GIFAKPYRTKIYHRILSILRDGLVI-------GSKRFLFLAFSAS-----------------QLRSNSVWMFA--S---------------------------------------------------------NEHVKAEDIREWMG---CFNK----IR--SVSKCAARMGQ-----LF-------------------STSFQT----------M---EVQ--SPHVEI---LPDI--EVTSD------------GVS---YCFSDGIGKISQAFASQVAQKCGL----------------------S----Y----------------TPSAFQIRY----GGYKGVIAV--DR-N---------------------------S----FRKLSLR-GSMLKF---------------------ESK---------NRM-LNITKW-----------SDAMPCYLNREIVILLSTLG----------VEDKVFEDLLDNHLHLL---------GKMLTTNEAALD----VLESIGG-GDV---------------------KKILMRMLHQGYAPN--LEPYLSMMLQSHFENQL-SDLRSRCRIFIHK--GRVLVGCLDETG--ILNYG---------------------QVYARI--TM----------------TKAELQS-----AQQSFFQKV--DETTAVVRGNV-VVTKNPCLHP--GDVRVLEAVYEVA----------LEE------------KAWVDCIIFPQKGE----RPHPNECSGGDLDGDLYFISWDENL--IPR---QTVTP-MDYTG---RR----TR-----------IMDHEV------------------------TLQEIQR----------------------------------------------------------------------------------------FFVD--YMISD-TLGAISTAHLVHA---DR-----------EPDKALNPKCL---------------------------QLATLHS----MAVDFAKTGAA---------AE---------------MPRF----LKPR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EF-P---DFLER-WD--------------------------------KPM---YI--------------------------------------------SEGVLGKLYRAIVNSSVRSNSD----------------DLG----SVRA--------IQDA--YDH-----------------------------ALLFDGY----------EAFIETAKN-HKET------YLDRMNSLLNYYGA-------E-----KE-VEILTGNLRQ---------------KSVYLQRDNRRY----FELKDRILV-------------SAKSLQKEVKGWFTG---CC-------------------K-EDE-------HKKLASAWYHVTYHPSY--------------------------------------------------------------------------------------------------CEG-------------SANCL--GFPW----------------------------------------------------------------------V-------------------------------VGDILLDIKLHNT--RK---------------I---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1120]
'gi|4138282|emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]'                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGKTIQVFGFPYL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LS-----AEAVKKFLENHTG-N--------------------------------GTV----------------------------------------------------------------------------YALE----------------VKQ-S--KGGRRAFAKVQFANNKSAEFI---------------IDLA-S--KGL-YYGPSYLKA------------------------WEMKTDIV-----Q-----------------------------PRTYVEHMDG--------------------------------------------------------------------------------------------------------------------------VTLNFGCQISDKKFA--------V-----------------------LG----SK-DVSIKFGIGLKKIYFFLSHA-S-------------A---------DYKLQLSYENIWQVVLHR----PYGQ--NAQ--F--LLLQLFG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AP---RIYKR---------LEDSCYSFFKETPDDQWVRTTDFT----------------------PSWIGLSSSLCLEFRNG-----------VQLPNFSESFFYYKESMNQFILQTGFTFS-----------------------------F---------SQKLALVPIVHLP-------------------------------------------------------------------------------------------------EGIELPYKILFKISSLIQHGCFPG-LAL----------------------------------NFNFFQLVDPR-----RR---NIACIEHALEKLYYL-----KE---------CCYDPVRWLTEQY-DEYLKG-RQLPKSPPIT-L-D----------DG--------LVYVRRVVVTPCKVYFC-------------------------GPEVNVSNRVLRNYS-EDINNFLRVSFVDEEW------------------------------------------EKIHSTDLLPRAST-----GNGT---RTDIYERILSTLRNGFII-------GDKRFEFLAFSSS-----------------QLRDNSVWMFA--S---------------------------------------------------------RPGLTANDIRTWMG---DFRQ----IR--NVAKYAARLGQ-----SF-------------------GSSRET----------L---SVG--RHEVEV---IPDVACSL--H------------GTN---YIFSDGIGKISADFAHRVTIKCGL----------------------Q----Y----------------TPSSFQIRY----GGYKGVVAV--DP-Y---------------------------S----SMKLSLR-KSMLKY---------------------ESN---------NIK-LDVLGW-----------SKYQPCYLNRQLVTLLSTLG----------VIDDVLEQKQNEAVDQL---------DAILHDSLKAQE----ALELMSP-GEN---------------------TNILKEMLNCGYMPD--AEPFLSMMLQTFRASKL-LDLRTRTRIFIPN--GRTMMGCLDESR--TLEYG---------------------QVFVQF--S-----------------GAGRRQFF----EESHPFNDSGSANCDFILKGNV-VVAKNPCLHP--GDIRVLRAVDVPA----------LHH--------------MVDCVVFPQKGK----RPHPNECSGSDLDGDIYFVCWDPDL--IPP---RQVQS-MDYTP---AP----TT-----------QLDHDV------------------------TIEEVEE----------------------------------------------------------------------------------------YFTN--YIIND-SLGIIANAHVVFA---DR-----------EPDMAMSDPCK---------------------------QLAQLFS----IAVDFPKTGVP---------AE---------------IPSQ----LRPK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EY-P---DFMEK-PD--------------------------------KPT---YP--------------------------------------------SEKVIGKLFQKVKNKTPQASSI----------------ATF----TRDV--------ARKS--YDS-----------------------------DMIVDGF----------EDYIDEAFY-YKSE------YDNKLGNLMDYYGI-------K-----TE-AEILSGGIMK---------------ASKTFDR--RKD----AEAIG---V-------------AVRCLRKEARAWFKR---RS-------------------DIDD--------MLAKASAWYHVTYHHTYWGLYNEG-------------------------------------------------------------------------------------------LK--------------RDHFI--SFPW----------------------------------------------------------------------C-------------------------------VYDQLIQIKKAKARK--RPVPHLSSL-----GS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLSRKLVIW-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1116]
'gi|83775472|dbj|BAE65592.1| unnamed protein product [Aspergillus oryzae]'                                    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEVFLHHVPAD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LN-----RHGFKRELQPFMKTL----------------------------------------------------------------------------------------------------------------------------------RIQDFICEKPRKKRFGTITFLHVDDAERFLQAHGEKPNP-----------------------------LGGFKSNLKLMGVSVCCKSSRYPPKPFA-------LRTLEHEAQERAKG----------HRERPEESVVFGM----------------------------------------------------------------------------------------------------------------------------QQYSCGRCDFVG----------EQ-----------------------LTYNPELQWSARGTIKFKTRSMIVHVIP--------------------------DCRIRIPLSTIVSLIYST----------DGT-----LTVTLSD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VP---FFFKVIGTSYNSLGI-------------------------------ESSRVRLSNLGNGHDQIVGQCLVYQFKVSV------------VHFRANIEKLKDWEIT-IYRYNLTTARPL----------------------------LCSQAVSVEFHKLLSELAECT----------------------------------------------------------------------------------------------------RNRSVPFGILFQLQALAQNAYLHPTTS------------------------------------RKLAEGLRKRFAEDEAAG--RDPITVDGMRKLFNM--IGWPFPG----DDPRVYEVDFLVATLEANHREIQDGFAYREGLHENTVN--------------------MTKVHRVNVTPTRITLH-------------------------GPEMEPQNRILRKFP-NHHEYFIRVQFCDENG------------------------------------------EDLLFNAN----------------VDYKDIFGRFIDIMTRGIQI-------AGRTYNFLGFSHS-----------------SLRSRAVWFSS--PFVDDN----------------------------------------------------GHMQTYFSIVSAIG---KFSH----IT--SPARCAARIGQ-----AF-------------------TETPFM----------V---PLE--KHGVLVST-IPDLTSP----------------DGS---RVFSDGVGAISREVVASIWADIPL-------------------------KRG----------------NPTCFQIRL----GGAKGMLAA--DS-R-------------------------LR-----TAVIQIR-PSMIKF---------------------DSE---------DMKNLEICNM----------ASRPYPMVLNRQVIKILEDMG----------ASKDWFFQMQNEELTRL---------QSITVSTDKTAR----FLKDKSVAECIGL-------------------YRLYRQCYWTRLNYK--KDGFLRAIVEAVVLREL-RLLKHKARIPVKK--GMTLYGVIDETG--FLQEG---------------------EVYVTF--DR------------------------------------MEGRYAAPPGPGHI-LVTRSPALHC--GDIQRAQNVIPPE-------DHPLRY--------------HRNCIVFSQKGS----RDLPSKLSGGDLDGDLYHVIWDPEL--ESV---ETFAP-ADYPR---PT----SI-----------DIGRDV------------------------RVDDMAA----------------------------------------------------------------------------------------FFVE--FMRSD-ILGMIAIRHMVMA---DQ-----------AASGTRDTSCR---------------------------LLAGLHS----KAVDFSKTGIP---------VN---------------MEDM----PRVN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYRP---DFLAPGPQTRLYNKSKIGLEQHVSHANYDDDDDDADVEEPYRY---YK--------------------------------------------SEKILGKLYRAIDEQSIWRKHV----------------LSE----SETDE-----EFFWNSVIDDC-----------------------------LRRCKSL-----PRTPKEEHLDEAKR-IRAA------YDDAIISAMDTYSD-------HPTKPISE-LEVVIGSIIN---------------RRGVQTRRQRDRS---NKLHEEFDR-------------IATWITSIMRRQEIE-------------------------------DPDPNGLELSLACLYHGIQGSDS-----------------------------------------------------------------------------------------------------------GHRKEVYGELK--SFRV----------------------------------------------------------------------V-------------------------------AACALLAELDHRDKADPKNCFTM-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1188]
'gi|18656898|gb|AAL78034.1| putative RNA-dependent RNA polymerase RDP-1 [Diaporthe perjuncta]'                                    M----SSHHST------------PTTPDRGPSAQPDASAQIHHTQTSSIPDATAKDNNPRISTLRDPAIADDTSDASNRNTQPSVV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RRLPSPLSMSHTSNGNVLGQKVSLSGPIQGR--------------------------------------------------------------------------------------SIQTNASARTFG-------------------------------------------------------------------------------------------------------------------------------------------------------------------PRGHPNPRQNRFMPNRRQQRSPQSLQQRSTPA--PLTGAVLSAAQSLTIDLFGLPTD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IK-----IREIWESMTSNHLNV---------------------------------------------------------------------------------------NRVEIYENFDGKRTG------KARVIIE-----------------PPPIRWPTWSGPDNLITIDRADSSSLQVSLETR-PFY-----PSTRTPC--NRPIPAQFCQK------------KLLP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKLVFGMMASESAMLN------MP-----------------------QFSYED----VVLLTKFSKRQFELQFTVNL--GR-Y------GCK---------AFKSQIDFSHPTKIIWGR-----------RENGAWALAMLLPS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PP---KLYGRLPVSHD---DEQTLW-----QEWDLWARQTNISSEMHKLRD-LPAKLEKQT--WKSIEFGRWTTYYLDM-ES----SL-----SEWESVRTYLADYNVKILQVDHFDLVNPG---LSNAWKLLDN------------SAEMTLELLGS----------------------------------------------------------------------------------------------------------------TQSYHLDFPVRYQLEVCISHGLLSEYGV-----------------------------------NAQFLEKLI-------SF---ETDRARMMLEGVAEA-----NK---------QFFEPMEMFDDPR-ILHYWP--NA-RIPPY-------------------------ATLVRRAVITPTTIYFK-------------------------TPCVELTNRILRKYS-DLNDRFLRVQFTDEVT------------------------------------------FGKIFSSQDS--------------NKDDNLYTRVHRVMQNGVII-------GDRHYKFLAFSNS-----------------QFRENGAFFFC--E---------------------------------------------------------TDHVTCASIRNWMG---DFRH----IR--SVGKFAARMGQ-----CF-------------------TTTRQV----------N---GIS--IPKIRQ---IGDIQR-----------------RSGDNIWNFTDGVGKISVFFARMIASERDL----------------------P----E----------------TPSCFQMRM----GGCKGVVVV--WP-D-------------------------IP-----ANEVHIR-PSQEKF---------------------KAV---------YNG-LEIIKT-----------STFAHATLNKQVIPVLIALG----------VDDAVFVRMLDDELKEY---------DEALADSMKAGE----LLRSQVDENQT---------------------TLTMAEMV-DTFMDS--EEPFLWTLLRLWKCWVL-KRLKQKFAISVKN--SAMIFGVVDETG--VLRGH-----SQDTEGKGFNNIESLPQIFLQV----------------------------------PIEGSDGKSTTNYEVITGIC-VVGRNPALHP--GDVRVVEAVDVPE----------LRH--------------LKNVVVFPKTGD----RDVPSMCSGGDMDGDDYFVYWDERL--IPSE--WDHPP-LDHDADSSTP----GL-----------DSPADV------------------------TNGDVTR----------------------------------------------------------------------------------------FFAQ--YMKND-SLGRIATAHFAQA---DQ-----------LAGGVKHPKCI---------------------------ELAKLHS----KAVDYIKSGKP---------AV---------------MKRH----LQPR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NW-P---HWMER-DK--------------------------------KSS---YH--------------------------------------------SRGALGQIYDRIKIEEF--HAA-------------------------------------YEMSFDT-----------------------------RILS-RY----Q---LEEDTLAKASE-IKAA------YDIAMRRLTGQHEA-------PV----TE-FEIWSTFILT---------------KPRVGSD---------YKLQENVGR-------------EMAALKARFRAVCME---AVTGD-----------EQTPTCASASSKVNLEKLDRFVAAMYTVTHNEVRAAVRERSKP-----------------------------------------------------------------------------------------RPDDEGDLEEI-----QMPLI--SFPW----------------------------------------------------------------------L-------------------------------YHRELARVALG--------------R-----GG--DVRPLRKP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VC-----------ADPAAANIESEPSGDGALSEEIDQEG--------ETQLSLQKVRSKKDGYVIDRGESVETGKVGEDYVRTSSGQVVRRGQLLT-LFT--DTGEEVQGAQS-TIAPATPP---------AENNSGNPLVEDDG--TGSSYPA----SPRSE-HEAE-----------------------------------------------------------------------GEDEE-----------------------------------------------IEFEEV-------------------------------------------------------DGAN---------------------------------------------------DGEEEDALEI------------LARKIGM----   [1484]
'gi|8248473|gb|AAF74208.1| RNA-dependent RNA polymerase [Arabidopsis thaliana]'                                    ------------------------------MGS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EGNMKKSVVTQVSIGGFGES----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-----AKQLTDYLEDEVGIV--------------------------------WRCR-------------------------------------------------------LKTSWTPPGSYPNFEI----ADTS----------------NIPSIDEYKKVEPHAFVHFAVFESAGRA---------------MDAAGQ--CNL-ILDGQPLKV------------------------SLGPKNPYSLNQRR-----------------------------RTTVPYKLAG--------------------------------------------------------------------------------------------------------------------------ITLEIGTLVSRDDFFV------SW-----------------------RA------EGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAVINC---------DYKLELLVRDIQTVRQYK----TLHG--F----V--LILQLAS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SP---RVWYRTADDDIYDTVPGDLL-----DDDDPWIRTTDFT---------------------QVGAIGRCHSYRVLI-SP-----------RYENKLRTALDYFRMRRVQ--EERVRWPP-----------------------------R----IRNEPCFGEPVSDHFFCI------------------------------------------------------------------------------------------------HHKEGISFEIMFLVNSVLHRGVFNQ-FQL----------------------------------TERFFDLLRN-------Q---PKDVNIASLKHLCTY-----KR---------PVFDAYKRLKLVQ-EWIQKN----PKLLGSH-EQS----------ED--------ISEIRRLVITPTRAYCL-------------------------PPEVELSNRVLRRYK-AVAERFLRVTFMDESM------------------------------------------QTINSNVLSYFVAPIVKDLTSSSFSQKTYVFKRVKSILTDGFKL-------CGRKYSFLAFSAN-----------------QLRDRSAWFFA--E---------------------------------------------------------DGKTRVSDIKTWMG---KFKD-----K--NVAKCAARMGL-----CF-------------------SSTYAT----------V---DVM--PHEVDT---EVPD-----IE------------RNG---YVFSDGIGTITPDLAGEVMEKLKL-------------------D-VH----Y----------------SPCAYQIRY----AGFKGVVARWPSK-S---------------------------D----GIRLALR-DSMKKI---------------------FSK---------HTI-LEICSW-----------TRFQPGFLNRQIITLLSVLG----------VPVEIFWDMQESMLYKL---------DRILVDTDVAFE----VLTASC--AEQ---------------------GNTAAIMLSAGFKPK--TEPHLRGMLSSVRIAQL-WGLREKSRIFVTS--GRWLMGCLDEAG--ILEHG---------------------QCFIQV--SK----------------PSIENCFS----KHGSRFKET--KKDLEVVKGYV-AIAKNPCLHP--GDVRILEAVDVPQ----------LHH--------------MYDCLIFPQKGD----RPHTNEASGSDLDGDLYFVAWDQKL--IPPNR-KSYPA-MHYDA---AE----EK-----------SLGRAV------------------------NHQDIID----------------------------------------------------------------------------------------FFAR--NLANE-QLGTICNAHVVHA---DR-----------SEYGAMDEECL---------------------------LLAELAA----TAVDFPKTGKI---------VS---------------MPFH----LKPK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LY-P---DFMGK-ED--------------------------------YQT---YK--------------------------------------------SNKILGRLYRPVKEVYDEDAEA----------------SSE----E-ST--------DPSAIPYDA-----------------------------VLEIPGF----------EDLIPEAWG-HKCS------YDGQLIGLLGQYKV-------Q-----KE-EEIVTGHIWS---------------MPKYTSK---KQ----GELKERLKH-------------SYNSLKKEFRKVFEE---TI---------------PDHENLSEEEKN--ILYEKKASAWYHVTYHPEWVKKSLELQD---------------------------------------------------------------------------------------PDESS-------------HAAML--SFAW----------------------------------------------------------------------I-------------------------------AADYLARIKIRSREMGSIDSAKPVDS-----LA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KFLAQRL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1196]
'gi|15229153|ref|NP 190519.1| RDR6 (RNA-DEPENDENT RNA POLYMERASE 6); nucleic acid binding [Arabidopsis thaliana] >gi|6899955|emb'    ------------------------------MGS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EGNMKKSVVTQVSIGGFGES----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-----AKQLTDYLEDEVGIV--------------------------------WRCR-------------------------------------------------------LKTSWTPPGSYPNFEI----ADTS----------------NIPSIDEYKKVEPHAFVHFAVFESAGRA---------------MDAAGQ--CNL-ILDGQPLKV------------------------SLGPKNPYSLNQRR-----------------------------RTTVPYKLAG--------------------------------------------------------------------------------------------------------------------------ITLEIGTLVSRDDFFV------SW-----------------------RA------EGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAVINC---------DYKLELLVRDIQTVRQYK----TLHG--F----V--LILQLAS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SP---RVWYRTADDDIYDTVPGDLL-----DDDDPWIRTTDFT---------------------QVGAIGRCHSYRVLI-SP-----------RYENKLRTALDYFRMRRVQ--EERVRWPP-----------------------------R----IRNEPCFGEPVSDHFFCI------------------------------------------------------------------------------------------------HHKEGISFEIMFLVNSVLHRGVFNQ-FQL----------------------------------TERFFDLLRN-------Q---PKDVNIASLKHLCTY-----KR---------PVFDAYKRLKLVQ-EWIQKN----PKLLGSH-EQS----------ED--------ISEIRRLVITPTRAYCL-------------------------PPEVELSNRVLRRYK-AVAERFLRVTFMDESM------------------------------------------QTINSNVLSYFVAPIVKDLTSSSFSQKTYVFKRVKSILTDGFKL-------CGRKYSFLAFSAN-----------------QLRDRSAWFFA--E---------------------------------------------------------DGKTRVSDIKTWMG---KFKD-----K--NVAKCAARMGL-----CF-------------------SSTYAT----------V---DVM--PHEVDT---EVPD-----IE------------RNG---YVFSDGIGTITPDLADEVMEKLKL-------------------D-VH----Y----------------SPCAYQIRY----AGFKGVVARWPSK-S---------------------------D----GIRLALR-DSMKKF---------------------FSK---------HTI-LEICSW-----------TRFQPGFLNRQIITLLSVLG----------VPDEIFWDMQESMLYKL---------NRILDDTDVAFE----VLTASC--AEQ---------------------GNTAAIMLSAGFKPK--TEPHLRGMLSSVRIAQL-WGLREKSRIFVTS--GRWLMGCLDEAG--ILEHG---------------------QCFIQV--SK----------------PSIENCFS----KHGSRFKET--KTDLEVVKGYV-AIAKNPCLHP--GDVRILEAVDVPQ----------LHH--------------MYDCLIFPQKGD----RPHTNEASGSDLDGDLYFVAWDQKL--IPPNR-KSYPA-MHYDA---AE----EK-----------SLGRAV------------------------NHQDIID----------------------------------------------------------------------------------------FFAR--NLANE-QLGTICNAHVVHA---DR-----------SEYGAMDEECL---------------------------LLAELAA----TAVDFPKTGKI---------VS---------------MPFH----LKPK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LY-P---DFMGK-ED--------------------------------YQT---YK--------------------------------------------SNKILGRLYRRVKEVYDEDAEA----------------SSE----E-ST--------DPSAIPYDA-----------------------------VLEIPGF----------EDLIPEAWG-HKCL------YDGQLIGLLGQYKV-------Q-----KE-EEIVTGHIWS---------------MPKYTSK---KQ----GELKERLKH-------------SYNSLKKEFRKVFEE---TI---------------PDHENLSEEEKN--ILYEKKASAWYHVTYHPEWVKKSLELQD---------------------------------------------------------------------------------------PDESS-------------HAAML--SFAW----------------------------------------------------------------------I-------------------------------AADYLARIKIRSREMGSIDSAKPVDS-----LA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KFLAQRL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1196]
'gi|4138343|emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]'                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CIEHALEKLYNL-----KE---------CCYDPVRWLTKQY-DEYLKR-RQLPKSPSIT-L-D----------DG--------LMYVRRVLVTPCKVYFL-------------------------GPEVNVSNRVLRNYS-EDIDNFLRVSFVDEEW------------------------------------------EKIFSMDLLPRANR------NGI---RTDIYERILSTLQNGLVI-------GAKKFEFLAFSSS-----------------QLRDNSVWMFA--S---------------------------------------------------------RPGLTAYDIRTWMG---DFQQ----IR--NVAKYAARLGQ-----SF-------------------GSSRET----------L---SVG--RHEIKY---IPDV--EV--H------------GTN---YVFSDGIGKISADFAHRVAKKCGL----------------------Q----H----------------TPSAFQIRY----GGYKGVVAV--DP-Y---------------------------S----PMKLSLR-KSMLKY---------------------ESN---------NTK-LDVLGW-----------SKYQPCYLNRQLVTLMSTLG----------VKDEVFKRKQNEAVAQL---------DAILHDSLKAQE----ALDLMSP-GEN---------------------TNILKEMLNCGYLPD--AEPFLSMMLQTFRASKL-LDLRTRTRIFIPK--GRSMMGCLDESR--TLEYG---------------------QVFVQF--T-----------------GAGGRQFY----EESHHFNDSGSANYNFILKGNV-VVAKNPCLHP--GDIRVLKAVDVPA----------LHH--------------MVDCVVFPQKGK----RPHPNECSGSDLDGDIYFVCWDPDL--IPP---RQVQP-MDYTP---AP----SI-----------QLDHDV------------------------TIEEVEE----------------------------------------------------------------------------------------YFTN--YMVND-GLGVIANAHVVFA---DR-----------EPNMAMSDPCI---------------------------ELAQLFS----IAVDFPKTGVP---------AE---------------IPSQ----LRPK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EY-P---DFMEK-PD--------------------------------KTT---YH--------------------------------------------SEKVIGKLFREVKDKTTQASSI----------------TTF----TRDV--------ARRS--YDT-----------------------------DLEVDGF----------EDYIDEAFD-YKSE------YDKKLGNLMDYYGI-------K-----TE-AETLSGGIMK---------------ASKTFDR--RRD----AEAIG---V-------------AVRSLRKEARTWFKR---RS-------------------DIDD--------LLAKASAWYHVAYHPTYWGCYNEG-------------------------------------------------------------------------------------------LK--------------RDHFI--SFPW----------------------------------------------------------------------C-------------------------------VYD---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [775]
'gi|24935275|gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]'                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGKTIQVFGFPNG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VS-----AEEVKKFLERLTG-S--------------------------------GTV----------------------------------------------------------------------------YAIK----------------VRQPK--KGGPRVYAIVQFTSERHTRLI---------------ITAA-A--ERL-YYGRSYLKA------------------------FEVEQDIV----PK-----------------------------PRASLHTISG--------------------------------------------------------------------------------------------------------------------------LKMFFGCQVSTKKFL--------T-----------------------LW----SAQDVCVSFGIGMRKLHFSFSWY-Q-------------K---------DYRLELSYENIWQIDLHS----PQGR--SSK--F--LVIQVIG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AP---KIFEKED-QPIN--LLFGIMDFYSDGSDEQWIRTTDFT---------------------SSSCIGQSTAFCLELPVH-----------LNVPDFRENFANYAEHRASSFLIESGSSY-----------------------------S---------SNANTLVPVVDPP-------------------------------------------------------------------------------------------------PGFSLPFEILFKLNTLVQNACLSG-PAL----------------------------------DLDFYRLLNQK-----KY---DRALIDHCLEKLFHL-----GE---------CCYEPAHWLRDEY-KKWISK-GKLPLSPTIS-L-D----------DG--------LVYMYRVQVTPARVYFS-------------------------GPEVNVSNRVLRHYS-KYINNFLRVSFVDEDL------------------------------------------EKVRSMDLSPRSST-----QR-----RTKLYDRIYSVLRDGIVI-------GDKKFEFLAFSSS-----------------QLRENSAWMFA--P---------------------------------------------------------IDRITAAHIRAWMG---DFDH----IR--NVAKYAARLGQ-----SF-------------------SSSRET----------L---NVR--SDEIEV---IPDV--EIISL------------GTR---YVFSDGIGKISAEFARKVARKCGL-------------------T--E----F----------------SPSAFQIRY----GGYKGVVAV--DP-N---------------------------S----SKKLSLR-KSMSKF---------------------ESE---------NTK-LDVLAW-----------SKYQPCYMNRQLITLLSTLG----------VTDSVFEKKQREVVDRL---------DAILTHPLEAHE----ALGLMAP-GEN---------------------TNILKALILCGYKPD--AEPFLSMMLQNFRASKL-LELRTKTRIFISG--GRSMMGCLDETR--TLEYG---------------------QVVVQY--S--------------------------------DPMRPGR----RFIITGPV-VVAKNPCLHS--GDVRVLQAVNVPA----------LNH--------------MVDCVVFPQKGL----RPHPNECSGSDLDGDIYFVCWDQEL--VPP---RTSEP-MDYTP---EP----TQ-----------ILDHDV------------------------TIEEVEE----------------------------------------------------------------------------------------YFAN--YIVND-SLGIIANAHTAFA---DK-----------EPLKAFSDPCI---------------------------ELAKKFS----TAVDFPKTGVA---------AV---------------IPQH----LYVK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EY-P---DFMEK-PD--------------------------------KPT---YE--------------------------------------------SKNVIGKLFREVKERAPPLISI----------------KSF----TLDV--------ASKS--YDK-----------------------------DMEVDGF----------EEYVDEAFY-QKAN------YDFKLGNLMDYYGI-------K-----TE-AEILSGGIMR---------------MSKSFTK--RRD----AESIG---R-------------AVRALRKETLSLFNA---SE-------------------EEEN--------ESAKASAWYHVTYHSSYWGLYNEG-------------------------------------------------------------------------------------------LN--------------RDHFL--SFAW----------------------------------------------------------------------C-------------------------------VYDKLVRIKKTNLGR-----RQRQET-----LE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLDHVLRFG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1107]
'gi|2330856|emb|CAB11093.1| SPAC6F12.09 [Schizosaccharomyces pombe] >gi|19114207|ref|NP 593295.1| hypothetical protein SPAC6F12.'    M----AVSLNDFISVKLKRYSRESPWERLRVPYRNKKQKKWASVHNNEAQLHSANKRNDNCL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IQRSSTWRLGDMITLVIKDIPVT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WLSNEGGK-----LYNLWE-PLHDYGTI--------------------------------EFMK-------------------------------------------------------INEPLNGQTST------TAIVQFA-----------------PPPKVPFWEPNGKINVKGVDLAVQIDI---------------------------------------------------------TAHRSHISRQVFSKNSF-----------------------------RSDQLVKIPL--------------------------------------------------------------------------------------------------------------------------SSFKLGQVYDER-IVP------LF-----------------------GVDCGITVTESNLLVYFNFKKLCVLFDASF----------DKQIE---------TFRLDFDFHSIIGDVGTD----YYDD--HIS-----LVFRFRF--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SP---LIFRKSK--NATESRVQTFW-----TASHLWRRHYDILPFNVSPTTASPIELLNC----HNAPIGRCNVLVLSF--SIRDESDK----DDIAFLLHNLEKFNLKSQLDKVVFHLVPDYKHRCSLI---------------------------------------------------------------------------------------------------------------------------------------------NDKEIEEEIAYLLQACLSKNLLSEIDL------------------------------------PIILANLK-------KL---SKERAKKFLRLILTS-----KT---------ALINPSELDFTKS-------------FVFYD-LSS----------AS--------SIHIKKLYVTPTTLRIV-------------------------EDSLEAGNRVIRNFK-DFANRFMRVQITDEYY------------------------------------------KQKIRGGSDG--------------FRNEKLYSRIQQLLTYGIKV-------GNQIYEFLAFGNS-----------------QLREHGAYFFA--S---------------------------------------------------------GSDLNAKQIREWMG---DFSE----IN--SVSKYAARMGQ-----CF-------------------STTKEI----------N---RFC---VDISL---QDDI------------------VRNN---HCFTDGVGMASLSVIRRLSLEVKN-------------------H-D-----M----------------FPSAFQFRM----GGYKGVLSL--AP-P-------------------------TKLEYHQGNLVFPR-RSQDKF---------------------KSF---------HST-LEVIKI-----------SRFSNAHLNMQLITLLEGLG----------VEKTVFLELTRSQLSKM---------NESINSKQKSIL----MLRDNVDEYHS---------------------TLIIADFIQAGFLER--DDAFTENLLNLYYEWVL-RLIKEKQKVSVPK--GAYLLGVADETG--TLKGH------------YDDAVLSVPEIFIQI--TD----------------TSTSFGSYSTG------------KLKTRVIVGLC-IVARNPSLHP--GDVRVCKAVRCDE----------LMH--------------LKNVIVFPTTGD----RSIPAMCSGGDLDGDEYTVIWDQRL--LPK-I-VNYPP-LLESS---PK----KSI---------DFLEGKP------------------------LIDSVKE----------------------------------------------------------------------------------------FFVN--YIKYD-SLGLISNAWKAWAHDHDN-----------NPEGIFGNVCL---------------------------ELAEMHS----KAVDFAKSGVA---------CK---------------MQAK----YHPK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RY-P---DFMQK-TK--------------------------------TRS---FR--------------------------------------------SETAVGKIFRYAARFQRESGRP----------------AT-----YNPI--------MNTV--YDP-----------------------------CMKLPRF---------KTEYLNVAEE-VKKH------YDNDLRSIMARFDI-------S-----TE-YEVYTAFILF---------------KDDLAKTVNE------YGLREEVSF-------------QFDLLKKKYTQEYLE---KCALS---------------NQSAFDSSEYEERINSAVAATYDVTYDQRVKSVGNGT-----------------------------------------------------------------------------------------------------------TEVLI--SFPY----------------------------------------------------------------------L-------------------------------FSSRLCQLSRKAMLTANNF-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1215]
'gi|15223906|ref|NP 172932.1| RDR1 (RNA-DEPENDENT RNA POLYMERASE 1); RNA-directed RNA polymerase/ nucleic acid binding [Arabidop'    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGKTIQVFGFPNG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VS-----AEEVKKFLERLTG-S--------------------------------GTV----------------------------------------------------------------------------YAIK----------------VRQPK--KGGPRVYAIVQFTSERHTRLI---------------ITAA-A--ERL-YYGRSYLKA------------------------FEVEQDIV----PK-----------------------------PRASLHTISG--------------------------------------------------------------------------------------------------------------------------LKMFFGCQVSTKKFL--------T-----------------------LW----SAQDVCVSFGIGMRKLHFSFSWY-Q-------------K---------DYRLELSYENIWQIDLHS----PQGR--SSK--F--LVIQVIG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AP---KIFEKED-QPIN--LLFGIMDFYSDGSDEQWIRTTDFT---------------------SSSCIGQSTAFCLELPVH-----------LNVPDFRENFANYAEHRASSFLIESGSSY-----------------------------S---------SNANTLVPVVDPP-------------------------------------------------------------------------------------------------PGFSLPFEILFKLNTLVQNACLSG-PAL----------------------------------DLDFYRLLNQK-----KY---DRALIDHCLEKLFHL-----GE---------CCYEPAHWLRDEY-KKWISK-GKLPLSPTIS-L-D----------DG--------LVYMYRVQVTPARVYFS-------------------------GPEVNVSNRVLRHYS-KYINNFLRVSFVDEDL------------------------------------------EKVRSMDLSPRSST-----QR-----RTKLYDRIYSVLRDGIVI-------GDKKFEFLAFSSS-----------------QLRENSAWMFA--P---------------------------------------------------------IDRITAAHIRAWMG---DFDH----IR--NVAKYAARLGQ-----SF-------------------SSSRET----------L---NVR--SDEIEV---IPDV--EIISL------------GTR---YVFSDGIGKISAEFARKVARKCGL-------------------T--E----F----------------SPSAFQIRY----GGYKGVVAV--DP-N---------------------------S----SKKLSLR-KSMSKF---------------------ESE---------NTK-LDVLAW-----------SKYQPCYMNRQLITLLSTLG----------VTDSVFEKKQREVVDRL---------DAILTHPLEAHE----ALGLMAP-GEN---------------------TNILKALILCGYKPD--AEPFLSMMLQNFRASKL-LELRTKTRIFISG--GRSMMGCLDETR--TLEYG---------------------QVVVQY--S--------------------------------DPMRPGR----RFIITGPV-VVAKNPCLHP--GDVRVLQAVNVPA----------LNH--------------MVDCVVFPQKGL----RPHPNECSGSDLDGDIYFVCWDQEL--VPP---RTSEP-MDYTP---EP----TQ-----------ILDHDV------------------------TIEEVEE----------------------------------------------------------------------------------------YFAN--YIVND-SLGIIANAHTAFA---DK-----------EPLKAFSDPCI---------------------------ELAKKFS----TAVDFPKTGVA---------AV---------------IPQH----LYVK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EY-P---DFMEK-PD--------------------------------KPT---YE--------------------------------------------SKNVIGKLFREVKERAPPLISI----------------KSF----TLDV--------ASKS--YDK-----------------------------DMEVDGF----------EEYVDEAFY-QKAN------YDFKLGNLMDYYGI-------K-----TE-AEILSGGIMR---------------MSKSFTK--RRD----AESIG---R-------------AVRALRKETLSLFNA---SE-------------------EEEN--------ESAKASAWYHVTYHSSYWGLYNEG-------------------------------------------------------------------------------------------LN--------------RDHFL--SFAW----------------------------------------------------------------------C-------------------------------VYDKLVRIKKTNLGR-----RQRQET-----LE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLDHVLRFG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1107]
'gi|88179598|gb|EAQ87066.1| hypothetical protein CHGG 08319 [Chaetomium globosum CBS 148.51]'                                    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEVFLRNLPPH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LT-----HGALHEQLKQSLGPL----------------------------------------------------------------------------------------------------------------------------------NITDYMVEKQRGKKTGNITFLREAHGTAFLQRHGEEPIHQPRGPRSR---------------------HPPTRARLSLMGRDVFCKLSNKKPHELT-------LRTIEHEASQR-------------NHEAPAEPPTKTLEA--------------------------------------------------------------------------------------------------------------------------TELNCGYHTLND----------GK-----------------------LTFTPEWTTLERCLVKFAKRALTITLTMR-------------------------DVQLRIPFQSIVELVWWH----------NGS-----LALTLSW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AP---TILATRLPDGELTNTLSSLT-----------------LSPGSSQKRADQRYRLPAIDPDHGRISPYCLVYHFQVLNAITRHTN-----SDFQNEMLRLTRQELFHVTRSEFSFHRPI------------------------------AVRFSDAMTSLRSQLAEQN----------------------------------------------------------------------------------------------------TTGTLPFGLLFLLQALMANSYLHPTTI------------------------------------SALAQKLAQRFEKARKVGDTQPPVSVDAFKKLFNW--IDYPMPD----GDPTMFEVDGILEYLEKEERLIRESSAHRSRMRETQN---------------------RALIFRAVVTPSRITLH-------------------------GPEPEPMNRVLRKYP--DHSYFIRTQFCDENG------------------------------------------QDLFFNAR----------------VSLDSIYDRFKSVLSNGIQV-------AGRVYKLLGFSHS-----------------SLRAHSAWLSA--PFFHQ-----------------------------------------------------GQVQIPTLIVTGLG---NFDK----IK--SPARRAARIGQ-----AF-------------------SETPWA----------I---DLV--AHSVEVWE-IDDIV------------------RNE---EVFSDGVGKLSQDVARLVYDVIPR-------------------------SKG----------------FPTCFQIRQ----AGAKGMLAI--DP-G-------------------------LG-----GKVICIR-PSMSKF---------------------DST---------DKQ-LEICDM----------ASNPMPMVLNRQLIKILEDMG----------APNQWFLNLQSRELQRL---------RTISSTVYNTAS----FLRAQRIGESIRL-------------------HKFLRQIETMGLDYR--RDDFLRGAVEAVLLSEL-RLLKHKARIPVRN--GMTLFGIMDETG--FLKEG---------------------EVYVTF--DP------------------------------------EEDRHSQPPGPGRV-LSSSAIASSS-------------------------------------------------ASGGE----RSPSNQLSGGDLDGDVFHIIWDPAV--VNAV--RTFKP-AAYPR---VQ----PL-----------ELDRPV------------------------TPEDIAA----------------------------------------------------------------------------------------FFVD--FMRTD-HLGVIATRHMILA---DQ-----------REKGTLDGDCK---------------------------KLAELHS----AAI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TIHDKSAIDMEEHFAPRGDDDDDDDSGPR--HQY---YR--------------------------------------------SDKILGQLYRAVEEQKIWAEDI----------------KRI----VQPGN-----LPFWSELLACL-----------------------------KSRVARI-----GPVEWSHRSDEAHR-ILRA------YEDAVYGLTIDCAD-------QPYQPLRE-LEVFVGFILN---------------KSGDQTHRQRDRS---VKLKDGFDK-------------IAAWITREMRKPTSI----------------------------SGYTSELDALELCLACLTIGCEKTYRQLR--------------------------------------------------------------------------------------------------------PGHRRSAQDIE--SFKI----------------------------------------------------------------------V-------------------------------AASALTRELATLEKGKGGQAYTYGGG-----GSVGVAGGRVGRH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1176]
'gi|51989472|gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]'                                    ------------------------------MGS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EGSEKDLVVTQISVGGFDND----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VN-----AKMLSEYLEEQVGQV--------------------------------WRCR-------------------------------------------------------LKISATPPDSYPTYDV-----DAA----------------RVHRMKDYEKVVPHAFVHFASSESAKYA---------------LAAAGG--NGL-ILGKKPLIV------------------------SLGPENPYRLNQRR-----------------------------RTTMPFKFSD--------------------------------------------------------------------------------------------------------------------------VSVEMGVLVSKDDFVV------GW-----------------------RG----PRTGVDFFVDPFNGACKILFTKDTAFSFRGEAKHAIIKC---------NFKIEFMVREINEIKKFK----DFTS--L----V--ILLQLAS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SP---LVFYRTADDDIEESVAFDLL-----DDDDQWIRTTDIT---------------------GSGAIGRCNTYRISI-RP-----------RNGPSFEKAMAYFSFHRVPMVEMCNRKML-----------------------------R----VRDEPDFGVSMSDPFFCF------------------------------------------------------------------------------------------------QN-EGISFKVMFLVNAVLHKGIVNQ-HQM----------------------------------TNEFFYLLRS-------H---QEEVNLAALKHMFSY-----KW---------PVNDAIQKLVGIQ-KWLLKN----PKLLERT-GEL----------DD--------IVEVRRLVITPTKAYCL-------------------------PPTVELSNRVLRNYK-HVADRFLRVTFMDEGM------------------------------------------RNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSRGFHL-------CGRKYSFLAFSAN-----------------QLRDRSAWFFA--E---------------------------------------------------------DPKIRVPGIISWMG---RFSN-----R--NVAKCAARMGQ-----CF-------------------SSTYAT----------V---EVP--SSEVNS---ELPD-----IE------------RNG---YVFSDGIGMISADLALEVAEKLHL-------------------S-VN---------------------PPSAYQIRY----AGCKGVVACWPTK-N---------------------------D----GILLSLR-PSMKKF---------------------DSN---------HTI-LEICSW-----------TRFQPGFLNRQIVTLLSSLD----------VKDGIFWEMQKEMISGL---------NKMLVDSDVAFD----VITASC--AEA---------------------GNTAAIMLSAGFKPQ--SEPHLRGMLSSIRASQL-GDLRNKARIFVPS--GRWLMGCLDELG--ELEQG---------------------QCFIQV--SS----------------PSLENCFI----KHGPKFSDI--KKNLQVVKGLV-VIAKNPCLHP--GDVRILEAVDVPG----------LHH--------------LYDCLVFPQKGD----RPHSNEASGSDLDGDLYFVTWDENL--IPPSK-KSWIP-MNYEP---AE----VK-----------QLGRQV------------------------NHMDIID----------------------------------------------------------------------------------------FFSK--NMVQE-SLGEICNAHVVHA---DL-----------SEFGALDEKCL---------------------------KLAELAA----LAVDFPKTGKL---------VT---------------MPFD----LKPK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MY-P---DFMGK-EE--------------------------------FQS---YK--------------------------------------------SKKILGKLYRQVKDVCDTEGEV----------------SAG----L-EL--------VPNDIPYDS-----------------------------SLEIPGS----------TVFMGDAWN-CKCS------YDGQLHGLLGQYKV-------N-----RE-EEVVTGHIWS---------------MPKYSAK---KQ----GELKERLKH-------------AYNMLRKEFRNVFER---MD---------------PDFDLLPDDEKN--DMYERKASAWYQVTYNPHWVARSLELQL---------------------------------------------------------------------------------------PDAVS-------------STVML--SFAW----------------------------------------------------------------------I-------------------------------AADYLARINIRHRGLQYSDSTKPINS-----LG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYLVDNI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1197]
'gi|17227102|gb|AAL38011.1| putative RNA-dependent RNA polymerase [Phomopsis sp. CMW 5588]'                                    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HKLKH-LPASLVKPV--GQSVEFGRWTTYYFDI-NSSF--SL-----SEWESVRTYLADYNVKTVQVNRFELVTPG---PSNAWRLLDN------------SAEMTLELLSS----------------------------------------------------------------------------------------------------------------TNTYHLDFQVRYQLEVCISHGLLDEYSV-----------------------------------NAQFLDKLN-------SF---DADRARMMLEGVAEA-----SI---------QLHEPMKIFDDPK-VLHYWP--NA-RVPPY-------------------------ATLVRRAVITPTTIYFK-------------------------TPCVELTNRILRKYS-DLNDRFLRVQFTDEIT------------------------------------------FGKIFSSQDS--------------NKDDNLYIRVHRVMQNGISI-------GDRHYRFLAFSNS-----------------QFRENGAFFFC--E---------------------------------------------------------TDHVTCDSIREWMG---DFRH----IR--SVGKFAARMGQ-----CF-------------------TTTRQV----------N---GIS--IPNIRK---IDDIER-----------------QTGDHTWNFTDGVGKISNFFAKLIASERDL----------------------P----E----------------TPSCFQMRI----GGGKGVLVV--WP-D-------------------------VP-----PSEVHVR-PSQEKF---------------------KAV---------YNV-LEIIKT-----------FAFSHATFNKQVIPVLVALG----------VDNSVFVSMLDDELREY---------DEALADSMKAGE----LLRSQVDENQT---------------------TLTMAEMV-DTFMDS--KEPFLWTLLRLWKCWIL-KRLKHKFAISVKK--SAMVFGVVDEIG--VLRGH-----SQATEGRGYNSIESLPQIFLQV----------------------------------PIEGSDGRSTTNYEVITGIC-VVGRNPSLHP--GDVRVVEAVDVPE----------LRH--------------LKNVVVFPKTGD----RDIPSMCSGGDMDGDDYFVYWDERL--IPTE--WDHPP-LNHDAGSST------L-----------DKPADV------------------------TIEDVTR----------------------------------------------------------------------------------------FFAQ--YMKND-SLGRIATAHFAQA---DQ-----------LSGGVKNPKCI---------------------------ELAKLHS----MAVDYIKSGRP---------AV---------------MKRH----LQPR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KW-P---HWMEK-EK--------------------------------KSN---YR--------------------------------------------SYSALGKIYDRIKIEEF--HAA-------------------------------------YEMPFDA-----------------------------RILS-RY----Q---LEADTLAKASK-IKAT------YDIAMRRLMGQHEA-------PV----TE-FEIWSTFILS---------------RPRVGSD---------YKLQENVGR-------------ELAALKLRFRAECME---AVTGN-----------IQTEGFAPASSVVNLEKLDRFVAAMYTVTHNDVRAALRERSMP-----------------------------------------------------------------------------------------KPNGEGGSEEI-----QMPLI--SFPW----------------------------------------------------------------------L-------------------------------FHRELARVALG--------------R-----GG--DVRPLQKS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VWLNRGESQQTRDRDVAVEDAEFEIPGDTALPDAIDLEV--------RTQQAVGDVQSNKEGYTTERGDSGADGEIGDDCVRTSTGQVVHRGQMLA-LFT--ETGEEVQGQQR-SMTPDISPAGTQG-LQSADSVSNNSLVADDS--TGSSCPA----SPRSERREVV-----------------------------------------------------------------------EEEED-----------------------------------------------IEYEEV-------------------------------------------------------DGAG---------------------------------------------------YEEVEDALEA------------LARKLGI----   [1122]
'gi|46109400|ref|XP 381758.1| hypothetical protein FG01582.1 [Gibberella zeae PH-1] >gi|42544625|gb|EAA67468.1| hypothetical pro'    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEVICRNVPLD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LS-----EDNFKRELLPFMKAL----------------------------------------------------------------------------------------------------------------------------------NISDFYCEKPRRKSQAWIKFLSAQDGSAFLARHGKQRRCENHGKENI----DPSNPLNNFTGSHIFRSVPRDIARLHILKTAVFVEQSTKPVDKYA-------IAHLKHEREKKK-------QSTTTSNNKGRHAPEKAFQV--------------------------------------------------------------------------------------------------------------------------SAISCGGNTFHGPNEVITFVDHHK-----------------------LLFRPEA-----VTGKFTSQWLTIQVEH--------------------------AHRMDFHNETIQDLIATR--------------SDMSITLVLTE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PP---KMYTYRPPTFERS-------------------------------MQEWSRVHGLHAWGLPADCTLSCLVYRIYFYDT-----------ISFDQVLVTLKNKNILAITNHDLPSVRWI------------------------------EIGAESNHTIGRQTLVEKSKNL------------------------------------------------------------------------------------------------LTSGRVHFALLFQVQALVWNNFINPASG------------------------------------IKLLDLLECVIEDHKKRKV-AVPVTTDAMKKLFQT--IPYPCPG----TEPKELDVVSIMTNIMDAEYEARKDDPERDRIYGGKLP----------PN--------QIWVFKALVTPTRLLLD-------------------------GPEAESKNRVLRKYA-DYNDYFLRVLFCEEGG------------------------------------------QDLRFHPK----------------VDNEPIYSQFRRMMDHGIQI-------AGRKFDFLGFSHS-----------------SLRSHSAWFSA--PFIDKD----------------------------------------------------RQLQSPEAILQALG---DFRD----IR--VPAKCAARIGQ-----AF-------------------SETPYA----------V---PIF--ENNIVPRY-IPDVKSE----------------DGS---RVFSDGVGTISQEALEAIWPYLSM-------------------------NSA----------------APTCLQIRW----GGCKGMLSL--DT-R-------------------------LE-----GKVFCIRQESMMKF---------------------KSE---------DTGELGICDT----------ASKPLRLVLNRQMIKILEDMG----------TRDEWFFELQNNALDIL---------RNVTADATNTSS----FLEHQAIGINMGL-------------------PRLVKQLEKMDIDYR--RDKFLKAAVEHVVLREL-RLLKHKARIPVDN--GVTLFGIMDETG--FLKEG---------------------EVYVTY--DK----------------TYGRNNSR---------------GIKSTLTDGEI-IVTRSPALHP--GDIQLVKQVTPPQ-------GHSLRS--------------LQNCIVFSQKGK----RDLPSMLSGGDLDGDIYNIIWDPEA--MPS---RVFRP-ADYPR---VT----PQ-----------PLDRQV------------------------EPKDIAD----------------------------------------------------------------------------------------FFIN--FMRTD-ILGVIATRHVILA---DY-----------NDLGSIDRDCI---------------------------ALAELHS----TAVDFSKTGIP---------VN---------------VKAL----PRAP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RFRP---DFLATAPPLKLYDKGQLA---HIGEDDEMDDADDMARTK-TNY---YQ--------------------------------------------SEKILGQLYRNVDEKKIWDEDI----------------HRR----INTAG-----PSVWDQLLTIV-----------------------------ENEAIKY----KLDIDWKRQSQEAWK-IRGL------YESSIEDKRWHFSE-------NPRVPLTE-VEVFCGFILN---------------KRGAQTRRQGDAS---IKLKEEIDR-------------TMTWIVKQIRDRGVG--------------DGAETLSTVTEADGTTSRWREDVVELCWACVAVSCIKKDNAPELYHG----------------------------------------------------------------------------------------------------------NGELE--SFHI----------------------------------------------------------------------V-------------------------------AASCLVRELNNLARKMETAAGGGFVG-----VGCDGRSGRGGRGGKNG-------IECCLMEIKDMDMDTGMSTEGLCASDDLRQERALNARIHGGSDSVECVSEEHRLDFAQTNTWIVNSKLPDSLAKTIEHQKNKNQFPNRVDPYPSAVPWFSEEDRNRLSNKALLAISAAPRDSNTGVHGRANQLKKIRVPGMRNMTINRDLWQVKASYTRMASLKRNAFTPLLLVATMMTISDKLSAWKCLRYVGI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1467]
'gi|74830367|emb|CAI39056.1| RNA-dependent RNA polymerase [Paramecium tetraurelia]'                                    MNFYNNQVKQVSEEIRNNPNNKFLMQYRLKNVEKSGASKMSALELATQIEKQIQQKFDDVQLLRVDVNEQQEFIITSVYENNDQNNKYNRFMDVQFLKDILQVEELLQDEEDEDYEDIDNEVVTDYKFQQLKQAIDCFFEFSKDLDQ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VK-----QMQLENKFKSIIGNT----------------------------------------------------------------------------------------------------------------------------------------------------------------------ANKEQKLQIKILVQCKGSQVVHLHQEKLFLNGPEKDPAFIDLISQNHFVNPDITNMMNSNLIKV--------------------------------------------------------------------------------------------------------------------------------------------------------------------QSFSIGMLQFIQ-----------------------------------------EQQQLQLQQFFTSAQFQRQMSMPYQIYIKETKGNEKCLQLILGFMHQFSIRIDIDLTLCQTVYQQD---------------QMSFYFKMLS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PP---SCYAAYHGKWKYENN----------LIKSQFVKVDNIFLNHLVISE-------------KINEIQRLLFLNNTTILVKLD--------QNSDYFRQKLQSFHVINAIDYPVAHIKLQNDISYSRL--------------------------------------------------------------------------------------------------------------------------------------------MNSKYLNFSLRFNILAAISQNKLNKQKS--------------------------------------IQELIETCESGYKKLSEKQTQDLNGIFEQTFNTFC--------------KVTSNLSLIDEKETEKKNENHLRYFKNVFKRTQQDFIELRDPTMR----------LVYTRRVSMTPSGILYF-------------------------NKQPEVTSGILRQHY-NIVEYFLRVHYEDENQ------------------------------------------DMVLNIPY--------------------ITQTYYYNFMFPTLKI-------LGQHFELFTWSSS-----------------SLRAGTCWFIDFN----------------------------------------------------------GAGKQRTDIIKSIG---NFTN----LKYDEIAKNAARLGQ-----NL-------------------STSISV----------D---CVG--GINILI---KDDLVD-----------------KNN---KLYTDGIGKISQDLIDQIRQKMRV------------------------NSKI----------------KISAIQIRY----EGAKGLLVL--DE-S-------------------------LE-----QKTIVLR-RSMIKY---------------------NPA------KGYPNK-IQILDF-----------NKFRGGYLNRQIIILLLTLQ----------VNEKAFQELQDEYLKKI---------EDLQMKDASIYK----YFSVDYCDEQIDLPNI----------------MDALRAYINIGME----DNILCQGVLSKLKQRGL-LQLRKKTSILVEK--AARVLGVIDEHN--LLQPN---------------------EIYCLV--QD----------------------------------ENNDTQVEPENIQGEV-LVTRNPCLHP--GDIKKLNAISTQEILKRNGSKNPYSQ--------------LINCLVFPACGN-----SLPCQIAGGDLDGDLYFICWDNRL--LPP---VQAKS-MVYDNKKPNQVQYKKIDFRENNQRFHENVDKNF------------------------DTKNMFD----------------------------------------------------------------------------------------FLYF--YLNSE-TLGLIDNSHLAWA---DK-----------SDKKANDPNCL---------------------------ELAELHS----DAVDFVKTGKQ---------VF---------------LDVK----LLSK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IF-P---DYMEKEQ---------------------------------SVT---YE--------------------------------------------SQTIIGKLYRQVAQMGIQQDNS-------LSQGLGFKQNNLPKIEYKLLYNFDKLIAVCKQIKQDCKITINLEEKKKEQNELQQEVQEEVIIEELIQLIQKY-----IDDNFKRHLDSALK-LILL------IFESIFGITQTFAV-------K-----SE-FEIYSGNFSS---------------LQKGDGLYQKKKLNV-EKYQKRIIA-------------LIGQLHQEVERKLQA------------------------------LSEIERLQRISLINFILTYSPN--------------------------------------------------------------------------------------------------------------------------SHPY-------------------------------------------------------------PTYTILGEFISQLMKQIECFDAWKQLLNIHSIWYRGVGQYLFWKDLQKIFKSDEEELI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1367]
'gi|28881256|emb|CAD70515.1| related to RNA-directed RNA polymerase [Neurospora crassa] >gi|85110327|ref|XP 963405.1| hypothetic'    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEVYIRNLPQG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LS-----ERSLTAHLKPFMDNL----------------------------------------------------------------------------------------------------------------------------------GIRHYDCNKRSNQPFGKVIFITAREALNFIAKH----------------------------------------PRLYIMNQQAECRVSKPQPKDLKNLVNGILYEAEEKERRKKA------WEENTSNNARPARTPTLALDA--------------------------------------------------------------------------------------------------------------------------DVLDCGHWSYIDGN---------------------------------LTFITEWSSSLRVSAKFAKHDLVITSLA--------------------------ESQVSIPYRYIHELVWSN----------GGH-----VAVTLAH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AP---TFLSPPIPLLR---------------------------------PGQPKRMRLEACDSNHAKVSKFCLVYHFKVSDKHLKQNQGSYRGSDFRTAINGLNEQEMFWVTHYTFAIQTTS-----------------------------PQDAYAVAVDRLRAALLEYE----------------------------------------------------------------------------------------------------GRDTLPYSLLFNLQALVYMSYLHPTTV------------------------------------LKLAKRLADMFETARRSGQRQDPISVDAFKDLFKT--IDWPSPSLSSAEELAQFEVEGIIEHLKKTEKRMREGYTLRLNEEIPPG---------------------LTKIYRALVTPTRIELH-------------------------GPELEAKNRILRKFP-EHQDHFLRVQFAEEDG------------------------------------------QDLFFNSA----------------VSMDAIYQRFKDVLTNGISV-------GGRVYRFLGFSHS-----------------SLRAHSLWLAA--PFIYD-----------------------------------------------------GKLQLASNIIEDLG---DFRN----IM--SPARRAARIGQ-----AF-------------------SETPYS----------V---SLY--DHGIDVIR-QRDVK------------------RNE---RVFSDGVGIISQGALEVIHREIPE-------------------------SKG----------------YPNCLQVRW----AGAKGMLAL--DA-R-------------------------LT-----GRQICIR-DSMEKF---------------------RSR---------DEEHLEICDM----------ASKPIPLMLNRQMIKILEDMR----------APAQWFLELQEKELQRL---------RAITDNVQNVAT----FLKLQCVGDSVHL-------------------SQFLKDLDKMNIDYR--RDQFLRGIVEAVVLREL-RLLKHKARIPVPY--GVTLFGVMDETG--LLREG---------------------EVYVTF--ET------------------------------------VDGRFKDPPTAGPV-VVTRSPALHP--GDIQIAHNAIPPA-------GHPLRE--------------LKNCIVFSQNGE----RDLPSQLSGGDLDGDTFNVIWDQSI--VATL--RTFAA-ADYPR---VE----PL-----------KLNREV------------------------ESKDMAD----------------------------------------------------------------------------------------FFVE--FMKAD-HLGVIAVRHMILA---DE-----------RNEGTLDADCL---------------------------KLAALHS----KAVDFSKSGIH---------VD---------------ITEL----PRPP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MYRP---DFLVNGPDIKIHDKSTIDMEEQYLR-QDDDDGDDTPR---YKY---YK--------------------------------------------SDKILGRLFRAVDEKKIWTKNI----------------KLE----VPSGG-----VPFWKEVESSL-----------------------------LKRVRGI-----GQVQWQHRLDEARR-ICES------YEDGIKDAMVEFAD-------SPTQPLKE-LEVVMGFILN---------------KKGIQSRRQRDKS---SKLSDAFAR-------------ITKMVTNVLRPSTPP----------------------------EEATSELHALELCLACFYVAGEKKSQPQE--------------------------------------------------------------------------------------------------------SWKRQIATGLE--SFRL----------------------------------------------------------------------V-------------------------------AGSALLLEIKAQEQKIRLRHAARSGGFVGVRGGSRVAGRGGRGGHRQPARVDVNTAAEAATLQTADTGAAFGLGSPSSTSAPTTPSSGSNYTPSSGSDMRDGIFNSPTGPYAGYQPELVHAQAGARTAGTSGGQVPSAAPANMPVRLAPADKVAHLAALYAQMQIYQRH-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1351]
'gi|15237051|ref|NP 192851.1| RDR2 (RNA-DEPENDENT RNA POLYMERASE 2); RNA-directed RNA polymerase [Arabidopsis thaliana] >gi|7267'    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVSETTTNRSTVKISNVPQT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IV-----ADELLRFLELHLG-E--------------------------------DTV----------------------------------------------------------------------------FALE----------------IPT-TRDNWKPRDFARVQFTTLEVKSRA---------------QLLSSQ--SKL-LFKTHNLRL------------------------SEAYDDII----PR-----------------------------PVDPRKRLDD--------------------------------------------------------------------------------------------------------------------------IVLTVG-FPESDEKRF------CA-----------------------LE----KWDGVRCWILTEKRRVEFWVWES-G-------------D---------CYKIEVRFEDIIETLSCC----VNGD--ASEIDA--FLLKLKY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GP---KVFKRVT-VHIATKFKSDRYRFCKEDFDFMWIRTTDFS---------------------GSKSIGTSTCFCLEVHNG-----------STMLDIFSGLPYYREDTLSLTYVDGKTF----------------------------------------ASAAQIVPLLNAA------------------------------------------------------------------------------------------------ILGLEFPYEILFQLNALVHAQKISLFAAS----------------------------------DMELIKILRG-------M---SLETALVILKKLHQQ-----SS---------ICYDPVFFVKTQM-QSVVKKMKHSPASAYKR-LTE----------QN--------IMSCQRAYVTPSKIYLL-------------------------GPELETANYVVKNFA-EHVSDFMRVTFVEEDW------------------------------------------SKLPANALSVNSKE-----GYFVKPSRTNIYNRVLSILGEGITV-------GPKRFEFLAFSAS-----------------QLRGNSVWMFA--S---------------------------------------------------------NEKVKAEDIREWMG---CFRK----IR--SISKCAARMGQ-----LF-------------------SASRQT----------L---IVR--AQDVEQ---IPDI--EVTTD------------GAD---YCFSDGIGKISLAFAKQVAQKCGL----------------------S----H----------------VPSAFQIRY----GGYKGVIAV--DR-S---------------------------S----FRKLSLR-DSMLKF---------------------DSN---------NRM-LNVTRW-----------TESMPCFLNREIICLLSTLG----------IEDAMFEAMQAVHLSML---------GNMLEDRDAALN----VLQKLSG-ENS---------------------KNLLVKMLLQGYAPS--SEPYLSMMLRVHHESQL-SELKSRCRILVPK--GRILIGCMDEMG--ILEYG---------------------QVYVRV--TL----------------TKAELKS-----RDQSYFRKI--DEETSVVIGKV-VVTKNPCLHP--GDIRVLDAIYEVH----------FEE------------KGYLDCIIFPQKGE----RPHPNECSGGDLDGDQFFVSWDEKI--IPS---EMDPP-MDYAG---SR----PR-----------LMDHDV------------------------TLEEIHK----------------------------------------------------------------------------------------FFVD--YMISD-TLGVISTAHLVHA---DR-----------DPEKARSQKCL---------------------------ELANLHS----RAVDFAKTGAP---------AE---------------MPYA----LKPR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EF-P---DFLER-FE--------------------------------KPT---YI--------------------------------------------SESVFGKLYRA-VKSSLAQRKP----------------EAE----SEDT--------V--A--YDV-----------------------------TLEEAGF----------ESFIETAKA-HRDM------YGEKLTSLMIYYGA-------A-----NE-EEILTGILKT---------------KEMYLARDNRRY----GDMKDRITL-------------SVKDLHKEAMGWFEK---SC-------------------EDEQQ-------KKKLASAWYYVTYNPNH--------------------------------------------------------------------------------------------------RDE-------------KLTFL--SFPW----------------------------------------------------------------------I-------------------------------VGDVLLDIKAENA--QRQSVEEKTSG-----LV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1133]
'gi|67524519|ref|XP 660321.1| hypothetical protein AN2717.2 [Aspergillus nidulans FGSC A4] >gi|40743829|gb|EAA63015.1| hypotheti'    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEVFVHNLPGN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FT-----KDSLKHQLEPFMRSL----------------------------------------------------------------------------------------------------------------------------------AITDYDCEKPRKKRFGHILFLNQSDGKRFLAHHGEERRAGRR----------------------------RPLSKLNLLGSQVLCKPSHRKPDEFD-------LRALENEVQERTNP----------SRIIEEEGGSVSFIL--------------------------------------------------------------------------------------------------------------------------STASCGYTVFVDNE---------------------------------FSYVPEVELQQYDSIIFRKRNITVHLGN--------------------------TPRIKIPLNTIYELVWSK----------HGS-----LLLTLVT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VP---LFFQ----------------------------------------CDGHSRIRLTSPGGPQAAVVGQCLVYQFQVVSSS----------SNLRARMGKVAEYDLS-VINYEFKTVHNF-------------------------------DSWQSQLTLLRDRLGEYT----------------------------------------------------------------------------------------------------RAGTLPFGILFQLQALVYNGYLPPNIV------------------------------------LRLTRKLASITKTRKVQG--RRPISVNSMKRLFNL--IDWPSPF----GDPEEFSIKRLLEVITGNDKDLGEGASEAEALFQPAPH--------------------LAHIHRVVVTPSRITLH-------------------------GPETEPLNRILRRFP-NHHEYFIRVQFCDENG------------------------------------------EDIYFNPR----------------INNSLIFARFKNVFANGFQI-------AGRTYTFLGFSHS-----------------SLRSRSAWFSA--PFIDDD----------------------------------------------------GSLQSYFTIIKAIG---RFSE----IT--SPARCAARIGQ-----AF-------------------SETPFA----------V---NLK--ENGIRVLR-IPDVQ------------------VGG---RVFSDGVGTISAKAVDIIHGVLPP-------------------------RNG----------------APTCFQIRL----GGAKGMLSL--DP-R-------------------------LR-----GSKICIR-PSMTKF---------------------QTD---------DQVNVEICGS----------GSKPIPLFLNRQVIKILEDMG----------VDREWFMTLQELRIEQL---------RKATATTKNTAT----FVKGQSVADCVKL-------------------YRLFLLFHNLKLDYK--KIPFLRAVVEAMVLREL-RLLKHKARIPVHK--GITLYGVMDETG--FLNEN---------------------EVFVTY--QA-------------------------------------MDRLAAPPQNCRL-LVTRSPALHN--GDIQYPYNVVPPK-------GHPLQQ--------------QRNCIVFSQKGT----RDLPSQLSGGDLDGDLYNIIWDPAA--APK---RVFTP-ANYPR---NP----PL-----------DIKRVV------------------------EREDMAN----------------------------------------------------------------------------------------FFVE--FMQSD-RLGVIATKHMILA---DQ-----------MELGTSHSDCK---------------------------KLAQLHS----TAVDFSKTGIP---------VR---------------LKEM----PFVN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RSRP---DFLAPGPLAKIHDRQNIQLEARYVHPYPDDDIDFSPV---HKY---YR--------------------------------------------SEKILGKLYRAINEHEIWTKDI----------------HTT----VNSNP-----TAVWKRIIDSL-----------------------------TGRCIAL----GAPVNWKAHVETARQ-LRSLYYILPTYEDSMSNAMANFSK-------HPIYPLTE-LEVFIGQVLN---------------NSGAQTNRQRERS---IKLNDEFER-------------IASFILSQMRPSGLI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGYV----------------------------------------------------------------------V-------------------------------SACALLMEVEELEKSRRLYGENRRPLLDAFTSSRKEKNDYEPKGLDRATQKTTFEYGERWTAADVEAMLRQLELNTIV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1203]
'gi|53749452|gb|AAU90307.1| RNA-directed RNA polymerase [Solanum tuberosum]'                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGKTIQVYGFPDL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LP-----AEVVKSFLEKHTG-Y--------------------------------GTV----------------------------------------------------------------------------CALD----------------VKQ-S--KGGSRAFAKVQFVDNISADKI---------------INLA-S--KRL-YFGSSYLKA------------------------WEMKTDIV-----Q-----------------------------V-AYVDHMDG--------------------------------------------------------------------------------------------------------------------------ITLNFGCQISDDKFA--------V-----------------------LG----ST-EVSIKFGIGLKKIYFFLSRG-S-------------A---------DYKLQLSYENIWQVVLHR----PYGQ--NAQ--F--LLIQLFG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AP---RIYKR---------LENSCYSFFKETPDDQWVRTTDFA----------------------PSWIGLSSSLCLQFRRG-----------VHLPNFQESFFHYAERENNITLQTGFTFF-----------------------------I---------SQKSALVPNVQPP-------------------------------------------------------------------------------------------------EGIAIPYKILFKISSLVQHGCIPG-PSL----------------------------------NVYFFRLVDPQ-----RR---NVACIEQALEKLYYL-----KE---------CCYDPVRWLTEQY-DGYLKG-RQPPKSPSIT-L-D----------DG--------LVYVRRVLVTPCKVYFC-------------------------GPEVNVSNRVLRNYS-EDIDNFLRVSFVDEEW------------------------------------------EKLYSTELLPKAST-----GNGI---RTNIYERILSTLRKGFVI-------GDKKFEFLAFSSS-----------------QLRDNSVWMFA--S---------------------------------------------------------RPGLTANDIRTWMG---DFSQ----IK--NVAKYAARLGQ-----SF-------------------GSSTET----------L---SVL--RHEIEV---IPDV--KV--H------------GTS---YVFSDGIGKISADFARRVASKCGL----------------------Q----Y----------------TPSAFQIRY----GGYKGVVAV--DP-Y---------------------------S----SMKLSLR-KSMSKY---------------------ESD---------NNK-LDVLGW-----------SKYQPCFLNRQLITLLSTLG----------VKDDILEQKQKEAVDQL---------DAILHDSLKAQE----ALELMSP-GEN---------------------TNILKAMLNCGYMPD--AEPFLSMMLQTFRASKL-LDLRTKSRIFIPN--GRAMMGCLDESR--TLEYG---------------------QVFVQF--T-----------------GAGHREFS----EDLHPFNNSRSTNCNFILKGNV-VVAKNPCLHP--GDIRVLRAVNVPA----------LHH--------------MVDCVVFPQKGK----RPHPNECSGSDLDGDIYFVCWDPDM--IPP---RQVQP-MEYPP---AP----SI-----------QLDHDV------------------------TIEEVEE----------------------------------------------------------------------------------------YFTN--YIVND-SLGIISNAHVVFA---DR-----------EPDMAMSDPCK---------------------------KLAELCS----IAVDFPKTGVP---------AE---------------IPSQ----LRPK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EY-P---DFMDKPPD--------------------------------KTT---YI--------------------------------------------SERVIGKLFRKVKDKAPQASST----------------AIF----TRDV--------ARRS--YDA-----------------------------DLEVDGF----------EDYIDEAFD-YKTE------YDNKLGNLMEYYGI-------K-----TE-AEILSGGIMK---------------TSKTFDR--RKD----AEAIS---I-------------AVRALRKEARTWFKR---RN-------------------DIDD--------MLPKASAWYHVTYHPTYWGCYNQG-------------------------------------------------------------------------------------------LK--------------RDHFI--SFPW----------------------------------------------------------------------C-------------------------------VYDQLIQIKKEKARN--RPVLNLSYL-----RA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLSRKLVLK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1114]
'gi|46128677|ref|XP 388892.1| hypothetical protein FG08716.1 [Gibberella zeae PH-1] >gi|42549570|gb|EAA72413.1| hypothetical pro'    M----NTKHPL-------------------------SELPRGSRGSPNQNHNQTNGNRESPT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKTSKAMSHKSNEIA--SQLRPSWLSWPDLTVYLERLPSS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-----TSNLWD-WFSDQGEI---------------------------------------------------------------------------------------AQMDINESPQNSAYR------SGKIRFE-----------------PPPRN-DFWGA---------------AVYLIPHPDPRRKSELVEISVRL--DKRVPEGFIRSPVCKDRRHPIVTTLYP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MALEFGIMLEENSMKI------LK-----------------------SMTGTVGERKLKLEINLRQKKLTAFFPMEI------MTRGGRGVR---------QHKVVIDFFAMKNIYQAT-----------TDDDSCAIVLPLEI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PP---RYYWRTPNIRSTFSDDVKTW-----YAGDSWNRATDIVEEAGLPMQ-SPISLNNDYKDSDFIDIGRWTTLRFVL-EAKTEEVK-----DLNRQLVSALHDFNINTIIRDDFQAAHGT---HAEMWKHLDHH-----ASAKSHNASHALSLWHE----------------------------------------------------------------------------------------------------------------DSFVYLPFEVRYQLEVCISQGQLNEHKI-----------------------------------TKEFLDKLA-------SM---PSHRAKEYLEFAAERVLKDGHP---------TTIDPMSTFDSQRDSGDNYK--SISRIPQY-------------------------CGLVRRAVITPTTVRYS-------------------------TPNIEVSNRVMRRFR-HIQDRFLRIQFTEEME------------------------------------------KGKITVNKD----------------QNDEIYKRILRTMYEGIRI-------GDRLYEFLAFGNS-----------------QLRSNGAYFFC--P---------------------------------------------------------TEYVSCDDIRQWMG---QFSH----IK--VVAKYAARLGQ-----CF-------------------STTRDV----------R---GIS--SPNCLQ---IPDVER-----------------N-G---YCFTDGVGKISVFLAKLVGEDMAI----------------------DIC--A----------------DPSAFQFRM----GGCKGVLAV--WPED-------------------------AK-----GTEVHVR-ESQKKF---------------------ESD---------SKG-LEIIRW-----------ARYATATLNLQTILILECLG----------VPIKSFTTLLDQQLKQY---------ELAMRDNDVAIE----MLERFRDEQHN---------------------HSCLADLLRADFKTETFQEPFVVNVINLWQSWSI-KSLKEKARIHVPK--SAFVLGCVDETG--TLRGH-----SFDTEGSKEKDVHRLPQIFLQI----------------------------------S----DPKKYNKTSIIRGPC-VVGRNPSLHP--GDIRVVEAVDCKA----------LHH--------------LTDVVVFPSTGD----RPVPNMLSGGDLDGDDFFVIWDPSL--MPSE--WNHPP-MNYSP---LD----PI-----------ELKRDV------------------------NVDDLRN----------------------------------------------------------------------------------------FFVK--YLKND-KLPLIAMSHRAFA---DE-----------L--GPKSSKCL---------------------------ELAELHS----KAVDYPKTGNP---------AV---------------LRQD----QQPR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KW-P---HWME---K--------------------------------RHS---YH--------------------------------------------SRKALGVIYDKVAHKKVEFNPV-------------------------------------WDRPFDK-----------------------------RITK-RF----E---LDNETLGVARK-IKAE------YDTAVRRILSQNSL-------K-----TE-FELFTSFPLT---------------RPAVGSD---------YKFAEDLSC-------------EFRSIKEHYQDVCIK---AAGGK------------------------DAEKLEPFVAAMYTVTEEQIK-----NEES---------------------------------------------------------------------------------------ILQPQG------LEPK--SMPLI--SFPW----------------------------------------------------------------------I-------------------------------FHGVMCRIA----------------T-----EG--AVDPRT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NIGTHGTTEQSFIRDSTVPQNP----------------------------------SPAGETQPIH-----------------------------------------------------VRVLEEGIGHGALDLTDSRQDED--------------------------------------------------------------------------------------------------------------------------------------------------------------------SEEDDAID------------RLNDLIDG----   [1295]
'gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase [Lycopersicon esculentum]'                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGKTIQVFGFPYL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LS-----AEVVKSFLEKYTG-Y--------------------------------GTV----------------------------------------------------------------------------CALE----------------VKQ-S--KGGSRAFAKVQFADNISADKI---------------ITLA-N--NRL-YFGSSYLKA------------------------WEMKTDIV-----Q-----------------------------LRAYVDQMDG--------------------------------------------------------------------------------------------------------------------------ITLNFGCQISDDKFA--------V-----------------------LG----ST-EVSIQFGIGLKKFFFFLSSG-S-------------A---------DYKLQLSYENIWQVVLHR----PYGQ--NAQ--F--LLIQLFG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AP---RIYKR---------LENSCYSFFKETPDDQWVRTTDFP----------------------PSWIGLSSSLCLQFRRG-----------VRLPNFEESFFHYAERENNITLQTGFTFF-----------------------------V---------SQKSALVPNVQPP-------------------------------------------------------------------------------------------------EGISIPYKILFKISSLVQHGCIPG-PAL----------------------------------NVYFFRLVDPR-----RR---NVACIEHALEKLYYI-----KE---------CCYDPVRWLTEQY-DGYLKG-RQPPKSPSIT-L-D----------DG--------LVYVRRVLVTPCKVYFC-------------------------GPEVNVSNRVLRNYS-EDIDNFLRVSFVDEEW------------------------------------------EKLYSTDLLPKAST-----GSGV---RTNIYERILSTLRKGFVI-------GDKKFEFLAFSSS-----------------QLRDNSVWMFA--S---------------------------------------------------------RPGLTANDIRAWMG---DFSQ----IK--NVAKYAARLGQ-----SF-------------------GSSRET----------L---SVL--RHEIEV---IPDV--KV--H------------GTS---YVFSDGIGKISGDFAHRVASKCGL----------------------Q----Y----------------TPSAFQIRY----GGYKGVVGV--DP-D---------------------------S----SMKLSLR-KSMSKY---------------------ESD---------NIK-LDVLGW-----------SKYQPCYLNRQLITLLSTLG----------VKDEVLEQKQKEAVDQL---------DAILHDSLKAQE----ALELMSP-GEN---------------------TNILKAMLNCGYKPD--AEPFLSMMLQTFRASKL-LDLRTRSRIFIPN--GRTMMGCLDESR--TLEYG---------------------QVFVQF--T-----------------GAGHGEFS----DDLHPFNNSRSTNSNFILKGNV-VVAKNPCLHP--GDIRVLKAVNVRA----------LHH--------------MVDCVVFPQKGK----RPHPNECSGSDLDGDIYFVCWDQDM--IPP---RQVQP-MEYPP---AP----SI-----------QLDHDV------------------------TIEEVEE----------------------------------------------------------------------------------------YFTN--YIVND-SLGIIANAHVVFA---DR-----------EPDMAMSDPCK---------------------------KLAELFS----IAVDFPKTGVP---------AE---------------IPSQ----LRPK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EY-P---DFMDK-PD--------------------------------KTS---YI--------------------------------------------SERVIGKLFRKVKDKAPQASSI----------------ATF----TRDV--------ARRS--YDA-----------------------------DMEVDGF----------EDYIDEAFD-YKTE------YDNKLGNLMDYYGI-------K-----TE-AEILSGGIMK---------------ASKTFDR--RKD----AEAIS---V-------------AVRALRKEARAWFKR---RN-------------------DIDD--------MLPKASAWYHVTYHPTYWGCYNQG-------------------------------------------------------------------------------------------LK--------------RAHFI--SFPW----------------------------------------------------------------------C-------------------------------VYDQLIQIKKDKARN--RPVLNLSSL-----RA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLSHRLVLK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1114]
'gi|48057592|gb|AAT39936.1| putative RNA-directed RNA polymerase [Solanum demissum]'                                    M----EQGKSRKKCLMRYAKISFLWSSLVAHMFDGYEALGCPLLKHL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVELHLEFGYMGKTIQVYGFPRL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LS-----AEVVKSFLEKHTG-Y--------------------------------GTV----------------------------------------------------------------------------CALE----------------VKQ-S--KGGSRAFAKVQFVDNISADKI---------------INLA-S--KRL-YFGSSYLKA------------------------WELETDIV-----Q-----------------------------LWAYVDHMDG--------------------------------------------------------------------------------------------------------------------------ITLNFGCQISDD--------------------------------------------------------------NG-S-------------A---------DYKLQLSYENIWQVVLHR----PYGQ--NAQ--F--LLIQ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ETPDDQWVRTTDFT----------------------PSWIGLSSSLCLQFRRG-----------VHLPNFQESFFHYAERENNITLQTGFTFF-----------------------------V---------SQKSALVPNVQPP-------------------------------------------------------------------------------------------------EGIAIPYKILFKISSLVQHGCIPG-PAL----------------------------------NVYFFRLVDPQ-----RR---NVACIEQALEKLYYL-----KE---------CCYDPVRWLTEQY-DGYFKG-RQPPKSPSIT-L-D----------DG--------LVYVRRVLVTPCKVYFC-------------------------GPEVNVSNRVLRNYS-EDIDNFLRVSFVDEEW------------------------------------------EKLYSTELLPKAST-----GNGI---RTNIYERILSTLRKGFVI-------GDKKFEFLAFSSS-----------------QLRDNSVWMFA--S---------------------------------------------------------RRGLTANDIRSWMG---DFSQ----IK--NVAKYAARFGQ-----SF-------------------GSSRET----------L---SVL--RHEIEV---IPDV--KV--H------------GTS---YVFSDGIGKISADFARKVASNCGL----------------------Q----Y----------------TPSAFQIRY----GGYKGVVAV--DP-Y---------------------------S----SMKLSLR-KSMSKY---------------------ESD---------NNK-LDVLEW-----------SKYQPCYLNRQLVTLLSTLG----------VKDDVLEQKQKEAVDQL---------DAILHDSLKAQE----ALELMSP-GEN---------------------TNILKAMLNCGYMPD--AEPFLSMMLQTFRASKL-LDLRTKSRIFIPN--GRAMMGCLDESR--TLEYG---------------------QVFVQF--T-----------------GAGHREFS----EDLHPFNNSRSTNCNFILKGNV-VVAKNPCLHP--GDIRVLRAVDVPA----------LHH--------------MVDCVVFPQKGK----RPHPNECSGSDLDGDIYFVCWDQDM--IPP---RQVQA-MEFPP---PP----SI-----------QLDHDV------------------------TIEEVEE----------------------------------------------------------------------------------------YFTN--YIVND-GLGIIANAHVVFA---DR-----------EPDMAMSNHAK---------------------------NLLSSFQ----LQWTFQRL-----------------------------V-------FLLK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YH-L---SCALK-NT--------------------------------QTS---WI--------------------------------------------S--------RQTRQPISQKELL----------------ESF--------------------------------------------------------------------------------------------------------------------------------------------------SGK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [942]
'gi|53689744|gb|AAU89756.1| RNA-directed RNA polymerase-like [Solanum tuberosum]'                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGKTIQVYGFPRL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LS-----AEVVKSFLEKHTG-Y--------------------------------GTV----------------------------------------------------------------------------CALE----------------VKQ-S--KGGSRAFAKVQFVDNISADKI---------------INLA-S--KRL-YFGSSYLKA------------------------WELETDIV-----Q-----------------------------LWAYVDHMDG--------------------------------------------------------------------------------------------------------------------------ITLNFGCQISDDKFA--------V-----------------------LG----ST-EVSIKFGIGLKNFFFFLSSG-S-------------A---------DYKLQLSYENIWQVVLHR----PYGQ--NAQ--F--LLIQLFG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AP---RIYKR---------LENSCYSFFKETPDDQWVRTTDFT----------------------PSWIGLSSSLCLQFRRG-----------VHLPNFQESFFHYAERENNITLQTGFTFF-----------------------------V---------SQKSALVPNVQPP-------------------------------------------------------------------------------------------------EGIAIPYKILFKISSLVQHGCIPG-PAL----------------------------------NVYFFRLVDPQ-----RR---NVACIEQALEKLYYL-----KE---------CCYDPVRWLTEQY-DGYFKG-RQPPKSPSIT-L-D----------DG--------LVYVRRVLVTPCKVYFC-------------------------GPEVNVSNRVLRNYS-EDIDNFLRVSFVDEEW------------------------------------------EKLYSTELLPKAST-----GNGI---RTNIYERILSTLRKGFVI-------GDKKFEFLAFSSS-----------------QLRDNSVWMFA--S---------------------------------------------------------RRGLTANDIRSWMG---DFSQ----IK--NVAKYAARFGQ-----SF-------------------GSSRET----------L---SVL--RHEIEV---IPDV--KV--H------------GTS---YVFSDGIGKISADFARKVASNCGL----------------------Q----Y----------------TPSAFQIRY----GGYKGVVAV--DP-Y---------------------------S----SMKLSLR-KSMSKY---------------------ESD---------NNK-LDVLEW-----------SKYQPCYLNRQLVTLLSTLG----------VKDDVLEQKQKEAVDQL---------DAILHDSLKAQE----ALELMSP-GEN---------------------TNILKAMLNCGYMPD--AEPFLSMMLQTFRASKL-LDLRTKSRIFIPN--GRAMMGCLDESR--TLEYG---------------------QVFVQF--T-----------------GAGHREFS----EDLHPFNNSRSTNCNFILKGNV-VVAKNPCLHP--GDIRVLRAVDVPA----------LHH--------------MVDCVVFPQKGK----RPHPNECSGSDLDGDIYFVCWDQDM--IPP---RQVQA-MEFPP---PP----SI-----------QLDHDV------------------------TIEEVEE----------------------------------------------------------------------------------------YFTN--YIVND-GLGIIANAHVVFA---DR-----------EPDMAM---------------------------------------------MDFPKTGVP---------AE---------------IPSQ----LRPK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EY-P---DFMDKPPD--------------------------------KTT---YI--------------------------------------------SERVIGKLFRKVKDKAPQASSI----------------AIF----TRDD--------ARRS--YDT-----------------------------DLEVDGF----------EDYIDEAFD-YKTE------YDNKLGNLMDYYGI-------K-----TE-AEILSGGIMK---------------TSKTFDR--RKD----AEAIS---I-------------AVRALRKEARTWFKR---RN-------------------DIDD--------MLPKASAWYHVTYHPTYWGCYNQG-------------------------------------------------------------------------------------------LK--------------RDHFI--SFPW----------------------------------------------------------------------C-------------------------------VYDQLIQIKKEKARN--RPVLNLSSL-----RD-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLSRKLVLK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1101]
'gi|53689724|gb|AAU89739.1| RNA-directed RNA polymerase-like [Solanum tuberosum]'                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGKTIQVYGFPYL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LS-----AEVVKSFLEKHTG-Y--------------------------------GTV----------------------------------------------------------------------------CALE----------------VKQ-S--KGGSRAFAKVQFVDNISADKI---------------INLA-S--KRL-YFGSSYLKA------------------------WEMKTDIV-----Q-----------------------------LRAYVDHMDG--------------------------------------------------------------------------------------------------------------------------ITLNFGCQISDDKFA--------V-----------------------LG----ST-EVSIKFGIGLKKFFFFLSSG-S-------------A---------DYKLQLSYENIWQVVLHR----PYGQ--NAQ--F--LLIQLFG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AP---RIYKR---------LENSCYSFFKETPDDQWVRTTDFA----------------------PSWIGLSSSLCLQFRRG-----------VHLPNFQESFFHYTERENNITLQTGFTFF-----------------------------V---------SQKSALVPNVQPP-------------------------------------------------------------------------------------------------EGIAIPYKILFKISSLVQHGCIPG-PAL----------------------------------NVYFFRLVDPQ-----RR---NVACIEQALEKLYYL-----KE---------CCYDPVRWLTEQY-DGYLKG-RQPPKSPSIT-L-D----------DG--------LVYVRRVLVTPCKVYFC-------------------------GPEVNVSNRVLRNYS-EDIDNFLRVSFVDEEW------------------------------------------EKLYSTDLLPKAST-----GNGI---RTNIYERILSTLRKGFVI-------GDKKFEFLAFSSS-----------------QLRDNSVWMFA--S---------------------------------------------------------RPGLTANDIRTWMG---DFSQ----IK--NVAKYAARLGQ-----SF-------------------GSSKET----------L---SVL--RHEIEV---IPDV--KV--H------------GTS---YVFSDGIGKISADFARRVASKCGL----------------------Q----Y----------------TPSAFQIRY----GGYKGVVAV--DP-Y---------------------------S----SMKLSLR-KSMSKY---------------------ESD---------NNK-LDVLGW-----------SKYQPCYLNRQLVTLLSTLG----------VKDDVLEQKQKEAVDQL---------DAILHDSLKAQE----ALELMSP-GEN---------------------TNILKAMLNCGYMPD--AEPFLSMMLQTFRASKL-LDLRTRSRIFIPN--GRAMMGCLDESR--TLEYG---------------------QVFVQF--T-----------------GAGHREFS----EDLHPFNNSRSTNCNFILKGNV-VVAKNPCLHP--GDIRVLRAVDVPA----------LHH--------------MVDCVVFPQKGK----RPHPNECSGSDLDGDIYFVCWDQDM--IPP---RQVQP-MEYPP---AP----SI-----------QLDHDV------------------------TIEEVEE----------------------------------------------------------------------------------------YFTN--YIVND-SLGIIANAHVVFA---DR-----------EPAMAMSDPCK---------------------------KLAELFS----IAVDFPKT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [895]
'gi|47824978|gb|AAT38751.1| RNA-directed RNA polymerase [Solanum demissum]'                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGKTIQVYGFPYL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LS-----AEVVKSFLEKHTG-Y--------------------------------GTV----------------------------------------------------------------------------CALE----------------VKQ-S--KGGSRAFAKVQFVDNISADKI---------------INLA-S--KRL-YFGSSYLKA------------------------WEMKTDIV-----H-----------------------------LRAYVDHMDG--------------------------------------------------------------------------------------------------------------------------ITLNFGCQISDDKFA--------V-----------------------LG----ST-EVSIKFGIGLKKFFFFLSSG-S-------------A---------DYKLQLSYENIWQVVLHR----PYGQ--NAQ--F--LLIQLFG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AP---RIYKR---------LENSCYSFFKETPDDQWVRTTDFA----------------------PSWIGLSSSLCLQFRRG-----------VHLPNFQEIFFHYTERENNITLQTGFTFF-----------------------------V---------SQKSALVPNVQPP-------------------------------------------------------------------------------------------------EGIAIPYKILFKISSLVQHGCIPG-PAL----------------------------------DVYFFRLVDPQ-----RR---NVACIEQALEKLYYL-----KE---------CCYDPVRWLTEQY-DGYLKG-RQPPKSPSIT-L-D----------DG--------LVYVRRVLVTPCKVYFC-------------------------GPEVNVSNRVLRNYS-EDIDNFLRVSFVDEEW------------------------------------------EKLYSTDLLPKAST-----GNGI---RTNIYERILSTLRKGFVI-------GDKKFEFLAFSSS-----------------QLRDNSVWMFA--S---------------------------------------------------------RPGLTANDIRTWMG---DFSQ----IK--NVAKYAARLGQ-----SF-------------------GSSKET----------L---SVL--RHEIEV---IPDV--KV--H------------GTS---YVFSDGIGKISADFARRVASKCGL----------------------Q----Y----------------TPSAFQIRY----GGYKGVVAV--DP-Y---------------------------S----SMKLSLR-KSMSKY---------------------ESD---------NNK-LDVLGW-----------SKYQPCYLNRQLVTLLSTLG----------VKDDVLEQKQKEAVDQL---------DAILHDSLKAQE----ALELMSP-GEN---------------------TNILKAMLNCGYMPD--AEPFLSMMLQTFRASKL-LDLRTRSRIFIPN--GRAMMGCLDESR--TLEYG---------------------QVFVQF--T-----------------GAGHREFS----EDLHPFNNSRSTNCNFILKGNV-VVAKNPCLHP--GDIRVLRAVDVPA----------LHH--------------MVDCVVFPQKGK----RPHPNECSGSDLDGDIYFVCWDQDM--IPP---RQVQP-MEYPP---AP----SI-----------QLDHDV------------------------TIE----------------------------------------------------------------------------------------------------------GGLA---------------------------SMCNNSA---------------------------STEELLF----TCLPTAGS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [867]
'gi|33331167|gb|AAQ10792.1| RNA-directed RNA polymerase-like protein [Branchiostoma floridae]'                                    M----EGSSLK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKSEELLITSLPQL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KTAPVQDTLPLKGKVHNVGSSESLHYVKEVFLLLSPSFTVQETSTSKGVYQISFVPSEKEVNT---------------LSVCEQWCRAVEVGKPYWLELSSTHISTTEKKSAGRLTSLQVLDV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VRVSLGCFLDHGTYVS------HW-----------------------MEESHDSTPEISLHLEHDLQSLSVCLKNNNN-----------------------IEKTVVPYSGLDSFVLVC----------SRESRNTTLFFPLNI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AP---RCFVSKSTRAAQE-------------------------------------DRVLSFSTCPPDTIGSSSVLALDVVES-----------STDGSVIEGALRRLEKVGFKIYFSSTRVITAPPTDAN--------------------------------------------------------------------------------------------------------------------------------------------LSKAFDDFSVTYAWRCALSRGYKVSDRA-----------------------------------LPAFLFKLDIAARK-------DPIATASALHQLADT----------------ELKNASTIDQNHT----------------------------EDLPDH--------YVYARKVVVTPTQMLFL-------------------------KPEPIVENRVVREYG---VDNFIRVAFRDEDF------------------------------------------SKLAVTNP----------------NSIRCVTSRVKDVLERGIRI-------GERHFKYLGSSNS-----------------QMREHGCWMYAAVD---------------------------------------------------------KTTTSTSDIRGWMG---DLSH----ER--CVATYVSRLGQ-----FF-------------------SSSRNA----------V---SVSVEDRSVEL---IADVETS----------------SGT---HTFSDGIGKISVPLAKKVAAALGV--------------------------SP----------------VPSAFQIRY----AGCKGVLAQ--DP-T-------------------------LGN----TDRIQIR-GSMKKF---------------------ESE---------HKT-LEVTS----------------------------------------------------------------------------------------------------------------------------------------------------------------------GRIMMGTMDETG--KLQYG---------------------QVFIQY--SR----------------EVDKP------------------QADKVVHQGQV-TVTKNPYFHP--GDMRKFTAVDVPE----------LRH--------------MVDCIVFPSRGP----RPHPDEMSGSDLDGDMYFVTWREGL--ILP---RENRPAMDFTA---QP----KR-----------VLHRPV------------------------QESDMIE----------------------------------------------------------------------------------------FFAE--YIGSN-QLGLIANAHLVHA---DK-----------EDQGIFSQKCI---------------------------DLAQLHS----DAVDAPKTGQC---------PE---------------LKGD----LRPE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VY-P---DFMMK-SD--------------------------------KPQ---YR--------------------------------------------SERIIGRLFRKCQELDSANQRS--GTDDI----------------------------VYHTSRIDH-----------------------------DLVREGF----------DSYIEDAQT-QLNI------YNNMMMSIMSLYGI-------T-----SE-GEVVSGCILK---------------VKQRLGLLKNER----FEVAEYVRA-------------RFKTLWRKTRAEFFK---------------------QFDVEELSEERRKEEQLKKASAWYMVTYSDANKPLDP-------------------------------------------------------------------------------------------------------------SPKLL--SFPW----------------------------------------------------------------------V-------------------------------VYDVLASLKKIARAPNRGVGVFPT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1005]
'gi|53689742|gb|AAU89754.1| RNA-directed RNA polymerase-like [Solanum tuberosum]'                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EHLSVFQI---------------YNLG-G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLFG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AP---RIYKR---------LENSCYSFFKETPDDQWVRTTDFT----------------------PSWIGLSSSLCLQFRRG-----------VHLPNFQESFFHYAERENNITLQTGFTFF-----------------------------V---------SQKSALVPNVQPP-------------------------------------------------------------------------------------------------EGIAIPYKILFKISSLVQHGCIPG-PAL----------------------------------NVYFFRLVDPQ-----RR---NVACIEQALEKLYYL-----KE---------CCYDPVRWLTEQY-DGYLKG-RQPPKSPSIT-L-D----------DG--------LVYVRRVLVTPCKVYFC-------------------------GPEVNVSNRVLRNYS-EDIDNFLRVSFVDEEW------------------------------------------EKLYSTELLPKAST-----GNGI---RTNIYERILSTLRKGFVI-------GDKKFEFLAFSSS-----------------QLRDNSVWMFA--S---------------------------------------------------------RRGLTTNDIRSWMG---DFSQ----IK--NVAKYAARLGQ-----SF-------------------GSSRET----------L---SVL--RHEIEV---IPDV--KV--H------------GTS---YVFSDGIGKISADFARRVASKCGL----------------------Q----Y----------------TPSAFQIRY----GGYKGVVAV--DP-Y---------------------------S----SMKLSLR-KSMSKY---------------------ESD---------NNK-LDVLGW-----------SKYQPCYLNRQLVTLLSTLG----------VKDDVLEQKQKEAVHQL---------DAILHDSLKAQE----ALELMSP-GEN---------------------TNILKAMLNCGYMPD--AEPFLSMMLQTFRASKL-LDLRTRSRIFIPN--GRAMMGCLDESR--TLEYG---------------------QVFVQF--T-----------------GAGHREFS----EDLHPFNNSRSTNCNFILKGNV-VVAKNPCLHP--GDIRVLRAVDVPA----------LHH--------------MVDCVVFPQKGK----RPHPNECSGSDLDGDIYFVCWDQDM--IPP---RQVQA-MEYPP---AP----SI-----------QLDHNV------------------------TIEEVEE----------------------------------------------------------------------------------------YFTN--YIVND-SLGIIANAHVVFA---DR-----------EPDMAMSDPCK---------------------------KLAELFS----IAVDFPKTGVP---------AE---------------IPSQ----LRPK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EY-P---DFMDKPPD--------------------------------KTT---YI--------------------------------------------SERVIGKLFRKVKDKAPQASSI----------------AIF----TRDV--------ARRS--YDA-----------------------------DLEVDGF----------EDYIDEAFD-YKTE------YDNKLGNLMDYYGI-------K-----TE-AEILSGGIMK---------------ASKTFDR--RKD----AEAIS---V-------------AS---------------------------------------------------PTGGIILGITLDG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [886]
'gi|47824981|gb|AAT38754.1| RNA-directed RNA polymerase [Solanum demissum]'                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EHLSVFQI---------------YNLG-G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLFG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AP---RIYKR---------LENSCYSFFKETPDDQWVRTTDFA----------------------PSWIGLSSSLCLQFRRG-----------VHLPNFQESFFHYAERENNITLQTGFTFF-----------------------------I---------SQKSALVPNVQPP-------------------------------------------------------------------------------------------------EGIAIPYKILFKISSLVQHGCIPG-PSL----------------------------------NVYFFRLVDPQ-----RR---NVACIEQALEKLYYL-----KE---------CCYDPVRWLTEQY-DGYLKG-RQPPKSPSIT-L-D----------DG--------LVYVRRVLVTPCKVYFC-------------------------GPEVNVSNRVLRNYS-EDIDNFLRVSFVDEEW------------------------------------------EKLYSTELLPKAST-----GNGI---RTNIYERILSTLRKGFVI-------GDKKFEFLAFSSS-----------------QLRDNSVWMFA--S---------------------------------------------------------RPGLTANDIRTWMG---DFSQ----IK--NVAKYAARLGQ-----SF-------------------GSSKET----------L---SVL--RHEIEV---IPDV--KV--H------------GTS---YVFSDGIGKISADFARRVASKCGL----------------------Q----Y----------------TPSAFQIRY----GGYKGVVAV--DP-Y---------------------------S----SMKLTLR-KSMSKY---------------------ESD---------NNK-LDVLGW-----------SKYQPCFLNRQLITLLSTLG----------VRDDILEQKQKEAVDQL---------DAILHDSLKAQE----ALELMSP-GEN---------------------TNILKAMLNCGYMPD--AEPFLSMMLQTFRASKL-LDLRTKSRIFIPN--GRAMMGCLDESR--TLEYG---------------------QVFVQF--T-----------------GAGHREFS----EDLHPFNNSRSTNCNFILKGNV-VVAKNPCLHP--GDIRVLRAVDVPA----------LHH--------------MVDCVVFPQKGK----RPHPNECSGSDLDGDIYFVCWDQDM--IPP---RQVQP-MEYPP---AP----SI-----------QLDHDV------------------------TIEEVEE----------------------------------------------------------------------------------------YFTN--YIVND-SLGIISNAHVVFA---DR-----------EPDMAMSDPCK---------------------------KLAELCS----IAVDFPKTGVP---------AE---------------IPSQ----LRPK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EY-P---DFMDKPPD--------------------------------KTT---YI--------------------------------------------SERVIGKLFRKVKDKAPQASST----------------AIF----TRDV--------ARRS--YDA-----------------------------DLEVDGF----------EDYIDEAFD-YKTE------YDNKLGNLMDYYGI-------K-----TE-AEILSGGIMK---------------TSKTFDR--RKD----AEAIS---I-------------AVRALRKEARTWFKR---RN-------------------DIDD--------MLPKASAWYHVTYHPTYWGCYNQG-------------------------------------------------------------------------------------------LK--------------RDHFI--SFPW----------------------------------------------------------------------C-------------------------------VYDQLIQIKKEKARN--RPVLNLSYL-----RA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLSRKLVLK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [963]
'gi|47824908|gb|AAT38684.1| RNA-directed RNA polymerase [Solanum demissum]'                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGKTIQVYGFPDL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LP-----AEVVKSFLEKHTG-Y--------------------------------GTV----------------------------------------------------------------------------CALD----------------VKQ-S--KGGSRAFAKVQFVDNISADKI---------------INLA-S--KRL-YFGSSYLKA------------------------WEMKTDIV-----Q-----------------------------V-AYVDHMDG--------------------------------------------------------------------------------------------------------------------------ITLNFGCQISDDKFA--------V-----------------------LG----ST-EVSIKFGIGLKKIYFFLSRG-S-------------A---------DYKLQLSYENIWQVVLHR----PYGQ--NAQ--F--LLIQLFG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AP---RIYKR---------LENSCYSFFKETPDDQWVRTTDFA----------------------PSWIGLSSSLCLQFRRG-----------VHLPNFQEKFFHYAERENNITLQTGFTFF-----------------------------I---------SQKSSLVPNVQPP-------------------------------------------------------------------------------------------------EGIAIPYKILFKISSLVQHGCIPG-PAL----------------------------------NVYFFRLVDPQ-----RR---NVACIEQALEKLYYL-----KE---------CCYDPVRWLTEQY-DGYLKG-RQPPKSPSIT-L-D----------DG--------LVYVRRVLVTPCKVYFC-------------------------GPEVNVSNRVLRNYS-EDIDNFLRVSFVDEEW------------------------------------------EKLYSTELLPKAST-----GNGI---RTNIYERILSTLRKGFVI-------GDKKIEFLAFSSS-----------------QLRDNSVWMFA--S---------------------------------------------------------RPGLTANDIRTWMG---DFSQ----IK--NVAKYAARLGQ-----SF-------------------GSSKET----------L---SVL--RHEIEV---IPDV--KV--H------------GTS---YVFSDGIGKISADFARRVASKCGL----------------------Q----Y----------------TPSAFQIRY----GGYKGVVAV--DP-Y---------------------------S----SMKLSLR-KSMSKY---------------------ESD---------NNK-LDVLEW-----------SKYQPCYLNRQLITLLSTLG----------VKDDVLEQKQKEAVDQL---------DAILHDSLKAQE----ALELMSP-GEN---------------------TNILKAMLNCGYMPD--AEPFLSMMLQTFRASKL-LDLRTKSRIFIPN--GRAMMGCLDESR--TLEYG---------------------QVFVQF--T-----------------GAGHREFS----EDLHPFNNSRSTNCNFILKGNV-VVAKNPCLHP--GDIRVLRAVDVPA----------LHH--------------MVDCVVFPQKGK----RPHPNECSGSDLDGDIYFVCWDQDM--IPP---RQVQP-MEYPP---AP----SI-----------QLDHDV------------------------TIEEVEE----------------------------------------------------------------------------------------YFTN--YIVND-SLGIISNAHVVFA---DR-----------EPDMAMSDPCK---------------------------KLAELCS----IAVDFPKTGVP---------AE---------------IPSQ----LRPK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EY-P---DFMDKPPD--------------------------------KTT---YI--------------------------------------------SERVIGKLFRKVKDKAPQASST----------------AIF----TRDV--------ARRS--YDA-----------------------------DLEVDGF----------EDYIDEAFD-YKTE------YDSKLGNLMDYYGI-------K-----TE-AEILSGGIMK---------------TSKTFDR--RKD----AEAIS---I-------------AVRALRKEARTWFKR---HN-------------------DIDD--------MLPKASAWYHVTYHPTYWGCYNQG-------------------------------------------------------------------------------------------LK--------------RDHFI--SFPW----------------------------------------------------------------------C-------------------------------VYDQLIQIKKEKARN--RPVLNLSYL-----RA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLSRKLVLK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1114]
'gi|53689719|gb|AAU89734.1| RNA-directed RNA polymerase-like [Solanum tuberosum]'                                    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGKTIQVYGFPDL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LP-----AEVVKSFLEKHTG-Y--------------------------------GTV----------------------------------------------------------------------------CALD----------------VKQ-S--KGGSRAFAKVQFVDNISADKI---------------INLA-S--KRL-YFGSSYLKA------------------------WEMKTDIV-----Q-----------------------------V-AYVDHMDG--------------------------------------------------------------------------------------------------------------------------ITLNFGCQISDDKFA--------V-----------------------LG----ST-EVSIKFGIGLKKIYFFLSRG-S-------------A---------DYKLQLSYENIWQVVLHR----PYGQ--NAQ--F--LLIQLFG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AP---RIYKR---------LENSCYSFFKETPDDQW------------------------------------------FRRG-----------VHLPNFQESFFHYAERENNITLQTGFTFF-----------------------------I---------SQKSALVPNVQPP-------------------------------------------------------------------------------------------------EGIAIPYKILFKISSLVQHGCIPG-PSL----------------------------------NVYFFRLVDPQ-----RR---NVACIEQALEKLYYL-----KE---------CCYDPVRWLTEQY-DGYLKG-RQPPKSPSIT-L-D----------DG--------LVYVRRVLVTPCKVYFC-------------------------GPEVNVSNRVLRNYS-EDIDNFLRVSFVDEEW------------------------------------------EKLYSTELLPKAST-----GNGI---RTNIYERILSTMQKGFVI-------GDKKFEFLAFSSS-----------------QLRDNSVWMFA--S---------------------------------------------------------RPGLTANDIRTWMG---DFSQ----IK--NVAKYAARLGQ-----SF-------------------GSSKET----------L---SVL--RHEIEV---IPDV--KV--H------------GTS---YVFSDGIGKISADFARRVASKCGL----------------------Q----Y----------------TPSAFQIRY----GGYKGVVAV--DP-Y---------------------------S----SMKLSLR-KSMSKY---------------------ESD---------NNK-LDVLGW-----------SKYQPCYLNRQLITLLSTLG----------VKDDILEQKQKEAVDQL---------DAILHDSLKAQE----ALELMSP-GEN---------------------TNILKAMLNCGYMPD--AEPFLSMMLQTFRASKL-LDLRTKSRIFIPN--GRAMMGCLDESR--TLEYG---------------------QVFVQF--T-----------------GAGHREFS----EDLHPFNNSRSTNCNFILKGNV-VVAKNPCLHP--GDIRVLRAVDVPA----------LHH--------------MVDCVVFPQKGK----RPHPNECSGSDLDGDIYFVCWDQDM--IPP---RQVQP-MEYPP---AP----SI-----------QLDHDV------------------------TIEEVEE----------------------------------------------------------------------------------------YFTN--YIVND-SLGIISNAHVVFA---DR-----------EPDMAMSDPCK---------------------------KLAELCS----IAVDFPKTGVP---------AE---------------IPSQ----WRPK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EY-P---DFMDKPPD--------------------------------KTT---YI--------------------------------------------SERVIGKLYRKVKDKAPQASST----------------AIF----TRDV--------ARRS--YDA-----------------------------DLEVDGF----------EDYIDEAFD-YKTE------YDNKLGNLMDYYGI-------K-----TE-AEILSGGIMK---------------TSKTFDR--RKD----AEAIS---I-------------AVRALRKEARTWFKR---RN-------------------DIDD--------MLPKASAWYHL-----------QQ-------------------------------------------------------------------------------------------AD--------------EDDFV---------------------------------------------------------------------------------------------------------------QRIMVPKSSSLYYFPDIIALELY-----TK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EFKRKKSD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1076]
'gi|47824911|gb|AAT38687.1| RNA-directed RNA polymerase [Solanum demissum]'                                    -------------------------------MVDGYEALGCPLVKHL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NVELHLEFGYMGKTIQVYGFPDL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LS-----AEVVKSFLEKHTG-Y--------------------------------GTV----------------------------------------------------------------------------CALE----------------VKQ-S--KRGSRAFAKVQFVDNISADKI---------------INLA-S--KRL-YFGSSYLKA------------------------WEMKADIV-----Q-----------------------------LRAYVDHMDG--------------------------------------------------------------------------------------------------------------------------ITLNFGCQISDD--------------------------------------------------------------NG-S-------------A---------DYKLQLSYENIWQVVLHR----PYGQ--NAQ--F--LLIQ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ETPDDQWVRTTDFA----------------------PSWIGLSSSLCLQFRRG-----------VHLPNFQESFFHYTERENNITLQTGFTFF-----------------------------V---------SQKSALVPNVQPP-------------------------------------------------------------------------------------------------EGIAIPYKILFKISSLVQHGCIPG-PAL----------------------------------DVYFFRLVDPQ-----RR---NVACIEQALEKLYYL-----KE---------CCYDPVRWLTEQY-DGYLKG-RQPPKSPSIT-L-D----------DG--------LVYVRRVLVTPCKVYFC-------------------------GPEVNVSNRVLRNYS-EDIDNFLRVSFVDEEW------------------------------------------EKLYSTDLLPKAST-----GNGI---RTNIYERILSTLRKGFVI-------GDKKFEFLAFSSS-----------------QLRDNSVWMFA--S---------------------------------------------------------RPGLTANDIRTWMG---DFSQ----IK--NVAKYAARLGQ-----SF-------------------GSSKET----------L---SVL--RHEIEV---IPDV--KV--H------------GTS---YVFSDGIGKISADFARRVASKCGL----------------------Q----Y----------------TPSAFQIRY----GGYKGVVAV--DP-Y---------------------------S----SMKLSLR-KSMSKY---------------------ESD---------NNK-LDVLGW-----------SKYQPCYLNRQLVTLLSTLG----------VKDDVLEQKQKEAVDQL---------DAILHDSLKAQE----ALELMSP-GEN---------------------TTILKAMLNCGYMPD--AEPFLSMMLQTFRASKL-LDLRTRSRIFIPN--GRAMMGCLDESR--TLEYG---------------------QVFVQF--T-----------------GAGHREFS----EDLHPFNNSRSTNCNFILKGNV-VVAKNPCLHP--GDIRVLRAVDVPA----------LHH--------------MVDCVVFPQKGKSFDDRPHPNECSGSDLDGDIYFVCWDQDM--IPP---RQVQP-MEYPP---AP----SI-----------QLDHDV------------------------TIEEVEE----------------------------------------------------------------------------------------YFTN--YIVND-SLGIIANAHVVFA---DR-----------EPDMAMSDPCK---------------------------KLAELFS----IAVDFPKTGVP---------AE---------------IPSQ----LRPK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EY-P---DFMDK-PD--------------------------------KTT---YI--------------------------------------------SERVIGKLFRKVKDKAPQASSI----------------AIF----TRDV--------ARRS--YDV-----------------------------DLEVDGF----------EDYIDEAFD-YKTE------YDNKLGNLMDYYGI-------K-----TE-AEILSGGIMK---------------TSKTFDR--RKD----AEAIS---I-------------AVRALRKEARTWFKR---RN-------------------DIDD--------MLPKASAWYH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LIQIKKEKALN--RPVLNLSSL-----RA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLSHKLVLK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1068]
'gi|769816|emb|CAA83245.1| unnamed protein product [Phanerochaete chrysosporium]'                                    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDIYMAHIGFS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VT-----REHLKTEIARVLH--------------------------------------------------------------------------------------------------------------------------------------SPEYQHHRGVQFPMNFEVIIHKKKGTSPFRSGILTVPTPDIGAHFLRDFGGGTPMRRMVLGTRIFFQPGNKQPRPHVLEEIRRAPYVDPREEDDRRRVATELREKTIAL---------------------------------------------------------------------------------------------------------------------------------------------------------RTVQFGWECRDNVFSV----------------------------------EWERVCDARCELYYHEERREFHIKLYQ------------------------GTRTKIISIKASHIAWTS---AGLDK--TTQPPLPILFFTLNH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PP---AYETEMSQID-------------------------------------------------------------MTLQLLEFMGISDSSEGLLNMPMLSPGNALRDRWSHFEDSQKPYAPFVSTTIRLICREREHLSLFRDLCSHARMQTDDYLYPVEYRELFAPDVQERYE------------------------------------------------------------------------------------------------QWVRRLPWKVAFQVEALVRGLLVDMKEA------------------------------------LALRAKISRMVQAK------GEAYTSVFLRHFATQAKTLFWYTDDSRSQAGSVDDLFTRCEREYVPVKRRRLRGPPNQD---------------------------IFDCLHVTVTPTTHRLD-------------------------GPYPERSNRVMRMYP-DYHDCFVRINFVDETD------------------------------------------LQFRFDREV---------------DGRAFIKRRVGEILTNGIDI-------AGRHFEFLAYSQS-----------------ALKEHAVWFVK--EFMLPN----------------------------------------------------GTIVNARTIIAGLG---DFTRDHQLIY--CPARYGARISQ-----AF-------------------TATDSS----------V---KVQ--PDEVFE---IDDIEGP----------------TGT---WCFTSGVGTMSVQLARDIWKKLAA-------------------RRGGSRWKT----------------YPRALQIRF----RGSKGMLSV--DH-T-------------------------LQ-----GRAICLR-PSMIKF---------------------EAP--------ESLTDIEIARA----------FNRPGPFYLNRPLIMIMEHLG----------VPYEVFEELQDMAVEEA---------QESVESLEKAAR----LLETFGLGASYR----------------L---TSIFLSLHKLGVGPLT-GDEFWQKMMDFAINHVL-RELKHHARIPVPN--AWNLVGVADVHG--YLEQD---------------------EVFGCIYPLD---------------------------------------GTGPIYLDGPT-LVTRSPTIHP--GDVQVAHGIGRPP------RGSPFEH------------ESLRNTLVFSTKGS------------SANFDRLVFFSIHPDDVFRFAS------SPVLSRRR----------------------RSGRCA------------------------TTSDPFL----------------------------------------------------------------------------------------IFVS---LLTD-KATNTASQCLK--------------------------TCC---------------------------RPGHMPL----LAIRLHRKSC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [953]
'gi|14030853|emb|CAC35915.1| Hypothetical protein M01G12.12 [Caenorhabditis elegans] >gi|13655331|emb|CAC35914.1| Hypothetical p'    M------SGQNGSIRLEFPEFDDSIDRIEYGIEMMLNSVPAILQHHKIDIKSRHEMEIVEEQDCDSFFEVNYDVASAKFDQTIIDAMRAYLFSLNANWPRPY----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVLHGSDFWAKTLDCYI-EVPL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAMYFGNIQGYTYISHWQISFSGK-----------------------KISADANELLNKIVAEFEFDRADMITVTFQCLKRK-----------------RINYQTIIRKDTIRRIIVDP----------QVDMNKTRIHFELNC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PP---LIRQGSVDDDKPSTQKPFYKRTNRYSCI---GTKEYGSP--------------------HESAISDSPFFTIELQKQESDGNSG----DSNDTLYRVLSRLRSRTGVQIEFANFPKVDVPIGKVYPYLRY---------PTSSKSYAFECFIYNCFPSKMKII-DAQSI------------------------------------------------------------------------------------------------NENDGRQFAITYLIECLLSRGAIVKDQV-----------------------------LTDEICWGQFLGLITHYYLE-------NDKLCEAALEDLIYL-----------IDGRKRIGSIWKCFHKICQKRLVMQLTNGMSEQEI-EEG---------------------YQRVRKVIFTPTRVIYT-------------------------PPEMIMGNRVLRNFD-RDGTHVLRVTFRDDNN------------------------------------------RKMRAN------------------ATGELLDICVKKYLEHGIVV-------ANRDFGFLGCSSS-----------------QMRDNGAYFMVKNTDNRHKNACKMNS---------------------------------------------KFKPNIDSVRNQLG---NFLQ----IE--NIPKLMARLGQ-----CF-------------------TQSRLT--------------GVSLGPDNYCL---THDLSGGRSSN------------GSE---YTFSDGVGMMSYEFAQEVSRLMSF-------------------------GRS----------------VPSCFQFRY----RGMKGVLAI--DP-----------LLDKERNWQEKHGISLSK-----NIKCVFR-PSQIKF---------------------EGK------QILGDQ-VEMVKY-----------SSPVLVALNKPLINILDQVSEMQSLECHRRITSRI-EELMDLQTLSF---------AKQMTDEACFRN----KLKEFPRR------------------------IDIDYLRTIWGFTLS--NEPFFRSLVKASIKFAI-TKQLFKEQIQIPSELGRSMLGVVDETG--ILQYG---------------------QVFVQY--TK----------------NHRNILP-------PRDS--NRKVLGSEIVTGTV-LLTKNPGIVP--GDVRIFEAVDIPE----------LHH--------------LCDVVVFPQHGP----RPHPDEMAGSDLDGDEYSVIWDQKL--LLE---RNEEA-FDFAV---EK----NL----------QTYEWED------------------------IDDLMRD----------------------------------------------------------------------------------------VYVE--YLKKD-LVGLIANSHLHNS---DQ-------------YGLTSRVCM---------------------------NLAKKSC----QAVDFSKSGKP---------PDELQTTWKTDDATGEMIPPE-----RAE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RV-P---DYHVGSDH--------------------------------MPK---YV--------------------------------------------SPRLCGKLFREFQGIDNAMKIS-------------------------------EEKSEQYKIEVDE-----------------------------SIRVDGF----------EEYMEDAKK-QLAS------YNGQLKSTMDTYGI-------Q-----SE-GEIMSGCIIE---------------MRNRISDSDQDD-MSFYNTNRMIET-------------KMTALVSKFRTIFFQ---QFGGFQEVCTL-LPDAYNESNFFNFRCENPNEEIRKKAVAWYRACYECAKSTREPRKL-----------------------------------------------------------------------------------------------------------------SFAW----------------------------------------------------------------------I-------------------------------AYDVIAKIKETKVLENVEMNIGGANP-----MYTYLEHHRARY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------INDHVDDFEKFRRNLDNLITGKESKKAVFILQRYIYMIPGLDSVMFVLMRWGEALELFEGRSMSIYHFLLMFIMFSTGQLASADGNAEQFFGKLDVEEYRRRKKNGTLEPDIPL--------TRHQRSDM--------MFKFFQLMGSRKFRTMRSISFRPLGFSSVFMSGEWMVFHEPALKTYYNIMFNLRFEELPISTDPTTTHETRLRECEPFVIELPEKANMDMLIKKLTEKSKVSQLNLRRQDKN----KKTSNSTVRYIVSASGTFESTQQLRKLVTVTSPIKNHWEGQDLAQQMANFCYLKIMKDDL-------------   [1579]
'gi|14530420|emb|CAB01701.2| Hypothetical protein F26A3.3 [Caenorhabditis elegans] >gi|17506499|ref|NP 492132.1| Enhancer of Glp'    M----GDEGYRGWIKLEIPCSLPE-RQMGPIVKCHVAKLEPALNEYNIKVLTKGQVQVVEEQDCEPFYETNYEVATSRFSHDLIAAIQTYLKDLSTDHLMPFQRGN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVLHSSDFWSSELTCHLVDIPL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAVFFGNIQGGTFINHWEVSFWDDVRRRKSARTRNT-----------EPTQADKIGMNQIKVEFEFDKIDFMTVHFK--HFENDFEVADKDAKRTKQTVTMYYQITVRRTSIRRIIVDP------VVQDCNGSDRIRVHFELNC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PV---LIRRAYRTAKQESENRHSVPHYRRYLVINR-GRSANQYP--------------------TAKAITDSPVFTIEFDQS-----------VGLNEIYRLLSRLRIRTGVSIEFADIPSIDCLIWRENPYNRWTFLNNQHLSPTHFSAPIYRDFITTAFPKKHEVC-GSREV------------------------------------------------------------------------------------------------DTNRERKFAITYLLECLISRGAVVKDQI-----------------------------LLDEGIWHRFLEVILHYYTK-------DDKLCEAGLEDLVHM-----------IDGRKRIGSLIKCFDRICQTRQRNSLVNGLTTEEM-REG---------------------YQRVRKIIFTPTRVIYV-------------------------APETLMGNRVLRRYD-HDGTRVLRITFRDDDN------------------------------------------QKMRTN------------------KTSTMLEKTVNQYLKNGITV-------AGRNFGYLGSSNS-----------------QMRDNGAYFMEKYSSSQCREYERIYQIKPPI----------------------------------------TFNPKIQAARKNLG---RFET----ID--NIPKMMARLGQ-----CF-------------------TQSRLS--------------GVNLERCTYMT---TYDLTGGKNLK------------GDE---YTFSDGVGMMSYRFAQMVSEVMDF-------------------------GKG----------------VPSCFQFRF----RGMKGVISI--EP-----------LLDNLRQWSISYNISKPSDDSSWSLNCMFR-PSQIKF---------------------ISK------RHPRDQ-VEIVKY-----------SSPVPVALNKPFINILDQVSEMQSLECHRRVTNRI-EELLDRQMLSF---------AQQMVDETFCRN----RLKELPRR------------------------VDIDYLRTTWGFTLS--SEPFFRSLIKASIKFSI-TRQLRKEQIPIPCDLGRSMLGVVDETG--RLQYG---------------------QIFVQY--TK----------------NLALKLP-------PKNA-------ARQVLTGTV-LLTKNPCIVA--GDVRIFEAVDIPE----------LHH--------------MCDVVVFPQHGP----RPHPDEMAGSDLDGDEYSIIWDQQL--LLD---KNEDP-YDFTS---EK----QK----------ASFKEDE------------------------IDDLMRE----------------------------------------------------------------------------------------FYVK--YLKLD-SVGQISNSHLHNS---DQ-------------YGLNARVCM---------------------------DLAKKNC----QAVDFTKSGQP---------PDELERKWRKDEETGEMIPPE-----RAE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RV-P---DYHMGNDH--------------------------------TPM---YV--------------------------------------------SPRLCGKLFREFKAIDDVLKIS-------------------------------EERDEQVEISIDE-----------------------------TIKIDGY----------TEYMASAKN-DLAR------YNAQLRSMMENYGI-------K-----TE-GEVFSGCIVD---------------MRNRISDKDQDD-MSFFNTNQMIET-------------KLTNLFKKYREIFFE---EFEGGWEGNTEAFSRYGRDSNILQRQCRAPTVQMMKKAVAWYRACYEEARITRENKKL-----------------------------------------------------------------------------------------------------------------SFAW----------------------------------------------------------------------L-------------------------------AYDVIAKVKQDKSLTSDEVKMGGANP-----LYTMLDDHRSQY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVDNSRKFEAFRQFSTPKTSGEQVKRAHRIIKMYTETYPGLDAVLFMLDEWARISNLFENQSLREYHLSLLFILFATRQFSSVDGNAAKFFNKVDEKSYKQSKTIGDFEPSLYI--------EEKGKSQM--------MVKFLEFLASRKFRKMANLSFCALDFSSIFMRGEWQIFHLAALKTYYNVLFNLRFEELPVSTDPTTTVRSIIRENEPFVIELPANCDRSLVHRKLVEHTGVKEIFMRNMEKSVRSSDDVQKINMRLLVSTRGTLESMYKLRQLVAVKVPIKTYVTGQDVSTQMARLCYEKIVRGHINI-----------   [1632]
'gi|39581073|emb|CAE57375.1| Hypothetical protein CBG00321 [Caenorhabditis briggsae]'                                    M----GDEGYRGWIKLEIPCFEPE-RHMNNIIRCHTTKLEPALNSYNMRIHTKGQVQAVEEQDCEPFYESNYEIVSSHFSHHLIIAIQNYLKSLSMDRLMPFQLGN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVLHSSDFWSSELTCHLADIPL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAFFFGNIQGGTFINHWEVSFWEDTHRRNRLRQKNM-----------QPTASDRQGLNQIRVEFEFDKVDFMTVHFK--HKEGDFEVISKDFRKTRETVTMYYQITVRRTSIRRVIVDP------VVNDTNGGDRIRIHFELNC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PV---LIRRAYKTEKQEAEAKHQVPHYRRFLVINR-GRSANMYP--------------------TPKAITDSPVFTIEFDTS-----------VSLEEVYRLISRLRIRTGVSIEFATIPSVDCLIWRENPYHRWTFHGSSHLSPTHFSAPIYRDFITTAFPRKHEVC-GSREV------------------------------------------------------------------------------------------------DTNRERKFAITYLLECLISRGAVVKDQI-----------------------------LLDDTIWHRFLEVILHYYTK-------DDKLCEAGLEDLVHM-----------IDGRKRIGSLIKCFDRICQTRQKNSLVNGLTTEEM-REG---------------------YQRVRKIIFTPTRVIYV-------------------------APETLMGNRVLRRYD-HDGTRVLRITFRDDDN------------------------------------------QKMRTN------------------KTSTLLEKTVNTYLMNGITV-------AGRNFGYLGSSNS-----------------QMRDNGAYFMEKYSSSQCREYEKMCRMAPPI----------------------------------------TFNPKIQAARKNLG---RFET----ID--NIPKMMARLGQ-----CF-------------------TQSRLS--------------GVNLDRCTYVT---MYDLTGGKNIK------------GDE---YTFSDGVGMMSMNFAQMVSQVMDF-------------------------GKG----------------VPSCFQFRF----RGMKGVIAV--EP-----------FLDDLRQWSIENDIQEVSEDTAWGLNCVFR-PSQIKF---------------------ISK------RHPRDQ-VEIVKY-----------SSPVPVSLNKPFINILDQVSEMQSLECHRRVTNRI-EELLDRQMLSF---------AQQMIDETFCRN----RLKELPRR------------------------IDIDYLRTTWGFTLS--SEPFFRSLIKASIKFSI-TKQLRKEQIPIPADLGRSMLGVVDETG--RLQYG---------------------QIFVQY--TR----------------NLALKLP-------PKSA-------SRSVLTGTV-LLTKNPCIVA--GDVRIFEAVDIPE----------LHH--------------MCDVVVFPQHGP----RPHPDEMAGSDLDGDEYSIIWDQQL--LLD---RNEDP-FDFTS---EK----QK----------SSFKEEE------------------------IDDLMRE----------------------------------------------------------------------------------------FYVK--YLKLD-SVGTISNSHLHNS---DQ-------------YGLNARVCM---------------------------DLAKKNC----QAVDFTKSGQP---------PEELERKWRKDEVTGEMIPPE-----RAE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RV-P---DYHMGNDH--------------------------------TPM---YV--------------------------------------------SPRLCGKLFREFKAIDDVLKIS-------------------------------EERDEQVEITIDE-----------------------------TIMVDGY----------KEYMHSARE-DLAR------YNAQLRSMMENYGI-------K-----TE-GEVFSGCIVD---------------MRNRISDKDQDD-MSFYNTNQMIET-------------KVTNLYKKYREHFFE---EFEGAWEANTEGTSRGESDTNILQRHCRAPTQNMMKKAVAWYRACYEEARVTRENKKL-----------------------------------------------------------------------------------------------------------------SFAW----------------------------------------------------------------------L-------------------------------MYDVLAMVKQTKSLTSDDIRMGGSNP-----LYTMLDAHRSQY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLDNRSVFEDYIRFAPSKNQGEQVARALEIIRMYVETNPGLEEVMFVINEWARASKLFENQPIRNYHLSLLFILFATRQFSSVDGNAAAFFPKIDERGWREEKANGEFKQGLEF--------MEMKKSQM--------IVKFLEFLASRKFRKLPNVSFRTLRFSSIFMRGEWQIFHVAALKTYYNLLFNLRFEELPVSTDPTMTVRSIIRENEPFVVELPADADRTLVHRKLIEHTGVEEIYMRNMEKSVRGVDEQQKANTRYLVSTRGTLESMYKLRQLVAVKVPIKTYVTGQEISTQMARLCYEKIVKGHIS------------   [1631]
'gi|88184235|gb|EAQ91703.1| hypothetical protein CHGG 03638 [Chaetomium globosum CBS 148.51]'                                    M----GKTPGPAIPSTPSNKRIVGNVAVEKVIQQVNS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DYNLDIE-IPDPTLSPLKRKQLGVEN--EKYARWDRICRGIQFLFYQKGDMLDQALHCFFNEAKAASLQWKPKPHAEPGT------LPSPRTPPKAQSPGEKRHLQEILINVIDHF-------------------KARARPALFLPESNGGTRHGPVLASGEDGPESP-----------------------GSPGSKRSFDSDD-DHGAKRTRGQALASFRSPGPSP---TPSAFTDALDKVPTRRYLGHPSPKNWTPERRRPEEERDSSSDTSNSSKVSSVFSSR--------------------------------GRQQSTQTTVDRDSQEPK--RPLGTPISTRPSPSQFDVANRITP--HAPRSRGPTDSPPKPSPRSSAVSTVYPDSSVPSTS--------------------------------------------SLDTASASSSSWDRGDACLDASKLTP-------IQRRLQNIWPKFP------RWLRDAPLPVAWEITRICLHCKVEIDDD--TVKYDPKWAKS-DMLGIWRSLSQLEPFRGKSFPERPPAEVFAAALAGF----------------------------------------------------------------------------------ESRGNTVVMSAALEFNP--SKSGPLFLLDM---------------------KPLRFDEGCRLTRRFG---PDRFLEVLIPSPTA-----------------------------------------------------------LNAPPIIKDTERGADQLIQWFTQKPHT------IVGRQWQAFYSKDAGYRKPPKDFKL-GPDAKATFKERVHFFAENGPNFRPTSIRSRHEIPSDTAHQ------------------------------------RAQIKVSHMLDWLL---HLDQ--NEGQ--PHLKLFSRIQL-----GL-------------------SKTFPA----------V---KFE--PEQILHR--PEDILS-----------------PTG---KVMNDGIGRMSRGVARKVRDALGL--------------------------SD----------------IPSAIQGRM----GSAKGMWLM--DV-GNSGD----------------------------TDWIETY-PSQRKW---------------------NCD----DTDPYHRT-LEVRSV----------ASELKPAGLNLQFLPVLEDRA----------RDKRRMKHAIGNRLTNNL--------ELQFENQKTALKRPSQFRQWVNENSNDR-GSRVKHGQVPFLGGLPESKSEILHFLLNSGFDPK--SQKYLQDLAFELQKQKC-DILRTKLNIRVGR--SAYIYMVIDFWG--VLEEN---------------------EVHVGF--SS-------------------------------KFRDESDDISYTLLADCDV-LVARSPAHFV--SDVQKVRAVFKPE----------LHA--------------LKDVIVFSAKGN----IPLADKLSGGDYDGDMAWVCWDPDI--VENFV-NADMPDEPDLS-----AYLGKDK---------TTFEELV----------LRTGQTGNRARYEAVYDMINK----------------------------------------------------------------------------------------SFQF--AMQPN-YLGICTNYKERVC---------------YHNNSVNNRAAV---------------------------LLSSLVG----KLVDQSKQGII---------FNAESWDRLRRDYFYGKM-------FFDD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P---AYKGD---------------HWGGTEEPQHIIDYLKFSIAKPA-------------------------------------------------IDRELQSFHESMAAAKGSAAEA----------------AGEGAHFWDPDL--------------------------------------------------------------AMYYEHVKT--------LTKTSRSLKSVLDGLNN-------AICGVEREWKRLIPF-----------------------------------RDGSLGYPE-------------KVKRVYAKWLEIDLASVSNAGSNTLDSKTVGLLGQPYLAERGASATSLWELI--KASAAFKMYYQMNP-------------------------------------------------------------------------------------------------------------------------KFVWQI----------------------------------------------------------------------------------------------------AGCQLAFIKAQVVSGRAGGGSDGMAL-----LVTPHMYAGLTPDGRFV-------KQYVARLEGDGSEYPVVDDDEETGGGGGRGDDVD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1372]
'gi|3875716|emb|CAA88315.1| Hypothetical protein F10B5.7 [Caenorhabditis elegans] >gi|17533045|ref|NP 495713.1| RNA-dependent RN'    MLPFDNDDSSDDATTSVRPKHPRGVPQSQSTFPRGRSNFSSGTLPNRKTECTPVNTLTIGHSNKMLLTTFRMDRNSKSKSEVDVQEQP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VHSSSSAFPGN----HLNNFSYP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VN-----RGYLRDYLLQSQRPS---------------------------------------------------------------------------------TSKPVDCSVLKRHSLPSTHILYEKTKHRGGVNIEEQEKLVRMLWAAAEESETVAKTRQFSKKQAIELNFDAKLIGSMNNDCFGYCRAHMENIKDVLKTHLKLSKVDEVNWIKVGMVPRAAYEDKSYVIDAHLVLTPNGEVEDENELFSEFASSFTSRITGMLHDQVFLEVPKMHTLFTKITPQHMDINI----------------------------------------------------------------------------------------------------------------------------SAIAIGNCPNSGLFLVRGDFISQENTVCSVKLQSHHN-ADASRENSSFKVAGSNKYLSYARFEHDKRLAVVYFGVRLAEFADDGLDHA-------------GFRLNLYYNLFVRIVVDM-----------SHETTNSIYIQMKN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PP---HLWEGIPKNTIFHPSKSKVLNM---ETCTEWTRVLS-----------WPGDAEGRGVGCTSEAFSQSSWIRLTMRKDDDNDS------VSSTQLMDIVTRLSARSKAKVMFGSIFSIRRKLAPSPAFHSLG--------------------------------------------------------------------------------------------------------------------------------------------SFRANYALQALITRGSVFTDQL-FDATDENIPSSDNDNDEDDDDDVDDTKKPMELVHEPLFLKLVRRGMKE-------CSQATEETLEQLLNA------------FDERRQIDVVTAFTTMYQSRKIQYERLLKGESLQDVGLAKPLPKN--------------CVSVAKVIVTPSRILLM-------------------------APEVMMVNRVVRRFG---PDYALRCVFRDDNL------------------------------------------GRLAIRDFSINNID----------HMSNIVTEGIYLTLKNGIQV-------ADRVYSFLGWSNS-----------------QMRDQGCYLYAPRVNALTG----------------------------------------------------EVTGTVEDIRVWMG---DFRD----AI--SVPKMMSRMGQ-----CF-------------------TQAQPTVYSSVKNIHIVENIQVRLERHHWIV---EPDIEGGV---------------ENK---YCFSDGCGRISIKLATHISKILQL--------------------------KE----------------VPACFQVRF----KGFKGILVI--DP---------------------------TIDDIINMPKVIFR-KSQQKF----------------GEGGGELQ---------DEY-LEVVKY-----------AMPSPVCLNRPFITILDQVSEKQSASSHRRITNRV-HYYLERELCSL---------SNMLINENQAAEE---LVNRTNLA------------------------IDWNAASKRAGFELS--VDPLIRDMLFSIYRYNI-IHHISKAKIFLPPSLGRSMYGVVDETG--LLQYG---------------------QVFIQY--SP----------------------------------SIRQTSNRPILKTGKV-LITKNPCHVP--GDVRVFDAVWQPA----------LAH--------------LVDVVVFPQHGP----RPHPDEMAGSDLDGDEYSIIWDQEM--LLD---YNEEA-MVFPS---SS----AA-----------EEDKEP------------------------TTDDMVE----------------------------------------------------------------------------------------FFLR--YLQQD-SIGRMSHAHLAYA---DL-------------HGLFHENCH---------------------------AIALKCA----VAVDFPKSGVP---------AE---------------PLSS----FEQC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EMTP---DYMMSGG---------------------------------KPM---YY--------------------------------------------STRLNGQLHRKARKVEEVLEEF-------------------------------ETRGSVFEREYDK-----------------------------LICPEDV----DVFFGNEIKLVQTLT-LRDE------YVDRMQQLLDEYGI-------E-----DE-ASVVSGHAAS---------------IKRLAGM--ERDDYSFYHTDKVVEL-------------RYEKLYAVFRAKFFE---EFGGE----------EINIENDGKNTRLKCTKAMHEKIRQWYFVAYVQPKINK---------------------------------------------------------------------------------------------------------------AGRCIGQSLPW----------------------------------------------------------------------V-------------------------------AWDALCDLRRQLMLDKNDAVLRGKYP-----IAARLEEEIENS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IERQFDKFLKLKDLIESHKDALFLRRYVYFYGDQIIKMLFILKVWLERENVLPSSVLSIWQLGRLLIRLGLGDLLGNPTIDYEKSLLMPTTMFQQWISKKEDADEAPI----------LRNFDMGTMMLEFLRYLASQSFASAESISLRVFYEKDIVEPILTKSAQWMPLHLIAYRTFHSIAVSGRFDALHLDDEDAVDQITESKDPILVNESLFSSRNYNDDYPISRSRILQSLKDWSGVKEIIPREITGTRKSDMIYVTSVGTVLARQRLARLLLLSGETIRDAIANNVVPNEVRDEFL--------------------   [1780]
'gi|39587252|emb|CAE57720.1| Hypothetical protein CBG00730 [Caenorhabditis briggsae]'                                    -----NGESSEEAITVIRPRHPRGVPQSQSQFPRGRSNFSSGTLPYRRSESTPVNTLATGHSNKQLLTTYKIDRASGSRQRMD-SDYL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DPSTSSAFPSNPPSARLNNLSLP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VN-----RGYLQDYHLYPQRPS---------------------------------------------------------------------------HYNNQRYNNNHNDGNTKRHSLPSTHILYEKTKHRGGPNVEEQEKVIRML-RAAEESEALAKP-AVVKKAPIELSLDVKITGSMNNEMFGYCRTHMETMKEFFSGKLKESNIDEVNWMKTGMAPRAAYEDKAYVIEAHLILTPSVAAFDKNDLFAQCITKFTRKTKGMLQDQCFLEVPKMHQFFPKITPQHVDINV----------------------------------------------------------------------------------------------------------------------------SAIGLGNCINPGLFLIRGDYISNDNTVCSVKLQSQHNPSDASREFNSYKVAGSSKYLSFARFEHDKRVALLYFGVRLSEFADDGLDHA-------------GFRLNLYYNTFVRIVVDL-----------SAVNTNSIYIQLKN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PP---QLWEGIPKSTMFHPSKSKVLNL---ETCTEWIRVLS-----------WPGDAERRGIGCTPEAFYQSNWIRIMFRKETDDEK------LCSANLIDVVTRLASRSNAKVSFGHIFSIRRQLAPSPCLASLG--------------------------------------------------------------------------------------------------------------------------------------------SFRANYALQALITRGSVFMDQL-FDCTDTNIP--DPLEPEDEEGEGELLKQPMNLKDEPMFLKIVRRAMRE-------CPQAAEESLEQLLNA------------FDERRSIDVIFAFSTMYKTRKVQYERLLNGESLQDVGLARPLPKN--------------CVSVAKVIVSPSRVLLM-------------------------APEVMMVNRVVRRFG---PDYALRCVFRDDNL------------------------------------------GRLAIRDFSINNID----------HMSNVVTEAIYNTLKNGIQV-------ADRHYSFLGWSNS-----------------QMRDQGCYLYAPRVDPISG----------------------------------------------------KVSGTVEDIRVWMG---DFRE----AV--SVPKMMSRMGQ-----CF-------------------TQAQPT---------------VKLARHHWLV---EPDMEGGP---------------GNK---FCFSDGCGRISYKLAGQITRKLKL--------------------------KE----------------IPACFQVRF----KGFKGILVI--DP---------------------------TIDDIINMPKVIFR-KSQQKF----------------GEGGGDQQ---------DES-LEVVKY-----------AMPSPVCLNRPFVTILDQVSKKQSAKCHQRITNRV-HYYLERELSSL---------SNMLLNENQAAEE---LVNRTNLP------------------------IDWNLASKRAGFQLS--VDPLIRSMLFAIYRYNI-IHHISKAKIFLPPSLGRSMYGVVDETG--LLQYG---------------------QVFIQY--SP----------------------------------TIRQTSPEPLLKTGKV-LITKNPCHVP--GDVRVFDAVWQPA----------LAH--------------LVDVVVFPRHGP----RPHPDEMAGSDLDGDEYSIIWDQEM--LLD---YNETA-MVFPS---SQ----AQ-----------EEDKEP------------------------TTDDMVE----------------------------------------------------------------------------------------FFLR--YMQQD-SIGRMSNAHLVYA---DL-------------HGLFSENCA---------------------------SIAQKCA----VAVDFPKSGVP---------AE---------------PLTG----FEQC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DVTP---DYMMSGG---------------------------------KPM---YY--------------------------------------------SASLNGQLHRKARKVEEVLEEY-------------------------------ESKGSIFEGEYDK-----------------------------MICPDDA----DVFFGSEPKLVQTMN-IRDE------YIDRMQQLLDEYGI-------E-----DE-ASVVSGHAAS---------------IKRLAGM--ERDDYSFYHTDKVVEL-------------RYEKLYSVFRAKFFE---EFGGE----------EAHTVNDGKGSRVVCIPAMHEKVRQWYFAAYVQPKKNK---------------------------------------------------------------------------------------------------------------TGKYIGQSLPW----------------------------------------------------------------------V-------------------------------AWDVLCDLRRTLMLQIDDAIPRVKYP-----IAARLEEEMEKS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IESHKEKFEALKKQLATKKEAHFMRRYQHFYGPQIIKMLFIIQQWLEREKVLPSKSLTIWQVGRLLVRFGLGALGGNPTIDYEKSILAPAVVFKKWITKKAGGDEEPI----------MSRFEMGSMMIEFLRYMASQSFALANQISLRVFKEMEIVEPSLLYSYQWTPMHNVAYRTFHSISVSGRFDALRLDDDGAEEQVSESKDPILVNESLFSNRNYSDTTPITRPRIFGALKDWSGVKEIISREITGTRKTDLVYVTSVGTVLARQRLARLLLLSGEAIRDAIVNNVVPPEVRDDFI--------------------   [1766]
'gi|39581291|emb|CAE72312.1| Hypothetical protein CBG19448 [Caenorhabditis briggsae]'                                    ----------HGFIKLEFPESTNSRKEMEIVIGKLLAGLPESLQRYGIQIEREHPMQVVQEEDCDACFEVNYEVTCEEFKHNIINAMQRYMDGWR--HCVAYAKPT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILLHSLDFWRTTLHLQVNDVPL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAIYFGNIQGNAFINHYEVSFWKENE---------------------GKSIRRKTPMNNITVDFEFDKCDMICVNFQCVQIEEDRNANAGGDKRNQFNNSI---------SIRRIIVDT------NVTDRY-GDRTRVHFELNC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PP---LIRKGIINADHAD-NPYVKPFYQRWKVIKK-EWDGHGWP--------------------NEAAISDSPIFTVDFDPI-----------VQNFELHRILSRLRVRTGVSIEFGMLPAISVPMCKRWPYHRWTIKDGKQLAAADTDAPIFRDFLADLFPKKFEVNDDDKLI------------------------------------------------------------------------------------------------DVNDERKFSITYLIECLISRGAVVKDQI-----------------------------LLDEQHWRSFLGIIWRYYKV-------DDKLCESALEDLIHL-----------VDGRKRIGSIIKCFDKICQKRQRMQLINCLSESEI-RSG---------------------FQRVRKVIFTPTRVIYI-------------------------SPETIMGNRVLRKFD-KDGTRVIRITFRDDNN------------------------------------------NQMRAN------------------DTGDLLEMTANKFLGEGIRI-------ANREFGFLGCSNS-----------------QMRDNGAYFMAKYSQSQLEKFLRTRPNEAQLK---------------------------------------AFKPRIMEVRKHLG---KFDK----LE--NIPKLMARMGQ-----CF-------------------TQSRLT--------------GVELNRSDYIR---IPDFEGGKNLA------------GKP---YTFSDGVGIMSYRFAQKVAHAMQM-------------------------GNS----------------VPSSFQIRF----RGMKGMIAI--DP-----------YMDLIHQWNVSYDIPYQVPNL--ELKCAFR-PSQIKF---------------------EAK------SLPGDQ-IEMVKY-----------SAPVMVALNKPFINILDQVSEMQSLECHKRVTGRV-EELMDRQILSF---------ARQMNDETYCRN----RLKEFPRR------------------------IDIDFLRPMWGFTLS--SEPFFRSLIKASIKFSI-TKQLRKEQIQIPKELGRSMLGVVDETG--QLQYG---------------------QIFVQY--TQ----------------NAAKKLP-------MRGP--NMTVPDAKIVTGTV-LVTKNPCIVT--GDVRVFEAVDIPE----------LHH--------------MCDVVVFPQHGP----RPHPDEMAGSDLDGDEYSIIWDQQL--LLD---RNEDP-FDFSV---EK----KD---------PVPFDFDQ------------------------IDDLMRD----------------------------------------------------------------------------------------FYVK--YLKLD-SVGTISNNHLHNS---DQ-------------YGLTSTVCM---------------------------NLAKKNS----QAVDFTKSGDP---------PAPLTREWGKDPETGENIPPE-----GAE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RI-P---DYHMANER--------------------------------VPV---YV--------------------------------------------SPRLCGRLFREFQAIDNVIKIS-------------------------------EERDEQFEVQIDE-----------------------------TLMIQGY----------EAYMEGARK-DLAN------YNGQLRAIMETYGI-------R-----TE-GEIMSDCILD---------------MRNRISDRDQDDKMSFYNTNQMIET-------------RTTALFCRFRENFFK---EFHGFQAACTE-IQNSNDSTNPLNFRCDGPSVPMLQKAVAWYRACYEFAQSSRETRKL-----------------------------------------------------------------------------------------------------------------SFAW----------------------------------------------------------------------I-------------------------------VFDVLAKVKEHNMLHGENVEMGGGNP-----MYIFLEAHRAQY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IADNFEEFQEFRTMSCLIE-DDRSVKGVNILRRYMARYDGLDTVLFVLMKWGEAMHLFHNQPIRKYQFFLMFILFATRQIGLADLLSETFIARIVEDDVEN-------ASTVPL--------TEDKKSHMVCRKEKKRMSKFLEFMACRKFRKLRSISFRALGIPGVYMRGEWHIFHVASIKTYYNILFNLRFEELPISTDPTITLESMIRESEPYTIELPERTEANECLKMLTTKSGCQEVHMRMQSNRAEDKKRADEENVRYMVSARGNVESLQRLKQLTAVTIPIRSHIGGKEVASQMANLCLDKIM-----------------   [1606]
'gi|39972761|ref|XP 367771.1| hypothetical protein MG07682.4 [Magnaporthe grisea 70-15]'                                    M------------SRPQPTGAQIARADVVAAMTRLNE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LYDLALE-IPTRSRSPKPRKG-------KPPEFSDAIYDKLQLLYSQGS--IESVLNRFDTCIRRKNRLERSQDH-------------------------DRQLLQDVLHQCCSP-----------------------------------------------------------------------------------ELAESDKHSHPRRSKRLSNDDEGEDISPKRCRKIQLHKLDVVQTRALAKPGPGRGPRPRTLTARESDEQQESANTSRTSIAPSIFSEG--------------------------------EDFGATQTTAEASSQETK---------------------HVLRPSSKALLEREPADFDFEPNSDEAQAFEEAHECFPKSDK------------------------------------------RDARNMSSPILSSFPESLVSDPSKPELRLNAAQRALQDRLDLVWPRLP------EWLHSAPLAIAWEVTRIALHCNIELSDI-KGLAYDQSWDNQKTLRSV---LYQHPLFQGKAFPEQCSLDAWNAAVKNF--------------------------------------------------------------------------------------DKIVLSAELDRNP--APTGAFFILKL---------------------KAFTIEQSHRLGRRFG---EDRFLEVLSPSNAS-----------------------------------------------------------------SIKDPDLLPTLNNWLCHGKHR------FVGCKWAAFFTKDAGYRRPAREVRL-GPDPKPVFKDRIYFFAEDGNRFQSHHHAANASFSGYLFT-------------------------------------RTALPVHSMLNWLL---QLDLVKNQRQ--PWPKLFSRIQLGYLGSGL-------------------SRTHPT----------V---VFA--PLEIHAE--EHDLMS-----------------PAG---NVMNDGIGLMSRSVAREVQQILGI--------------------------QD----------------LPCAVQGRL----GSAKGMWII--DP-FDQSD----------------------------DRWIKTY-PSQRKW---------------------NCT----SADSHHRT-LEIKTH----------AKPLRSASLNLQFLPVLHDRS----------KHKHGMRDSIGELLRTSL--------RTELESVQVALRSPQQFLQWVHENSNHRQGLGNTSFEVPRLGGLPERDEDVMAEMVRAGFNPR--GQKYLQDIAWNIQKQKC-ETLREKLNIKVGM--STYALMVVDFWG--VVPEG---------------------EVHLCF--SE---------------------------------KFTCDGFSGTLLNDQEV-LVARSPAHYV--SDIQKVKAVFRPE----------LKD--------------LKDVIVFSRNGN----VALADRLSGGDYDGDIAWVCWDSKI--VDNFQ-NAAVPDSPDLF---RQGYLSKIP---------GTMSDLV----------------RELGLEKGTGEMIAR----------------------------------------------------------------------------------------GFEF--NMRQN-FLGICTNFKERLC---------------YKRKNVNDSVAV---------------------------LLSTLVS----NLVDQGKQGIV---------FDAGSWRRLQMELHPGPG-------FLEL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P---LYKEN---------------SWRGTRLPEHIIDHLKFTVAKPL-------------------------------------------------IDKELGDFSKSLQSK-----------------------SGEKAHHWDKDL--------------------------------------------------------------VEVCNYWDG---------MRSSKSVEKLLDALKS-------DINAVAVLWKKVMAGARDG-------------------------------DRSRGEYRR-------------RINEVYEAWLDIKPA--VHLHRSLPRSKTVAMLLQSYLHP----EQTTWALL--KASMAFKYHVEKNS-------------------------------------------------------------------------------------------------------------------------SFVWKI----------------------------------------------------------------------------------------------------AGAQLMLIKAMAGGRQPA-------------PVTQGMIPFLRPDKKMI-------DRFTAVQEGTESLYESGNAGTDYGGDDLFDDASLWCHSILKPDKNEPTVRWRLSAEDGRQSRLSLFALDRLAGPPIALPINLLTSHFYAPRGHLNMHYLLGIAGVVSIAALAAASPVENAIPGGVFTIPQQKNKHFKESTGLDALLHAFSKYNATLPPRLRAAVEINPRIRTKLRQRTYLACTPLRFCEAKMNGSLHVNLGYFVQFREQHVWVCTGRTAGPL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1453]
'gi|46133873|ref|XP 389252.1| hypothetical protein FG09076.1 [Gibberella zeae PH-1] >gi|42555283|gb|EAA78126.1| hypothetical pro'    M----PPPKIDKA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FAFTLLP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VL---SLDDNVW----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DFSVPNLPSASLLKDAGY--------------------------------------------------------------------------------------------------------------------------------------------IKAISIRTDLKDCKHSMVL-------------------------TLQANSPNRATAQHS---PDILLLLSLESFKP------------------------------------------------LIVGAAAKEHLPAPDLQPRTRQEVSDYSIRCLRAGISI-------NGVHYNFYGHSNS-----------------QLKSRSCFLLA------------------------------------------------------------ATKEGISRQIESLG---DFTK----MK--TVGKKAKRIGL-----LF-------------------SSAKTA----------M---TIN--PDRCED---IPDVE------------------TAD---YIFTDGCGLIAPSLAQELSRRTRI-------------------IFRD--TRY----------------TPSVFQIRY----RGYKGVVTV--DT-R-------------------------MKKQ---KALLKFR-KSMKKF---------------------SGG---------DDHSF----------------APFSYGFLNDETIILLHALG----------ISQETLLAKQRRHFDLL---------RNAKTDHRDAFR----LLSYSN--------------------------RPDLAERVLLDGSDS--IKPQINSIVNAELKKMLNKKDGQRCRIFVQK--SRLLFGVCDAWD--VLREG---------------------EVAVKV--TM------------------------------------EETGVPHALKNTEV-TVIRNPCLHP--GDWQKFKVVERPE----------LAH--------------LTDCIVFSTRGK----RPAADMMSGGDLDGDTFFVCWDPDL--IPS---TISTP-ALYPG---------GRD---------PITFRPI------------------------TDDDRLV----------------------------------------------------------------------------------------YFAK---YNNA-SLGKVKNLYLDWA----------------RATGPMSAQCQ---------------------------ELNRLFS----QCVDGNRIRIP---------EK---------------LQSP----PKSP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDAP---PFILDILHSESRDQAHSLSLSQNGD-LDGYDIDAIQLLLSRQDVAISEFECIKLAHTWCLKNKTSFENLLHLFDFNLLTAEQKAWVLAHAPPSPSTPGLVLNALCSSGILEPNE----------------LKY---------FRLDYPGIQWKRMFDSSIDRLATFHDAVATNMELFHRTLIVFQPDERLSLAIYIPKKIERSQDCVIDDTAR-LFSFPHSQGPQTQARLSLPTKMDY-------QVYCDGSL-FQLYQKSKRNTWVFINRPGQNDEDYRDEKNKGDRRRKRQEVVDRGEQAEV-------------VASVDLGKFSGQLARHIGRV-----------------------------NRSPVTAAEIYVISNRDVSSMRNLDLWLEQIDTTEILPLFSNEPKIYSIPDRDNVFSTSDPSWLISIVKGNDLALLTSLESVDQYHQVFTSVRKANDTEFM--LRCFQHILENIQISAVDSKEILNAMLEILVSEPVLAISFTPFLSDACTDKDPDLVSLVEASLLPILRAFILSSNTMDNLILEPLKAIISNISLGSLSTSDIVDLLELAALTIRSTDLALDLFLDILQPNAPRFMTADVKVAKYLLRNLMAIAVEHIEEANAEAKRLPGL-----LEMKLSPKDKDG----------------------------SLVDIDFRIDATGTPKQGSHVRLTTASLPENVLVGDNYSIDALVVFAETGRARFKCLHPLPNYFEQCSWVLEDCGPFVTCKSMTDAVKDLCIYRDNCCGVADIVFGLESATFLPRSEATCSKI-------DKLNESQNKAIQLALESSLLCLWGPPGTGKTETIVEMICALQIANEKARVLVTAPTHNAVDNVMRRYIKQIQEQPLARKVQPNVLRVSTEVHKVSDDLRKYTCDAMAGQEIHGDYKAMKKATQMIKDSDTVFTTCIGAGIGLLRSEFFDIVIVDEASQQTEPSSLVPLVKGCSKAILVGDHVQLRPTVQQTSLALDFDVSLFERLYTE---------------AGGSTESGFNTMMLDTQYRMHPKLCEFSSGAFYEGKLKSGIGISDRPLIKSEFPFPLAVLTKQSGDSGKTDYERAIFVNCDTKEIQGKSKENKGQAELCLHICKLLTSQNDTQSIVVLTPYTRQAESLKRMLPSTIEVSSIDGFQGREADVIVFVTVRCNEHRSIGFLKDMRRMNVALTRARSAVIVIGHRATLTEGTEDEESSAMWKWLLRSLTEVKVEVPTSGDGPTDGLKGR-------------------------------------------------------------------------   [1721]
'gi|14530419|emb|CAC42290.1| Hypothetical protein F26A3.8 [Caenorhabditis elegans] >gi|17508703|ref|NP 492131.1| RNA-dependent R'    M-----SERSHGFIKFEFPEFDNSLQVIEGSIDTMLLTFTSVLRKYEIEIKSRQETQIVEEQDCDCFFEINFEVESEQFDHTIIDAMHDYLSDLNV--YVPYQRPN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVLHGSDFWLRTLDCH-TEIPL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAIYFGNIQGGTYFNHWQVSFSRE-------------------------NISSRDMLHKIHAEFEFDKTDMITVQFQCFEEKK-----QKFEDSRKQKVRVNYQLTIRRDSIRRIIVDP----------RVEGCNTCVHFEVNC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PP---LIRKGYIDNDKSSFHKPFYERQKRFDCDWRNGNVNHGNP--------------------QDAAIADSPFFTIEFHKE-----------ISTKEMYRVLSRLRSRTKVLIEFANLPSIDVPMGSHYPYNRWNLKK----SPTDSNAPIFREFLKEIFPPKYEIV-DDKLI------------------------------------------------------------------------------------------------DVNEERKFSITYLIECLLSRGAIVKDQL-----------------------------LLNEQHWKNFLEIIIWYYRN-------DNQLCEAALEDLVHL-----------IDGRKRIGSILKCLDKICQKREVMKLVNGLTEKES-IEG---------------------YQRVRKVIFTPTRVIYI-------------------------APETIMGNRVLRKFD-KDGTRVLRVTFRDDNN------------------------------------------KKMRSN------------------VTGKLLDRTANKYLEHGVRI-------ANREYGFLGCSNS-----------------QMRDNGAYFMMRFTDKQLDRFYKCNPTASNI----------------------------------------NFKPKIDEVRFQLG---RFSE----IE--NVPKLMARLGQ-----CF-------------------TQSRLT--------------GVGLGRDDYCS---TYDLTGGRATN------------GSE---YTFSDGVGMMSYQFAQEVSQAMQF-------------------------GKA----------------VPSCFQIRF----RGNKGVIAI--EP-----------FLDEIRKWALVNGVTSMK-----MAKCLFR-PSQIKF---------------------QAK------AISGDQ-IEMVKF-----------SSAVLVALNKPFINILDQVSEMQSLDCHKRITSRI-EELMDRQILSF---------AKQMNEETFCRN----KLKEFPRR------------------------IDIDNLRTMWGFTLS--SEPFFRSLIKASIKFSI-TKQLCKEQIQIPSELGRSMLGVVDETG--RLQYG---------------------QIFVQY--TK----------------NYKKKLP-------PRDS--NNKVHGSEIVTGTV-LLTKNPCIVP--GDVRIFEAVDIPE----------LHH--------------MCDVVVFPQHGP----RPHPDEMAGSDLDGDEYSVIWDQEL--LLE---RNEEP-FDFAV---EK----IK----------VPYDREK------------------------LDVLMRE----------------------------------------------------------------------------------------FYVT--YLKLD-SVGQISNSHLHNS---DQ-------------YGLNSRVCM---------------------------DLAKKNC----QAVDFTKSGQP---------PDPLETKWRADPVTFEVIPPE-----NPE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RI-P---DFHMGNER--------------------------------SPM---YV--------------------------------------------SPRLCGKLFREFQAIDNVIKIS-------------------------------EERDEQYNIELDE-----------------------------TIFVTGF----------ERYMESAQK-QLSS------YNGQLRSIMENYGI-------R-----SE-GEIMSGCIVE---------------MRNRISDKDQDD-MSFYNTNQMIET-------------KMTSLVCKFRETFFE---EFGGFTVKCTL-LPNAYDNGNCLNYRCEDPDQEVRKKAVAWYRACYECAQSTREVRKL-----------------------------------------------------------------------------------------------------------------SFAW----------------------------------------------------------------------I-------------------------------AYDVIAKVKETNVLNNERMQIGGANP-----MYTFLEEHRKQY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LIDHDADFKNFCELDHLIT-GEKSKEAISILKIYLEMIPGLDSVFFMLMRWGESLRLFDGKPIKIYHFFLMFILFATRQLASADGNAEPFFKIIEKEEYEKQKRDSSRGNIDPL--------TEKKRSDM--------MVKFFQFMGCRKFRKMSTLSFCPLNFSSIFMRGEWRIFHESALKTYYNILFNLRFEELPVSSDPTITAETMDRECEPFVIELPENINVNDLINNMKKHTNVSTVKMRRQEKNPINDKAKPKTTVRYIVSVSGTLESIQMLKKLSAVTIPIKSHWEGEEVSQQMASLCYQKVMNGEF-------------   [1601]
'gi|4803727|emb|CAB42634.1| RNA-dependent RNA polymerase [Neurospora crassa] >gi|85091735|ref|XP 959047.1| hypothetical protein'     M---------------NPITPRKRNSPVEEIINRLNN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DYNLGLQCVADTTLTPHRRKELAESD--EDFGRHDKIYRALNFLYWRKDDSLNQAEANFFIEAKAASSNWVPKAHADPDT------LPWSKEPPRAATAGQQWALQTVLLEVLNRFMPPPNNTPGRTFGRTLSGPSGLSRPT----STNTKRKDEPANVTFADPPKRSLTRSATGPPIHGAAIPLKFPDPVNTGSKRPSLESENLNQCTKRAKGKLSDNVAAAAAPP-----VPIASALDKVPTRR---HANTRDPTATGHRRADQVDSFDTSQGTSYGSSVFSACR-------------------------------HNQSTTQSSFEAPPSQPREKRPVDATV--------FEAGHLIESPSKGRTTKSHIDNQPLSSSSQGETSFSTYYESFPSSG----------------------------------------------GEGAIPEPSRSNGLARSEESARSQVQVHAPVVAARLRNIWPKFP------KWLHEAPLAVAWEVTRLFMHCKVDLEDESLGLKYDPSWSTARDVTDIWKTLYRLDAFRGKPFPEKPPNDVFVTAMTGNF---------------------------------------------------------------------------------ESKGSAVVLSAVLDYNPDNSPTAPLYLVKL---------------------KPLMFEQGCRLTRRFG---PDRFFEILIPSPTS---------------------------------------------------------TSPSVPPVVSKQPGAVEEVIQWLTMGQHS------LVGRQWRAFFAKDAGYRKPLREFQLRAEDPKPIIKERVHFFAETGITFRPDVFKTRSVVPAEEPVEQ-----------------------------------RTEFKVSQMLDWLL---QLDN--NTWQ--PHLKLFSRIQL-----GL-------------------SKTYAI----------M---TLE--PHQIRHH--KTDLLSPS---------------GTG---EVMNDGVGRMSRSVAKRIRDVLGL--------------------------GD----------------VPSAVQGRF----GSAKGMWVI--DV-DDTGD----------------------------EDWIETY-PSQRKW---------------------ECD----FVDKHQRT-LEVRSV----------ASELKSAGLNLQLLPVLEDRA----------RDKVKMRQAIGDRLINDL--------QRQFSEQKHALNRPVEFRQWVYESYSSR-ATRVSHGRVPFLAGLPDSQEETLNFLMNSGFDPK--KQKYLQDIAWDLQKRKC-DTLKSKLNIRVGR--SAYIYMIADFWG--VLEEN---------------------EVHVGF--SS---------------------------------KFRDEEESFTLLSDCDV-LVARSPAHFP--SDIQRVRAVFKPE----------LHS--------------LKDVIIFSTKGD----VPLAKKLSGGDYDGDMAWVCWDPEI--VDGFV-NAEMPLEPDLS-----RYLKKDK---------TTFKQLM-----------ASHGTGSAAKEQTTYDMIQK----------------------------------------------------------------------------------------SFHF--ALQPN-FLGMCTNYKERLC---------------YINNSVSNKPAI---------------------------ILSSLVG----NLVDQSKQGIV---------FNEASWAQLRRELLGGAL-------SLPD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P---MYKSD---------------SWLGRGEPTHIIDYLKFSIARPA-------------------------------------------------IDKELEAFHNAMKAAKD---------------------TEDGAHFWDPDL--------------------------------------------------------------ASYYTFFKE--------ISDKSRSSALLFTTLKN-------RIGEVEKEYGRLVKNKEM--------------------------------RDSKDPYPV-------------RVNQVYEKWCAITPEAMDKSGAN-YDSKVIRLLELSFLADR---EMNTWALL--RASTAFKLYYHKSP-------------------------------------------------------------------------------------------------------------------------KFVWQM----------------------------------------------------------------------------------------------------AGRQLAYIKAQMTSRPGEGAPA---------LMTAFMYAGLMPDKKFT-------KQYVARLEGDGSEYPDPEVYEVLGDDDFDGIGFTGNGDY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1402]
'gi|72005063|ref|XP 780282.1| PREDICTED: similar to RIKEN cDNA 2810465F10 [Strongylocentrotus purpuratus]'                           M----VMVLADLLTRSVYS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSDSANVSEDPAAFEHVNAVTKLH-----------------------EHLNSLLTITANQDTAFKTLKTQLLEAQRKIEAFSNTFPTTASIPSPKEKRCDSLPLITVEPAEQDSRGSINRGVNITDD--TESEVAAILEKTKTN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SE---NRGRSSSSVSTNDAQMRHVESSPKVNDQNLNRKAYGGELPSDKLLSNSQEEQKSRDRAPSPLPGDKTNAYHSSPKASPRTSSSPVIRRNVPQHLLSTTNQSKTSGQVGLKEPIRLPNKQASTNSAGVQEIQPKKLESLMATSSKPNKNTNAQPQPGSSRKSKTMDSDSEDQYGEDDTDHADHLIATEGDEPLSTSTPQYPHGKKKKRPGLWKRFKHKTKPMRKIGSHVMEKAHHKSHGHSDDENITTTRSRSLLSASEPQLSNKTQNYNSLPRSHRFGGSVIDRSRLFVETDG----------------------------------------------------------------------------------------------------------------------------RPQQYSSDSDSGAARTNGSKLVRRSSSSSSRKIL--------------------------SFDVNNDSRHSKSLP---ADGELELDVPELAA-------------------------------------------------------SPAAVRKRLMDKKHGDQSSSVPESSTHGTTSIPLTNQNNNQQHTSGGSEDDYH---------------RRRSRESSFGA------------------------------------------------------------VTMETNQRGSGDDGVDGGFPSSTQGMSLEEMDERAARFTGVPQPGNFYRLEVHLKEGKDLAVRDWSGSSDPY----------I---RFKINSKQVYK---SKTIVHNLNPRWNEVFSVAIEDVTKPLHIHVFDYDIGTSDDPMGNAKFDLMTL--------KTSEPTEVKLDLSDDTTDEYLGYIVLVFSLIPVNEGEYAAFNLRL---------------------------------------------------RRDNEARSGSQRKG---------------------KSQ-----------------------------------TWIGVVTITLLEGRN--------------------------------------------------------------------------------------------MVPMDDNGLSDPYVKFKLGG-------EKWKSRVLIRAQSLQAADIGGKSDPFC--VLE-----------------------------------------------------------------------------LVNARLQTQTVYKTLHPEWGKVFTLSHIDVAT----------LDMEQTHQLSIELEDNAGTLDILLTISGT-----------VGTENVSDLANYKHDPNL--------KRELC----------------------------------------------------------LKYGLLN----------------------------------------------------------------------------------------SFKDVKDVGWL-QVKVIRAQSLQAA----------------DIGGKSDPFCVLELVNARLQTQTVYKTLHPEWGKVFTFQIKDIHSVLEVTVYDEDKHGSP------------------------EFLGKVAIPILKVK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGERRPYTLKDKKLKRRAKGSILLELDFIYNDIKAAVRTFNPREDKYMEQEQRF-----------------------------------------------------------------------------------KISVLQNNLSRVSNMVTDIVSV------------------------------------------------------------------------------------------GRFINSCFQ-----------WDSKLRTIIAFVAFLIIVWNFQLYMAPLAILMLFTWKFVEQWIVSSYTKPPDEDDSSGDEDEAEEKDKESKRSFKEKLQAIERVCQTIQNTLDQVACLGERIKNTFNFTVPWLSFMAIIVLCVVTIVLYFIPLRYLLLAWGINKFTKKIRAPHAIPNNE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLDFLSRLPSDTQLKQYRELRPELTR-----TDSPKKRK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------   [1287]
;
END;


BEGIN CODONS;
	CODESET  * UNTITLED = Universal: all ;
END;


BEGIN ASSUMPTIONS;
	OPTIONS  DEFTYPE=unord PolyTcount=MINSTEPS ;
	EXSET * UNTITLED  =  1-2119 2135-2137 2152-2224 2238-2244 2258-2274 2286-2345 2360-2362 2367-2371 2373-2374 2386-4885;
END;


BEGIN MacClade;
	Version 4.0  87;
	LastModified -1058898032;
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	ChartWindowPosition  '52' '30' '968' '1620';
	StateNamesSymbols closed Geneva '9' '10' '50' '30' '148' '220';
	WindowOrder  Data;
	OtherSymbols &/ 00 ?-;
	Correlation  '0' '0' '1000' '0' '0' 10011010;
	Salmo 00000001;
	EditorFile  '4';
	ExportHTML _ MOSS  '100' 110000;
	PrettyPrint 10;
	EditorToolsPosition  '769' '126' '115' '165';
	TreeWindowProgram 10;
	TreeWindow 0000;
	Continuous  '0' '3' 1;
	Calculations 0000001;
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END;