#NEXUS [MacClade 4.08 registered to M. Hasebe, NIBB] BEGIN DATA; DIMENSIONS NTAX=29 NCHAR=2188; FORMAT DATATYPE=PROTEIN SYMBOLS = " 1 2 3 4" MISSING=? GAP=- ; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 1510 1520 1530 1540 1550 1560 1570 1580 1590 1600 1610 1620 1630 1640 1650 1660 1670 1680 1690 1700 1710 1720 1730 1740 1750 1760 1770 1780 1790 1800 1810 1820 1830 1840 1850 1860 1870 1880 1890 1900 1910 1920 1930 1940 1950 1960 1970 1980 1990 2000 2010 2020 2030 2040 2050 2060 2070 2080 2090 2100 2110 2120 2130 2140 2150 2160 2170 2180 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] 'gi|42573788|ref|NP 974990.1| HEN4 (HUA ENHANCER 4); nucleic acid binding [Arabidopsis thaliana]' M---------ERNSVKFHAEK------------------------------------------------------------------------------------------RSGAFDPG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGFGSSKRVKTHHTQLLS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALVVPVGH---AAFRLL-----------CPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPS-GSPDRV--------ITIIAQADSKSRVKLGANNNGNAEGE--------------------------------------------------------------------------KKEEEVEVSKAQGALIK----------------------VFEL---LAAEADS---------------------DTVVCRLLTESSHAG--------AVIGKGGQMVGSIR------------------------------------------------------------------------KETGCKISIRI----ENLPICA--DTDDEMV-----------------EVEGN-AIAVKKALVSISRCLQN----CQS--------IDKVRMVGNRPLEKEFQASLHRPIETIIQESLPRSVEVNPYDYRLRNDEIFPRGTVARANDVIPHDTLHLRRIEAVPQGALRM------------HIEADRQDVLRRHVEADRQDALRRRIDVVPQETLYMPSDVLRGDCFRQHRERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQ---ETLRGQSADYLAHRYSTLDTHP-----HSFTTSASMANTATMKPPPSEV-EVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHS---ETGAFINV-GNTLDD--CEERLIAVTASE-------------------------NPECQSSPAQKAIM---LIFSRLF-ELATNKILDNG------------PR--SSITARLVVPTS-QIGCVLGKGGVIVSEMRKTTGAAIQILK----VEQNPKCISENDQV-----------------------------------------------VQITGEFPNVREA----------IFHITSR-------------------------------------------LRDSVFSNSMKNSL------------------------------------------------------------------------------------------------------AKSSSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSL-------HRRSEDSFLSGSHSSVNYSRSVGTDPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDNSHHL----------------------TEAPSRLWASPPPAAPR-----GLSDASGGLSSARAGHVLG---------SGHKSAIVTNTTVEIRVPANAMSFVYGEQGY-NLEQLRQVSHFLFT----------------------------------NLLLVFPIASSKRG----------------------------- [824] 'gi|9759415|dbj|BAB09870.1| unnamed protein product [Arabidopsis thaliana]' M---------ERNSVKFHAEK------------------------------------------------------------------------------------------RSGAFDPG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGFGSSKRVKTHHTQLLS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALVVPVGH---AAFRLL-----------CPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPS-GSPDRV--------ITIIAQADSKSRVKLGANNNGNAEGE--------------------------------------------------------------------------KKEEEVEVSKAQGALIK----------------------VFEL---LAAEADS---------------------DTVVCRLLTESSHAG--------AVIGKGGQMVGSIR------------------------------------------------------------------------KETGCKISIRI----ENLPICA--DTDDEMV-----------------EVEGN-AIAVKKALVSISRCLQN----CQS--------IDKVRMVGNRPLEKEFQASLHRPIETIIQESLPRSVEVNPYDYRLRNDEIFPRGTVARANDVIPHDTLHLRRIEAVPQGALRM------------HIEADRQDVLRRHVEADRQDALRRRIDVVPQETLYMPSDVLRGDCFRQHRERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQ---ETLRGQSADYLAHRYSTLDTHP-----HSFTTSASMANTATMKPPPSEV-EVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHS---ETGAFINV-GNTLDD--CEERLIAVTASE-------------------------NPECQSSPAQKAIM---LIFSRLF-ELATNKILDNG------------PR--SSITARLVVPTS-QIGCVLGKGGVIVSEMRKTTGAAIQILK----VEQNPKCISENDQV-----------------------------------------------VQITGEFPNVREA----------IFHITSR-------------------------------------------LRDSVFSNSMKNSL------------------------------------------------------------------------------------------------------AKSSSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSL-------HRRSEDSFLSGSHSSVNYSRSVGTDPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDNSHHL----------------------TEAPSRLWASPPPAAPR-----GLSDASGGLSSARAGHVLGSLHARLVFSSGHKSAIVTNTTVEIRVPANAMSFVYGEQGY-NLEQLRQVSHFLFT----------------------------------NLLLVFPIASSKRG----------------------------- [833] 'gi|28261405|gb|AAO37829.1| HEN4 isoform 2 [Arabidopsis thaliana]' M---------ERNSVKFHAEK------------------------------------------------------------------------------------------RSGAFDPG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGFGSSKRVKTHHTQLLS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALVVPVGH---AAFRLL-----------CPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPS-GSPDRV--------ITIIAQADSKSRVKLGANNNGNAEGE--------------------------------------------------------------------------KKEEEVEVSKAQGALIK----------------------VFEL---LAAEADS---------------------DTVVCRLLTESSHAG--------AVIGKGGQMVGSIR------------------------------------------------------------------------KETGCKISIRI----ENLPICA--DTDDEMV-----------------EVEGN-AIAVKKALVSISRCLQN----CQS--------IDKVRMVGNRPLEKEFQASLHRPIETIIQESLPRSVEVNPYDYRLRNDEIFPRGTVARANDVIPHDTLHLRRIEAVPQGALRMYIEADRQDVLRRHVEADRQDALRRHVEADRQDALRRRIDVVPRETLYMPSDVLRGDCFLQHRERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQ---ETLRGQSADYLAHRYSTLDTHP-----HSFTTSASMANTATMKPPPSEV-EVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHS---ETGAFINV-GNALDD--CEERLIAVTASE-------------------------NPECQSSPAQKAIM---LIFSRLF-ELATNKILDNG------------PR--SSITARLVVPTS-QIGCVLGKGGVIVSEMRKTTGAAIQILK----VEQNPKCISENDQV-----------------------------------------------VQITEEFPNVREA----------IFHITSR-------------------------------------------LRDSVFSNSMKNSL------------------------------------------------------------------------------------------------------AKSSSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSL-------HRRSEDSFLSGSHSSVNYSRSVGTDPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDNSHHL----------------------TEAPSRLWASPPPAAPR-----GLSDASGGLSSARAGHVLG---------SGHKSAIVTNTTVEIRVPANAMSFVYGEQGY-NLEQLRQVSHFLFT----------------------------------NLLLVFPIASSKRG----------------------------- [836] 'gi|22328051|ref|NP 201244.2| HEN4 (HUA ENHANCER 4); nucleic acid binding [Arabidopsis thaliana]' M---------ERNSVKFHAEK------------------------------------------------------------------------------------------RSGAFDPG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGFGSSKRVKTHHTQLLS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALVVPVGH---AAFRLL-----------CPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPS-GSPDRV--------ITIIAQADSKSRVKLGANNNGNAEGE--------------------------------------------------------------------------KKEEEVEVSKAQGALIK----------------------VFEL---LAAEADS---------------------DTVVCRLLTESSHAG--------AVIGKGGQMVGSIR------------------------------------------------------------------------KETGCKISIRI----ENLPICA--DTDDEMV-----------------EVEGN-AIAVKKALVSISRCLQN----CQS--------IDKVRMVGNRPLEKEFQASLHRPIETIIQESLPRSVEVNPYDYRLRNDEIFPRGTVARANDVIPHDTLHLRRIEAVPQGALRM------------HIEADRQDVLRRHVEADRQDALRRRIDVVPQETLYMPSDVLRGDCFRQHRERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQ---ETLRGQSADYLAHRYSTLDTHP-----HSFTTSASMANTATMKPPPSEV-EVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHS---ETGAFINV-GNTLDD--CEERLIAVTASE-------------------------NPECQSSPAQKAIM---LIFSRLF-ELATNKILDNG------------PR--SSITARLVVPTS-QIGCVLGKGGVIVSEMRKTTGAAIQILK----VEQNPKCISENDQV-----------------------------------------------VQITGEFPNVREA----------IFHITSR-------------------------------------------LRDSVFSNSMKNSL------------------------------------------------------------------------------------------------------AKSSSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSL-------HRRSEDSFLSGSHSSVNYSRSVGTDPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDNSHHL----------------------TEAPSRLWASPPPAAPR-----GLSDASGGLSSARAGHVLG---------SGHKSAIVTNTTVEIRVPANAMSFVYGEQGY-NLEQLRQISGARVIIHEPPLGTSDR--------IIVISGTPDQTQAAQNLLHAFILTGETSLSKKYNLN---------------------- [857] 'gi|28261403|gb|AAO37828.1| HEN4 [Arabidopsis thaliana]' M---------ERNSVKFHAEK------------------------------------------------------------------------------------------RSGAFDPG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGFGSSKRVKTHHTQLLS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALVVPVGH---AAFRLL-----------CPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPS-GSPDRV--------ITIIAQADSKSRVKLGANNNGNAEGE--------------------------------------------------------------------------KKEEEVEVSKAQGALIK----------------------VFEL---LAAEADS---------------------DTVVCRLLTESSHAG--------AVIGKGGQMVGSIR------------------------------------------------------------------------KETGCKISIRI----ENLPICA--DTDDEMV-----------------EVEGN-AIAVKKALVSISRCLQN----CQS--------IDKVRMVGNRPLEKEFQASLHRPIETIIQESLPRSVEVNPYDYRLRNDEIFPRGTVARANDVIPHDTLHLRRIEAVPQGALRMYIEADRQDVLRRHVEADRQDALRRHVEADRQDALRRRIDVVPRETLYMPSDVLRGDCFLQHRERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQ---ETLRGQSADYLAHRYSTLDTHP-----HSFTTSASMANTATMKPPPSEV-EVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHS---ETGAFINV-GNALDD--CEERLIAVTASE-------------------------NPECQSSPAQKAIM---LIFSRLF-ELATNKILDNG------------PR--SSITARLVVPTS-QIGCVLGKGGVIVSEMRKTTGAAIQILK----VEQNPKCISENDQV-----------------------------------------------VQITEEFPNVREA----------IFHITSR-------------------------------------------LRDSVFSNSMKNSL------------------------------------------------------------------------------------------------------AKSSSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSL-------HRRSEDSFLSGSHSSVNYSRSVGTDPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDNSHHL----------------------TEAPSRLWASPPPAAPR-----GLSDASGGLSSARAGHVLG---------SGHKSAIVTNTTVEIRVPANAMSFVYGEQGY-NLEQLRQISGARVIIHEPPLGTSDR--------IIVISGTPDQTQAAQNLLHAFILTGETSLSKKYNLN---------------------- [869] 'gi|87162751|gb|ABD28546.1| KH, type 1 [Medicago truncatula]' M---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSNFLSPPAKRSITGLPDP------------------------NPFPNGSSKRAKPSKPPQQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLPIPAGH---VAFRLL-----------CNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPN-ESPDRV--------IMVIGASNIDGKVMVRSHS---------------------------------------------------------------------------------GDGEAIEVSKAQEALLR----------------------VFDR---ILEVAAE-------------MEGIELGDRTVSCRLVADSAQAG--------SVIGKGGKVVEKIK------------------------------------------------------------------------KDTGCKIWVCK----DNLPACI--SSPDEVI-----------------EIEGS-VSSVKKALVAVSRNLQD----RHH--------ADRTKMTG-----------------------------------------------------------------------------------------------------------------------------------------QNSHEVIHHEALVGVPRETLMSVPRETFIG----APRETLTAVPCETLTDLHVDHLLQRRSALSILP--SSSNSYATGVHSLSAEVNRVSSLEP-KAHQQEITFKIICSNDRIGGVIGKGGNIIRALQS---ETGATVSV-GPSVAE--CEDRLITITASE-------------------------SPESRYSPAQKATV---LVFSRSV-EAGIEKGIDSGLNTG------------SSVTAQLVVSSN-QVGCLLGKGGVIVSEMRKATGASIRIVG----TDKVSKCASDNDQV-----------------------------------------------VQISGEFSNVQDA----------LYNATGR-------------------------------------------LRDNLFGGTLKSAG-----------------------------------------------------------------------------------------------------TRSLSSVQSDTSPYGRLRDVPLG------------------------------------------------------------------------SQSSLRADTNAFVRLRDVPLVGQSSLQADTSPYVRLRDVSLGGQSSLQSDTSPYGRLRDIPLGGQSSLQSDTSPYGKLRDIPLGGQSAVGISHSLSRHTFSQGIDHFSLGRNYDRPSSPGLWTPPRVTGMNSGSINEASWGSTSRKGGLELVRLWICKTN-------------------------------------------------- [691] 'gi|22326692|ref|NP 196518.2| nucleic acid binding [Arabidopsis thaliana]' M---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------E------------------------GKKFGAQSTARAPLPLPQP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PSAPPPEY---VTFRIL-----------CNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKTPLDDSPYRI--------IKIFGHVGSVSRVKLGVIVNNVSNREKK------------------------------------------------------------------------EQEQEVEVSRAQYALIR----------------------VFEA-----------------------LNFGDCTSSTVSCNLLMEGSHVV--------TVIGKNGELMQRIL------------------------------------------------------------------------EETGCNVQLRS----HDLSICT--NPGDVVL-----------------KIEGNRLSAVMKALVSISSRLQA----CPP--------ISTASLHAEAVPDALRRPMEYRS-----------------------------------------------------------------------------------------------------------------------QQYREVDPHGSLHRHVEISQEDALVRPFFRTIT-----------------------------QPRIDYLPHPSYDHRLITSASKNPPVTIKQPLQAS-KDDIRQVDLKILCSNESASVVIKT--------RS---VTDASISV-GDRHPD--CDERLVTITAFE-------------------------KTKDITSESQRALV---LVFSNMY-ENATAKVLDSGLT--------------SSITARLVVRSN-QINCLLGEEGRIKTTIQQRTGAFITVLN----VEQNPKCVSENNQV-----------------------------------------------VQISGEFPNVREA----------INQVTSM-------------------------------------------LREDLINQSFQRGS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------QYAVNYSEDPFPELFSPTAGYTPTFGRSSTMDPNDIFHYS----------------------------------------------------------------------------------SQASSRLWESPVCLCLLPFPSLCLVSLADIHSINIATCCSKKCK--------------------------------------------------------------------- [563] 'gi|7671433|emb|CAB89374.1| putative protein [Arabidopsis thaliana]' M---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------E------------------------GKKFGAQSTARAPLPLPQP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PSAPPPEY---VTFRIL-----------CNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKTPLDDSPYRI--------IKIFGHVGSVSRVKLGVIVNNVSNREKK------------------------------------------------------------------------EQEQEVEVSRAQYALIR----------------------VFEA-----------------------LNFGDCTSSTVSCNLLMEGSHVV--------TVIGKNGELMQRIL------------------------------------------------------------------------EETGCNSLIKA------LLFGS--SSCRIIH-----------GTYARDKIEGNRLSAVMKALVSISSRLQA----CPP--------ISTASLHAEAVPDALRRPMEYRS-----------------------------------------------------------------------------------------------------------------------QQYREVDPHGSLHRHVEISQEDALVRPFFRTIT-----------------------------QPRIDYLPHPSYDHRLITSASKNPPVTIKQPLQAS-KDDIRQVDLKILCSNESASVVIKT--------RS---VTDASISV-GDRHPD--CDERLVTITAFE-------------------------KTKDITSESQRALV---LVFSNMY-ENATAKVLDSGLT--------------SSITARLVVRSN-QINCLLGEEGRIKTTIQQRTGAFITVLN----VEQNPKCVSENNQV-----------------------------------------------VQISGEFPNVREA----------INQVTSM-------------------------------------------LREDLINQSFQRGS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------QYAVNYSEDPFPELFSPTAGYTPTFGRSSTMDPNDIFHYS----------------------------------------------------------------------------------SQASSRLWESPVCLCLLPFPSLCLVSLADIHSINIATCCSKKCK--------------------------------------------------------------------- [567] 'gi|15217969|ref|NP 175569.1| nucleic acid binding [Arabidopsis thaliana] >gi|31711718|gb|AAP68215.1| At1g51580 [Arabidopsis tha' M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EFSTSKRPA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATAAES---VHFRLL-----------CPATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERV--------VLIIAPSGKKKDESNVCDSENPGSEEPKQEKGSECAGTS-------------------------------------------------------------GGDDEEAPSSAQMALLR----------------------VFER---IVFGDDAATVDG---------DELDKGESEGLCRMIVRGNQVD--------YLMSKGGKMIQKIR------------------------------------------------------------------------EDSGAIVRISST---DQIPPCA--FPGDVVI-----------------QMNGK-FSSVKKALLLVTNCLQE--SGAPPTWDECPFPQPGYPPEY---------------------------------------------------------------------------------------------------------------------------------------------HSMEYHPQWDHPPPNPMPEDVGPFNR-----------------------------------------------------------------PVVEEEVAFRLLCPADKVGSLIGKGGAVVRALQN---ESGASIKV-SDPTHD--SEERIIVISARE-------------------------NLERRHSLAQDGVM---RVHNRIV-EIGFEPS--------------------AAVVARLLVHSP-YIGRLLGKGGHLISEMRRATGASIRVFA----KDQATKYESQHDEI-----------------------------------------------VQVIGNLKTVQDA----------LFQILCR-------------------------------------------LREAMFPGRLPFQG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGGPPPPFMGPYPEPPPPFGPRQYPASPDRYHSPVGPFHERHCHGPGFDRPPGPGFDRPPSPMSWTPQPGIDGHPGGMVPPDVNHGFA-------------LRNEPIGSENPVMTSANVEIVIPQAYLGHVYGENCS-NLNYIKQVSGANVVVHDPKAGTTEG--------LVVVSGTSDQAHFAQSLLHAFILCGQS------------------------------- [621] 'gi|34904418|ref|NP 913556.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]' M-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GVHLMTARPTTPARAAAAVEAPVVHGNWELSASFLLLSVSFYTSWARHLMGVVAGEDMASRSTPSKRPFQKNSSE------------------------QNGRGKWQKTKHNSLQQP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLIVQPGV---PIFRIL-----------CPTSKSGNVIGKGGGIIAKIRQETGVKIRVDEVVP-GCDERV--------IVITAIDKDREVSHVQTKENDGGVACSVDGNHGMEKDHTKEEKDESNKEMDDSEKGLGKEEKDDLEKDHDKEDRDESGKDNDKKADDSSVAKDTNSEPEAQLELEKGMPLAVKAILL----------------------VFDR---IFVNEMENGTGD-----------ASGERNHVSLRLLVLDSQVG--------WLLGKNGSVIKQMS------------------------------------------------------------------------TDSCCEIRVSK----DKLPLCA--LPRDELCQILHQKIITYSLHISFLQITGE-LDSVRKGLNTVAQLLFT----HPP--------KESDVLGA----------------------------------------------------------------------------------------------------------------------------------------------HNSGSSRSFFNQPDVLPPGMQP------------------------------------------NLHLPFQGPNVAHLPNFPEALMHGHGSVPPEPLTFRLLCSSDKVGGIIGKGGNNIKSIQN---DTGCEIKV-LDTVPK--SEDRIVFISGPA-------------------------HPGDGISPAQNAIL---HVQRKIV-PTSNTKE--------------------GPAICRLIVSPN-QVGCLLGKGGSIIAEMRKLSGAHIIVLS----KDKIPKGVPENDEV-----------------------------------------------VQISGASEAIQEA----------LMQITAR-------------------------------------------LRNHLFRDRMASTV-----------------------------------------------------------------------------------------------------PNVQPPFGLVDPQFGSYAGNHDSI---------------------------------------------------------SPRIFPNVPQFHKDFIGRPLDEMSAPWTMKGMQVVGDPISLPDIPGMA---------------------------------------------HRGMGGFPGPGQPSIVSTITADVMVPKLVLPSLCGEDGG-CLNRIRSDHGLV---------------------ELLVMMIVWAMKLVTLCVHIYEYACPVCRLAYGRRG---------------------- [774] 'gi|56783855|dbj|BAD81267.1| HEN4 -like [Oryza sativa (japonica cultivar-group)]' --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MS------------------------------------------------------------------------TDSCCEIRVSK----DKLPLCA--LPRDELC-----------------QITGE-LDSVRKGLNTVAQLLFT----HPP--------KESDVLGA----------------------------------------------------------------------------------------------------------------------------------------------HNSGSSRSFFNQPDVLPPGMQP------------------------------------------NLHLPFQGPNVAHLPNFPEALMHGHGSVPPEPLTFRLLCSSDKVGGIIGKGGNNIKSIQN---DTGCEIKV-LDTVPK--SEDRIVFISGPA-------------------------HPGDGISPAQNAIL---HVQRKIV-PTSNTKE--------------------GPAICRLIVSPN-QVGCLLGKGGSIIAEMRKLSGAHIIVLS----KDKIPKGVPENDEV-----------------------------------------------VQISGASEAIQEA----------LMQITAR-------------------------------------------LRNHLFRDRMASTV-----------------------------------------------------------------------------------------------------PNVQPPFGLVDPQFGSYAGNHDSI---------------------------------------------------------SPRIFPNVPQFHKDFIGRPLDEMSAPWTMKGMQVVGDPISLPDIPGMA---------------------------------------------HRGMGGFPGPGQPSIVSTITADVMVPKLVLPSLCGEDGG-CLNRIREFSGAKITVADPMGNAMDT--------AILISGTPDQMHAARSLIQAFVLSEPLAP----------------------------- [449] 'gi|53749469|gb|AAU90323.1| putative KH domain containing protein [Solanum demissum]' M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGQRNNYGKRMQSESD------------------------YSRSDGSKRRTPTDEKE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNSIGPED---TVFRYL-----------CPTGKIGSIIGVGGDIAKQLRTETNSKIRISETIP-GCEERV--------VTIYSGSEETNV----------------------------------------------------------------------------------------SEDTGDLISPAQDALFR----------------------VHDR---V-LAEDLR------------MDEDLEDHQQITVRMLVPSDQIG--------CVIGKGGQVIQNLR------------------------------------------------------------------------SETGAQIRVLSS---EHLPPCA--LNSDELL-----------------QITGE-GAVVKKALYQVAARLHD----NPS--------RSQHQLLS--------------------------------------------------------------------------------------------------------------------------------------------------SPSIFRSGAGFVNPHAGTQVMGVTSLMGPYASYKSD-----------GRSK-----------------------------------SSSVKEFAVRLVCPTENVGAVIGKGGGIIKQLRQ---ESGASIKV-DSAAAE--GDDCIIFVSAKE-------------------------AFEDQ-SPTIDATM---RLQPRSS-EKTEKESGD------------------AILTTRLLVPSS-RVGCLIGKGGSIINEMRNSTRASIRVLS----KENLPKVASEDDEM-----------------------------------------------VQITGDANVATNA----------LLQVLMR-------------------------------------------LRANTFEMEGSFPA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FSPGLSYVPMSASMPDGSRYGNRDNRSRRHGYSSYSGGHDYNDLSPSD---SYGGSQVGGGGN-YAPYGVYSSGRPSSAG---------------------------------------------VSSHNPS---AYGKSYGY--------------------------------------------------------------------------------- [533] 'gi|56744290|gb|AAW28569.1| putative KH domain containing protein [Solanum demissum]' M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGQRNNYGKRMQSESD------------------------YSRSDGSKRRTPTDEKE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNSIGPED---TVFRYL-----------CPTGKIGSIIGVGGDIAKQLRTETNSKIRISETIP-GCEERV--------VTIYSGSEETNV----------------------------------------------------------------------------------------SEDTGDLISPAQDALFR----------------------VHDR---V-LAEDLR------------MDEDLEDHQQITVRMLVPSDQIG--------CVIGKGGQVIQNLR------------------------------------------------------------------------SETGAQIRVLSS---EHLPPCA--LNSDELL-----------------QITGE-GAVVKKALYQVAARLHD----NPS--------RSQHQLLS--------------------------------------------------------------------------------------------------------------------------------------------------SPSIFRSGAGLVNPHAGTQVMGVTSLMGPYASYKSD-----------GRSR-----------------------------------SSSVKEFAVRLVCPTENVGAVIGKGGGIIKQLRQ---ESGASIKV-DSAAAE--GDDCIIFVSAKE-------------------------AFEDQ-SPTIDATM---RLQPRSS-EKTEKESGD------------------AILTTRLLVPSS-RVGCLIGKGGSIINEMRNSTRASIRVLS----KENLPKVASEDDEM-----------------------------------------------VQITGDANVAANA----------LLQVLMR-------------------------------------------LRANTFEMEGSFPA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FSPGLSYVPMSASMPDGSRYGNRDNRSRRHSHSSYSGGHDYNDLSPSD---SYGGSQVGGGGN-YAPYGVYSSGRPSSAGPLPAPFDEASSLRTEDQTNKIEKLVAILALLKMHAKHTYYVKLKRLDGHNRTPFVALKVNSVC--------------------------------------------------------------------------------- [581] 'gi|15237393|ref|NP 199431.1| nucleic acid binding [Arabidopsis thaliana] >gi|21280941|gb|AAM44907.1| unknown protein [Arabidops' M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VERGKRTHNRFRDN------------------------NNDNNRNQRRRLSYESE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKKIDNKDDLVVVYRIL-----------CPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFP-GCSERV--------ITIFCSVSEKKDIVDIEYS---------------------------------------------------------------------------------ELDYSVPLCSAQAALLK----------------------VHDA---IVASLATAAENT-----------KIDRDDFRECRLLVPSSQCS--------IVIGKSGSIIKNIR------------------------------------------------------------------------GRTRANVKVVSKDVSDPSHTCA--MDFDNIV-----------------MISGE-TESVKKALFAVSAIMYK----VSP--------REQIPLDT----------------------------------------------------------------------------------------------------------------------------TVQEVP-ASIIIPSDL---SIYPQAGLYPSQDSIFQHGANVSSFI----------------------------GTLP----QGYGENAANPVPVFSASALPVVHGFGGSSRSEKLAIKVICSSSKIGRVIGKGGLTIKGIRQ---ASGSHIEV-NDSRTN-HDDDCVITVTATE-------------------------SPDDLKSMAVEAVL---LLQEKIN-DEDE-----------------------DKVKMQLLVSSK-VIGCIIGKSGSIISEIRKRTKADIHISK----GNNTPKCADPNDEL-----------------------------------------------VEISGEVSNVRDA----------LIQIVLR-------------------------------------------LRDDVLRDRETGSR-------------------------------------------------------------------------------------------------------NQPPARSENNNFFSSSSSNTGLAL-------------------------------------------------------PQSFMSSVPQVASVDFNRRPETGSSMSMLPSSGGIYGYGSFPVGNTSYGSNSSYSSNLYGGLPQS----------------------------------------------TTMEVRIPANAVGKVMGRGGG-NLDNIRRISGAMIEISDSKNSHGGR--------VALISGTSEQKRTAENLFQAFIMST--------------------------------- [644] 'gi|13605589|gb|AAK32788.1| AT5g46190/MCL19 25 [Arabidopsis thaliana]' M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VERGKRTHNRFRDN------------------------NNDNNRNQRRRLSYESE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKKIDNKDDLVVVYRIL-----------CPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFP-GCSERV--------ITIFCSVSEKKDIVDIEYS---------------------------------------------------------------------------------ELDYSVPLCSAQAALLK----------------------VHDA---IVASLATAAENT-----------KIDRDDFRECRLLVPSSQCS--------IVIGKSGSIIKNIR------------------------------------------------------------------------GRTRANVKVVSKDVSDPSHTCA--MDFDNIV-----------------MISGE-TESVKKALFAVSAIMYK----VSP--------REQIPLDT----------------------------------------------------------------------------------------------------------------------------TVQEVP-ASIIIPSDL---SIYPQAGLYPSQDSIFQHGANVSSFI----------------------------GTLP----QGYGENAANPVPVFSASALPVVHGFGGSSRSEKLAIKVICSSSKIGRVIGKGGLTIKGIRQ---ASGSHIEV-NDSRTN-HDDDCVITVTATE-------------------------SPDDLKSMAVEAVL---LLQEKIN-DEDE-----------------------DKVKMQLLVSSK-VIGCIIGKSGSIISEIRKRTKADIHISK----GNNTPKCADPNDEL-----------------------------------------------VEISGEVSNVRDA----------LIQIVLR-------------------------------------------LRDDVLRDRETGSR-------------------------------------------------------------------------------------------------------NQPPARSENNNFFSSSSSNTGLAL-------------------------------------------------------PQSFMSSVPQVASVDFNRRPETGSSMSMLPSSGGIYGYGSFPVGNTSYGSNSSYSSNLYGGLPQS----------------------------------------------TTMEVRIPANAVGKVMGRGGG-NLDNIRRVCLIFIFIFPSSLLSDCHSFIRLFFPLSYITFSHGKKKT--------------------------------------------- [640] 'gi|21553916|gb|AAM62999.1| unknown [Arabidopsis thaliana]' M--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VERGKRTHNRFRDN------------------------NNDNNRNQRRRLSYESE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKKIDNKDDLVVVYRIL-----------CPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFP-GCSERV--------ITIFCSVSEKKDIVDIEYS---------------------------------------------------------------------------------ELDYSVPLCSAQAALLK----------------------VHDA---IVASLATAAENT-----------KIDRDDFRECRLLVPSSQCS--------IVIGKSGSIIKNIR------------------------------------------------------------------------GRTRANVKVVSKDASDPSHTCA--MDFDNIV-----------------MISGE-TESVKKALFAVSAIMYK----VSP--------REQIPLDT----------------------------------------------------------------------------------------------------------------------------TVQEVP-ASIIIPSDL---SIYPQAGLYPSQDSIFQHGANVSSFI----------------------------GTLP----QGYGENAANPLPVFSASALPVVHGFGGSSRSEKLAIKVICASSKIGRVIGKGGLTIKGIRQ---ASGSHIEV-NDSRTN-HDDDCVITVTATE-------------------------SPDDLKSMAVEAVL---LLQEKIN-DEDE-----------------------DKVKMQLLVSSK-VIGCIIGKSGSIISEIRKRTKADIHISK----GNNTPKSADPNDEL-----------------------------------------------VEISGEVSNVRDA----------LIQIVLR-------------------------------------------LRDDVLRDRETGSR-------------------------------------------------------------------------------------------------------NQPPARSENNNFFSSSSSNTGLAL-------------------------------------------------------PQSFMSSVPQVASVDFDRRPETGSSMSMLPSSGGIYGYGSFPVGNTSYGSNSSYSSNLYGGLPQS----------------------------------------------TTMEVRIPANAVGKVMGRGGG-NLDNIRRISGAMIEISDSKNSHGGR--------VALISGTSEQKRTAENLFQAFIMST--------------------------------- [644] 'gi|50942071|ref|XP 480563.1| putative KH domain protein [Oryza sativa (japonica cultivar-group)] >gi|38636959|dbj|BAD03220.1| p' ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSFDNFV-----------------QITGD-ARAVRKALFAVSTIIYK----CPS--------KETIPLET----------------------------------------------------------------------------------------------------------------------------SVSDLP-PSIIVPSEL---PVYPSSNFYSPSDAAISSGHPSLSIL----------------------------GSTPHVPELTVSADAHSRLPIY-QSVLPVIPAYNTPKCSGELVLRVLCPAGKIGLVIGKGGVTIKSIRK---ESGARIDV-DDSKND--REESIITITSNE-------------------------ATDDAKSAAVEAVL---LLQSKIN-DDNE-----------------------GKMNLRLLVPGK-VIGCLIGKGGSIVNDMRSKTKAAIYISK-----GEKPRKASSSDEL-----------------------------------------------VEVFGEVENLRDA----------LVQIVLR-------------------------------------------LRDDVLRDSVDRQN-----------------------------------------------------------------------------------------------------SEKDGKLTVATTDPLYASSYP------------------------------------------------------------LPALLPYRQQITPLGYDHRGDIERGLE-VYPHSSLYGYSSLQAIDDGYSAVSSYASKGYGGRPPH------------------------------------------------MEMTIPASGLSKVMGKHGT-NLDNIIKISGAHIEIIESKSSRHGH--------VARISGTTEQKQSAENLIKAFIMST--------------------------------- [441] lcl|Smo_HEN4b_8_1_unnamed_protein_product M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EGARYAHKRSHSQFEED------------------------SVDRSVRQRRRGGFERTPE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAPPVDD---VVYRIL-----------CPGAKIGSVIGKGGSIIKSLRNETGAKIKVADGIP-GSDERV--------IFISASPRERREGKPRGGSKEMDKDKEQ------------------------------------------------------------------------NGEESTPLPASQEALFK----------------------VFAR---IVEGEEF--------------DEDEDSSRNVTARLLVPSNQIG--------CLLGKAGKIIEQMR------------------------------------------------------------------------VESGAQIRVLPR---EQLPKCA--YHTDELV-----------------QLTGE-LALVKKALTTISTRLYD----NPP--------RDKPPQAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HLGPFQESTILPGGLGGSTWSYGASAFPLAHGLPGGGRVKD-ETVEGEFAVRLLCPNEKIGSVIGKGGMIIRSIRE---ETCARIKI-ADAVAN--AEERVIHITSNE-------------------------VLHEQVSPALEAVL---QLQSRIS-DPSAEKD--------------------GAMTTRFLVPSA-NIGCLLGKKGSIIADMRRNTRANIRVLS----KEALPKCAHEDDEL-----------------------------------------------VQVLRVYVLPYPPPQETGVYRVLLVDLALS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMLDQHQQLPVLELAEQDLDWWQVLQISGAKVKLHDPKPGSDKR--------IIEISGAPDQAQAAQSLLEACELYYYHYCYYYCYYYLCYYYYCYFKEPHFPMLKPLNL [558] 'gi|50920709|ref|XP 470715.1| putative nucleic acid binding protein [Oryza sativa] >gi|18921324|gb|AAL82529.1| putative nucleic' M----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VGPGHRNSHGKR---HSD------------------------YAENGGGKRRNPGD--D-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TYAPGPDD---TVYRYL-----------CPSRKIGSIIGRGGEIAKQMRADTQAKIRIGESVS-GCDERV--------ITIFSSSRETNT----------------------------------------------------------------------------------------LVDAEDKVCPAQDALFR----------------------VHEK---LSIDDDIG------------NEESDEGLAQVTVRLLVPSDQIG--------CIIGKGGHIIQGIR------------------------------------------------------------------------SDTGAHIRVLSN---ENLPACA--ISGDELL-----------------QISGD-STVVRKALLQVSSRLHD----NPS--------RSQHLLAS--------------------------------------------------------------------------------------------------------------------------------------------------SMTQPYPVGSHLGSSSTAPVVGITPLISSYGGYKGDVAGDWP-SIYQPRRE-----------------------------------ESSAKEFSLRLLCAASNVGGVIGKGGGIIKQIRQ---ESGAFIKV-DSSNTE---DDCIITVSAKE-------------------------FFEDPVSPTINAAV---HLQPRCS-EKTDPESAI------------------PSYTTRLLVSTS-RIGCLIGKGGSIITEIRRTSRANIRILS----KENVPKVAAEDEEM-----------------------------------------------VQISGDLDVVRHA----------LLQITTR-------------------------------------------LKANFFEREGALSG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FPPVIPYHPLPVGVSEGPKYLGRDTKPLGHDYPYSSGYRGSDDIGPIDSYASYGSSQVSGGG--YGAYGGY-SGRSGSSG---------------------------------------------LSGPSSF---SYGKRHGY--------------------------------------------------------------------------------- [542] 'gi|30685276|ref|NP 197031.3| nucleic acid binding [Arabidopsis thaliana] >gi|30685269|ref|NP 851040.1| nucleic acid binding [Ar' M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SPDHRMSPDHRDSHRKRSRPQSD------------------------YDDNGGSKRRYRGDDRD-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLVIDRDD---TVFRYL-----------CPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIP-GCDERV--------ITIYSPSDETNA----------------------------------------------------------------------------------------FGDGEKVLSPAQDALFR----------------------IHDR---V-VADDAR------------SEDSPEGEKQVTAKLLVPSDQIG--------CILGRGGQIVQNIR------------------------------------------------------------------------SETGAQIRIVKD---RNMPLCA--LNSDELI-----------------QISGE-VLIVKKALLQIASRLHE----NPS--------RSQNLLSS--------------------------------------------------------------------------------------------------------------------------------------------------S--GGYPAGSLMSHAGGPRLVGLAPLMGSY----GRDAGDWSRPLYQPPRN-----------------------------------DPPATEFFIRLVSPVENIASVIGKGGALINQLRQ---ETRATIKV-DSSRTE--GNDCLITISARE-------------------------VFEDAYSPTIEAVM---RLQPKCS-DKVERDSGL------------------VSFTTRLLVPSS-RIGCILGKGGAIITEMRRMTKANIRILG----KENLPKVASDDDEM-----------------------------------------------VQISGELDVAKEA----------LIQITSR-------------------------------------------LRANVFDREGAVSA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LMPVLPYVPVAPDAGDRFDYDSRDSRRLERGNPYPGGYGSSG--VSAEGYSPYGAPVGGSSSTPYGVYGGYASGRSSSSG---------------------------------------------LSSHSST---YRRRNYDY--------------------------------------------------------------------------------- [548] 'gi|7671496|emb|CAB89337.1| putative protein [Arabidopsis thaliana]' M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SPDHRMSPDHRDSHRKRSRPQSD------------------------YDDNGGSKRRYRGDDRD-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLVIDRDD---TVFRYL-----------CPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIP-GCDERV--------ITIYSPSDETNA----------------------------------------------------------------------------------------FGDGEKVLSPAQDALFR----------------------IHDR---V-VADDAR------------SEDSPEGEKQVTAKLLVPSDQIG--------CILGRGGQIVQNIR------------------------------------------------------------------------SETGAQIRIVKD---RNMPLCA--LNSDELI-----------------QISGE-VLIVKKALLQIASRLHE----NPS--------RSQNLLSS--------------------------------------------------------------------------------------------------------------------------------------------------S--GGYPAGSLMSHAGGPRLVGLAPLMGSY----GRDAGDWSRPLYQPPRN-----------------------------------DPPATEFFIRLVSPVENIASVIGKGGALINQLRQ---ETRATIKV-DSSRTE--GNDCLITISARE-------------------------VFEDAYSPTIEAVM---RLQPKCS-DKVERDSGL------------------VSFTTRLLVPSS-RIGCILGKGGAIITEMRRMTKANIRILG----KENLPKVASDDDEMVQVNFMVLLLKFSLQFLLSRLRYFTWSVNSNSNFD------------VQISGELDVAKEA----------LIQITSR-------------------------------------------LRANVFDREGAVSA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LMPVLPYVPVAPDAGDRFDYDSRDSRRLERGNPYPGGYGSSG--VSAEGYSPYGAPVGGSSSTPYGVYGGYASGRSSSSG------------------------------------------------------------------------------------------------------------------------------------------------ [568] lcl|Ppa_HEN4b_1_1_unnamed_protein_product M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRGYNGKRPHPLYDGD------------------------FPDRNGRQKRRNEGSYSSRELGGGQFVSRDLPLPM-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VAANLADD---VVFRIL-----------CPAPKIGSVIGKGGSIIKTLRQESGAKIKIADAIP-GVDERV--------ILISSTDRGNDRGRGKDGSGRESRSGVRGRDGRSRERDGGKEGDKKDTERDS------------------------------------------------AQRDSEELTPAQEALFK----------------------VHAR---IIADVETSGIDG--------SDQEEEPSQQVVTRLLVPNNQIG--------CLLGKGGKIIEQMR------------------------------------------------------------------------QTTGAQIRVLPK---DQLPGCA--LPTDELV-----------------QVSGD-VSTLKKALLFISARLQE----NPP--------RDRPQSYA--------------------------------------------------------------------------------------------------------------------------------------------APAPAFVPVTDYLAKDSYRSKGTGHVF-------------------------------GLGPEPLEGRSWTISSGNLSLDRQDNRRSKEGR-DSGENELVFRLLCPSDKIGSVIGKGGSIIHNLRK---DTGARIKI-ANAVPG--SDERVIIVSALE-------------------------LPGDSFSPALEAMI---QVQSRITAEMGGDKD--------------------GIITTRLLVPTN-QIGCLLGKGGSIIEDMRRATRANIRVLP----KDTLPRCALDTDELVQLSRDFKIDYICHECYYFNYISALANVRRSRFGHRKKRENHIDVYEMQIVGDTTVAREA----------LFQVISR-------------------------------------------LRNNAFRESGSETG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RGGGGGRDFGHSMPPLSMSRESYSSSYDFG?------------------------------------------------------------------------------------------------------------------------------------------ [603] lcl|Smo_HEN4b_2_1_unnamed_protein_product M-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VPMAAGKRSYGHMLMNDPGTYPSSDTSKRHQSS------------------------FRRSDSSRGAAIPASQQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLIQQQQE---ELFRIL-----------CPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIP-GSDERV--------IIIGAFDAEGGGDEDYPAGSGGGAPAALDKDDRAMDE---------------------------------------------------------------YTNGRDVACPAQLALFK----------------------VHSR---ILDADKYEDDLD------DSDSVEEDLSEKVVTRMLVPENQVG--------CLLGKKGRIIEQMR------------------------------------------------------------------------EETGSQIRILPR---EQLPVCA--LPTDEVV-----------------QVVGD-RPSVKRALNAISTRLLD----NPP--------KDRPSSAS-----------------------------------------------------------------------------------------------------------------------------------------FQSGNFGGGSRSSGFPASEPYIPQHTSLAP-----------------------------QTRLRAEPRSDSGDNGYQLLRPTAPGLSEFGTGRHLVPMDEELVFRILCPSEKIGNIIGK---FIQTLQE---ETGAKINV-PDAVPG--CEERVIIVSAVEVITGLVSFSRLLPPCDDEELFLSVQSPDDDLSPAQEAVF---HIQDKLR-DDGGETS--------------------ERVVTRLLVPSN-HVGCLLGKGGNIISEMRNSTRAIIRVLD----REQLPLCALDNDEVVQVWFCFSLSAFVCDATRSLD--------------------------FQVLGEIRVARDA----------LVQITSR-------------------------------------------LRANLYREKTDRSD-----------------------------------------------------------------------------------------------------DYGYQRSTSPLSNFGLQASQPPGIQAPRSPPSWLLQQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [596] 'gi|37535712|ref|NP 922158.1| putative membrane-associated protein [Oryza sativa (japonica cultivar-group)] >gi|18071423|gb|AAL5' M-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ARRAASRAVGALRSD------------------------GSIQGRGGRAGGSGAEDAR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HVFDEL-----------LRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILH-GLCKNKLTDDALQ-------MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA---------------KDLFVAFS--------------------------------------------------------------------------------------------------------SNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGVVVVVSGE---------------------------------------------------------------SATTPPPTLKILTCGITVNPFSKTCGITVNPFSKPIVQTGACGQVKEVGKNA--SEERLIVVSSQE-------------------------IPDDPVSPTIEALI---LLHSKAS-TLAEN----------------------HQLTTRLVVPSN-KVGCILGEGGKVITEMRRRTGAEIRVYS----KADKPKYLSFDEEL-----------------------------------------------VQHISLILVDRHAGRAHLLSHQLLTAIYVLVLNRSIVVAEVKNNHGTAACWALAAISYNRTNFSDLLVSHWFIIKASVFSFTLGLQN--------------------------------------------------------------------------------------------------LRTGPAHDPYTVYPVEYFSKREYPSGSSKVAPSASYERYAATTRLPNGEL----------------------------------PSSISPGADYMSCRSYLDQVPTDRYS-------------------------NRVTLQLGLSRAGNSNVQQLGITRAGNSNAYDYTEAAEQIHGREDYRRLSGLTGYPGGSSNCGFQIVNW-------------SLSLVLVISGARVKLHEAHPGSSES--------IVEIQGIPDQVKAAQSLLQGFIGASSNSRQAPQSSRMAHYF----------------- [952] 'gi|78708846|gb|ABB47821.1| RNA-binding protein, putative [Oryza sativa (japonica cultivar-group)]' M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DHDRSRRHKSNTSRKRP------------------------HFNSDDGKRKRLNSRHDDG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TISSEPIE---TIYRIL-----------CPVKKIGSVLGRGGDIVKALRDTTKAKIRVADSIP-GADERV--------IIIFNYSSQTEEAAQNISTD--------------------------------------------------------------------------------GFEDMKPHCFAQDALLK----------------------IHDK---IAADEDLHAGIV---------HEKSENVDDVIARILVPGNQVG--------CLLGKGGSIIQQLR------------------------------------------------------------------------NDTGAGIRVLPS---ENLPQCA--LKSDELV-----------------QISGS-SSLVRKALYEISTRLHQ----HPR--------KDNPPLEE----------------------------------------------------------------------------------------------------------------------------------------IIDASTQRKHQAPPQLPHANPMLPHL-----------------------------------------------HVDHSPQIPLLDPYRNRPLQYH-SAEAEEFSIKILCASEHIGQVIGKSGGNVRQVEQ---QTGACVQVKEVGKNA--SEERLIVVSSQE-------------------------IPDDPVSPTIEALI---LLHSKVS-TLAEN----------------------HHLTTRLVVPSN-KVGCIIGEGGKVITEMRRRTGAEIRVYS----KADKPKYLSFDEEL-----------------------------------------------VQVAGLPAIARGA----------LTEIASR-------------------------------------------LRTRTLRDGSSSNN-------------------PTPFAPFDGPPVDILPNREFMLYGRSANSPPYGGPPNDPPYGRPAIDPPYGRPAIDPPYGRPAIDPPYRRPANDTSYGGLNNDGPRDPYTAYPVEYFSKREYPSGNSKVTPSASYDRYAATTRLPNREL----------------------------------PSSISPGADYMSRRSYLDQVPTDRYS-------------------------SRGTLQLGLSRAGNSNVQQLGITRAGNSNAYDYTEVHFQCVSLPLLCKWPSPDMFPL---ET--------------------------------------------------------------------------------------------------------------- [677] 'gi|37535668|ref|NP 922136.1| putative RNA-binding protein [Oryza sativa (japonica cultivar-group)] >gi|22128716|gb|AAM92828.1|' M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DHDRSRRHKSNTSRKRP------------------------HFNSDDGKRKRLNSRHDDG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TISSEPIE---TIYRIL-----------CPVKKIGSVLGRGGDIVKALRDTTKAKIRVADSIP-GADERV--------IIIFNYSSQTEEAAQNISTD--------------------------------------------------------------------------------GFEDMKPHCFAQDALLK----------------------IHDK---IAADEDLHAGIV---------HEKSENVDDVIARILVPGNQVG--------CLLGKGGSIIQQLR------------------------------------------------------------------------NDTGAGIRVLPS---ENLPQCA--LKSDELV-----------------QISGS-SSLVRKALYEISTRLHQ----HPR--------KDNPPLEE----------------------------------------------------------------------------------------------------------------------------------------IIDASTQRKHQAPPQLPHANPMLPHL-----------------------------------------------HVDHSPQIPLLDPYRNRPLQYH-SAEAEEFSIKILCASEHIGQVIGKSGGNVRQVEQ---QTGACVQVKEVGKNA--SEERLIVVSSQE-------------------------IPDDPVSPTIEALI---LLHSKVS-TLAEN----------------------HHLTTRLVVPSN-KVGCIIGEGGKVITEMRRRTGAEIRVYS----KADKPKYLSFDEEL-----------------------------------------------VQVAGLPAIARGA----------LTEIASR-------------------------------------------LRTRTLRDGSSSNN-------------------PTPFAPFDGPPVDILPNREFMLYGRSANSPPYGGPPNDPPYGRPAIDPPYGRPAIDPPYGRPAIDPPYRRPANDTSYGGLNNDGPRDPYTAYPVEYFSKREYPSGNSKVTPSASYDRYAATTRLPNREL----------------------------------PSSISPGADYMSRRSYLDQVPTDRYS-------------------------SRGTLQLGLSRAGNSNVQQLGITRAGNSNAYDYTEAAEQIHGREDYRRLSGLTGYPG---GSVEFRIPNSYLESVIGAGGV-NLAEIRQISGARVKLHEAHPGSSES--------IVEIQGIPDQVKAAQSLLQGFIGASSNSRQAPQSSRMAHYF----------------- [762] 'gi|79317957|ref|NP 001031044.1| nucleic acid binding [Arabidopsis thaliana]' M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASTLRNIH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D---TVYRYL-----------CPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALP-GCEERV--------VTMYSTNEELNH----------------------------------------------------------------------------------------FGDDGELVCPALDALFK----------------------VHDM---VVADADQDDGTD--------DDNDLGEKQTVTVRMLVPSDQIG--------CVIGKGGQVIQNLR------------------------------------------------------------------------NDTNAQIRVIK----DHLPACALTLSHDELL-----------------LIIGE-PLVVREALYQVASLLHD----NPS--------RFQHLLLS-------------------------------------------------------------------------------------------------------------------------------------------------------SSSSSMHQPGAMLMSAALTSSHRNYA----------------VRRD-----------------------------------IADAREFCVCFICPAENVGGVIGKGGGFINQIRQ---ETGATIRV-NTSETD--DDDCIIFISSKE-------------------------FYEDQ-SPAVNAAI---RLQQRCS-EKVGKDAND------------------LAISTRLLVSSS-QIGCLIGKGGAVISEMRSVTRANIRILQ----KEDVPKIAREDEEM-----------------------------------------------VQITGSPDAAMKA----------LTQVILR-------------------------------------------LRANSFDMDHGLVL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPTSFPYIPQVTESSSKSKYAKRDDHSKLNSNSKRRNHVS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [446] 'gi|30683629|ref|NP 172869.2| nucleic acid binding [Arabidopsis thaliana] >gi|30102666|gb|AAP21251.1| At1g14170 [Arabidopsis tha' M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASTLRNIH-------------------------------------------------D-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QNVIASED---TVYRYL-----------CPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALP-GCEERV--------VTMYSTNEELNH----------------------------------------------------------------------------------------FGDDGELVCPALDALFK----------------------VHDM---VVADADQDDGTD--------DDNDLGEKQTVTVRMLVPSDQIG--------CVIGKGGQVIQNLR------------------------------------------------------------------------NDTNAQIRVIK----DHLPACALTLSHDELL-----------------LIIGE-PLVVREALYQVASLLHD----NPS--------RFQHLLLS-------------------------------------------------------------------------------------------------------------------------------------------------------SSSSSMHQPGAMLMSAALTSSHRNYA----------------VRRD-----------------------------------IADAREFCVCFICPAENVGGVIGKGGGFINQIRQ---ETGATIRV-NTSETD--DDDCIIFISSKE-------------------------FYEDQ-SPAVNAAI---RLQQRCS-EKVGKDAND------------------LAISTRLLVSSS-QIGCLIGKGGAVISEMRSVTRANIRILQ----KEDVPKIAREDEEM-----------------------------------------------VQITGSPDAAMKA----------LTQVILR-------------------------------------------LRANSFDMDHGLVL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPTSFPYIPQVTESSSKSKYAKRDDHSKLNSNSKRRNHVS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [454] 'gi|5080792|gb|AAD39302.1| Unknown protein [Arabidopsis thaliana]' M-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASTLRNIHGKRSNLQSE------------------------FTGNGGSKRRNLHDETD-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QNVIASED---TVYRYL-----------CPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALP-GCEERV--------VTMYSTNEELNH----------------------------------------------------------------------------------------FGDDGELVCPALDALFK----------------------VHDM---VVADADQDDGTD--------DDNDLGEKQTVTVRMLVPSDQIG--------CVIGKGGQVIQNLR------------------------------------------------------------------------NDTNAQIRVIK----DHLPACALTLSHDELL-----------------LIIGE-PLVVREALYQVASLLHD----NPS--------RFQHLLLS-------------------------------------------------------------------------------------------------------------------------------------------------------SSSSSMHQPGAMLMSAALTSSHRNYA----------------VRRD-----------------------------------IADAREFCVCFICPAENVGGVIGKGGGFINQIRQ---ETGATIRV-NTSETD--DDDCIIFISSKE-------------------------FYEDQ-SPAVNAAI---RLQQRCS-EKVGKDAND------------------LAISTRLLVSSS-QIGCLIGKGGAVISEMRSVTRANIRILQ----KEDVPKIAREDEEM-----------------------------------------------VQITGSPDAAMKA----------LTQVILR-------------------------------------------LRANSFDMDHGLVL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPTSFPYIPQVTESSSKSKYAKRDDHSKLNSNSKRRNHVS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [479] ; END; BEGIN CODONS; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE=unord PolyTcount=MINSTEPS ; EXSET * UNTITLED = 1-1483 1492 1499-1501 1513-1537 1543 1552-1554 1560-1589 1602 1631-1635 1649-1695 1698-2188; END; BEGIN MacClade; Version 4.0 87; LastModified -1051129534; FileSettings editor '0' '0' '1' '1'; Singles 100; Editor 00011001111111100100010010 '1' '8' Geneva '9' '646' '1' all; EditorPosition '46' '0' '979' '1613'; TreeWindowPosition '46' '6' '989' '1630'; ListWindow Characters closed Geneva '9' '50' '10' '273' '366' 000; ListWindow Taxa closed Geneva '9' '50' '10' '276' '490' 100000000; ListWindow Trees closed Geneva '9' '50' '10' '276' '490' ; ListWindow TypeSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow ExSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow CharSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow TaxSets closed Geneva '9' '50' '10' '276' 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