#NEXUS [MacClade 4.08 registered to Hirai, ERATO] BEGIN DATA; DIMENSIONS NTAX=66 NCHAR=637; FORMAT DATATYPE=PROTEIN SYMBOLS = " 1 2 3 4" MISSING=? GAP=- ; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] 'gi|21553465|gb|AAM62558.1| unknown [Arabidopsis thaliana]' MKKRQMVIKQRSRNSNTSSSWTTTSSSSSSSEISNVRYVECQKNHAANIGGYAVDGCREFMAAGVEGTVDALRCAACGCHRNFHRKEVDTEVVCEYSPPNA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [101] 'gi|18410665|ref|NP 565088.1| transcription factor [Arabidopsis thaliana] >gi|89111834|gb|ABD60689.1| At1g74660 [Arabidopsis tha' MKKRQMVIKQRSRNSNTSSSWTTTSSSSSSSEISNVRYVECQKNHAANIGGYAVDGCREFMAAGVEGTVDALRCAACGCHRNFHRKEVDTEVVCEYSPPNA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [101] 'gi|78098986|gb|ABB20816.1| mini zinc finger 3 [Arabidopsis thaliana]' MKKRQVVIKQRK------------SSYTMTSSSSNVRYVECQKNHAANIGGYAVDGCREFMASGGDD---ALTCAACGCHRNFHRREVDTEVVCEYSPPNA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [88] 'gi|50900288|ref|XP 450932.1| putative ZF-HD homeobox protein [Oryza sativa (japonica cultivar-group)] >gi|46806323|dbj|BAD17515' MDFDEEMPPMPVSSSYETPPQHGLGSRVKGPSCGGGRYRECLKNHAVGIGGHAVDGCGEFMAAGEEGTIDALRCAACNCHRNFHRKESESLAGEGSPFSPAAVV-------------------------------PYGATPHHQFSPYY-----------------------RTPAGYLHHHQHHM-AAAAAAAAAAAGGYPQRPLALPS-----------------------------------------------------------------------TSHSGRDDGDDLSGMVGPMSAVGPLSGMSLG-AGPSGS--------------GS--GKKRF----RTKFTQEQ---------------K--------------------DKMLAFAERVGWRIQKHD------EAAVQQF-CD--E----VGVKRH----------VLKVWMHNN---------------------------------KH------------TLGKKLP------------------------------------------------------------------------------------------------------------------------------- [260] 'gi|15233925|ref|NP 194197.1| transcription factor [Arabidopsis thaliana] >gi|21928089|gb|AAM78073.1| AT4g24660/F22K18 140 [Arab' MNFMEMSGVNPPCGYDSLSGEGATGVGRSKGVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETESIGGRA-----------------------------------------HRVPTYYNRPPQP-----------------------HQPPGYLHLTSPA------------------------------------------------------------------------------------------------APYRPPAASGDEEDTSNPS-------------SS------------------GG--TTKRF----RTKFTAEQ---------------K--------------------EKMLAFAERLGWRIQKHD------DVAVEQF-CA--E----TGVRRQ----------VLKIWMHNN---------------------------------KN------------SLGKKP-------------------------------------------------------------------------------------------------------------------------------- [209] lcl|Ppa_MIF1_2_1_unnamed_protein_product MDLRQAVQGAAAGNESASTKP-------SNVKKGTVRYRECQKNHAASIGGHALDGCGEFMPGGEEGTVDALRCAACDCHRNFHRREVEGEVLCECKRKQKPGVQLGAAVIT----------SQHP---------PGGTIPSTPMATLA-----------------------LPPS-AGVMTPLTMAA---------------------------------------------------------------------------------------------LSTGGPTDSDEQDDGLGN---------------SGGGMMMSMRSP-------SA--IKKRF----RTKFTNEQ---------------K--------------------DQMCAFAEKVGWRIQKHD------EASVQEF-CA--T----AGIKRH----------VLKVWMHNN---------------------------------KH------------TMGKKPT------------------------------------------------------------------------------------------------------------------------------- [236] 'gi|50946893|ref|XP 482974.1| putative ZF-HD homeobox protein [Oryza sativa (japonica cultivar-group)] >gi|42408573|dbj|BAD09750' MDFDEEMPPMPLSSGYDAPMQPGLGGGGGGGGGGGARYRECLKNHAVGIGGHAVDGCGEFMASGEEGSIDALRCAACGCHRNFHRKESESPTGVGSAVSPAAIS-------------------------------AYGASPHHQFSPYY-----------------------RTPAGYLHHQQHQMAAAAAAAAAAAAGGYPQRPLALPS-----------------------------------------------------------------------TSHSGRDEGDDMSGMVGPM-VIGPMVGMSLGSAGPSGS--------------GS--GKKRF----RTKFTQEQ---------------K--------------------DKMLAFAERLGWRIQKHD------EAAVQQF-CE--E----VCVKRH----------VLKVWMHNN---------------------------------KH------------TLGKKAP------------------------------------------------------------------------------------------------------------------------------- [261] 'gi|13374061|emb|CAC34447.1| ZF-HD homeobox protein [Flaveria bidentis]' MEFEEEVGIQLTPGSFDAVGNSGRRKSGGGGGGGGYRYKECLKNHAVGIGGQAVDGCGEFMAAGDEGTLDALKCAACNCHRNFHRKEVEGQQRQHQHQQQAAL--------------------------------QHQYITATPYYHHH-----------------------HRPTGYLHMKPPPSSLHQR------------------------------------------------------------------------------------------QLALPSTSRDDLDEISNPS-------------SSGGGGVGG-----------SG--SKKRF----RTKFTQDQ---------------K--------------------DRMLAFSEALGWRIQKHD------EAAVQQF-CN--E----TGVKRH----------VLKVWMHNN---------------------------------KH------------TIGKKP-------------------------------------------------------------------------------------------------------------------------------- [231] 'gi|15238445|ref|NP 201344.1| transcription factor [Arabidopsis thaliana] >gi|30023758|gb|AAP13412.1| At5g65410 [Arabidopsis tha' MEFPPLSRVLPKASTESHETTGTTFMVVHGGGGSRFRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPYFHHAPPQHQPPPPPPGFYRL------------PAPV---------SYRPPPSQAPPLQL-----------------------ALPPPQ------------------------------------------------------------------------------------------------------------RERSEDPMETSSAE-------------AG------------------GG--IRKRH----RTKFTAEQ---------------K--------------------ERMLALAERIGWRIQRQD------DEVIQRF-CQ--E----TGVPRQ----------VLKVWLHNN---------------------------------KH------------TLGKSPSPLHHHQAPPPPPPQSSFHHEQDQP------------------------------------------------------------------------------------------------------- [242] 'gi|77548490|gb|ABA91287.1| ZF-HD protein dimerisation region, putative [Oryza sativa (japonica cultivar-group)]' MGPRSAAKPYANGSTAAA------AAAGRKENNKVVRYRECQRNHAASIGGHAVDGCREFMASGAEGTAAALLCAACGCHRSFHRREVEAAAAECDCSSDTS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SG--TGRR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [102] lcl|Smo_MIF1_6_1_unnamed_protein_product MDLAAVVVVSGEAG-AAAAAGG------DSKSKRPVRYTQCLKNHAAGIGGHALDGCGEFMPCGEEGTLDALKCAACDCHRNFHRREVEGEPSCL-------------------------------------------ECHHRKDKKRL-----------------------MLP----------------------------------------------------------------------------------------------------------------SRSGELDDQGVYM-------------PNAGG---------------PN--LKKRF----RTKFTGDQ---------------K--------------------ERMLAFADKVGWKIQKHD------EAEVQQF-CN--E----VGVKRH----------VLKVWMHNN---------------------------------KH------------TLGKKM-------------------------------------------------------------------------------------------------------------------------------- [187] lcl|Smo_MIF1_10_1_unnamed_protein_product MDLAAVVVVSGEAGAAAAAAGG------DSKSKRPVRYTQCLKNHAAGIGGHALDGCGEFMPCGEEGTLDALKCAACDCHRNFHRREVEGEPSCL-------------------------------------------ECHHRKDKKRL-----------------------MLP----------------------------------------------------------------------------------------------------------------SRSGELDDQGVYM-------------PNAGG---------------PN--LKKRF----RTKFTGDQ---------------K--------------------ERMLAFADKVGWKIQKHD------EAEVQQF-CN--E----VGVKRH----------VLKVWMHNN---------------------------------KH------------TLGKKM-------------------------------------------------------------------------------------------------------------------------------- [188] 'gi|42572555|ref|NP 974373.1| unknown protein [Arabidopsis thaliana] >gi|88900352|gb|ABD57488.1| At3g28917 [Arabidopsis thaliana' MRKRQVVLRRASPEEPSRS-----SSTASSLTVRTVRYGECQKNHAAAVGGYAVDGCREFMASGEEGTVAALTCAACGCHRSFHRREIETEVVCDCNSPPSTGN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [99] lcl|Ppa_MIF1_1_1_unnamed_protein_product MDLRQAVVTAVTESNAASAKA-------AHAKKGAVRYRECQKNHAAGIGAHAIDGCGEFMPGGEEGSVDALRCAACNCHRNFHRREVEGEVLCDCKRKPKPGVQLGAGIVT----------PGMP---------TTLT-SATPVSTLA-----------------------LTVGGAGQMSPLAMAA---------------------------------------------------------------------------------------------LSAGGPTDSDEQDDGPGNV-------------TSGGGMMMSMRSP-------SA--IKKRF---------------------------?--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [178] lcl|Ppa_MIF1_3_1_unnamed_protein_product MDLRQAVVTAVTESNAASTKAA------NAAKKGAVRYRECQKNHAAGMGGHAMDGCGEFMPGGGEGSVDALRCAACNCHRNFHRREVEGEVLCDCKRKPKMGAPLGTGIVN----------TGQP---------PTLT-STTPVTTLA-----------------------LTASVAGQMTPLAMAA---------------------------------------------------------------------------------------------LSAGGPTDSDEQDDGPGNV-------------TSGGGMMMSMRSP-------SA--IKKRF----RTKFTTEQ---------------K--------------------DKMCAFAEKLGWRIQKHD------EAAVQEF-CT--T----VGVKRH----------VLK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [224] 'gi|77553500|gb|ABA96296.1| hypothetical protein LOC Os12g03110 [Oryza sativa (japonica cultivar-group)]' MGPRSAAKPYANGSTAAA------AAAGRKENNKVVRYRECQRNHAASIGGHAVDGCREFMASGADGTAAALLCAACGCHQSFHRREVEAAAAECDCSSDTS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SG--TGRRFLQQL----------------------------------------------------VLSW-------------------------------------------------WLSSA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [116] 'gi|77553350|gb|ABA96146.1| ZF-HD protein dimerisation region, putative [Oryza sativa (japonica cultivar-group)]' MDLRHMSPPTPPAAAEESKA----VVVVSSSATAAARYRECLKNHAAAIGGSATDGCGEFMPGGEEGSLDALRCSACGCHRNFHRKELDAAAAPPLHHHHHQLLGVGAHPRGH---------GHHH---------HHLLVAALPPPTRM-----------------------VMP----------------------------------------------------------------------------------------------------------LSAMHTSESDDAAARPGGG---------------------------------AA--ARKRF----RTKFTAEQ---------------K--------------------ARMLGFAEEVGWRLQKLE------DAVVQRF-CQ--E----VGVKRR----------VLKVWMHNN---------------------------------KH------------TLARRHLHPSPAAAAGDDDDDGAPPPHPDPRRRELAAAAAPPPAPVTQHIKKSVDNKSLISSLAALHCIALLLFHQIDA------------------------------------------------------- [289] 'gi|70727923|gb|AAZ07989.1| zinc finger homeodomain protein 1 [Physcomitrella patens]' MDLRQAVQVAGAASESASAKL-------SNVKKGAFRYRECQKNHAASIGGHALDGCGEFMPGGQEGTVGALRCAACDCHRNFHRREVEGEVLCECKRKPKPGMQLGAGIVT----------PHQL---------PGGTNTSTPMGALA-----------------------LPPS-AGAMTPLTTAA---------------------------------------------------------------------------------------------LSAGGLTDSDEQDDGLGN---------------SAGGMMISMRSP-------SA--IKKRF----RTKFSTEQ---------------K--------------------DQMCAFAEELGWRIQKHD------EAAVQEF-CT--T----VGVKRH----------VLKVWMHNN---------------------------------KH------------TVGKKP-------------------------------------------------------------------------------------------------------------------------------- [235] lcl|Ppa_MIF1_4_1_unnamed_protein_product MDLRQAVQVAGAASESASAKL-------SNVKKGAFRYRECQKNHAASIGGHALDGCGEFMPGGQEGTVGALRCAACDCHRNFHRREVEGEVLCECKRKPKPGMQLGAGIVT----------PHQL---------PGGTNTSTPMGALA-----------------------LPPS-AGAMTPLTTAA---------------------------------------------------------------------------------------------LSAGGLTDSDEQDDGLGN---------------SAGGMMISMRSP-------SA--IKKRF----RTKFSTEQ---------------K--------------------DQMCAFAEELGWRIQKHD------EAAVQEF-CT--T----VGVKRH----------VLKVWMHNN---------------------------------KH------------TVGKKP-------------------------------------------------------------------------------------------------------------------------------- [235] 'gi|18410804|ref|NP 565106.1| transcription factor [Arabidopsis thaliana] >gi|21536702|gb|AAM61034.1| unknown [Arabidopsis thali' MDMISNIISTNIDDNCNGNNNNTRSFSISAAAKPTVRYRECLKNHAASVGGSVHDGCGEFMPSGEEGTIEALRCAACDCHRNFHRKEMDGVGSSDLISHHRHHHYHHNQ--------------------------YGGGGGRRPPPPNMMLNPLMLPPPPNYQPIHHHKYGMSPPGGGGMVTPMSVAYGG-------------------------------------------------------------------------------------------GGGGAESSSEDLNLYGQSS-------------GEGAGAAAGQMAFSM-----SS--SKKRF----RTKFTTDQ---------------K--------------------ERMMDFAEKLGWRMNKQD------EEELKRF-CG--E----IGVKRQ----------VFKVWMHNN---------------------------------KN------------NAKKPPTPTTTL-------------------------------------------------------------------------------------------------------------------------- [271] lcl|Smo_MIF1_2_1_unnamed_protein_product HSSQQQLQPTGTPNTATTT-----NGSKVEPSKKPVRYRECLKNHAAGIGGHALDGCGEFMPSGEEGTIESLKCSACDCHRNFHRREVEGAKDVMSKKKPSSV--------------------------------LPLQQHGSPLGSMA-----------------------RSPGAL-------------------------------------------------------------------------------------------------------VALSNSDQSDDHDLGAQHQ-------------TTYSLAHHLIP---------SA--IKKRF----RTKFTNEQ---------------K--------------------EKMFHFAHRLGWKIQKHD------EGEVQQF-CA--D----VGVKRH----------VLKVWMHNN---------------------------------KN------------TFGKKMS------------------------------------------------------------------------------------------------------------------------------- [216] lcl|Ppa_MIF1_6_1_unnamed_protein_product MESYTPMPITATFAGLHEFSKLKLEAAGAKAKSKAIRYRECNRNHAISTGGYAVDGCGEFMPGGEEGTVAALKCAACDCHRNFHRKEVEGEATCDCQNIKRNDPRK----------------RGLM---------APGGPSQPGSSQQL-----------------------ALPTPAQIISRVTAAPF--------------------------------------------------------------------------------------------LLGPGPTDSDDGDGGLSGS-------------P-------------------ST--IKKRF----RTRFNNEQ---------------K--------------------EKMGVFAEKLGWKIQKHD------EAAVQEF-CA--E----VGVKRH----------VLKVWMHNN---------------------------------KH------------TIGKKPP------------------------------------------------------------------------------------------------------------------------------- [229] 'gi|62733875|gb|AAX95984.1| ZF-HD protein dimerisation region, putative [Oryza sativa (japonica cultivar-group)] >gi|77549547|gb' MVSEHVGNNGQAMAMASPPPTNVAMAVVGGGGGVAVKYRECLKNHAAAIGGNATDGCGEFMPSGEEGSLEALKCSACGCHRNFHRKEADDLDADSCAAALRAAAGRHHHLLGPALPHHHHKNGGGLLVAGGDPYGAAYAAARALPPPPP-----------------------PPPHGHHHHHQIIMP----------------------------------------------------------------------------------------------LNMIHTSESDEMDVSGGGG-------------GVGRGGGSS-----------SS--SKKRF----RTKFTAEQ---------------K--------------------ARMLEFAERVGWRLQKLD------DAMVHHF-CQ--E----IGVKRR----------VLKH--------------------------------------AVGDVTVAVMSDHLTSKIKGVKTEEIKKGV---------------------------------------------------------------------------------------------------------------------- [276] lcl|Smo_MIF1_9_1_unnamed_protein_product QQ-TGLVGRLASTPTNGMPGGEGDSGGAGGAKSKTVHYRECLKNHAASIGGHALDGCGEFMPCGEEGTMEALKCAACDCHRNFHKREVEGEPLVCDICHMNRRERNRKAAAIAAGVL-----QQQQ---------QQQGGGHTPSALQT-----------------------TCNTAAATASALPLAASS-------------------------------------------------------------------------------------------AASLGPRTGNAPMSLLALS-------------SRGEGDHHDMSP--------LS--MKKRF----RTKFSMDQ---------------K--------------------EKMYMFAEKVGWRIQKHD------EAAVQHF-CA--E----VGVKRP----------VLK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [236] lcl|Ppa_MIF1_5_1_unnamed_protein_product MESYTPMPITATFAGLHEFSKLKLEAPSVKAKAKVIRYRECNRNHAITTGGYVVDGCGEFMPGGEEGTVAALRCAACDCHRNFHRKETEGETSCDCKYINRNDPRK----------------RGMM---------VPGAPSQPGGPQQL-----------------------ALLSPAPIMGRVTPAPY--------------------------------------------------------------------------------------------MLAHGLVDSDDGDGGLSGS-------------P-------------------ST--MKKRF----RTKFTNEQ---------------K--------------------EKMGVFAEKLGWKIQKHD------EAAVQEF-CA--E----VGVKRH----------VLKVWMHNN---------------------------------KN------------TIGKKPA------------------------------------------------------------------------------------------------------------------------------- [229] 'gi|18398714|ref|NP 565436.1| transcription factor [Arabidopsis thaliana] >gi|4309732|gb|AAD15502.1| expressed protein [Arabidop' MEVYSQTANKEKPTTKRNGSDPDPYARPQTTSPGKARYRECQKNHAASSGGHVVDGCGEFMSSGEEGTVESLLCAACDCHRSFHRKEIDGLFVVNFNSFGHSQR----------------------------------------------------------------------PLGSRHVSPIMMSFGGG------------------------------------------------------------------------------------------GGCAAESSTEDLNKFHQSF-------------SGYGVDQFHH----------YQ--PKKRF----RTKFNEEQ---------------K--------------------EKMMEFAEKIGWRMTKLE------DDEVNRF-CR--E----IKVKRQ----------VFKVWMHNN---------------------------------KQ------------AAKKKDL------------------------------------------------------------------------------------------------------------------------------- [218] lcl|Smo_MIF1_1_1_unnamed_protein_product NQADKLVGRLASTPTNGMPGGEGDSGGAGGAKSKTVHYRECLKNHAASIGGHSLDGCGEFMPCGEEGTMEALKCAACDCHRNFHKREVEGEPLVCDICHMNRRERNRKAAAIAAGVLQQQQQQQQQ---------QQQGGGHTPSALQT-----------------------TCNTAAATASALPLAASS-------------------------------------------------------------------------------------------AASLGPRTGNAPMSLLALS-------------SRGEGDHHDMSP--------LS--MKKRF----RTKFSMDQ---------------K--------------------EKMYMFAEKVGWRIQKHD------EAAVQHF-CA--E----VGVKRH----------VLKVWMHNN---------------------------------KH------------TFGKRSSLGSPSSSSIGGANVPPGP?------------------------------------------------------------------------------------------------------------ [276] 'gi|15230335|ref|NP 190658.1| DNA binding / transcription factor [Arabidopsis thaliana] >gi|4835240|emb|CAB42918.1| putative pro' MELAITTTTMISTEVKPHTDPEPENQKPKTRVDQGAKYRECQKNHAASTGGHVVDGCCEFMAGGEEGTLGALKCAACNCHRSFHRKEVYGHRNSKQDHQLMIT--------------------------------PAFYSSNSSYKPRV-----------------------MHPTGE-------------------------------------------------------------------------------------------------------IGRRTSSSSEDMKKILSHR-------------NQNVDGKSLMMMM-------MR--KKKRV----RTKINEEQ---------------K--------------------EKMKEFAERLGWRMQKKD------EEEIDKF-CR--M----VNLRRQ----------VFKVWMHNN---------------------------------KQ------------AMKRNNSNISE--------------------------------------------------------------------------------------------------------------------------- [227] 'gi|21554149|gb|AAM63229.1| unknown [Arabidopsis thaliana]' MELAITTTTIISTEVKPHTDPEPENQKPKTRVDQGAKYRECQKNHAASTGGHVVDGCCEFMAGGEEGTLGALKCAACNCHRSFHRKEVYGHMNS??DYQLMIT--------------------------------PAFYSSNSSYKPRV-----------------------MHPTGE-------------------------------------------------------------------------------------------------------IGRRTSSSSEDMKKILSHR-------------NQNVDGKSLMMMM-------MR--KKKRV----RTKINEEQ---------------K--------------------EKMKEFAERLGWRMQKKD------EEEIDKF-CR--M----VNLRRQ----------VFKVWMHNN---------------------------------KQ------------AMKRNNSNISE--------------------------------------------------------------------------------------------------------------------------- [227] lcl|Ppa_MIF1_9_1_unnamed_protein_product MSI------AATFAGLHDSSKLKFEAENVSAKDKAISYKECNRNHAIFSGGYAVDGCGEFMPSGEEGTIESLKCAACDCHRNYHRKEVEVEESCDWQIFRCDDRKR----------------GQMT---------APGFPSQTATPHPL-----------------------ALPSPSQMISPVNQFQHY-------------------------------------------------------------------------------------------LLGPRPANSGDGDGGFGRS-------------P-------------------ST--MKKRF----RTKFTSNQ---------------R--------------------EKMGAFSEKLGWRIQKHD------EPAVQEF-CS--D----VGVKRH----------VLKVWMHNN---------------------------------KN------------TLGKKVDQVE---------------------------------------------------------------------------------------------------------------------------- [227] 'gi|42571471|ref|NP 973826.1| transcription factor [Arabidopsis thaliana] >gi|15223757|ref|NP 172896.1| transcription factor [Ar' MEINNNNTTQPPPMPLHGNGHGNNVGYNAIIKKPMIKYKECLKNHAAAMGGNATDGCGEFMPSGEDGSIEALTCSACNCHRNFHRKEVEGELAATAMSPYHQHPPH----------------RKLM---------LNHQKIRSAMPHQM-----------------------IMPIGVSNY----------------------------------------------------------------------------------------------------RYMHNNSESEDFMEEDGVT-------------TASRSLPNLP----------YN--QKKRF----RTKFTPEQ---------------K--------------------EKMLSFAEKVGWKIQRQE------DCVVQRF-CE--E----IGVKRR----------VLKVWMHNN---------------------------------KI------------HFSKKNNINLEDNDNEKINNLNNVDLSGNNDMTKIVP------------------------------------------------------------------------------------------------- [260] 'gi|15226993|ref|NP 178358.1| transcription factor [Arabidopsis thaliana] >gi|55740541|gb|AAV63863.1| hypothetical protein At2g0' MEI-NITTSNPLLVSSNSNGLGKNVTNIKKEKPVVIKYKECLKNHAATMGGNAIDGCGEFMPSGEEGSIEALTCSVCNCHRNFHRRETEGEEKTFFSPYLNHHQPPPQQ-------------RKLM---------FHHKMIKSPLPQQM-----------------------IMPIGV-------------------------------------------------------------------------------------------------------TTAGSNSESEDLMEEEGGG-------------SLTFRQPPPPPSPYSYG---HN--QKKRF----RTKFTQEQ---------------K--------------------EKMISFAERVGWKIQRQE------ESVVQQL-CQ--E----IGIRRR----------VLKVWMHNN---------------------------------KQ------------NLSKKSNNVSNNVDLSAGNNDITENLASTNP------------------------------------------------------------------------------------------------------- [260] 'gi|20148768|gb|AAM10791.1| hypothetical protein At2g02540/T822.16 [Arabidopsis thaliana]' MEI-NITTSNPLLVSSNSNGLGKNVTNIKKEKPVVIKYKECLKNHAATMGGNAIDGCGEFMPSGEEGSIEALTCSVCNCHRNFHRRETEGEEKTFFSPYLNHHQPPPQQ-------------RKLM---------FHHKMIKSPLPQQM-----------------------IMPIGV-------------------------------------------------------------------------------------------------------TTAGSNSESEDLMEEEGGG-------------SLTFRQPPPPPSPYSYG---HN--QKKRF----RTKFTQEQ---------------K--------------------EKMISFAERVGWKIQRQE------ESVVQQL-CQ--E----IGIRRR----------VLKVWMHNN---------------------------------KQ------------NLSKKSNNVSNNVDLSAGNNDITENLA?TNP------------------------------------------------------------------------------------------------------- [260] 'gi|15222382|ref|NP 177118.1| transcription factor [Arabidopsis thaliana] >gi|6692255|gb|AAF24606.1| hypothetical protein; 18366' MDL---------------------AGELTVTGEMGVCYKECLKNHAANLGGHALDGCGEFMPSPTATSTDSLRCAACGCHRNFHRRDPSENLNFLTAPPI-----------------------------------SSPSGTESPPSRHV-----------------------SSPV-------------------------------------------------------------------------------------PCSYYTSAPPHHVILSLS--SGFPGPSDQDPTVVRSENS-------------SR------------------GA--MRKRT----RTKFTPEQ---------------K--------------------IKMRAFAEKAGWKINGCD------EKSVREF-CN--E----VGIERG----------VLKVWMHNN---------------------------------KY------------SLLNGKIREIEHGLCLNTHSNDGDGSSSS--------------------------------------------------------------------------------------------------------- [226] 'gi|5091602|gb|AAD39591.1| 10A19I.6 [Oryza sativa (japonica cultivar-group)]' MPALPRTPPSSSSSPAAS------ASAGNGAGAAEVRYHECLRNHAAAMGGHVVDGCREFMPMPGDA-ADALKCAACGCHRSFHRKDDGQQQQQLRLLIPSPPTPRVP--------------LLMP---------PPQPQPHPHPQHPY-----------------------LHPPFPYHHTP--------------------------------------------------------------------------------------------------SGSGGTTTESSSEERGPPS-------------SSAAAA--------------QG--RRKRF----RTKFTPEQ---------------K--------------------EQMLAFAERVGWRMQKQD------EALVEQF-CA--Q----VGVRRQ----------VFKVWMHNN---------------------------------KS------------SIGSSSGGGSRRQPQEQQSQQQQQQQ------------------------------------------------------------------------------------------------------------ [242] 'gi|51854314|gb|AAU10695.1| unknown protein [Oryza sativa (japonica cultivar-group)]' MEFYGRTPPSSSSSPAAS------ASAGNGAGAAEVRYHECLRNHAAAMGGHVVDGCREFMPMPGDA-ADALKCAACGCHRSFHRKDDGQQQQQLRLLIPSPPTPRVP--------------LLMP---------PPQPQPHPHPQHPY-----------------------LHPPFPYHHTP--------------------------------------------------------------------------------------------------SGSGGTTTESSSEERGPPS-------------SSAAAA--------------QG--RRKRF----RTKFTPEQ---------------K--------------------EQMLAFAERVGWRMQKQD------EALVEQF-CA--Q----VGVRRQ----------VFKVWMHNN---------------------------------KS------------SIGSSSGGGSRRQPQEQQSQQQQQQQ------------------------------------------------------------------------------------------------------------ [242] 'gi|15228530|ref|NP 189534.1| transcription factor [Arabidopsis thaliana] >gi|22136284|gb|AAM91220.1| unknown protein [Arabidops' MDMTRIQPAK--PISFSNGIIK--RHHHHHHNNNKVTYKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDSLKCAACGCHRNFHRRETDDSSAVPPPSLLPSSTTTA---------------AIEY---------QPHHRHHPPPPLAP-----------------------PLPR-----------------------------------------------------------------------------SPNSSSPPPI------SSSYMLLALSG----NNKTAPFSDLNFAAAA-------------NHLSAT--------------PG--SRKRF----RTKFSSNQ---------------K--------------------EKMHEFADRIGWKIQKRD------EDEVRDF-CR--E----IGVDKG----------VLKVWMHNN---------------------------------KN------------SFKFSGGGATTVQRNDNGIGGE--------NSNDDGVRGLANDGD-------------GGGGRFESDSGGADGGGNVNASSSSS-------------------------------------------------- [292] 'gi|13277220|emb|CAC34409.1| ZF-HD homeobox protein [Flaveria bidentis]' MDIARIQPNQHLPPPFTNGVLKRLHQQQQQQQPVVVSYRECLKNHAAAMGGHAVDGCGEFMPSPSSSPTDSLKCAACGCHRNFHRRDPDGPFPAN--PPVQH--------------------VIEY---------KPHHRHHPPPPPPL-----------------------PIPL----AGVRENS----------------------------------------------------------------VSPADSPSPPPISSSYYPSAPHMLLALSS-GLPAPPSENAQFSPIPISG-------------GVIGSN--------------SA--GKKRF----RTKFTQDQ---------------K--------------------EKMHELAERVGWKMQKKD------EDLIIGF-CN--E----IGVDKG----------VFKVWMHNN---------------------------------KM------------TFGGKKDSDNHLAGNGSSGGGL-----DFFNRNNHQQQQQQQPQNNDSVTSG-----GGGNAIGTNGSSSSS-------------------------------------------------------------- [306] 'gi|48057668|gb|AAT39967.1| putative ZF-HD homeobox protein [Solanum demissum]' MELPLI-----KPLSFSNGNNRH-NHHHQPPPCTAVIYKECLKNHAASLGGHAVDGCGEFMLSPESTPSDSLKCAACGCHRNFHRREPSDDSSPPAHFIDFRHHMFPQ---------------------------IKRFSPSPSPSPSL-----------------------SPPPLPSLFQPQPVTPTGLKSEN------------------------------------------------------------------------------------------------------------------------------------------PN--GRKRF----RTKFTAEQ---------------K--------------------EKMHSFSEKLGWKLQKCD------ETAVDEF-CN--E----IGVGKS----------VLRVWMHNN---------------------------------KN------------TIGKKDYQISNNSSRDHSFENKNGFNINGTASSNEEEDHHKSNNNDNSTTSNCELHLHISTNGSSSSS------------------------------------------------------------------ [268] 'gi|53689757|gb|AAU89768.1| ZF-HD homeobox protein-like [Solanum tuberosum]' MELPLI-----KPLSFSNGNN-----HHQPPPCTVVIYKECLKNHAASLGGHAVDGCGEFMPSTESTPSDSLKCAACGCHRNFHRREPSDNSSPPAHFIDFRRHIFPQ---------------------------IKRF--SPSPSPSL-----------------------SPPPLPSLFQPQPVTPTGLKSEN------------------------------------------------------------------------------------------------------------------------------------------PN--GRKRF----RTKFTAEQ---------------K--------------------EKMHSFSEKLGWKLQKCD------ETAVDEF-CN--E----IGVGKN----------VLRVWMHNN---------------------------------KN------------TIGKKDYQISNNSSRDHSFENKNGFNINGTASSNEEEDHHKNNNNDNSTTSN-----SITMNNKDILEGNLYFVVKFE-------------------------------------------------------- [267] 'gi|50946127|ref|XP 482591.1| putative ZF-HD homeobox protein [Oryza sativa (japonica cultivar-group)] >gi|42408897|dbj|BAD10155' MEA--VVGVKYRPVVFPNGGAAAAKSKATPASATAAVYRECLKNHAASLGGHAVDGCGEFMPSPAADAADSLKCAACGCHRNFHRRLPEAPPSPPLLALPPPP--------------------------------PPPPPPPPPPQPQQ-----------------------HLPRTAAVAVAPQLLLHGSH-----------------QRREQSPETDRVRGPGHHHDDDAAADDDDSEDSEMSDYDDDRSASPLQAPPPVLSPGYLPSATHMLLSLGS-ASAPAVAASRPHAAAAAMG-------------PPPPPGAAT-----------SA--SRKRF----RTKFSPEQ---------------K--------------------QRMQALSERLGWRLQKRD------EAVVDEC-CR--E----IGVGKG----------VFKVWMHNN---------------------------------KH------------NFLGGHSARRSAAAAAAAPLAPPPVLTDFSINGSSTHAAAADHAAATASGGGGGSPQST--------------------------------------------------------------------------- [354] 'gi|50251525|dbj|BAD28899.1| putative ZF-HD homeobox protein [Oryza sativa (japonica cultivar-group)]' MEA---MDVKYKPLVFPNGAIKKAAPAVGGGGGGETVYRECLKNHAASLGGHALDGCGEFMPSPAANPADSLRCAACGCHRNFHRRMLLSLGSSGQAQR---------------------------------------------LPPQV-----------------------MSPAAA-------------------------------------------------------------------------------------------------------------------------A-------------APPPGGGGG-----------GM--PRKRF----RTKFTAEQ---------------K--------------------QRMQELSERLGWRLQKRD------EAIVDEW-CR--D----IGVGKG----------VFKVWMHNN---------------------------------KH------------NYLGGHSARRSASSSSAAAAAAPPFNPPTSPPPPPPPPPHATDFNINGTATAATAAAAATIAAGNHQENGASSPQSA--------------------------------------------------------- [255] 'gi|15242243|ref|NP 197025.1| transcription factor [Arabidopsis thaliana] >gi|45773756|gb|AAS76682.1| At5g15210 [Arabidopsis tha' MDVIRIQPAK--PISFSNGKRCH-HHHLASEAVAVATYKECLKNHAAGIGGHALDGCGEFMPSPSFNSNDSLTCAACGCHRNFHRREEDPSSLSAIVP------------------------AIEF---------RPHNRHQLPPPPPP------------------HLAGIRSPD-----------------------------------------------------------------------------DDDSASPPPI------SSSYMLLALSGGRGGANTAV--------------------------------------------PM--SRKRF----RTKFSQYQ---------------K--------------------EKMFEFSERVGWRMPKAD------DVVVKEF-CR--E----IGVDKS----------VFKVWMHNN---------------------------------KI------------SGRSGARRANGGVVVGGVGDSRQSVVPTNGSFSST--------------------------------------------------------------------------------------------------- [248] lcl|Smo_MIF1_3_1_unnamed_protein_product MDLQQQQQNLAKLSSAAVAAAAAAALLKPDGTKKAVRYRECLKNHAAGIGGHALDGCGEFMPNKEDES--SMRCGACDCHRNFHRREVEGEKPIC-------------------------------------------DLCKEDDGTAG-----------------------GTPGGT-------------------------------------------------------------------------------------------------------ARHGGGKRLADFGGGGGGG-------------GGGGG---------------QP--LKKRF----RTKFTNEQ---------------K--------------------ERMFVLSEKLGWRIQKHD------EAEVAQF-CA--D----TGVKRH----------VLKVWMHNN---------------------------------KH------------TFGNKRLSPTDAPHDPT--------------------------------------------------------------------------------------------------------------------- [212] lcl|Smo_MIF1_5_1_unnamed_protein_product MDLQQQQQNLAKLSSAAVAAAAAAALLKPDGTKKAVRYRECLKNHAAGIGGHALDGCGEFMPNKEDES--SMRCGACDCHRNFHRREVEGEKPIC-------------------------------------------DLCKEDDGTAG-----------------------GTPGGT-------------------------------------------------------------------------------------------------------ARHGGGKRLADF-GGGGGG-------------GGGGG---------------QP--LKKRF----RTKFTNEQ---------------K--------------------ERMFVLSEKLGWRIQKHD------EAEVAQF-CA--D----TGVKRH----------VLKVWMHNN---------------------------------KH------------TFGNKRLSPTDAPHDPT--------------------------------------------------------------------------------------------------------------------- [211] 'gi|18421904|ref|NP 568570.1| transcription factor [Arabidopsis thaliana] >gi|21436443|gb|AAM51422.1| unknown protein [Arabidops' MDMTRIQPAK--PISFSNGIIK--RHHHHHHPL-LFTYKECLKNHAAALGGHALDGCGEFMPSPSSISSDSLKCAACGCHRNFHRRDPDNNNDSSQIPPPPST-------------------AVEY---------QPHHRHHPPPPPPP-----------------------PPPR-----------------------------------------------------------------------------SPNSASPPPI------SSSYMLLSLSGTNNNNNNLASFSDLNFSAGN-------------NHHHHHQHTL----------HG--SRKRF----RTKFSQFQ---------------K--------------------EKMHEFAERVGWKMQKRD------EDDVRDF-CR--Q----IGVDKS----------VLKVWMHNN---------------------------------KN------------TFNRRDIAGNEIRQIDNGGGNHTPILAGEINNHNNGHHGVGGGGELHQSVSS-----GGGGGGFDSDSGGANGGNVNGSSSS---------------------------------------------------- [309] 'gi|21592512|gb|AAM64462.1| unknown [Arabidopsis thaliana]' MDMTRIQPAK--PISFSNGIIK--RHHHHHHPL-LFTYKECLKNHAAALGGHALDGCGEFMPSPSSISSDSLKCAACGCHRNFHRRDPDNNNDSSQIPPPPST-------------------?VEN---------QPHHRHHPPPPPPP-----------------------PPPR-----------------------------------------------------------------------------SPNSASPPPI------SSSYMLLSLSGTNNNNNNLASFSDLNFSAGN-------------NHHHHHQHTL----------HG--SRKRF----RTKFSQFQ---------------K--------------------EKMHEFAERVGWKMQKRD------ZDDVRDF-CR--Q----IGVDKS----------VLKVWMHNN---------------------------------KN------------TFNRRDIAGNEIRQIDNGGGNHTPILAGEINNHNNGHHGVGGGGELHQSVSS-----GGGGGGFDSDSGGANGGNVNGSSSS---------------------------------------------------- [309] 'gi|50911951|ref|XP 467383.1| putative ZF-HD homeobox protein [Oryza sativa (japonica cultivar-group)] >gi|19387257|gb|AAL87169.' MEYHHLQRHHEPARNGVLGGVAGAGGEGAAGEAPTWRYRECLKNHAARMGAHVLDGCGEFMSSPGDGAA-ALACAACGCHRSFHRREPAVVAPASLSLCPASASAS----------------AAAGLVSLSPSATPTGANSSRLMPLLL-----------------------APPHMQKRPPVLPVSPASA------------------------------------------------------------------------------------------PAALAESSSEELRPPPLPS-------------SHPHAHAAAVVAASASAPP-GP--SKKRF----RTKFTAEQ---------------K--------------------ERMREFAHRVGWRIHKPD------AAAVDAF-CA--Q----VGVSRR----------VLKVWMHNN---------------------------------KH------------LAKTPPSPTSQPPPPPLHHDPSPPPPPHHHHHHHHHHHPPQHHQQQQQQHDA---------------------------------------------------------------------------------- [302] 'gi|15239059|ref|NP 199092.1| transcription factor [Arabidopsis thaliana] >gi|28393931|gb|AAO42373.1| unknown protein [Arabidops' MDEPKPTRTHHAPPPILDSIFKVT----------KPHYYECRKNHAADIGTTAYDGCGEFVSS----TGESLNCAACGCHRNFHREELIPENGGVTETVL-----------------------------------EVLKISSCQFRRIF-----------------------CSPYGG-------------------------------------------------------------------------------------------------------GKSEGKKKKKEKESYGGDP-------------IIKDRFGGAEEE--------EG--IVKRL----KTKFTAEQ---------------T--------------------EKMRDYAEKLRWKVRPER------QEEVEEF-CV--E----IGVNRK----------NFRIWMNNH---------------------------------KD------------KIIIDE-------------------------------------------------------------------------------------------------------------------------------- [204] 'gi|21536616|gb|AAM60948.1| unknown [Arabidopsis thaliana]' MDEPKPTRTHHAPPPILDSIFKVT----------KPHYYECRKNHAADIGTTAYDGCGEFVSS----TGESLNCAACGCHRNFHREELIPENGGVTETIL-----------------------------------EVLKISSCQFRRIF-----------------------CSPYGG-------------------------------------------------------------------------------------------------------GKSEGKKKKKEKESYGGDP-------------IIKDRFGGAEEE--------EG--IVKRL----KTKFTAEQ---------------T--------------------EKMRDYAEKLRWKVRPER------QEEVEEF-CV--E----IGVNRK----------NFRIWMNNH---------------------------------KD------------KIIIDE-------------------------------------------------------------------------------------------------------------------------------- [204] 'gi|13277218|emb|CAC34408.1| ZF-HD homeobox protein [Flaveria bidentis]' ------------------------HHHHHPPPHTGVAYKQCLKNHAVGIGGHAVDGCGEFMPAPTYNPSQSFKCAACGCHRNFHRREPTTTTIATRTHF------------------------------------IDFHHHHPSTSASL-----------------------SPPSPPPEPTNFAVGPHLL------------------------------------------------------------------------------------------LSLGTAAEQNHTVATPETP-------------AAIK----------------IS--GRKRF----RTKFSQDQ---------------K--------------------EKMLTFAEKVGWKLQRCD------DKMVADF-CS--E----IGIRRR----------VLKVWMHNN---------------------------------KN------------TLAKKEQDTTATATVVTTATTVATGVDSAGVRSDDQENGSSFSS------------------------------------------------------------------------------------------ [236] 'gi|55296032|dbj|BAD69443.1| ZF-HD homeobox protein-like [Oryza sativa (japonica cultivar-group)]' MEL---------------SEHEEDVLTSAAPETIRCRYHECLRNHAAASGGHVVDGCGEFMPASTEE---PLACAACGCHRSFHRRDPSPGRAGAARLPQLH---------------------------------LPASINSRAPPALL-----------------------LPPAAAASKQGLPFPGYGTP-----------------------------------------------------------------------------------------SGGTGTTTASSSDERLRPS-------------P-------------------VQ--PRRRS----RTTFTREQ---------------K--------------------EQMLAFAERVGWRIQRQE------EATVEHF-CA--Q----VGVRRQ----------ALKVWMHNN---------------------------------KH------------SFKQKQQQENRQEQQQ---------------------------------------------------------------------------------------------------------------------- [215] 'gi|56693546|gb|AAW22594.1| zinc finger homeodomain protein SZF-HD1 [Glycine max]' MEN-----------------------SSSSSSCSNYLYRECLRNHAASLGSYATDGCGEFTLDVDSVSSPSLQCAACGCHRNFHRKVTCPAVEGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQAVTGGSGDMMEYSGGG-------------DVGRITEMGERS--------GG--SKKRF----RTKFSAEQ---------------K--------------------EKMLGFAEKLGWKLQRKEV-----DDEIERF-CK--S----VGVTRQ----------VFKVWMHNH---------------------------------KN------------NSNTSTNSSANLSSLTQS-------------------------------------------------------------------------------------------------------------------- [182] 'gi|50924422|ref|XP 472571.1| OSJNBa0088K19.15 [Oryza sativa (japonica cultivar-group)] >gi|32480091|emb|CAE01709.1| OSJNBb0086G' MDH---------------------EGGSAGGGGGGGKYKECMRNHAAAMGGQAFDGCGEYMPA----SPDSLKCAACGCHRSFHRRAAAGIGGGPVFFRPPPPPQPHSHHAALQGF-------------------LPSSVPAPAPPPQL-----------------------ALPYHAVPAAAWHHAAAAA------------------------------------------------------------------------------------------AGRAGSETPPRMDDFGPGS-------------AGGSGSGG------------GGIFGRKRF----RTKFTPEQ---------------K--------------------ERMREFAEKQGWRINRND------DGALDRF-CV--E----IGVKRH----------VLKVWMHNH---------------------------------KN------------QLASSPTSAAAAAAGVMNPGAGIGLGTGLGTGISGDGDGDDDDTDDSPPRAAVSSPSPSPISV----------------------------------------------------------------------- [277] lcl|Smo_MIF1_4_1_unnamed_protein_product MDS-----------------TLNPQDESKHRGGSPVLYKECVRNINAENGGEEVDGCQKFTAAGKDGSPEALKCAACGCHRNFHQQESETPTAIKGSDLTQFADDILGVVKK----------TKRK---------NTHRAINL------------------------------------------------------------------------------------------------------------ATQVLEHVSKLLNILAQVIDDPDDTGKVAASGQNSKAKAKEEKRTSCEE-------------ALAVVVASSKDKAQSPDD-STP--KEKRK----RTIFSAEQ---------------L--------------------TKLEALAESVHWSLGNIP------KDQQASA-AM--E----IGITVE----------SLKYWFHNR---------------------------------KQ------------KKKPTRKS------------------------------------------------------------------------------------------------------------------------------ [244] 'gi|56693548|gb|AAW22595.1| zinc finger homeodomain protein SZF-HD2 [Glycine max]' MEN---------------------------SSSSNYLYRECLRNHAASLGSYATDGCGEFTLDADSVSSPSLQCMACGCHRNFHRKVTCPVVEGP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QVVTGGSGDMMEYSGGE-------------GK---MEMGKRSGG------GT--TKKRF----RTKFSAEQ---------------K--------------------EKMLGFAEKLGWKLQRKEV-----DDEIERF-CK--S----VGVTRQ----------VFKVWMHNH---------------------------------KN------------NSNSSTNSSVNLSSLTQS-------------------------------------------------------------------------------------------------------------------- [176] 'gi|15239341|ref|NP 200856.1| transcription factor [Arabidopsis thaliana]' ---------------------------------MVVLYNECLKNHAVSLGGHALDGCGEFTPKSTTILTDSLRCDACGCHRNFHRRSPSDGFSQH-----------------------------------------------------R-----------------------SPPS-------------------------------------------------------------------------------------PLQLQPLAPVPNLLLSLS--SGFFGPSDQEVKNKFTVER-------------DVRKT---------------AM--IKKHK----RTKFTAEQ---------------K--------------------VKMRGFAERAGWKINGWD------EKWVREF-CS--E----VGIERK----------VLKVWIHNN---------------------------------KY------------FNNGRSRDTTSSMSLNLKL------------------------------------------------------------------------------------------------------------------- [189] 'gi|9757750|dbj|BAB08231.1| unnamed protein product [Arabidopsis thaliana]' MSS------------------LSKEQTIACARDMVVLYNECLKNHAVSLGGHALDGCGEFTPKSTTILTDSLRCDACGCHRNFHRRSPSDGFSQH-----------------------------------------------------R-----------------------SPPS-------------------------------------------------------------------------------------PLQLQPLAPVPNLLLSLS--SGFFGPSDQEVKNKFTVER-------------DVRKT---------------AM--IKKHK----RTKFTAEQ---------------K--------------------VKMRGFAERAGWKINGWD------EKWVREF-CS--E----VGIERK----------VLKVWIHNN---------------------------------KY------------FNNGRSRDTTSSMSLNLKL------------------------------------------------------------------------------------------------------------------- [204] 'gi|50918351|ref|XP 469572.1| putative ZF-HD homeobox protein [Oryza sativa (japonica cultivar-group)] >gi|28301934|gb|AAO38827.' MEQ--------------------------QQERPREVYRECMRNHAAKLGTYANDGCCEYTP--DDGHPAGLLCAACGCHRNFHRKDFLDGRATAAA--------------------------------------GGAGGAGVGVAPML-----------------------PAPGGGGPPGYMHM-----------------------------------------------------------------------------------------------AAMGGAVGGGGGVDGGGG----------------------------------SG--GRRRT----RTKFTEEQ---------------K--------------------ARMLRFAERLGWRMPKREPGRAPGDDEVARF-CR--E----IGVNRQ----------VFKVWMHNH---------------------------------KA------------GGGGGGGGSGGPGAGGGAQTSSSTTRGGGDVGVGLSPAMGGDGEDDEEVRGSEMCM------------------------------------------------------------------------------ [238] lcl|Ppa_MIF1_12_1_unnamed_protein_product MTNTNTAPRLRGQLANDDFLGFSPQNLQPKSGHCVIVCKECQNNHALDGVNHCIDGCGEFMRRGRDG-PEALQCMACGCHRRYHRCVGVGDNGNEPQNIDEADGAAPRISND----------DLQL---------SLSRTETVSPNLME-----------------------ATGRALSLLATDHPSRGADDLAIQDLDTVMKISIDNLDHI---------------------------------------STQRPVRTTDNRRRSQSLQFNHNN------LQQADRTSAPNWNAQ--------------------------------QGS-HPG--GPEIK----RKQFFDEQ---------------R--------------------RKMKAYAEHVGWTNFGQR------KENIAAA-CK--D----I?------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [258] lcl|Ppa_MIF1_7_1_unnamed_protein_product -------------------------------------------------------------------KDEALTCPPCGCHRNFHQRVVDACEEGEEEEL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVKAK----REKLNSGNYFSSFVDHCNIDRVAH--------------------ELMAVANEAL--------------ALAQDSI-CHGEG----RGLPENGVYSVEEHTIIAKISLENL---------------------------------DHITKVISSTTECLTLLRKRKSVNPRDKDVNKSKSCPHEGGPFSTDASPVITVENGAISLL--------------------------------------------------------------------------------------- [169] lcl|Ppa_MIF1_10_1_unnamed_protein_product MVT---------------------------GYNYSRNRGKCTKLHAHL--GPGVDGCQLFDGE----NSSSMLCGACGCHMSFHVKLNLGGSSHDLE-----------------------------------------------------------------------------------------------------------------------------------------------------------------NHELLDLEPGLKRCKMSLDASPAESVGDNIDSNPDLEVNSGP---------------------------------CPEDLLRVF----RSRKSEGQPPVFLQPVLIKPGRDEIRVNSSAPLYTETSLYTKLCSKLKLIQAGHPEDIHGKFSIVHDDVNGYRVY-CG--------GCNRH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YGIPKPGYSLGNLKEAI [214] lcl|Ppa_MIF1_11_1_unnamed_protein_product MGT---------------------------AFHNSRNRGKCTKMHAHL--GPGFDGCQLFDGE----NPNDVLCGACGCHMSFHVKLNLGDSKYRLE-----------------------------------------------------------------------------------------------------------------------------------------------------------------NHEVIDLEPGLKRCKMSFEASPAESVGDNLDSNPGVEVNSGT---------------------------------SQEDLLRVF----RSNRLEEQPPVFLQPASIKPERDEIRVNDSIPLYRETPLYTKLCSKLKLIQAEYPEAIHGKFSIVHDDVHGYRVY-CG--------GCDRH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YGIPKP?---------- [204] lcl|Smo_MIF1883621411_1_unnamed_protein_product --------------------------------------------------------------------MEALKCAACDCNGNFPKREWKASPS---------RERNRKAAAIAAGVL-----QQQQ---------QQQGGGHTPSALQT-----------------------TCNTAAATASALPLAASS-------------------------------------------------------------------------------------------AASLGPRTGNAPMSLLALS-------------SRGEGDHHDMSP--------LS--MKKRF----RTKFSMDQ---------------K--------------------EKMYMFAEKVGWRIQKHD------EAAVQHF-CA--E----VGVKRH----------VLKVWMHNN---------------------------------KH------------TFGKRSSLGSPSSSSIGGANVPPGPVVLVVALLLRLLRRLMICSSTTTTTIFSPIQLRCSVLRLYTNISSSPDDIFHPNHTRFKTRRSGQPTH----------------------------------------- [261] lcl|Smo_MIF1_15_1_unnamed_protein_product ----------?GAAKGIRGGGLALCETSSKSGAC------CQAQHPEKMGGSVV--IGELGEKASSSVRDVFKCAACGCNKHFHEPPTESEIG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TEAGAEAQGTPAPAPAPAP-------------AQVVDAGGIGDVLVANGV---------------RPQLGGVR----------------------------------------------------------------DGFGCT-------------------------KCWW---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [130] lcl|831_Cre_unnamed_protein_product ---TTTVADVRNHLHLKLGVPP-----------SRQRWLALQQRH---------AGCQLYMPAGYDNTMVALMLDDCRTLASYHLSTIKGSGGSGL-----------------------------------------------------------------------------------------------------------------------------------------------------------SSEASVAAAVFEDEFASAPLPPPAAPSTTAAAAVTSVTSAGLSSGASDS-------------CVLSGPGGGGYGYSCRQS--TA--TAEAT----TTQFANLMFGRASAPAAPLTTAAALFSLQHCQQQQQQQCPP---ALLSAFASE-----------------------CAAASGGAGAGGSSS----------AQQHWLHSSGAAHSGMMNSSGSQMVSGRAGLVGRVGGARHSRRSGDRFDWGGRVWVAPLRRHPGRAPAAAAPPAASAAASGTQDFVRRRVCCMLYLAPPLPPHTPQLP-----AATYDNPARSPPPYLGLPHLLPPLLLQVLQPSGSLASVQRLVGDMYESYEDPSGRSLFLM----------------- [380] ; END; BEGIN CODONS; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE=unord PolyTcount=MINSTEPS ; EXSET * UNTITLED = 1-70 94-637; END; BEGIN MacClade; Version 4.0 87; LastModified -1056313591; FileSettings editor '0' '0' '1' '1'; Singles 100; Editor 00011001111111100100010010 '1' '8' Geneva '12' '490' '1' all; EditorPosition 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