#NEXUS [MacClade 4.08 registered to Tomoaki Nishiyama, National Institute for Basic Biology] BEGIN DATA; DIMENSIONS NTAX=87 NCHAR=648; FORMAT DATATYPE=PROTEIN SYMBOLS = " 1 2 3 4" MISSING=? GAP=- ; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] 'gi|18410982|ref|NP 565123.1| SKP1 (ARABIDOPSIS SKP1 HOMOLOGUE); ubiquitin-protein ligase [Arabidopsis thaliana] >gi|21281127|gb' ------------------------------------------------------------------------------------------------------------------------------------------------------MSAKKIVLKSSDGESFEVEEAVALESQ-TIAHMVE-------------------D------DCVDNG-VPLPNVTSKILAKVIEYCKR-HVEAAA------------------SKAEA-----------VEGAATSDDDLKAWDADF-MK-I--DQATLFELILAANYLNIKNLLDLTCQTV-----ADMIKGKTPEEIRTTFNIKNDFTPEEEEE-VRRENQWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [160] 'gi|18958257|dbj|BAB85607.1| kinetochore protein [Brassica juncea]' ------------------------------------------------------------------------------------------------------------------------------------------------------MSTKKIVLKSSDGESFEVDEAVALESQ-TIAHMVE-------------------D------DCVDNG-IPLPNVTSKILAKVIEYCKK-HVDAAA------------------SKTEA-----------VDGGASSDDDLKAWDAEF-MK-I--DQATLFELILAANYLNIKNLLDLTCQTV-----ADMIKGKTPEEIRTTFNIKNDFTPEEEEE-VRRENQWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [160] 'gi|18958259|dbj|BAB85608.1| kinetochore protein [Brassica juncea]' ------------------------------------------------------------------------------------------------------------------------------------------------------MSTKKIVLKSSDGESFEVDEAVALESQ-TIAHMVE-------------------D------DCVDNG-VPLPNVTSKILAKVIEYCKK-HVDAAA------------------SKSEA-----------VDGGGSSDDDLKAWDAEF-MK-I--DQATLFELILAANYLNIKNLLDLTCQTV-----ADMIKGKTPEEIRTTFNIKNDFSPEEEEE-VRRENQWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [160] 'gi|18958253|dbj|BAB85605.1| kinetochore protein [Brassica juncea]' ------------------------------------------------------------------------------------------------------------------------------------------------------MSTKKIVLKSSDGESFEVDEAVALESQ-TIAHMVE-------------------D------DCVDNG-VPLPNVTSKILAKVIEYCKK-HVDAVA------------------SKSEA-----------VDGGGSSDDDLKAWDAEF-MK-I--DQATLFELILAANYLNIKNLLDLTCQTV-----ADMIKGKTPEEIRTTFNIKNDFSPEEEEE-VRRENQWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [160] 'gi|81248477|gb|ABB69022.1| SKP1 [Brassica napus]' ------------------------------------------------------------------------------------------------------------------------------------------------------MSTKKIVLKSSDNESFEVDEAVARESQ-TLAHMVE-------------------D------DCTDND-IPLPNVTGKILAKVIEYCKK-HVDAAA------------------AKTEA-----------ADGGASSDDDLKAWDAEF-MK-I--DQATLFELILAANYLNIKNLLDLTCQTV-----ADMIKGKTPEEIRTTFNIKNDFSPEEEEE-VRRENQWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [160] 'gi|18958255|dbj|BAB85606.1| kinetochore protein [Brassica juncea]' ------------------------------------------------------------------------------------------------------------------------------------------------------MSTKKIVLKSSDGESFEVDEAVARESQ-TLAHMVE-------------------D------DCIENG-IPLPNVTSKILAKVIEYCKK-HVDAAA------------------AKTEGA----------VDGAASSDDDLKAWDTEF-MK-I--DQATLFELILAANYLNIKNLLDLTCQTV-----ADMIKGKTPEEIRTTFNIKNDFSPEEEEE-VRRENQWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [161] 'gi|18958249|dbj|BAB85603.1| kinetochore protein [Brassica juncea]' ------------------------------------------------------------------------------------------------------------------------------------------------------MSTKKIVLKSSDDESFEVDEAVARESQ-TLAHMVE-------------------D------DCTDNG-IPLPNVTGKILAKVIEYCKK-HVDAAA------------------AKTEAT----------ADGGAPSDEDLKAWDAEF-MN-I--DQATLFELILAANYLNIKNLLDLTCQTV-----ADMIKGKTPDEIRTTFNIKNDFSPEEEEE-VRRENQWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [161] 'gi|3719211|gb|AAC63110.1| UIP2 [Arabidopsis thaliana]' ----------------------------------------------------------------------------------------------------------------------------------------------------PMSTVRKITLKSSDGENFEIDEAVALESQ-TIKHMIE-------------------D------DCTDNG-IPLPNVTSKILSKVIEYCKR-HVEAAE-------------------KSETTADAAAATTTTTVASGSSDEDLKTWDSEF-IK-V--DQGTLFDLILAANYLNIKGLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFTPEEEEE-VRRENQWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [172] 'gi|18422184|ref|NP 568603.1| ASK2 (ARABIDOPSIS SKP1-LIKE 2); ubiquitin-protein ligase [Arabidopsis thaliana] >gi|28466911|gb|AA' -----------------------------------------------------------------------------------------------------------------------------------------------------MSTVRKITLKSSDGENFEIDEAVALESQ-TIKHMIE-------------------D------DCTDNG-IPLPNVTSKILSKVIEYCKR-HVEAAE-------------------KSETTADAAAATTTTTVASGSSDEDLKTWDSEF-IK-V--DQGTLFDLILAANYLNIKGLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFTPEEEEE-VRRENQWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [171] 'gi|2673868|emb|CAA75117.1| fimbriata-associated protein [Antirrhinum majus]' ------------------------------------------------------------------------------------------------------------------------------------------------------LKTKKITLRSSDGEVFEVEESLALESQ-TIKHMIE-------------------D------DCADNV-IPLPNVTGKILSKVIEYCKR-HVDAAA------------------AKADDK----------LASTGTSDDELKAFDADF-VK-V--DQATLFDLILAANYLNIKTLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFTPEEEEE-VRRENQWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [161] 'gi|4959710|gb|AAD34458.1| Skp1 [Medicago sativa]' -------------------------------------------------------------------------------------------------------------------------------------------------------TTRKITLKSSDGETFEVDEAVALESQ-TIKHMIE-------------------D------DCADSG-IPLPNVTSKILAKVIEYCKK-HVDAAA--------------------AEDK---------------PNEDELKSWDSEF-VK-V--DQATLFDLILAANYLNIKSLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFSPEEEEE-VRRENQWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [153] 'gi|51292007|gb|AAT99735.1| SKP1 [Nicotiana tabacum]' -----------------------------------------------------------------------------------------------------------------------------------------------------MSSSKMIVLKSSDGETFEVEEAVALESQ-TIKHMIE-------------------D------DCADTS-IPLPNVTSKILAKVIEYCKR-HVDAT--------------------KTEDK---------------ASEDELKGFDSDF-VK-V--DQATLFDLILAANYLNIKSLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFTPEEEEE-VRRENAWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [155] 'gi|2673870|emb|CAA75118.1| fimbriata-associated protein [Antirrhinum majus]' --------------------------------------------------------------------------------------------------------------------------------------------------SSSDNASKKITLRSSDGEVFEVDEAIALLSQ-TIKHMIE-------------------D------DCADNV-IPLPNVTGKILSKVIEYCKR-HVDADA------------------AKSEEK----------VAAAAAGDDDLKAFDADF-VK-V--DQATLFDLILAANYLNIKTLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFTPEEEEE-VRRENQWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [165] 'gi|47054182|gb|AAT09201.1| skp1 protein [Oryza sativa (japonica cultivar-group)]' --------------------------------------------------------------------------------------------------------------------------------------------------MAAEGEKKMITLKSSDGEEFEVEEAVAMESQ-TIRHMIE-------------------D------DCADNG-IPLPNVNSKILSKVIEYCNK-HVHAAA------------------AAASKA--ADDAASAAAAVPPPSGEDLKNWDADF-VK-V--DQATLFDLILAANYLNIKGLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFTPEEEEE-IRRENQWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [173] 'gi|3551838|gb|AAC63273.1| SKP1-like protein [Nicotiana clevelandii]' --------------------------------------------------------------------------------------------------------------------------------------------------------MKMIVLRSSDGETFEVEESVALESQ-TIKHMIE-------------------D------DCADTS-IPLPNVTSKILAKVIEYCKR-HVDAAS-------------------KTEDK---------------AVEDDLKAFDADF-VK-V--DQSTLFDLILAANYLNIKSLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFTPEEEEE-VRRENAWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [153] 'gi|29468341|gb|AAO85510.1| SKP1 [Nicotiana benthamiana]' --------------------------------------------------------------------------------------------------------------------------------------------------------MKMIVLRSSDGETFEVEESVALESQ-TIKHMIE-------------------D------DCADTS-IPLPNVTSKILAKVIEYCKR-HVDAAS-------------------KTEDK---------------AVEDDLKAFDADF-VK-V--DQSTLFDLILAANYLNIKRLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFTPEEEEE-VRRENAWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [153] 'gi|77550711|gb|ABA93508.1| Skp1 family, dimerisation domain, putative [Oryza sativa (japonica cultivar-group)]' --------------------------------------------------------------------------------------------------------------------------------------------------MAAEGEKKMITLKSSDGEEFEVEEPVAMESQ-TIRHMIE-------------------D------DCADNG-IPLPNVNSKILSKVIEYCNK-HVHAAA------------------AAASKA--ADDAASAAAAVPPPSGEDLKNWDADF-VK-V--DQATLFDLILAANYLNIKGLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFTPEEEEE-IRRENQWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [173] 'gi|84579467|dbj|BAE72121.1| SKP1-like protein [Silene latifolia]' -------------------------------------------------------------------------------------------------------------------------------------------------MAESTESTKKILLKSSDGEDFEVDQIVALESQ-TIKHMIE-------------------D------DCADNA-IPLPNVTGKILSKVIEYCKK-HVEFAE------------------KNKGET---TTTTSAAGTGTTPVDDDLKNWDTEF-VK-V--DQNTLFDLILAANYLNIKSLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFTPEEEEE-VRRENQWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [173] 'gi|40644754|emb|CAE53885.1| putative SKP1 protein [Triticum aestivum]' -----------------------------------------------------------------------------------------------------------------------------------------------MAAAGDAGEKKMITLKSSDGEEFEVEEAVAMESQ-TIRHMIE-------------------D------DCADNG-IPLPNVNSKILSKVIEYCNK-HVQAKP------------------ADGAAA---AAGA-SDAAAPTAPAEDLKNWDAEF-VK-V--DQATLFDLILAANYLNIKGLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFTPEEEEE-IRRENQWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [174] 'gi|7378764|emb|CAB85491.1| putative kinetochore protein [Hordeum vulgare subsp. vulgare]' -----------------------------------------------------------------------------------------------------------------------------------------------MAAAGDAGEKKMITLKSSDGEEFEVEEAVAMESQ-TIRHMIE-------------------D------DCADNG-IPLPNVNSKILSKVIEYCNK-HVQAKP------------------ADAGAS---SDTASAA?GAPAAPAEDLKNWDAEF-VK-V--DQATLFDLILAANYLNIKGLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFTPEEEEE-IRRENQWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [175] 'gi|62467589|gb|AAX83944.1| Skp1 [Capsicum annuum]' -----------------------------------------------------------------------------------------------------------------------------------------------------MSAPKKILLKSSDGETFEVDEAVALESQ-TIKHMIE-------------------D------DCANTS-IPLPNVTSKILSKVVEYCKK-HVDAGA-------------------KTEDK---------------ASEDDLKSFDSEF-VK-V--DQGTLFDLILAANYLNIKSLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFTPEEEEE-VRRENAWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [156] 'gi|32330695|gb|AAP79890.1| SKP1/ASK1-like protein [Triticum aestivum]' -----------------------------------------------------------------------------------------------------------------------------------------------MAAAGDAGEKKMITLKSSDGEEFEVEEAVAMESQ-TIRHMIE-------------------D------DCADNG-IPLPNVNSKILSKVIEYCNK-HVQAKP------------------ADGAAA---GAGAGASDAAPAAPAEDLKNWDAEF-VK-V--DQATLFDLILAANYLNIKGLPDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFTPEEEEE-IRRENQWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [175] 'gi|47176688|gb|AAT12490.1| Skp1/Ask1-like protein [Zantedeschia hybrid cultivar]' ----------------------------------------------------------------------------------------------------------------------------------------------MAADAAAAGASKKLTLKSSDGEVFEVEETVAMESQ-TIRNLIE-------------------D------DCTADG-VPLPNVTGRILAKVIEFCKK-HVEIAA------------------LKADEG------------VDRAADEELKVWDADF-VK-V--DQTTLFDLILAANYLNIKSLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFTPEEEEE-VRRENQWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [167] 'gi|18418399|ref|NP 567959.1| ASK11 (ARABIDOPSIS SKP1-LIKE 11); ubiquitin-protein ligase [Arabidopsis thaliana] >gi|7270371|emb|' ---------------------------------------------------------------------------------------------------------M---------------------------------------------SSKMIVLMSSDGQSFEVEEAVAIQSQ-TIAHMVE-------------------D------DCVADG-IPLANVESKILVKVIEYCKKHHVDEA--------------------------------------NPISEEDLNNWDEKF-MD-L--EQSTIFELILAANYLNIKSLLDLTCQTV-----ADMIKGKTPEEIRSTFNIENDFTPEEEEA-VRKENQWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [152] lcl|Ppa_SKP1_27_2_unnamed_protein_product ---------------------------------------------------------------------------------------------------------M---------------------------------------------AEKRVKLKSSDDEMFEVDEAVAFESQ-AVKNMIE-------------------D------TGIDAP-IPLPNVSSKILAKVIEYCKY-HVENQK-------------------PSDDK-------------QATPEEEIKAWDADF-VK-V--DQATLFDLILAANYLNIKNLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFTPEEEEE-VRRENQWAFEVNLGSAESRKYAE------------------------------------------------------------IFLQVEEMIVSALKYRIH---------------------------------------------------------------------NHRLVQETTDLSPSILNDKEIIERHLLYATLQMVAAKAGNIFFEYY----------------------------------------------------------------- [234] lcl|Ppa_SKP1_42_1_unnamed_protein_product ---------------------------------------------------------------------------------------------------------M---------------------------------------------AEQRVKLRSSDDEMFEVDEAVAFESQ-AVKNMIE-------------------D------TGKDAV-IPLPNVSSKILAKVIEYCKY-HVDNQK------------------GATDDK-------------PAASEDDIKAWDADF-VK-V--DQATLFDLILAANYLNIKNLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFTPEEEEE-HYRQSGADIM------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [158] lcl|Ppa_SKP1_12_2_unnamed_protein_product ---------------------------------------------------------------------------------------------------------M-----------------------------HAYNYMQMHFQGSPNMAEKRVKLISSDNDEFEVDEAVAFESE-TLRNMIQ-------------------D------TGTNVP-ISIPNVSSDILAKVLEYCSY-HAETME------------------THDDK--------------PPITDAQIREWDADF-VD-V--HPATLYSLILAANYLNIKNLLDLICQAV-----ANNIRGKTAVEIRKILHIQDDFTYEEEME-IRRETKWAFD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [173] 'gi|18418454|ref|NP 567967.1| ASK12; protein binding / ubiquitin-protein ligase [Arabidopsis thaliana] >gi|7270397|emb|CAB80164.' ---------------------------------------------------------------------------------------------------------M---------------------------------------------SSKMIVLMSSDGQSFEVEEAVAIQSQ-TIAHMVE-------------------D------DCVADG-IPLANVESKILVKVIEYCKKYHVDEA--------------------------------------NPISEEDLNKWDEKF-MD-L--EQSTIFELILAANYLNIKSLFDLTCQTV-----ADMIKGKTPEEIRSTFNIENDFTPEEEEA-VRKENQWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [152] 'gi|18394828|ref|NP 564105.1| ASK4; ubiquitin-protein ligase [Arabidopsis thaliana] >gi|20466137|gb|AAM19990.1| At1g20140/T20H2' ---------------------------------------------------------------------------------------------------------M-------------------------------------------AETKKMIILKSSDGESFEIEEAVAVKSQ-TIKHMIE-------------------D------DCADNG-IPLPNVTGAILAKVIEYCKK-HVEAAA------------------EAGGDK----------DFYGSAENDELKNWDSEF-VK-V--DQPTLFDLILAANYLNIGGLLDLTCKAV-----ADQMRGKTPEQMRAHFNIKNDYTPEEEAE-VRNENKWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [163] 'gi|84579461|dbj|BAE72118.1| SKP1-like protein [Silene latifolia]' ---------------------------------------------------------------------------------------------------------M----------------------------------------AETTTTSRKIMLKSSDGENFVVDEIVALESQ-TIKHMIE-------------------D------ECADNA-IPLPNVTAKTLSKVIEYCKK-HVNAAA------------------AKTADT------ATTSTAGVAGGDDELKKWDEKF-MK-V--DQNTLFDICLAANYLNIKDLLDLTCQTV-----ADMIKNMMPEEVRKVFNITNDFTPEEEAE-IRKEHQWAFEI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [171] lcl|Smo_SKP1_4_2_unnamed_protein_product ---------------------------------------------------------------------------------------------------------M----------------------------------------------STKVKLRSSDGEMFEVDEAVALESQ-TVKNMIE-------------------D------TGSDAP-IPLPNVPSKILAKVIEYSKY-HVDAQK------------------SGDDSK-------------VVPTEEEIKAWDAEF-VK-V--DQATLFDLILAANYLNIRNLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFTPEEEEE-VRRENQWAFETRFHGPSPGTTVEGVRSDLSSPPAARSTISRCGIWKPGTLATFWNLPDEPAFKQHHQAQLPVLGKQKFDPKPRITVNEVKKVASDLKRGGGVGLGNPKQSFLEQKQANLEKQQGSSGLDKRFKTLPPSEMLPRNETLGGYIFVCNNDTMQEDLKRQLFGLPQRYRDSVRAIQPGLPLFLYNYTTHQLHGVYEAASFGGSNIDPTAWEDKKCRGESRFPAQVRIRVRMNYKPLEEDAFRPVLHHYDGPKFRLQLSVPETLMLLDLFSDKGSA [428] lcl|Smo_SKP1_71_2_unnamed_protein_product ---------------------------------------------------------------------------------------------------------M----------------------------------------------STKVKLRSSDGEMFEVDEAVALESQ-TVKNMIE-------------------D------TGSDAP-IPLPNVPSKILAKVIEYSKY-HVDAQK------------------SGDDSK-------------VVPTEEEIKAWDAEF-VK-V--DQATLFDLILAANYLNIRNLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFTPEEEEE-AFKQHHQA------------------------------------------------------------QLPVLGKQKFDPKPRITVNEVKKVASDLKRGGGVGLGNPKQSFLEQKQANLEKQQGSSGLDKRFKTLPPSEMLPRNETLGGYIFVCNNDTMQEDLKRQLFGLPQRYRDSVRAIQPGLPLFLYNYTTHQLHGVYEAASFGGSNIDPTAWEDKKCRGESRFPAQVRIRVRMNYKPLEEDAFRPVLHHYDGPKFRLQLSVPETLMLLDLFSDKGSA [368] 'gi|18400912|ref|NP 565604.1| ASK3; protein binding / ubiquitin-protein ligase [Arabidopsis thaliana] >gi|22655042|gb|AAM98112.1' ---------------------------------------------------------------------------------------------------------M-------------------------------------------AETKKMIILKSSDGESFEVEEAVAVESQ-TIKHMIE-------------------D------DCVDNG-IPLPNVTGAILAKVIEYCKK-HVEAAA------------------EAGGDK----------DFYGSTENHELKTWDNDF-VK-V--DHPTLFDLLRAANYLNISGLLDLTCKAV-----ADQMRGKTPAQMREHFNIKNDYTPEEEAE-VRNENRWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [163] 'gi|52076056|dbj|BAD46569.1| putative UIP2 [Oryza sativa (japonica cultivar-group)]' ---------------------------------------------------------------------------------------------------------M----------------------------------------AAEAETKAMITLRSCEGQVFEVAEAVAMESQ-TIRHMIE-------------------D------KCADTG-IPLPNVSAKILSKVIEYCSK-HVEARG------------------GAAAAA-DGDAPAPAAVEANKAVEDELKTFDAEF-VK-V--DQSTLFDLILAANYLNIKGLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFTPEEEEE-VRRENQWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [175] 'gi|84579465|dbj|BAE72120.1| SKP1-like protein [Silene latifolia]' ---------------------------------------------------------------------------------------------------------MAAAIEGSSSSTATEAMADAIGVSSSPTATEAMAAAIKLSLSSGATETKKIVLKSSDDEEFEVEEAVALQSQ-TIKHMIE-------------------D------DCADNA-IPLPNITAYILDKVIEYCEK-HVEASH------------------TYTPSD-------------TPSPADQLKKWDAEF-AK-V--DQDTLFDIMLAANYLNIKGLLDLTCQTV-----ANMMKGKTPEEIRETFHIINDYTPEEEEE-VRRGIQWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [203] 'gi|18411415|ref|NP 567090.1| ASK13; protein binding / ubiquitin-protein ligase [Arabidopsis thaliana] >gi|7019695|emb|CAB75820.' ---------------------------------------------------------------------------------------------------------M----------------------------------------------SKMVMLLSSDGESFQVEEAVAVQSQ-TIAHMIE-------------------D------DCVANG-VPIANVTGVILSKVIEYCKK-HVVSDS------------------P------------------TEESKDELKKWDAEF-MK-ALEQSSTLFDVMLAANYLNIKDLLDLGCQTV-----ADMITGKKPDEIRALLGIENDFTPEEEEE-IRKENQWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [154] 'gi|18403171|ref|NP 566694.1| ASK9 (ARABIDOPSIS SKP1-LIKE 9); ubiquitin-protein ligase [Arabidopsis thaliana] >gi|11994652|dbj|B' ---------------------------------------------------------------------------------------------------------M---------------------------------------------STKKIILKSSDGHSFEVEEEAARQCQIIIAHMSE-------------------N------DCTDNG-IPLPNVTGKILAMVIEYCNKHHVDAA--------------------------------------NPCSDDDLKKWDKEF-ME-K--DTSTIFDLIKAANYLNIKSLFDLACQTV-----AEIIKGNTPEQIREFFNIENDLTPEEEAA-IRRENKWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [153] lcl|3706_Cre_unnamed_protein_product ---------------------------------------------------------------------------------------------------------M----------------------------------------------ATKVKLMSSDAQMFEVDEDVAFQSQ-TVKNLVE-------------------D------AGTEDA-IPLPNVSGRILAKVIEYSKY-HVEAEK------------------KGADDK-------------PTKTEDDVKRWDDEF-VK-V--DQATLFDLILAANYLNIKGLLDLTCQTV-----AQMIKGKTPEEIRKTFNIKNDFTPEEEEE-VRRENQWAFD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [157] 'gi|18403174|ref|NP 566695.1| ASK10; ubiquitin-protein ligase [Arabidopsis thaliana] >gi|67633652|gb|AAY78750.1| E3 ubiquitin li' ---------------------------------------------------------------------------------------------------------M---------------------------------------------STKKIILKSSDGHSFEVEEEAACQCQ-TIAHMSE-------------------D------DCTDNG-IPLPEVTGKILEMVIEYCNKHHVDAA--------------------------------------NPCSDEDLKKWDKEF-ME-K--YQSTIFDLIMAANYLNIKSLLDLACQTV-----ADMIKDNTVEHTRKFFNIENDYTHEEEEA-VRRENQWGFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [152] 'gi|18395497|ref|NP 565296.1| ASK14; protein binding / ubiquitin-protein ligase [Arabidopsis thaliana] >gi|67633516|gb|AAY78682.' ---------------------------------------------------------------------------------------------------------M---------------------------------------------SSNKIVLSSSDGESFEVEEAVARKLK-IVEHMIE-------------------D------DCVVTE-VPLQNVTGKILSIVVEYCKK-HVVD-----------------------------------------EESDEFKTWDEEF-MKKF--DQPTVFQLLLAANYLNIKGLLDLSAQTV-----ADRIKDKTPEEIREIFNIENDFTPEEEAA-VRKENAWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [149] 'gi|18404608|ref|NP 566773.1| ASK15; ubiquitin-protein ligase [Arabidopsis thaliana]' ---------------------------------------------------------------------------------------------------------M---------------------------------------------SSNKIVLTSSDGESFQVEEVVARKLQ-IVKHLLE-------------------D------DCVINE-IPLQNVTGNILSIVLEYCKK-HVDDVV---------------------DDDASEEPK---KKKPDDEAKQNLDAWDAEF-MKNI--DMETIFKLILAANYLNVEGLLGLTCQTV-----ADYIKDKTPEEVRELFNIENDFTHEEEEEAIRKENAWAFEADTKHEDPKP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [177] 'gi|47680278|gb|AAT37114.1| skp1-like protein [Oryza sativa (japonica cultivar-group)]' ---------------------------------------------------------------------------------------------------------M---------------------------------------AATADNGEKMIVLISSDGERFELSEAAASQSK-TLSHMIE-------------------D------DCTDNG-VPLPNVTAVVLAKVVEYFKK-HAAVTP---------------------------KPATEAVAADKAKREEELKSFDAEF-VD-V--DRTMLFELILAANFLNAQDLLDLTCQHA-----ADLIKDMSVEEVREVFNITNDFTPEEEAE-VRKENAWAFDN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [169] 'gi|18395500|ref|NP 565297.1| ASK16 (ARABIDOPSIS SKP1-LIKE 16); ubiquitin-protein ligase [Arabidopsis thaliana] >gi|52421309|gb|' ---------------------------------------------------------------------------------------------------------M---------------------------------------------SSNKIVLTSSDDESFEVEEAVARKLK-VIAHMID-------------------D------DCADKA-IPLENVTGNILALVIEYCKK-HVLDDV--------------------DDSDDSTEAT---SENVNEEAKNELRTWDAEF-MKEF--DMETVMKLILAVNYLNVQDLLGLTCQTV-----ADHMKDMSPEEVRELFNIENDYTPEEEDA-IRKENAWAFEDLK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [170] 'gi|50945101|ref|XP 482078.1| putative SKP1-like protein [Oryza sativa (japonica cultivar-group)] >gi|33243056|gb|AAQ01198.1| SK' ---------------------------------------------------------------------------------------------------------M---------------------------------------AATADNGEKMILLISSDGERFELSEAAASQSK-TLSHMIE-------------------D------DCTDNG-VPLPNVTAVVLAKVVEYFKK-HAAVTP---------------------------KPATEAVAADKAKREEELKSFDAEF-VD-V--DRTMVFELILAANFLNAQDLLDLTCQHA-----ADLIKDMSVEEVREVFNITNDFTPEEEAE-VRKENAWAFDN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [169] 'gi|11994756|dbj|BAB03085.1| kinetechore (Skp1p-like) protein-like [Arabidopsis thaliana]' ---------------------------------------------------------------------------------------------------------M---------------------------------------------SSNKIVLTSSDGESFQVEEVVARKLQ-IVKHLLE-------------------D------DCVINE-IPLQNVTGNILSIVLEYCKK-HVDDVV---------------------DDDASEEPK---GDDASEEAKQNLDAWDAEF-MKNI--DMETIFKLILAANYLNVEGLLGLTCQTV-----ADYIKDKTPEEVRELFNIENDFTHEEEEEAIRKENAWAFEADTKHEDPKP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [177] 'gi|50899284|ref|XP 450430.1| putative kinetochore protein [Oryza sativa (japonica cultivar-group)] >gi|49388741|dbj|BAD25941.1|' ---------------------------------------------------------------------------------------------------------M------------------------------------AAANDGADAGDSKILLISSDGQHFQVTEAEASMSK-LVSNMIE-------------------D------DCTENG-VPLPNVASNVLAKVLDYCKK-HAAAAA--------------------------------AAAEDVAVKDQELKSFDASF-ID-V--DNTMLFGLILAANYLNVPSLLDLACQHT-----ADLIKGKTVQEIRDTFGIVNDFTPEEEEE-IRKENEWAFEN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [167] 'gi|50945097|ref|XP 482076.1| putative SKP1 [Oryza sativa (japonica cultivar-group)] >gi|40253354|dbj|BAD05286.1| putative SKP1' ---------------------------------------------------------------------------------------------------------M---------------------------------------AATADNGEKMILLISSDGERFELSEAAASQSK-TLSHMIE-------------------D------DCTDNG-VPLPNVTAVVLVKVVEYFKK-HAAVTP---------------------------KPATEAVVADKAKREEELKSFDAEF-VD-V--DRTMLFELILAANFLNAQDLLDLTCQHA-----ADLIKDMSVEEVREVFNITNDFTPEEEAE-VRKENAWAFDN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [169] 'gi|50899298|ref|XP 450437.1| putative SKP1 [Oryza sativa (japonica cultivar-group)] >gi|49388748|dbj|BAD25948.1| putative SKP1' ---------------------------------------------------------------------------------------------------------M------------------------------------AAVKEGADAGDSKILLISSDGQHFQVTEAEASMSK-LVSNMIE-------------------D------GCTENG-VPLPNVASNVLAKVLEYCKK-HAAA----------------------------------AAAEDVAVKDQELKSFDASF-ID-V--DNTMLFNLILAANYLNVPSLLDLACQHT-----ADLIKGKTVQEIRDMFGIVNDFTPEEEEE-IRKENEWAFEN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [165] 'gi|18395495|ref|NP 565295.1| ASK19; ubiquitin-protein ligase [Arabidopsis thaliana] >gi|67633514|gb|AAY78681.1| putative E3 ubi' ---------------------------------------------------------------------------------------------------------M---------------------------------------------SSKKIVLTSSDGESFKVEEVVARKLQ-IVGHIIE-------------------D------DCATNK-IPIPNVTGEILAKVIEYCKK-HVEDDDDVVETHESSTKGDKTVEEAKKKPDDVAVPESTEGDDEAEDKKEKLNEWDAKF-MKDF--DIKTIFDIILAANYLNVQGLFDLCSKTI-----ADYIKDMTPEEVRELFNIENDFTPEEEEA-IRNENAWTFEQDGKQQVPKP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [200] 'gi|34899668|ref|NP 911180.1| putative Skp1 [Oryza sativa (japonica cultivar-group)] >gi|50509630|dbj|BAD31474.1| putative Skp1' ---------------------------------------------------------------------------------------------------------M-------------------------------AAEKKEVADAAAGSGSDTILLISSDGEHFNVPSAAASLSQ-LVSNMIE-------------------D------DCTTNG-VPLPNVASKVLAKVIEYCIK-HAAA---------------------------------------GEEEEKDLKSFDAEF-ID-V--DKNMLYDLLLASNFMNIKSLLDLCCQHT-----ANLIKGKSPEQIRKEFGIKNDFTPEEEEE-IRKENTWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [164] 'gi|34899656|ref|NP 911174.1| putative kinetochore protein [Oryza sativa (japonica cultivar-group)] >gi|50509625|dbj|BAD31469.1|' ---------------------------------------------------------------------------------------------------------M----------------------------------AAAAAEATTDGGGKMIILISADGKRFEVTEAVASQSQ-LISNMIE-------------------D------DCTENG-VRLPNVDGDILTMVVDYCNM-HAGDAA------------------AAGDTM------------KASSTEEELKKFDAEL-VQAL--ENPVLFKLILAANFLNIKSLLDMTCQRV-----ADMMSGKTPEQMRETFSIENDFTPEEEAA-IRQENAWAFDD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [172] 'gi|18411417|ref|NP 567091.1| ASK5; ubiquitin-protein ligase [Arabidopsis thaliana] >gi|67633710|gb|AAY78779.1| putative E3 ubiq' ---------------------------------------------------------------------------------------------------------M----------------------------------------------STKIMLKSSDGKSFEIDEDVARKSI-AINHMVE-------------------D------GCATDV-IPLRNVTSKILKIVIDYCEK-HV-----------------------------------------KSKEEEDLKEWDADF-MKTI--ETTILFDVMMAANYLNIQSLLDLTCKTVSDLLQADLLSGKTPDEIRAHFNIENDLTAEEVAK-IREENQWAFQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [153] 'gi|18403167|ref|NP 566692.1| ASK8; ubiquitin-protein ligase [Arabidopsis thaliana] >gi|67633650|gb|AAY78749.1| putative E3 ubiq' ---------------------------------------------------------------------------------------------------------M---------------------------------------------STKKIMLKSSEGKTFEIEEETARQCQ-TIAHMIE-------------------A------ECTDNV-ILVLKMTSEILEMVIEYCNKHHVDAA--------------------------------------NPCSDDDLEKWDKEF-ME-K--DKSTIFALTNAANFLNNKSLLHLAGQTV-----ADMIKGNTPKQMREFFNIENDLTPEEEAA-IRRENKWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [152] 'gi|47221745|emb|CAG08799.1| unnamed protein product [Tetraodon nigroviridis] >gi|47205948|emb|CAF90394.1| unnamed protein produ' ---------------------------------------------------------------------------------------------------------M-----------------------------------------------PTIKLQSSDGEIFEVDVEIAKQSV-TIKTMLE-------------------DLGMDD-DGDDDP-VPLPNVNAAILKKVIQWCTH-HKDDPP------------------PPEDDE------------NKEKRTDDIPVWDQEF-LK-V--DQGTLFELILAANYLDIKGLLDVTCKTV-----ANMIKGKTPEEIRKTFNIKNDFTEEEEAQ-VRKENQWCEEK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [163] gi|1583224|prf||2120310B_RNA_polymerase_II_elongation_factor ---------------------------------------------------------------------------------------------------------M-----------------------------------------------PTIKLQSSDGEIFEVDVEIAKQSV-TIKTMLE-------------------DLGMDD-DGDDDP-VPLPNVNAAVLKKVIQWCTH-HKDDPP------------------PPEDDE------------NKEKRTDDIPVWDQEF-LK-V--DQGTLFELILAANYLDIKGLLDVTCKTV-----ANMIKGKTPEEIRKTFNIKNDFTEEEEAQ-VRKENQWCEEK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [163] 'gi|74177667|dbj|BAE38934.1| unnamed protein product [Mus musculus]' ---------------------------------------------------------------------------------------------------------M-----------------------------------------------PTIKLQSSDGEIFEVDVEIAKQSV-TIKTMLE-------------------DLGMDN-EGDDDP-VPLPNVNAAILKKVIQWCTH-HKDDPP------------------PPEDDE------------NKEKRTDDIPVWDQEF-LK-V--DQGTLFELILAANYLDIKGLLDVTCKTV-----ANMIKGKTPEEIRKTFNIKNDFTEEEEAQ-VRKENQWCEEK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [163] 'gi|55239915|gb|EAA10209.2| ENSANGP00000011120 [Anopheles gambiae str. PEST] >gi|58386527|ref|XP 314827.2| ENSANGP00000011120 [A' ---------------------------------------------------------------------------------------------------------M-----------------------------------------------PTIKLQSSDGEIFDTDVQIAKCSG-TIKTMLE-------------------DLGMD--EGDDEV-VPLPNVNSAILRKVLQWATF-HKDDPI------------------PVEDDD------------SKEKRTDDISSWDADF-LK-V--DQGTLFELILAANYLDIKGLLDVTCKTV-----ANMIKGKTPEEIRKTFNIKNDFTPAEEEQ-VRKENEWCEEK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [162] 'gi|37748746|gb|AAH59536.1| S-phase kinase-associated protein 1A [Danio rerio] >gi|49619153|gb|AAT68161.1| S-phase kinase-associ' ---------------------------------------------------------------------------------------------------------M-----------------------------------------------PTIKLQSSDGEMFEVDVEIAKQSV-TIKTMLE-------------------DLGMDD-EGDDDP-VPLPNVNAAILKKVIQWCTH-HKDDPP------------------PPEDDE------------NKEKRTDDIPVWDQEF-LK-V--DQGTLFELILAANYLDIKGLLDVTCKTV-----ANMIKGKTPEEIRKTFNIKNDFTEEEEAQ-VRKENQWCEEK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [163] 'gi|26347143|dbj|BAC37220.1| unnamed protein product [Mus musculus] >gi|31560543|ref|NP 035673.2| S-phase kinase-associated prot' ---------------------------------------------------------------------------------------------------------M-----------------------------------------------PTIKLQSSDGEIFEVDVEIAKQSV-TIKTMLE-------------------DLGMDD-EGNDDP-VPLPNVNAAILKKVIQWCTH-HKDDPP------------------PPEDDE------------NKEKRTDDIPVWDQEF-LK-V--DQGTLFELILAANYLDIKGLLDVTCKTV-----ANMIKGKTPEEIRKTFNIKNDFTEEEEAQ-VRKENQWCEEK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [163] 'gi|90075782|dbj|BAE87571.1| unnamed protein product [Macaca fascicularis]' ---------------------------------------------------------------------------------------------------------M-----------------------------------------------PSIKLQSSDGEIFEVDVEIAKQSV-TIKTMLE-------------------DLGMDD-EGDDDP-VPLPNVNAAILKKVIQWCTH-HKDDPP------------------PPGDDE------------NKEKRTDDIPVWDQEF-LK-V--DQGTLFELILAANYLDIKGLLDVTCKTV-----ANMIKGKTPEEIRKTFNIKNDFTEEEEAQ-VRKENQWCEEK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [163] 'gi|55624768|ref|XP 517933.1| PREDICTED: similar to S-phase kinase-associated protein 1A isoform b; organ of Corti protein 2; tr' MAMFGMEASLEVNRHRCLKDLSRPVGVRHPVDESARRFQSWGEAKALPAPRSPGQLPPAAPCRLPAWARPAVLGLPSGDLGGHPKPRYINEHILMYSLDLNSSSQM-----------------------------------------------PSIKLQSSDGEIFEVDVEIAKQSV-TIKTMLE-------------------DLGMDD-EGDDDP-VPLPNVNAAILKKVIQWCTH-HKDDPP------------------PPEDDE------------NKEKRTDDIPVWDQEF-LK-V--DQGTLFELILAANYLDIKGLLDVTCKTV-----ANMIKGKTPEEIRKTFNIKNDFTEEEEAQ-VRKENQWCEEK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [268] 'gi|25777713|ref|NP 733779.1| S-phase kinase-associated protein 1A isoform b [Homo sapiens] >gi|62858085|ref|NP 001016519.1| hyp' ---------------------------------------------------------------------------------------------------------M-----------------------------------------------PSIKLQSSDGEIFEVDVEIAKQSV-TIKTMLE-------------------DLGMDD-EGDDDP-VPLPNVNAAILKKVIQWCTH-HKDDPP------------------PPEDDE------------NKEKRTDDIPVWDQEF-LK-V--DQGTLFELILAANYLDIKGLLDVTCKTV-----ANMIKGKTPEEIRKTFNIKNDFTEEEEAQ-VRKENQWCEEK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [163] 'gi|56090475|ref|NP 001007609.1| S-phase kinase-associated protein 1A [Rattus norvegicus] >gi|74220769|dbj|BAE31355.1| unnamed p' ---------------------------------------------------------------------------------------------------------M-----------------------------------------------PTIKLQSSDGEIFEVDVEIAKQSV-TIKTMLE-------------------DLGMDD-EGDDDP-VPLPNVNAAILKKVIQWCTH-HKDDPP------------------PPEDDE------------NKEKRTDDIPVWDQEF-LK-V--DQGTLFELILAANYLDIKGLLDVTCKTV-----ANMIKGKTPEEIRKTFNIKNDFTEEEEAQ-VRKENQWCEEK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [163] 'gi|55731584|emb|CAH92499.1| hypothetical protein [Pongo pygmaeus]' ---------------------------------------------------------------------------------------------------------M-----------------------------------------------PSIKLQSSDGEIFEVDVEIAKQSV-TIKAMLE-------------------DLGMDD-EGDDDP-VPLPNVNAAILKKVIQWCTH-HKDDPP------------------PPEDDE------------NKEKRTDDIPVWDQEF-LK-V--DQGTLFELILAANYLDIKGLLDVTCKTV-----ANMIKGKTPEEIRKTFNIKNDFTEEEEAQ-VRKENQWCEEK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [163] 'gi|82407882|pdb|2AST|A Chain A, Crystal Structure Of Skp1-Skp2-Cks1 In Complex With A P27 Peptide >gi|82407879|pdb|2ASS|A Chain' ---------------------------------------------------------------------------------------------------------------------------------------------------------ASIKLQSSDGEIFEVDVEIAKQSV-TIKTMLE-------------------DLGMDD-EGDDDP-VPLPNVNAAILKKVIQWCTH-HKDDPP------------------PPEDDE------------NKEKRTDDIPVWDQEF-LK-V--DQGTLFELILAANYLDIKGLLDVTCKTV-----ANMIKGKTPEEIRKTFNIKNDFTEEEEAQ-VRKENQWC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [159] 'gi|73971203|ref|XP 531908.2| PREDICTED: similar to S-phase kinase-associated protein 1A isoform b [Canis familiaris]' ---------------------------------------------------------------------------------------------------------M-----------------------------------------------PSIKLPSSDGEIFEVDVEIAKQSV-TIKTMLE-------------------DLGMDD-EGDDDP-VPLPNVNAAILKKVIQWCTH-HKDDPP------------------PPEDDE------------NKEKRTDDIPVWDQEF-LK-V--DQGTLFELILAANYLDIKGLLDVTCKTV-----ANMIKGKTPEEIRKTFNIKNDFTEEEEAQ-VRKENQWCEEK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [163] 'gi|67083917|gb|AAY66893.1| SCF ubiquitin ligase complex [Ixodes scapularis]' ---------------------------------------------------------------------------------------------------------M-----------------------------------------------PNIKLQSSDGEVFDVDVEIAKASV-TIKTMLE-------------------DLGMD--DDEDEV-VPLPNVNSAILKKVIHWATY-HKDDPP------------------PPEDDE------------NKEKRTDDISSWDADF-LK-V--DQGTLFELILAANYLDIKGLLDVTCKTV-----ANMIKGKTPEEIRKQFNIKNDFTPSEEEQ-VRKENEWCEEK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [162] 'gi|18391128|ref|NP 563864.1| ASK18; protein binding / ubiquitin-protein ligase [Arabidopsis thaliana] >gi|28394095|gb|AAO42455.' ---------------------------------------------------------------------------------------------------------M--------------------ASSSEEIVSAGESSEIEEAVASLTMSSNKILLTSSDGESFEIDEAVARKFL-IIVHMME-------------------D------NCAGEA-IPLENVTGDILSKIIEYAKM-HVNEPS---------------------------------EEDEDEEAKKNLDSWDAKF-MEKL--DLETIFKIILAANYLNFEGLLGFASQTV-----ADYIKDKTPEEVREIFNIENDFTPEEEEE-IRKENAWTFNE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [183] 'gi|76668728|ref|XP 588564.2| PREDICTED: similar to S-phase kinase-associated protein 1A isoform b [Bos taurus]' ---------------------------------------------------------------------------------------------------------M-----------------------------------------------PSIKLQSSDGEIFEVDVEIAKQSV-TIKTMLE-------------------DLGMDD-EGDDDP-VPLPNVNAAILKKVIQWCTH-HKDDPP------------------PPEDDE------------NKEKRTDDIPVWDQEF-LK-V--DQGTLFELILAANYLDIKGLLDVTCKTV-----ANMIKGKTPEEIQKTFNIKNDFTEEEEAQ-VRKENQWCEEK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [163] 'gi|55978022|gb|AAV68611.1| Skp1 [Ostreococcus tauri]' ---------------------------------------------------------------------------------------------------------M------------------------------------------------TVTLRSSDDETFVVDDDVAL-SE-TIKSIIEGARDGRDGVNGAKDGVRDAD------TEDESM-VPLPNVSSKILAKVIEYAKF-HVDAKK-------------------------------------ANEAEAKIKEFNTEF-VK-V--DQATLFEIILAANYLNMKGLLDLTCMTV-----ANMMKGKTPEEIRKTFNIKNDFTPEEEEE-VRKENQWAFD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [167] 'gi|16024893|gb|AAL11454.1| Skp1 [Physarum polycephalum]' ---------------------------------------------------------------------------------------------------------M-----------------------------------------AAEASAGTLKLESSDNKVFTVPTVVAQQSV-TIKNMLE-------------------DIG----DGADAP-IPLPNVTGYILEKVIDYLVH-HHEHPE------------------PTPDEK-------------AEKRTDNISGWDKDF-CN-V--DQPTLFELILAANYLDIKPLLDVTCKTV-----ANMIKGKTPEEIRKTFNIKNDFTPEEEEA-IRKENEWCEEK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [165] 'gi|21555166|gb|AAM63794.1| SKP1/ASK1 (At18), putative [Arabidopsis thaliana]' ---------------------------------------------------------------------------------------------------------M---------------------------------------------SSNKILLTSSDGESFEIDEAVARKFL-IIVHMME-------------------D------NCAGEA-IPLENVTGDILSKIIEYAKM-HVNEPS---------------------------------EEDEDEEAKKNLDSWDAKF-MEKL--DLETIFKIILAANYLNFEGLLGFASQTV-----ADYIKDKTPEEVREIFNIENDFTPEEEEE-IRKESAWTFNE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [158] 'gi|9082295|gb|AAF82795.1| SKP1gamma1 protein [Brassica napus]' ---------------------------------------------------------------------------------------------------------M-------------------------------------------SESNKKISLISSEGEAFEVSEAVAREFE-IVAHMLE-------------------D------GCSGSS-IPITTVDSNILGKVIEYCTK-HVEVGN---------------------------------VEGNSEKAEKDLEEFDKRF-IA-V--EMNTLFSLILAANYLNVKGLLNIGCQKV-----ADTIKDMKPEEVRSIFNIENDYTPAEEEV-VRKENEWAFQP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [159] 'gi|34899654|ref|NP 911173.1| putative Skp1 [Oryza sativa (japonica cultivar-group)] >gi|50509624|dbj|BAD31468.1| putative Skp1' ---------------------------------------------------------------------------------------------------------M--------------------------------------AADKKEVADDTILLISSDGEHFNVPSAAASLSQ-LVSNMIE-------------------N------DCTTNG-VPLPNVASKVLAKVIEYCVK-HAAA---------------------------------------AEDEEKELKSFDAEFMID-V--DKNMLYGLLLASNFLNIKSLLDLCCQHT-----ANLIKGKSPEQIRKEFGIKNDFTPE-EEE-IRKENTWAFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [157] 'gi|13434998|gb|AAK26104.1| SKP1-like protein ASK10 [Arabidopsis thaliana]' ----------------------------------------------------------------------------------------------------------------------------------------------------TRPGQRKVRLTSSDGETFEVERDVIALST-TLNTMMM-------------------DLGLDNADAEMDA-VPLQNVAGPILRKVLLWCTS-HKDDP-------------------PSADDD------------NREKRTDDIPSWDVEF-LK-V--DQGTLFELILAANYLDIKGLLDVTCKTV-----ANMIKGKTPEEIRRTFNIKNDFTPEEEEQ-IRRENAWCED------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [166] 'gi|66504030|ref|XP 392758.2| PREDICTED: similar to ENSANGP00000011120 [Apis mellifera]' ---------------------------------------------------------------------------------------------------------M-----------------------------------------------PNIKLQSSDGEVFEVDVDIAKCSV-TIKTMLE-------------------DLGMD--EDEEEV-VPLPNVNSAILRKVIQWATY-HKDDPP------------------PPEDDE------------NKEKRTDDISSWDADF-LK-V--DQGTLFELILAANYLDIKGLLDVTCKTV-----ANMIKGKTPEEIRKTFNIKNDFSASEEEQ-VRKENEWCEEK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [162] 'gi|66826197|ref|XP 646453.1| cytosolic glycoprotein FP21 [Dictyostelium discoideum] >gi|1706890|sp|P52285|FP21 DICDI Glycoprote' ---------------------------------------------------------------------------------------------------------M-----------------------------------------------SLVKLESSDEKVFEIEKEIACMSV-TIKNMIE-------------------DI-----GESDSP-IPLPNVTSTILEKVLDYCRH-HHQHPS------------------PQGDDK------------KDEKRLDDIPPYDRDF-CK-V--DQPTLFELILAANYLDIKPLLDVTCKTV-----ANMIRGKTPEEIRKIFNIKNDFTPEEEEQ-IRKENEWCEDKGGN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [162] 'gi|25777711|ref|NP 008861.2| S-phase kinase-associated protein 1A isoform a [Homo sapiens] >gi|19344004|gb|AAH25673.1| S-phase' ---------------------------------------------------------------------------------------------------------M-----------------------------------------------PSIKLQSSDGEIFEVDVEIAKQSV-TIKTMLE-------------------DLGMDD-EGDDDP-VPLPNVNAAILKKVIQWCTH-HKDDPP------------------PPEDDE------------NKEKRTDDIPVWDQEF-LK-V--DQGTLFELILAANYLDIKGLLDVTCKTV-----ANMIKGKTPEEIRKTFNIKNDFTEEEEAQ-V-GSTQFCL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [160] 'gi|66822943|ref|XP 644826.1| cytosolic glycoprotein FP21 [Dictyostelium discoideum] >gi|66822139|ref|XP 644424.1| hypothetical' ---------------------------------------------------------------------------------------------------------M-----------------------------------------------SLVKLESSDEKVFEIEKEIACMSV-TIKNMIE-------------------DI-----GESDAP-IPLPNVTSTILEKVLDYCRH-HHQHPS------------------PQGDDK------------KDEKRLDDIPPYDRDF-CK-V--DQPTLFELILAANYLDIKPLLDVTCKTV-----ANMIRGKTPEEIRKIFNIKNDFTPEEEEQ-IRKENEWCEDKGGN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [162] 'gi|50899302|ref|XP 450439.1| putative SKP1 [Oryza sativa (japonica cultivar-group)] >gi|49388750|dbj|BAD25950.1| putative SKP1' ---------------------------------------------------------------------------------------------------------M---------------------------------AASAAAADGAADGEKMILLISSDGAKFELSEAAASLSK-TLGNMIE-------------------D------DCATNGAIPLANVASDILAKVVEYCNK-HAAATA-------------------------------TATAAAKASGEEELSKFDAEF-VS-V--DRKKLFGLINAANFLNMPCLLELTCQRA-----ADLIKDMMPEQVREVFGIENDFTPEEEAE-VRNENAWAYEM------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [172] 'gi|73948993|ref|XP 535176.2| PREDICTED: similar to S-phase kinase-associated protein 1A isoform b [Canis familiaris]' ------------------------MAEKWKGLLSSPIDEQDNCNHSCNEYGEQMPGLCSLSQDRPHCIHRDQFITRPCSLCLSPGWQGCSALVSLQPAVGLRQSTM-----------------------------------------------PSIKLQSSDGEIFEVDIEIAKQSV-TIKTMLE-------------------DLGMND-EGDDDP-VPLSNVNAAILKKIIQWYTH-HKDDSP------------------PPEDDE------------NKEKRADDIPVWDQEF-LK-V--DQGTLVELILAANYLDIKGLLDVTCKTV-----ANMIKGKTPEEIRKTFNIKNDFTEEEEAQ-VHKENQWCEEKLDVMPDTVTL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [254] 'gi|54640549|gb|EAL29385.1| GA14255-PA [Drosophila pseudoobscura]' ---------------------------------------------------------------------------------------------------------M-----------------------------------------------PNIKLQSSDEEIFDTDIQIAKCSG-TIKTMLE-------------------DCGME--DDENAI-VPLPNVNSTILRKVLTWAHY-HKDDPQ------------------PTEDDE------------SKEKRTDDIISWDADF-LK-V--DQGTLFELILAANYLDIKGLLELTCRTV-----ANMIKGKTPEEIRKTFNIKKDFTPAEEEQ-VRKENEWCEEK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [162] 'gi|55628664|ref|XP 519127.1| PREDICTED: similar to S-phase kinase-associated protein 1A isoform b; organ of Corti protein 2; tr' ---------------------------------------------------------------------------------------------------------M-----------------------------------------------PSIQLQSFDGEIFAVDVEIAKQSV-TIKTTLE-------------------DLGMDD-EG-DDP-VPLPNVNAAVLKKVIQWCTH-HKDDPP------------------PPEDDE------------NKEKQTDDIPVWDQEF-LK-V--AQGTLFELILAANYLDIKGLLDVTCKTV-----ANMIKGKTPEEIRKTFNIKNDLTEEEEAQ-VRKENQWCEEK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [162] 'gi|18399260|ref|NP 565467.1| MEO (MEIDOS); ubiquitin-protein ligase [Arabidopsis thaliana] >gi|4580458|gb|AAD24382.1| E3 ubiqui' ---------------------------------------------------------------------------------------------------------M---------------------------------------------SSKKIVLTSSDDECFEIDEAVARKMQ-MVAHMID-------------------D------DCADKA-IRLQNVTGKILAIIIEYCKK-HVDDV----------------------------------------EAKNEFVTWDAEF-VKNI--DMDTLFKLLDAADYLIVIGLKNLIAQAI-----ADYTADKTVNEIRELFNIENDYTPEEEEE-LRKKNEWAFN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [150] 'gi|50543590|ref|XP 499961.1| hypothetical protein [Yarrowia lipolytica] >gi|49645826|emb|CAG83890.1| unnamed protein product [Y' ---------------------------------------------------------------------------------------------------------M-------------------------------------------------VTLVSSDGVSFNVDQKVASRSA-LIKNMME-------------------D------IGEDAGEIPVPNVSSNVLKKVIEYCTY-HKDDPL------------------PQSGED-------EGTSAADKKKSTVIDDWDYNF-LQ-V--DQEMLFEIILTANYLDIKPLLDVGCKTV-----ANMIKGKTPEEIRRTFNIANDFTPEEEAQ-IRRENEWAEDR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [162] 'gi|29841010|gb|AAP06023.1| similar to NM 003197 transcription elongation factor B polypeptide 1-like [Schistosoma japonicum]' ---------------------------------------------------------------------------------------------------------M-----------------------------------------------PSIKLASSDGEVFDIDVAIAKQSV-TIKTMLD-------------------DLGIEE-QGDEEP-VPLPNVNAGILRKVIQWCTY-HKDDPP------------------PQEDDE------------NKERRTDDIPSWDQEF-LR-V--DQGTLFELMLAANYLDIRGLLDVCCKTV-----ANMIKGKTPEEIRKTFNIKCDFTPQEEEQ-VKKENEWCEEK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ [163] 'gi|38048021|gb|AAR09913.1| similar to Drosophila melanogaster skpA [Drosophila yakuba]' ---------------------------------------------------------------------------------------------------------M-----------------------------------------------PSIKLQSSDEEIFDTDIQIAKCSG-TIKTMLE-------------------DCGME--DDENAI-VPLPNVNSTILRKVLTWAHY-HKDDPQ------------------PSEDDE------------SKEKRTDDIISWDADF-LK-V--DQGTLFELILAANYLDIKGLLELTCKTV-----ANMIKGKTPEEIRKTFNIKKDFTPAEEEQ-VRKENEWC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- [159] ; END; BEGIN CODONS; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE=unord PolyTcount=MINSTEPS ; EXSET * UNTITLED = 1-155 175 178 186-204 206-218 239 241-287 298-304 333-337 363-648; END; BEGIN MacClade; Version 4.0 87; LastModified -1027453400; FileSettings editor '0' '0' '1' '1'; Singles 100; Editor 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