#NEXUS [MacClade 4.08 registered to Tomoaki Nishiyama, National Institute for Basic Biology] BEGIN DATA; DIMENSIONS NTAX=5 NCHAR=163; FORMAT DATATYPE=PROTEIN SYMBOLS = " 1 2 3 4" MISSING=? GAP=- ; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 ] [ . . . . . . . . . . . . . . . . ] 'gi|18412777|ref|NP 567147.1| AGG1 [Arabidopsis thaliana] >gi|30695797|ref|NP 850741.1| AGG1 [Arabidopsis thaliana] >gi|88010961' MR-----------------------------------------------EETVVY-EQEESVSHGGGKHRILAELARVEQEVAFL--EK-E-L-KEVENT-DIVS-TVCEELLSVI---E-KGPDPLLPLTNGPLNLGWDRWFEGPNGGEGCRCLIL------ [98] 'gi|7573325|emb|CAB87795.1| putative protein [Arabidopsis thaliana]' MEGKSRFESERERLRRQFKLVRTKTRLSLTLSDLRPASERM-------REETVVY-EQEESVSHGGGKHRILAELARVEQEVAFL--EK-E-L-KEVENT-DIVS-TVCEELLSVI---E-KGPDPLLPLTNGPLNLGWDRWFEGPNGGEGCRCLIL------ [138] 'gi|30695843|ref|NP 850746.1| AGG2 (G-PROTEIN GAMMA SUBUNIT 2) [Arabidopsis thaliana] >gi|88900340|gb|ABD57482.1| At3g22942 [Ara' ME----------------------------------AGSSNSSGQLSGR---VV-----DT--R--GKHRIQAELKRLEQEARFLEEEL-EQLEK----M-DNASASCKEFLDSV----DSK-PDPLLPETTGPVNATWDQWFEGPKEAKRCGCSIL------ [100] 'gi|46357950|dbj|BAD15277.1| heterotrimeric G protein gamma subunit 1 [Oryza sativa (japonica cultivar-group)]' MQ------------------------------------------AGGGGD--AG-----DT--R--GRHRIQAELKKLEQEARFLEEELEE-LDK----T-DKVS-AALQEL-MVT--AESK-ADPLLPVTTGPACQSWDRWFEGPQDLRRCKCWFL------ [93] 'gi|50905155|ref|XP 464066.1| unknown protein [Oryza sativa (japonica cultivar-group)] >gi|42409262|dbj|BAD10525.1| unknown prot' MRGEANGEEEQQPPRRNHLRDDAEEEEEVERRAARPVSGQQQQQQRR-RPTDVGGGAAMRS-VGYVGKHRLSAAIARLDQELQSLQDELNE-LE-----TMEPAS-AAC--Q-GVITSTEGK-SDPLLPVTIGPENASWERWFQRVRSSRSNKWWASKGSDFS [150] ; END; BEGIN CODONS; CODESET * UNTITLED = Universal: all ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE=unord PolyTcount=MINSTEPS ; EXSET * UNTITLED = 1-66 86-99 101 106-123 157-163; END; BEGIN MacClade; Version 4.0 87; LastModified -1021739869; FileSettings editor '0' '0' '1' '1'; Singles 100; Editor 00011001111111100100010010 '1' '8' Geneva '10' '340' '1' all; EditorPosition '111' '70' '387' '1363'; TreeWindowPosition '46' '6' '711' '974'; ListWindow Characters open Geneva '9' '50' '10' '273' '359' 000; ListWindow Taxa closed Geneva '9' '50' '10' '145' '490' 100000000; ListWindow Trees closed Geneva '9' '50' '10' '276' '490' ; ListWindow TypeSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow ExSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow CharSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow TaxSets closed Geneva '9' '50' '10' '276' '490' ; ListWindow CharPartitions closed Geneva '9' '50' '10' '276' '490' ; ListWindow CharPartNames closed Geneva '9' '50' '10' '276' '490' ; ListWindow WtSets closed Geneva '9' '50' '10' '276' '490' ; ChartWindowPosition '52' '30' '686' '964'; StateNamesSymbols closed Geneva '9' '10' '50' '30' '148' '220'; WindowOrder Data List Characters; OtherSymbols &/ 00 ?-; Correlation '0' '0' '1000' '0' '0' 10011010; Salmo 00000001; EditorFile '4'; ExportHTML _ MOSS '100' 110000; PrettyPrint 10; EditorToolsPosition '518' '69' '115' '165'; TreeWindowProgram 10; TreeWindow 0000; Continuous '0' '3' 1; Calculations 0000001; SummaryMode '0' '0' 0; Charts Geneva '9' (normal) 0010; NexusOptions '0' '0' '50' 001011001; TipLabel '1'; TreeFont Geneva '9' (normal); TreeShape 1.0 1.0 0100; TraceLabels 0101; ChartColors '0' '0' '65535' '9' '0' 1; ChartBiggestSpot 1; ChartPercent 10; ChartBarWidth '10' 1; ChartVerticalAxis 10101; ChartMinMax '0'; TraceAllChangesDisplay '1' 1; BarsOnBranchesDisplay '0' '0' '60000' '10000' '10000' '10000' '10000' '60000' '65000' '65000' '65000' '6' '1' 0000101; ContinuousBranchLabels 0; AllStatesBranchLabels 1; IndexNotation '2' 1; PrintTree 10.00 '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' Geneva '9' (normal) Geneva '10' (normal) Geneva '9' (normal) Geneva '9' (normal) Geneva '9' (bold ) Geneva '9' (normal) Geneva '9' (normal) '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '1' '1' '1' '1' '0' '256' '-39' '4' '-40' '0' '1' '2' '1' '8' '0' '0' '0' '2' 1000111000000000000100000111000; MatchChar 00 .; EntryInterpretation 01; ColorOptions 00; TreeTools '0' '5' '4' '0' '10' '4' '0' 00100111111101110; EditorTools '0' '0' '0' '1000' '0' '0' '6' '3' '1' 100010101110011; PairAlign '2' '2' '3' '2' '1' '1' '2' '1' '3' 1010; BothTools '1'; END;